BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048281
(660 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/611 (71%), Positives = 507/611 (82%), Gaps = 6/611 (0%)
Query: 15 FNFST-SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
FNFS+ S+ Q+F P+ L TCIASLQ AH NL KG+EIHSYML G ++SPLSITSL
Sbjct: 19 FNFSSISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSL 78
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
INMYSKC QM +AL +F++ + E NVF +NA+ISGF +N F +G +F+ MR GV+PD
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K+TFPC IK C DV LE+KKIHGL+FK GL+LDV+IGSALVN YLK ME A FE
Sbjct: 139 KFTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE 195
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
ELP+RDVVLWNAMVNGYAQIG+F LE FRRM+ E + SRFTVTGVLS +MG N
Sbjct: 196 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNN 255
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
GR++HG +KMGYDSGV V N+LIDMYGK KC+ +ALEIFEMM EKDIFSWNSI++VHEQ
Sbjct: 256 GRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
CG+HDGTLRL DRML AG QPDLVT +TVLPACSHLAALMHGR+IHGY++V+GL K+G
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG-- 373
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
KDIDDV + NA++DMY KCGSMRDA +VF +MS KDVASWNIMI+GYGM G G EAL+MF
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S MCE +LKPDEVTFVGVLSACSH+GF+SQGR FL M+S+Y V PTIEHYTCVIDMLGR
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGR 493
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AGQL+EAYELAL MP EANPVVWR LLAA RLH + LAE+AAQRVF+LEP HCG+YVLM
Sbjct: 494 AGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLM 553
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
SN+Y A G+YEEVL++RHTMRQQNVRK PGCSWIELK+G+H F+S+DR+HPEA SIYA L
Sbjct: 554 SNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGL 613
Query: 614 HSLTARLREHG 624
+SLTARLREHG
Sbjct: 614 NSLTARLREHG 624
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/611 (71%), Positives = 507/611 (82%), Gaps = 6/611 (0%)
Query: 15 FNFST-SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
FNFS+ S+ Q+F P+ L TCIASLQ AH NL KG+EIHSYML G ++SPLSITSL
Sbjct: 19 FNFSSISTAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSL 78
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
INMYSKC QM +AL +F++ + E NVF +NA+ISGF +N F +G +F+ MR GV+PD
Sbjct: 79 INMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPD 138
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K+TFPC IK C DV LE+KKIHGL+FK GL+LDV+IGSALVN YLK ME A FE
Sbjct: 139 KFTFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFE 195
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
ELP+RDVVLWNAMVNGYAQIG+F LE FRRM+ E + SRFTVTGVLS +MG N
Sbjct: 196 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNN 255
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
GR++HG +KMGYDSGV V N+LIDMYGK KC+ +ALEIFEMM EKDIFSWNSI++VHEQ
Sbjct: 256 GRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQ 315
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
CG+HDGTLRL DRML AG QPDLVT +TVLPACSHLAALMHGR+IHGY++V+GL K+G
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG-- 373
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
KDIDDV + NA++DMY KCGSMRDA +VF +MS KDVASWNIMI+GYGM G G EAL+MF
Sbjct: 374 KDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMF 433
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S MCE +LKPDEVTFVGVLSACSH+GF+SQGR FL M+S+Y V PTIEHYTCVIDMLGR
Sbjct: 434 SRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGR 493
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AGQL+EAYELAL MP EANPVVWR LLAA RLH + LAE+AAQRVF+LEP HCG+YVLM
Sbjct: 494 AGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLM 553
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
SN+Y A G+YEEVL++RHTMRQQNVRK PGCSWIELK+G+H F+S+DR+HPEA SIYA L
Sbjct: 554 SNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGL 613
Query: 614 HSLTARLREHG 624
+SLTARLREHG
Sbjct: 614 NSLTARLREHG 624
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/549 (71%), Positives = 457/549 (83%), Gaps = 5/549 (0%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MYSKC QM +AL +F++ + E NVF +NA+ISGF +N F +G +F+ MR GV+PDK+
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
TFPC IK C DV LE+KKIHGL+FK GL+LDV+IGSALVN YLK ME A FEEL
Sbjct: 61 TFPCAIKACLDV---LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P+RDVVLWNAMVNGYAQIG+F LE FRRM+ E + SRFTVTG+LS +MG NGR
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
++HG +KMGYDSGV V N+LIDMYGK KC+ +ALEIFEMM EKDIFSWNSI +VHEQCG
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+HDGTLRL DRML AG QPDLVT +TVLPACSHLAALMHGR+IHGY++V+GL K+G KD
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG--KD 295
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
IDDV + NA++DMY KCGSMRDA +VF +M KDVASWNIMI+GYGM G G EAL+MFS
Sbjct: 296 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSR 355
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
MCE +LKPDEVTFVGVLSACSH+GF+SQGR FL M+S+Y V PTIEHYTCVIDMLGRAG
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
QL+EAYELAL MP EANPVVWR LLAA RLH + LAE+AAQRVF+LEP HCG+YVLMSN
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 475
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
+Y A G+YEEVL++RHTMRQQNVRK PGCSWIELK+G+H F+S+DR+HPEA SIYA L+S
Sbjct: 476 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNS 535
Query: 616 LTARLREHG 624
LTARL EHG
Sbjct: 536 LTARLCEHG 544
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 142/286 (49%), Gaps = 13/286 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T L + A +L G+ IH + ++ G DS ++++ SLI+MY KC ++ AL +F
Sbjct: 159 TVTGILSVFAVMGDLNNGRIIHGFAMKMGY-DSGVAVSNSLIDMYGKCKCIEDALEIFEM 217
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E ++F++N++ S L + M G+ PD T ++ C + A++
Sbjct: 218 MR-EKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 276
Query: 153 VKKIHGLVFKLGL-----DL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
++IHG + GL D+ DV + +A+++ Y KC M +A VFE + +DV WN M
Sbjct: 277 GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIM 336
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ GY G ++ALE+F RM + + T GVLSA GF GR +K Y
Sbjct: 337 IMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA-QMKSKY 395
Query: 267 DSGVPV--MNALIDMYGKGKCVGEALEI-FEMMEEKDIFSWNSIMT 309
D + +IDM G+ + EA E+ M E + W +++
Sbjct: 396 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 441
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGI------IDSPLSITSLINMYSKCCQMKY 85
L T L C+H L G+EIH YM+ +G+ ID L ++I+MY+KC M+
Sbjct: 258 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 317
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF + +V ++N MI G+ + + + L+ F+ M ++ + PD+ TF ++ C
Sbjct: 318 AHLVFERMX-NKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 375
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/597 (65%), Positives = 477/597 (79%), Gaps = 2/597 (0%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ L TCIA+LQ CAH NL KG+E+H+++L+ SPL+ITSLINMYSKC + ++L V
Sbjct: 27 YDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRV 86
Query: 90 FN-NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
FN NVF YNA+I+GF +N + L +N MR LG+ PDK+TFPC+I+ C D
Sbjct: 87 FNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDD 146
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V KIHGL+FK+GL+LDV++GSALVNTYLK +F+ EA +VFEELP+RDVVLWNAMVN
Sbjct: 147 DGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVN 206
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+AQIG F +AL VFRRM G+ R+TVTGVLS +MG F NGR VHG V KMGY+S
Sbjct: 207 GFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYES 266
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
GV V NALIDMYGK KCVG+AL +FEMM+E DIFSWNSIM+VHE+CG+H GTLRLFDRM+
Sbjct: 267 GVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMM 326
Query: 329 -SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
S+ QPDLVT +TVLPAC+HLAALMHGR+IHGY+VVNGLAK S DDV +NNALMD
Sbjct: 327 GSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMD 386
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG+MRDA+MVF M +KDVASWNIMI GYGM G G EALD+FS MC+A++ P+E++
Sbjct: 387 MYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEIS 446
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVG+LSACSH+G + +G FL MES+YGV P+IEHYTCVIDML RAGQL EAY+L L M
Sbjct: 447 FVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTM 506
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P +A+PV WR+LLAA RLH +TDLAE+AA +V +LEP HCGNYVLMSN+Y G+YEEVL
Sbjct: 507 PFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVL 566
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ R+TM+QQNV+K PGCSWIEL +G+H FI+ DR+HP+ + IYA L+SLTA L+EHG
Sbjct: 567 EWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLTAVLQEHG 623
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 813 bits (2101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/534 (72%), Positives = 446/534 (83%), Gaps = 5/534 (0%)
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N+ + E NVF +NA+ISGF +N F +G +F+ MR GV+PDK+TFPC IK C DV
Sbjct: 96 NDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDV--- 152
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
LE+KKIHGL+FK GL+LDV+IGSALVN YLK ME A FEELP+RDVVLWNAMVNGY
Sbjct: 153 LEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGY 212
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQIG+F LE FRRM+ E + SRFTVTG LS +MG NGR++HG +KMGYDSGV
Sbjct: 213 AQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGV 272
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LIDMYGK KC+ +ALEIFEMM EKDIFSWNSI++VHEQCG+HDGTLRL DRML A
Sbjct: 273 AVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGA 332
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G QPDLVT +TVLPACSHLAALMHGR+IHGY++V+GL K+G KDIDDV + NA++DMY
Sbjct: 333 GIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDG--KDIDDVLLKNAVIDMYA 390
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGSMRDA +VF +MS KDVASWNIMI+GYGM G G EAL+MFS MCE +LKPDEVTFVG
Sbjct: 391 KCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 450
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH+GF+SQGR FL M+S+Y V PTIEHYTCVIDMLGRAGQL+EAYELAL MP E
Sbjct: 451 VLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 510
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
ANPVVWR LLAA RLH + LAE+AAQRVF+LEP HCG+YVLMSN+Y A G+YEEVL++R
Sbjct: 511 ANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVR 570
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
HTMRQQNVRK PGCSWIELK+G+H F+S+DR+HPEA SIYA L+SLTARL EHG
Sbjct: 571 HTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHG 624
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 144/286 (50%), Gaps = 13/286 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T L + A +L G+ IH + ++ G DS ++++ SLI+MY KC ++ AL +F
Sbjct: 239 TVTGXLSVFAVMGDLNNGRIIHGFAMKMGY-DSGVAVSNSLIDMYGKCKCIEDALEIFEM 297
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E ++F++N+++S L + M G+ PD T ++ C + A++
Sbjct: 298 MR-EKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH 356
Query: 153 VKKIHGLVFKLGL-----DL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
++IHG + GL D+ DV + +A+++ Y KC M +A VFE + +DV WN M
Sbjct: 357 GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIM 416
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ GY G ++ALE+F RM + + T GVLSA GF GR + +K Y
Sbjct: 417 IMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFL-VQMKSKY 475
Query: 267 DSGVPV--MNALIDMYGKGKCVGEALEI-FEMMEEKDIFSWNSIMT 309
D + +IDM G+ + EA E+ M E + W +++
Sbjct: 476 DVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGI------IDSPLSITSLINMYSKCCQMKY 85
L T L C+H L G+EIH YM+ +G+ ID L ++I+MY+KC M+
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF +S + +V ++N MI G+ + + + L+ F+ M ++ + PD+ TF ++ C
Sbjct: 398 AHLVFERMSNK-DVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/583 (64%), Positives = 458/583 (78%), Gaps = 3/583 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+ C+A LQ CA NL KG+++HS M+ G SP SITSLINMYSKC QM A+ VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ E NVF YNA+ISGF SN A KG F+ MR GV+PDKYTFPC+++ CC+VM
Sbjct: 70 YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVM-- 127
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
EVKKIHG + K+GL+LDV++GSALVNTYLK ME+A KVF EL +RDVVLWNAM+NGY
Sbjct: 128 -EVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGY 186
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+IG +ALEVFRRM +G+ SRFT+TG+LS G NG+ VHGIV+KMGYDSGV
Sbjct: 187 AKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGV 246
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NALIDMYGK K +G+AL IFEM+ EKDIFSWNSI++VHEQCG+HDGTLRLFD+ML +
Sbjct: 247 SVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGS 306
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G PDLVT +TVLPACSHLAALMHGR+IHGY+++NGL K+ +D++ ++NA+MDMY
Sbjct: 307 GILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYA 366
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGSM +A +F MSKKDVASWNIMI+GYGM G EAL MFS MCEA+ KP+EVT VG
Sbjct: 367 KCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVG 426
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSAC+H+GF+S GR FL MES +GV+PTIEHYTCVIDMLGRAG L +AYE+ MP +
Sbjct: 427 VLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQ 486
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
ANPVVWR LL A RLHGN +LAEIAA++V QLEP HCG+YVLMSN+Y G+YEEVL++R
Sbjct: 487 ANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVR 546
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
TM++QNV+K PGCSWIELKDG+H F + DR+H E ++ +L
Sbjct: 547 KTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSELNALTNQL 589
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/550 (67%), Positives = 445/550 (80%), Gaps = 1/550 (0%)
Query: 76 MYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MY+KC QM AL V N + NVF YNA+ISGF N GL + MRQ GVLPDK
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
YTFPCLIK C+VM V +VKKIHGLV KLGLDLD+Y+GS+LV++YLK + M+EA ++F+E
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P RDVVLWN+MVNGYAQIG F +AL V R MS+EG+ MS+FTV+GVLS G F NG
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R+VHG ++KMG+DS V V NALIDMYGK +CV +ALEIFE M EKDIFSWNSI++ +E C
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+HDGTLRLFDRML G Q DLVT +T+LPACSHLAAL+HGR+IHGY++VNG K+G +
Sbjct: 241 SDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESE 300
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
++ ++ NALMDMY KCGSMRDA MVF MS +D ASWNIMI+GYGM G G EAL MFS
Sbjct: 301 NMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFS 360
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
MC++ LKP+E+TFVGVL ACSH+GF+SQG +FL ME ++GVVPTI+HYTCVIDMLGRA
Sbjct: 361 DMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRA 420
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
GQL EAY+LA+ MP + NPVVWR LLAA +L+GN DLAE+AAQ+VF+L P HCGNYVLMS
Sbjct: 421 GQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLMS 480
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
N YVA G+Y+EVLDIRHTMRQQ+V+K PGCSWIELK+G++TFI+ DR+HPEA+ IY ELH
Sbjct: 481 NAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFINGDRNHPEARLIYPELH 540
Query: 615 SLTARLREHG 624
L A +REHG
Sbjct: 541 LLAAHIREHG 550
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 141/296 (47%), Gaps = 13/296 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T L + A + + G+ +H +M++ G DS +S+ +LI+MY KC + AL +F
Sbjct: 163 TVSGVLSVFAGRGDFDNGRLVHGFMIKMGF-DSCVSVCNALIDMYGKCRCVVDALEIFET 221
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ E ++F++N+++S L F+ M GV D T ++ C + A++
Sbjct: 222 MN-EKDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVH 280
Query: 153 VKKIHGLVFKLGLDLD--------VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
++IHG + G D + +AL++ Y KC M +A VF + RD WN
Sbjct: 281 GREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWN 340
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVK 263
M+ GY G ++AL +F M K G+ + T GVL A GF G + + + +K
Sbjct: 341 IMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELK 400
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHD 318
G + +IDM G+ + EA ++ M + + W +++ + GN D
Sbjct: 401 HGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVD 456
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS--------ITSLINMYSKCCQM 83
L T L C+H L G+EIH YM+ G + S I +L++MY+KC M
Sbjct: 262 LVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSM 321
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A VF N+S + ++N MI G+ + + + L F+ M + G+ P++ TF ++
Sbjct: 322 RDAGMVFYNMS-NRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLA 380
Query: 144 CCDVMAVLEVKKIHG-LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVV 201
C + + K G + K G+ + + +++ + +EEA K+ +P++ + V
Sbjct: 381 CSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPV 440
Query: 202 LWNAMV 207
+W A++
Sbjct: 441 VWRALL 446
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/554 (60%), Positives = 424/554 (76%), Gaps = 8/554 (1%)
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
M+ +G I P SITSLINMYS+C QM+ A+ VF + E NVF YNA+I+GF +N A
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAAD 60
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
G F+ MR +GV+PDK+TFPC+++ CC+ M EV+KIHG +FK+GL+L+V++GSALVN
Sbjct: 61 GFQFYKRMRSVGVMPDKFTFPCVVRACCEFM---EVRKIHGCLFKMGLELNVFVGSALVN 117
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
TYLK E+A KVFEELP RDVVLWNAM+NGY +IG +KA+ VF+RM +EGI +SRFT
Sbjct: 118 TYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFT 177
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
T +LS L MG NGR +HGIV KMGY S V V NALIDMYGK K +AL IFEM+
Sbjct: 178 TTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMIN 237
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
EKD+FSWNSI++ HEQC +HDGTLRLF +ML + PD++T + VLPACSHLAALMHGR+
Sbjct: 238 EKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGRE 297
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
IHGY++VNGL KN ++ DDV +NNA+MDMY KCG M++A ++F M KDVASWNIMI
Sbjct: 298 IHGYMIVNGLGKN---ENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMI 354
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
+GY M G G EALDMF MCEA++KPD VTFVGVLSACSH+GF+ QGR FL ME +GV
Sbjct: 355 MGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGV 414
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
+PTIEHYTC+IDMLGRAG L EAY+LA +P E N ++W LL A RLHGN +L + +
Sbjct: 415 IPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGE 474
Query: 538 RVFQLEPGHC--GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
++ QLEP HC G+Y+LMS++Y G+YEE L++R TM++QNV+K PGCSWIELKDGL+
Sbjct: 475 KITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYV 534
Query: 596 FISSDRSHPEAKSI 609
F DR+H E ++
Sbjct: 535 FSMGDRTHHELNAL 548
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 14/293 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L + ++ G+ IH + + G +LI+MY KC + AL +F +
Sbjct: 177 TTTSILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMI 236
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E ++F++N++IS D L F M VLPD T ++ C + A++
Sbjct: 237 N-EKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHG 295
Query: 154 KKIHGLVFKLGLDL-----DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++IHG + GL DV + +A+++ Y KC M+ A +F+ + +DV WN M+
Sbjct: 296 REIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIM 355
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GYA G +AL++F RM + I T GVLSA GF GR + +M +
Sbjct: 356 GYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGR---SFLTRMELEF 412
Query: 269 GV-PVM---NALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
GV P + +IDM G+ +GEA ++ + + E ++ W +++ GN
Sbjct: 413 GVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGN 465
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/623 (54%), Positives = 447/623 (71%), Gaps = 15/623 (2%)
Query: 8 INPFSSCFNFSTSSGNQTFNHP-----FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG 62
INP + +ST SG Q HP +AT IA+LQ CA + + GQ+IH +M+R G
Sbjct: 31 INPSTFASLYSTVSG-QIEEHPKRYEHHNVATSIATLQRCAQRKDSVSGQQIHGFMVRKG 89
Query: 63 IID-SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
+D SP ++TSL+NMY+KC M+ A+ VF E +VF YNA+ISGF N +D
Sbjct: 90 FLDDSPRAVTSLVNMYAKCGLMRRAVLVFGG--SERDVFGYNALISGFVVNGSPLDAMDM 147
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ MR G+LPDKYTFP L+K D M V +VKK+H L FKLG D Y+GSALV +Y K
Sbjct: 148 YREMRAKGILPDKYTFPSLLKGS-DAMEVSDVKKVHALAFKLGFVSDCYVGSALVTSYSK 206
Query: 182 CQFMEEALKVFEELPLRD-VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
+E+A KVF+ELP RD VLWNA+VNGY+ I F AL VF +M +EG+ MSR T+T
Sbjct: 207 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEGVAMSRHTITS 266
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VLS+ + G NGR +HG+ VKMG+DSG+ V NALID+YGK K + EA IFE M+E+D
Sbjct: 267 VLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERD 326
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+F+WNS++ VH+ CG+HDGTL LF+ ML +G +PD+VT +TVLP C LA+L GR+IHG
Sbjct: 327 LFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHG 386
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y++ +GL S F++N+LMDMY KCG +RDA+MVF M KD ASWNIMI GY
Sbjct: 387 YMIASGLLNRKSSNG----FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 442
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G+ G+ ALDMFSCMC A +KPDE+TFVG+L ACSHSGF+++GR FL ME+ Y ++PT
Sbjct: 443 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPT 502
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+HY CVIDMLGRA +L EAY+LA++MP NPVVWR++L++ RLHGN DLA +A +R++
Sbjct: 503 SDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRLY 562
Query: 541 QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+LEP HCG YVLMSN+YV KYEEVLD+R TM++QNV+K PGCSWI L++G+HTF + D
Sbjct: 563 ELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIGLQNGVHTFFTGD 622
Query: 601 RSHPEAKSIYAELHSLTARLREH 623
++HPE +SI+ L L + + H
Sbjct: 623 QTHPEFESIHGWLSLLISHMHGH 645
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/623 (54%), Positives = 444/623 (71%), Gaps = 14/623 (2%)
Query: 8 INPFSSCFNFSTSSGNQTFNHP-----FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG 62
I P S+ + ++ Q +P +ATCIA+LQ CA + + GQ+IH +M+R G
Sbjct: 31 IKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKG 90
Query: 63 IID-SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
+D SP + TSL+NMY+KC M+ A+ VF E +VF YNA+ISGF N ++
Sbjct: 91 FLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG--SERDVFGYNALISGFVVNGSPLDAMET 148
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ MR G+LPDKYTFP L+K D M + +VKK+HGL FKLG D D Y+GS LV +Y K
Sbjct: 149 YREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 182 CQFMEEALKVFEELPLRD-VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
+E+A KVF+ELP RD VLWNA+VNGY+QI F AL VF +M +EG+ +SR T+T
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VLSA + G NGR +HG+ VK G S + V NALIDMYGK K + EA IFE M+E+D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+F+WNS++ VH+ CG+HDGTL LF+RML +G +PD+VT +TVLP C LA+L GR+IHG
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y++V+GL S + F++N+LMDMY KCG +RDA+MVF M KD ASWNIMI GY
Sbjct: 388 YMIVSGLLNRKSSNE----FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G+ G+ ALDMFSCMC A +KPDE+TFVG+L ACSHSGFL++GR FL ME+ Y ++PT
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPT 503
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+HY CVIDMLGRA +L EAYELA++ P NPVVWR++L++ RLHGN DLA +A +R+
Sbjct: 504 SDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 541 QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+LEP HCG YVLMSN+YV GKYEEVLD+R MRQQNV+K PGCSWI LK+G+HTF + +
Sbjct: 564 ELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGN 623
Query: 601 RSHPEAKSIYAELHSLTARLREH 623
++HPE KSI+ L + + + H
Sbjct: 624 QTHPEFKSIHDWLSLVISHMHGH 646
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/589 (37%), Positives = 357/589 (60%), Gaps = 9/589 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ ++ C Q++LQ G+++H ++ G + T+L +MY+KC ++ A VF+ +
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP- 182
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ +V ++NA+I+G+ N ++ L F+ M+ G+ P+ T ++ C ++A+ + K+
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ 242
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH + G++ DV + + LVN Y KC + A K+FE +P+RDV WNA++ GY+ +
Sbjct: 243 IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQ 302
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
H+AL F RM GI + T+ VL A + + G+ +HG ++ G++S V NA
Sbjct: 303 HHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA 362
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L++MY K V A ++FE M +K++ +WN+I++ + Q G+ L LF M + G +PD
Sbjct: 363 LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPD 422
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+VLPAC+H AL G+QIHGY + +G N V + L+D+Y KCG++
Sbjct: 423 SFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESN--------VVVGTGLVDIYAKCGNV 474
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
AQ +F +M ++DV SW MIL YG+ G G++AL +FS M E K D + F +L+AC
Sbjct: 475 NTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTAC 534
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + QG ++ M+S YG+ P +EHY C++D+LGRAG L+EA + M E + V
Sbjct: 535 SHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV 594
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL A R+H N +L E AA+ +F+L+P + G YVL+SNIY ++E+V +R M++
Sbjct: 595 WGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKE 654
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V+K PGCS + + + TF+ DR+HP+++ IYA L L ++R+ G
Sbjct: 655 KGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAG 703
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 239/443 (53%), Gaps = 10/443 (2%)
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F N + I G+ N F K L + M++ G+ PDK F +IK C
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +K+H + G + DV +G+AL + Y KC +E A +VF+ +P RDVV WNA++ G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+Q G+ ++AL +F M GI + T+ V+ + + G+ +H ++ G +S
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V+N L++MY K V A ++FE M +D+ SWN+I+ + H L F+RM
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P+ +T +VLPAC+HL AL G+QIHGY + +G N DV + NAL++MY
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN-------DV-VGNALVNMY 367
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG++ A +F +M KK+V +WN +I GY G EAL +F M +KPD V
Sbjct: 368 AKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIV 427
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL AC+H L QG++ + R G + T ++D+ + G +N A +L MP
Sbjct: 428 SVLPACAHFLALEQGKQ-IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP- 485
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
E + V W T++ A +HG+ + A
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDA 508
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 211/390 (54%), Gaps = 17/390 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T ++ + +CAH L++G++IH Y +R+GI L + L+NMY+KC + A +F
Sbjct: 222 STLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFER 281
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V ++NA+I G+ N + L FFN M+ G+ P+ T ++ C + A+ +
Sbjct: 282 MPIR-DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQ 340
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++IHG + G + + +G+ALVN Y KC + A K+FE +P ++VV WNA+++GY+Q
Sbjct: 341 GQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQ 400
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G H+AL +F M +GI F + VL A + G+ +HG ++ G++S V V
Sbjct: 401 HGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVV 460
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
L+D+Y K V A ++FE M E+D+ SW +++ + G+ + L LF +M G
Sbjct: 461 GTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGT 520
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN-GLA---KNGSCKDIDDVFMNNALMDM 388
+ D + F+ +L ACSH + G Q + + GLA ++ +C L+D+
Sbjct: 521 KLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYAC-----------LVDL 569
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ G + +A + MS + D W ++
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALL 599
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 362/624 (58%), Gaps = 14/624 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+L K R+ N G + ++ F LQ CA +L++G+E+H+ +L+
Sbjct: 70 ILCKQGRLKEALGILNTMILQGTRVYSDVFR-----GLLQECARLRSLEQGREVHAAILK 124
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
+GI + +L++MY+KC + A VF+ + + N+ ++ AMI F + + +
Sbjct: 125 SGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIR-DRNIVSWTAMIEAFVAGNQNLEAYK 183
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
+ M+ G PDK TF L+ + + +K+H + K GL+L+ +G++LV Y
Sbjct: 184 CYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYA 243
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
KC + +A +F++LP ++VV W ++ GYAQ G+ ALE+ +M + + ++ T T
Sbjct: 244 KCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTS 303
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+L ++G+ VH +++ GY + V+NALI MY K + EA ++F + +D
Sbjct: 304 ILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRD 363
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ +W +++T + Q G HD + LF RM G +PD +TF++ L +CS A L G+ IH
Sbjct: 364 VVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQ 423
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
+V G + DV++ +AL+ MY KCGSM DA++VF +MS+++V +W MI G
Sbjct: 424 QLVHAGYSL--------DVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGC 475
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G+ +EAL+ F M + +KPD+VTF VLSAC+H G + +GR+ M YG+ P
Sbjct: 476 AQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPM 535
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+EHY+C +D+LGRAG L EA + L MP + P VW LL+A R+H + + E AA+ V
Sbjct: 536 VEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVL 595
Query: 541 QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+L+P G YV +SNIY A G+YE+ +R M +++V K PG SWIE+ +H F D
Sbjct: 596 KLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVED 655
Query: 601 RSHPEAKSIYAELHSLTARLREHG 624
+SHPEAK IYAEL LT +++E G
Sbjct: 656 KSHPEAKEIYAELGKLTEQIKEQG 679
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 342/585 (58%), Gaps = 12/585 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ+C +++ G +H+ ++ G T+L+NMY+K +++ + VFN ++ E N
Sbjct: 178 LQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVN 236
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NAMI+GF SND D F M GV PD TF + K + V + K++ G
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEF 216
+LG+D + +G+AL++ KC ++EA +F + R WNAM++GY + G
Sbjct: 297 YALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFN 356
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNA 275
KALE+F +M + I++ +T V +A+ + G+ VH +K G + V + NA
Sbjct: 357 EKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNA 416
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+ + Y K + + ++F ME++D+ SW S++T + QC D + +F M + G P+
Sbjct: 417 VANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPN 476
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TFS+VL +C++L L +G+Q+HG I GL D+D + +AL+DMY KCG +
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGL-------DMDKC-IESALVDMYAKCGCL 528
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA+ VF ++S D SW +I G+ G +AL +F M + ++P+ VTF+ VL AC
Sbjct: 529 GDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFAC 588
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH G + +G ++ LM+ YG+VP +EHY C++D+L R G LN+A E MP E N +V
Sbjct: 589 SHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMV 648
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W+TLL A R+HGN +L E+AAQ++ + + YVL+SN Y+ G Y++ L +RH M++
Sbjct: 649 WQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKE 708
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
Q V+K PGCSWI + LH F + D+ HPE IYA+L L +L
Sbjct: 709 QGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKL 753
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 259/512 (50%), Gaps = 16/512 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
L+ C L++ + +H ++L++ + S + + + + YSKC + A +F+ +S +
Sbjct: 75 LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMS-Q 133
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N F++ +I+G N G +FF M+ G+ PD++ + +++ C + ++ +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + G ++ +AL+N Y K Q +E++ KVF + +VV WNAM+ G+ +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A ++F RM EG+ T GV A+ M+ + V G +++G DS V AL
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS--WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
IDM K + EA IF F+ WN++++ + + G ++ L LF +M
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D T+ +V A + L L G+++H + +GL +++ V ++NA+ + Y KCGS
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL-------EVNYVSISNAVANAYAKCGS 426
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ D + VF +M +D+ SW ++ Y + +A+++FS M + P++ TF VL +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C++ L G++ ++ + G+ + ++DM + G L +A ++ + N A+ V
Sbjct: 487 CANLCLLEYGQQVHGII-CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISN-ADTV 544
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQL--EP 544
W ++A HG D A +R+ QL EP
Sbjct: 545 SWTAIIAGHAQHGIVDDALQLFRRMVQLGVEP 576
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 13/387 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLD--LDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
L++ C D + + K +HG + K + + + + + Y KC ++ A ++F+++
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+ W ++ G A+ G F E F M +GI+ +F +G+L I + + G +V
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +V G+ S V AL++MY K + + ++ ++F M E ++ SWN+++T +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
LF RM+ G PD TF V A L + +++ GY + G+ N
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN------- 306
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ AL+DM +KCGS+++A+ +F ++ + A WN MI GY G ++AL++F+
Sbjct: 307 -TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAK 365
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
MC+ + D T+ V +A + LS G++ V + V + + G
Sbjct: 366 MCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCG 425
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAA 522
L + ++ M + + + W +L+ A
Sbjct: 426 SLEDVRKVFNRMEDR-DLISWTSLVTA 451
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 342/585 (58%), Gaps = 12/585 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ+C +++ G +H+ ++ G T+L+NMY+K +++ + VFN ++ E N
Sbjct: 178 LQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMT-EVN 236
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NAMI+GF SND D F M GV PD TF + K + V + K++ G
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEF 216
+LG+D + +G+AL++ KC ++EA +F + R WNAM++GY + G
Sbjct: 297 YALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFN 356
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNA 275
KALE+F +M + I++ +T V +A+ + G+ VH +K G + V + NA
Sbjct: 357 EKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNA 416
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+ + Y K + + ++F ME++D+ SW S++T + QC D + +F M + G P+
Sbjct: 417 VANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPN 476
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TFS+VL +C++L L +G+Q+HG I GL D+D + +AL+DMY KCG +
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQQVHGIICKVGL-------DMDKC-IESALVDMYAKCGCL 528
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA+ VF ++S D SW +I G+ G +AL +F M + ++P+ VTF+ VL AC
Sbjct: 529 GDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFAC 588
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH G + +G ++ LM+ YG+VP +EHY C++D+L R G LN+A E MP E N +V
Sbjct: 589 SHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMV 648
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W+TLL A R+HGN +L E+AAQ++ + + YVL+SN Y+ G Y++ L +RH M++
Sbjct: 649 WQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKE 708
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
Q V+K PGCSWI + LH F + D+ HPE IYA+L L +L
Sbjct: 709 QGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKL 753
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 259/512 (50%), Gaps = 16/512 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
L+ C L++ + +H ++L++ + S + + + + YSKC + A +F+ +S +
Sbjct: 75 LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMS-Q 133
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N F++ +I+G N G +FF M+ G+ PD++ + +++ C + ++ +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + G ++ +AL+N Y K Q +E++ KVF + +VV WNAM+ G+ +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A ++F RM EG+ T GV A+ M+ + V G +++G DS V AL
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS--WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
IDM K + EA IF F+ WN++++ + + G ++ L LF +M
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D T+ +V A + L L G+++H + +GL +++ V ++NA+ + Y KCGS
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHARAIKSGL-------EVNYVSISNAVANAYAKCGS 426
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ D + VF +M +D+ SW ++ Y + +A+++FS M + P++ TF VL +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C++ L G++ ++ + G+ + ++DM + G L +A ++ + N A+ V
Sbjct: 487 CANLCLLEYGQQVHGII-CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISN-ADTV 544
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQL--EP 544
W ++A HG D A +R+ QL EP
Sbjct: 545 SWTAIIAGHAQHGIVDDALQLFRRMVQLGVEP 576
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 13/387 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLD--LDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
L++ C D + + K +HG + K + + + + + Y KC ++ A ++F+++
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+ W ++ G A+ G F E F M +GI+ +F +G+L I + + G +V
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +V G+ S V AL++MY K + + ++ ++F M E ++ SWN+++T +
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
LF RM+ G PD TF V A L + +++ GY + G+ N
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN------- 306
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ AL+DM +KCGS+++A+ +F ++ + A WN MI GY G ++AL++F+
Sbjct: 307 -TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAK 365
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
MC+ + D T+ V +A + LS G++ V + V + + G
Sbjct: 366 MCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCG 425
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAA 522
L + ++ M + + + W +L+ A
Sbjct: 426 SLEDVRKVFNRMEDR-DLISWTSLVTA 451
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/583 (36%), Positives = 340/583 (58%), Gaps = 11/583 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C +L+ G+++H+ ++RTG + +L++MYSK ++ A VF +
Sbjct: 206 SCV--VNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKV 263
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++NA ISG + L+ M+ G++P+ +T ++K C A
Sbjct: 264 P-ETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLG 322
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D YI LV+ Y K +++A KVF+ +P RD+VLWNA+++G +
Sbjct: 323 RQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHG 382
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +AL +F RM KEG ++R T+ VL + + + R VH + K+G+ S V+
Sbjct: 383 AQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVV 442
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N LID Y K C+ A +FE DI ++ S++T QC + + ++LF ML G
Sbjct: 443 NGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLD 502
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD S++L AC+ L+A G+Q+H +++ + DVF NAL+ Y KCG
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--------MSDVFAGNALVYTYAKCG 554
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA + F+ + +K V SW+ MI G G GK ALD+F M + + P+ +T VL
Sbjct: 555 SIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLC 614
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+H+G + + + + M+ +G+ T EHY C+ID+LGRAG+L++A EL +MP + N
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNA 674
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LLAASR+H + +L +AA+++F LEP G +VL++N Y + G +++V +R M
Sbjct: 675 AVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLM 734
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
+ V+K P SW+ELKD +HTFI D+SHP A+ IYA+L L
Sbjct: 735 KDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDEL 777
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 229/498 (45%), Gaps = 12/498 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++H+ + TG+ +L+ MY + A VF+ CE N ++N ++S +
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
ND + F M GV P+++ F C++ C + +K+H +V + G D DV+
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ALV+ Y K + A VF ++P DVV WNA ++G G ALE+ +M G
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + FT++ +L A G F GR +HG +VK DS + L+DMY K + +A
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ + ++D+ WN++++ H L LF RM GF + T + VL + + L
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
A+ RQ+H G + D + N L+D Y KC + A VF K D+
Sbjct: 419 AISDTRQVHALAEKLGF--------LSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDI 470
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
++ MI G++A+ +F M L PD +L+AC+ QG++
Sbjct: 471 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ R + + ++ + G + +A +LA + E V W ++ HG+
Sbjct: 531 LIKRQ-FMSDVFAGNALVYTYAKCGSIEDA-DLAFSGLPEKGVVSWSAMIGGLAQHGHGK 588
Query: 531 LAEIAAQRVF--QLEPGH 546
A R+ + P H
Sbjct: 589 RALDVFHRMVDEHISPNH 606
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 185/376 (49%), Gaps = 20/376 (5%)
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++L+ IH + K GL + L++ Y KC+ A +VF+E+P V W+++V
Sbjct: 19 SLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLVT 76
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y+ AL FR M + + F + VL GF G +H + + G
Sbjct: 77 AYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGF---GTQLHALAMATGLGG 133
Query: 269 GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V NAL+ MYG V EA +F E E++ SWN +M+ + + +++F M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G QP+ FS V+ AC+ L GR++H ++ G K DVF NAL+D
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDK--------DVFTANALVD 245
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+K G +R A +VF K+ + DV SWN I G + G + AL++ M + L P+ T
Sbjct: 246 MYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELAL 505
+L AC+ SG + GR+ M ++Y ++DM + G L++A ++
Sbjct: 306 LSSILKACAGSGAFNLGRQIHGFM---VKANADSDNYIAFGLVDMYAKHGLLDDAKKVFD 362
Query: 506 AMPNEANPVVWRTLLA 521
+P + + V+W L++
Sbjct: 363 WIP-QRDLVLWNALIS 377
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 191/389 (49%), Gaps = 12/389 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L+ CA G++IH +M++ L++MY+K + A V
Sbjct: 304 FTLSSI---LKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + + ++ +NA+ISG + L F MR+ G ++ T ++K + A
Sbjct: 361 FDWIP-QRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +++H L KLG D ++ + L+++Y KC + A +VFE+ D++ + +M+
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITA 479
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+Q A+++F M ++G+ F ++ +L+A + ++ G+ VH ++K + S
Sbjct: 480 LSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V NAL+ Y K + +A F + EK + SW++++ Q G+ L +F RM+
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD 599
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ +T ++VL AC+H + ++ N + + + ++ + ++D+
Sbjct: 600 EHISPNHITMTSVLCACNHAGLVDEAKRY-----FNSMKEMFGIERTEEHYA--CMIDLL 652
Query: 390 TKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ G + DA + M + + A W ++
Sbjct: 653 GRAGKLDDAMELVNSMPFQTNAAVWGALL 681
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 505 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADL 561
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F+ L E V +++AMI G + + LD F+ M + P+ T ++ C
Sbjct: 562 AFSGLP-EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620
Query: 149 AVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
V E K+ + + G++ + +++ + +++A+++ +P + + +W A+
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680
Query: 207 V 207
+
Sbjct: 681 L 681
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 338 TFSTVLPACSHLAA---LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ T+ P + AA L+ G IH +++ +GL VF N+ L+ Y+KC
Sbjct: 3 SLETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA---------VFRNH-LLSFYSKCRL 52
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
A+ VF ++ SW+ ++ Y + ++AL F M ++ +E VL
Sbjct: 53 PGSARRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKC 112
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+GF +Q L + G+ I ++ M G G ++EA + E N V
Sbjct: 113 APDAGFGTQ----LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTV 168
Query: 515 VWRTLLAA 522
W L++A
Sbjct: 169 SWNGLMSA 176
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 353/596 (59%), Gaps = 14/596 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + L++C+ +Q G+ IH ++++ G + +T L++MY+KC + A F+
Sbjct: 163 FTLGSV---LRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFL 219
Query: 90 FNNLSCE-PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F L + N + AM++G+ N +K ++FF +M GV ++YTFP ++ C V+
Sbjct: 220 FKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A +++HG + K G +VY+ SALV+ Y KC ++ A + E + DVV WN+++
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 339
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ + G +AL +F+ M + + +T VL+ ++ N + VHG+++K G+++
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFEN 397
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V NAL+DMY K + A +FE M EKD+ SW S++T + Q +H+ +L++F M
Sbjct: 398 YKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMR 457
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G PD +++L AC+ L L G+Q+H + +GL + S + N+L+ M
Sbjct: 458 VTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS--------VYNSLVAM 509
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + DA +F M KDV +W +I+GY +G+G+ +L + M + +PD +TF
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+G+L ACSH+G + +GR++ M YG+ P EHY C+ID+ GR+G+L+EA +L M
Sbjct: 570 IGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD 629
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VW++LL+A R+H N +LAE AA +F+LEP + YV++SN+Y A K+ +V
Sbjct: 630 VKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAK 689
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR M+ + + K PGCSW+E+ ++TFIS DR HP IY ++ + R++E G
Sbjct: 690 IRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAG 745
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 241/462 (52%), Gaps = 17/462 (3%)
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
S ++I+ Y ++ A +F+ SC+ ++ T++++ISG+ + D F MR
Sbjct: 98 SWNTMISSYVNVGRLVEARELFDGCSCKSSI-TWSSIISGYCKFGCKVEAFDLFRSMRLE 156
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G ++T +++ C + + + IHG V K G + +V++ + LV+ Y KC+ + EA
Sbjct: 157 GWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEA 216
Query: 189 LKVFE--ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+F+ E ++ VLW AMV GYAQ G+ +KA+E FR M +G+ +++T +L+A
Sbjct: 217 EFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACS 276
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ G VHG +VK G+ S V V +AL+DMY K + A + E ME+ D+ SWNS
Sbjct: 277 SVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNS 336
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+M + G + LRLF M + D TF +VL C + ++ + +HG I+ G
Sbjct: 337 LMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTG 394
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
++NAL+DMY K G M A VF KM +KDV SW ++ GY +
Sbjct: 395 FENYK--------LVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH 446
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYT 485
+E+L +F M + PD+ +LSAC+ L G++ L ++S G+ + Y
Sbjct: 447 EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS--GLRWSQSVYN 504
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ M + G L++A + ++M + + + W ++ +G
Sbjct: 505 SLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAIIVGYAQNG 545
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/396 (29%), Positives = 189/396 (47%), Gaps = 63/396 (15%)
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF----- 223
+Y + L+N K + +A K+F+++P +D WN M++ Y +G +A E+F
Sbjct: 65 IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSC 124
Query: 224 --------------------------RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R M EG S+FT+ VL +G + G ++
Sbjct: 125 KSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMI 184
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCG 315
HG VVK G++ V V+ L+DMY K KCV EA +F+ +E K+ W +++T + Q G
Sbjct: 185 HGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNG 244
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + F M + G + + TF T+L ACS + A G Q+HG+IV +G N
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN----- 299
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
V++ +AL+DMY KCG +++A+ + M DV SWN +++G+ G +EAL +F
Sbjct: 300 ---VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKN 356
Query: 436 MCEAKLKPDEVTFVGVLSAC---------SHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
M +K D+ TF VL+ C H + G E L+ +
Sbjct: 357 MHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSN------------A 404
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++DM + G ++ AY + M E + + W +L+
Sbjct: 405 LVDMYAKTGDMDCAYTVFEKML-EKDVISWTSLVTG 439
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 33/184 (17%)
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI------------------- 417
+ ++ N L++ +K G + DA+ +F KM +KD SWN MI
Sbjct: 63 ESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGC 122
Query: 418 ------------LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
GY G EA D+F M K + T VL CS G + G
Sbjct: 123 SCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTG- 181
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASR 524
E + + G + T ++DM + ++EA L + + N V+W ++
Sbjct: 182 EMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYA 241
Query: 525 LHGN 528
+G+
Sbjct: 242 QNGD 245
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/625 (35%), Positives = 359/625 (57%), Gaps = 15/625 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+L K R+ N G + ++ F LQ CA +L++G+E+H+ +L+
Sbjct: 21 VLCKTGRLKEALGIMNTMILQGTRVYSDVFR-----GLLQECARLRSLEQGREVHAAILK 75
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
+GI + +L++MY+KC + A VF+++ + N+ ++ AMI F + + +
Sbjct: 76 SGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIR-DRNIVSWTAMIEAFVAGNKNLEAFK 134
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
+ M+ G PDK TF L+ + + +K+H + + GL+L+ +G++LV Y
Sbjct: 135 CYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYA 194
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
KC + +A +F+ LP ++VV W ++ GYAQ G+ ALE+ M + + ++ T
Sbjct: 195 KCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFAS 254
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+L ++G+ VH +++ GY + V+N+LI MY K + EA ++F + +D
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ +W +++T + Q G HD + LF RM G +PD +TF++VL +CS A L G++IH
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
+V G DV++ +AL+ MY KCGSM DA +VF +MS+++V +W +I G
Sbjct: 375 QLVHAGYNL--------DVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGC 426
Query: 421 -GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G+ +EAL+ F M + +KPD+VTF VLSAC+H G + +GR+ M YG+ P
Sbjct: 427 CAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 486
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
+EHY+C +D+LGRAG L EA + L+MP P VW LL+A R+H + + E AA+ V
Sbjct: 487 MVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENV 546
Query: 540 FQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS 599
+L+P G YV +S+IY A G+YE+ +R M +++V K PG SWIE+ +H F
Sbjct: 547 LKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVE 606
Query: 600 DRSHPEAKSIYAELHSLTARLREHG 624
D+SHPE++ IY EL LT +++E G
Sbjct: 607 DKSHPESEQIYVELGKLTEQIKEMG 631
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 359/609 (58%), Gaps = 24/609 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + + L G+++H+Y LR G ++S + I +L+ MY K ++ + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI-INTLVAMYGKLGKLASSKVL 258
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ ++ T+N ++S N+ + L++ M GV PD++T ++ C +
Sbjct: 259 LGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++H K G LD + ++GSALV+ Y C+ + +VF+ + R + LWNAM+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 209 GYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY+Q +AL +F M + G+ + T+ GV+ A + G F +HG VVK G D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--- 324
V N L+DMY + + A+ IF ME++D+ +WN+++T + +H+ L L
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 325 ---DRMLSAG-----FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+R +S G +P+ +T T+LP+C+ L+AL G++IH Y + N LA
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT------- 550
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + +AL+DMY KCG ++ ++ VF ++ +K+V +WN++I+ YGM G G+EA+D+ M
Sbjct: 551 -DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+KP+EVTF+ V +ACSHSG + +G +M+ YGV P+ +HY CV+D+LGRAG+
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 497 LNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ EAY+L MP + N W +LL ASR+H N ++ EIAAQ + QLEP +YVL++N
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY + G +++ ++R M++Q VRK PGCSWIE D +H F++ D SHP+++ + L +
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 616 LTARLREHG 624
L R+R+ G
Sbjct: 790 LWERMRKEG 798
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 266/558 (47%), Gaps = 34/558 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
A L+ A +++ G++IH+++ + G +DS +L+N+Y KC VF+ +S
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS- 160
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
E N ++N++IS S + L+ F M V P +T ++ C ++ ++
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G +L+ +I + LV Y K + + + RD+V WN +++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
+ +ALE R M EG+ FT++ VL A + + G+ +H +K G D
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSA 330
V +AL+DMY K V +F+ M ++ I WN+++ + Q + L LF M SA
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + T + V+PAC A IHG++V GL + D F+ N LMDMY+
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR--------DRFVQNTLMDMYS 451
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-----------CEA 439
+ G + A +F KM +D+ +WN MI GY ++AL + M
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKP+ +T + +L +C+ L++G+E + + + + + ++DM + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ ++ +P + N + W ++ A +HGN A I R+ ++ G N V +++ A
Sbjct: 571 SRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA-IDLLRMMMVQ-GVKPNEVTFISVFAA 627
Query: 560 ---GGKYEEVLDIRHTMR 574
G +E L I + M+
Sbjct: 628 CSHSGMVDEGLRIFYVMK 645
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 228/471 (48%), Gaps = 26/471 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H Y+LR +P S T + + ++F+ + S E + + + S SN
Sbjct: 29 HPYLLRA----TPTSATEDV---ASAVSGAPSIFISQSRSPE---WWIDLLRSKVRSNLL 78
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGS 173
L + + M LG+ PD Y FP L+K D+ + K+IH V+K G +D V + +
Sbjct: 79 REAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
LVN Y KC KVF+ + R+ V WN++++ ++ ALE FR M E +
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 234 SRFTVTGVLSA---LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT+ V++A L M G+ VH ++ G + ++N L+ MYGK + +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ +D+ +WN++++ Q L M+ G +PD T S+VLPACSHL
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G+++H Y + KNGS ++ F+ +AL+DMY C + + VF M + +
Sbjct: 317 MLRTGKELHAYAL-----KNGSLD--ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN MI GY + KEAL +F M E A L + T GV+ AC SG S+ +E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G+ ++DM R G+++ A + M + + V W T++
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/596 (35%), Positives = 360/596 (60%), Gaps = 14/596 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F+L++ + + C + +G+ IH Y+++ G P S +L++MY+K + A+ V
Sbjct: 259 FSLSSMVNA---CTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + +P++ ++NA+I+G ++ + L+ M++ G+ P+ +T +K C M
Sbjct: 316 FEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAG-MG 373
Query: 150 VLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E+ +++H + K+ ++ D+++ LV+ Y KC +E+A F LP +D++ WNA+++
Sbjct: 374 LKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIIS 433
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+Q E +AL +F M KEGI ++ T++ +L + + R VHG+ VK G+ S
Sbjct: 434 GYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHS 493
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V+N+LID YGK V +A IFE D+ S+ S++T + Q G + L+LF M
Sbjct: 494 DIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ 553
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+PD S++L AC++L+A G+Q+H +I+ G + D+F N+L++M
Sbjct: 554 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGF--------VLDIFAGNSLVNM 605
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ DA F++++++ + SW+ MI G G G++AL +F+ M + + P+ +T
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V VL AC+H+G +++ + + ME +G P EHY C+ID+LGRAG++NEA EL MP
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 725
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
EAN VW LL A+R+H + +L AA+ +F LEP G +VL++NIY + GK+E V +
Sbjct: 726 FEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAE 785
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR V+K PG SWIE+KD ++TF+ DRSH ++ IYA+L L+ + + G
Sbjct: 786 VRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAG 841
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 238/421 (56%), Gaps = 15/421 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C +L+ G +IH+++ ++G+ D P LIN+YSKC YA + + S EP+
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDE-SSEPD 121
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +++A+ISG+ N L F+ M LGV +++TF ++K C V + K++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+V G + DV++ + LV Y KC ++ ++F+E+P R+VV WNA+ + Y QI +
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F M GI + F+++ +++A + G+++HG ++K+GYD NAL+D
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIM---TVHEQCGNHDGTLRLFDRMLSAGFQPD 335
MY K + +A+ +FE +++ DI SWN+++ +HE +H+ L L +M +G P+
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE---HHEQALELLGQMKRSGICPN 358
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+ T S+ L AC+ + GRQ+H ++ + D+F++ L+DMY+KC +
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMDME--------SDLFVSVGLVDMYSKCDLL 410
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA+M F + +KD+ +WN +I GY + EAL +F M + + ++ T +L +
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470
Query: 456 S 456
+
Sbjct: 471 A 471
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 254/490 (51%), Gaps = 11/490 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +L+ G+++H ++ +G +L+ MY+KC + + +F+ + E N
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-ERN 222
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NA+ S + DF + + F M G+ P++++ ++ C + K IHG
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KLG D D + +ALV+ Y K + +A+ VFE++ D+V WNA++ G +
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+ +M + GI + FT++ L A MG + GR +H ++KM +S + V L+D
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVD 402
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A F ++ EKD+ +WN+I++ + Q L LF M G + T
Sbjct: 403 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 462
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
ST+L + + L + RQ+HG V +G D+++ N+L+D Y KC + DA
Sbjct: 463 LSTILKSTAGLQVVHVCRQVHGLSVKSGFH--------SDIYVVNSLIDSYGKCSHVEDA 514
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F + + D+ S+ MI Y GQG+EAL +F M + +LKPD +L+AC++
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 574
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
QG++ L + +YG V I +++M + G +++A A + E V W
Sbjct: 575 SAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR-AFSELTERGIVSWSA 632
Query: 519 LLAASRLHGN 528
++ HG+
Sbjct: 633 MIGGLAQHGH 642
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 200/397 (50%), Gaps = 22/397 (5%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P ++ L+ CC ++ +IH + K GL D I + L+N Y KC+ A K+
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
+E D+V W+A+++GYAQ G AL F M G+ + FT + VL A ++
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ G+ VHG+VV G++ V V N L+ MY K ++ +F+ + E+++ SWN++ + +
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 312 EQ---CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q CG G LF M+ +G +P+ + S+++ AC+ L G+ IHGY++ G
Sbjct: 234 VQIDFCGEAVG---LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
D F NAL+DMY K G + DA VF K+ + D+ SWN +I G + ++
Sbjct: 291 W--------DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF---LPLMESRYGVVPTIEHYT 485
AL++ M + + P+ T L AC+ G GR+ L M+ + ++
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG--- 399
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++DM + L +A +A + E + + W +++
Sbjct: 400 -LVDMYSKCDLLEDA-RMAFNLLPEKDLIAWNAIISG 434
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Q + + + + K + + + +LS + G +H + K G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ N LI++Y K + G A ++ + E D+ SW+++++ + Q G G L F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G + + TFS+VL ACS + L G+Q+HG +VV+G DVF+ N L
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE--------GDVFVANTL 198
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY KC D++ +F ++ +++V SWN + Y EA+ +F M + +KP+E
Sbjct: 199 VVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNE 258
Query: 446 VTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ +++AC+ S+G+ L++ Y P ++DM + G L +A +
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISV- 315
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + V W ++A LH + + A
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQA 343
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 359/609 (58%), Gaps = 24/609 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + + L G+++H+Y LR G ++S + I +L+ MY K ++ + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI-INTLVAMYGKLGKLASSKVL 258
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ ++ T+N ++S N+ + L++ M GV PD++T ++ C +
Sbjct: 259 LGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++H K G LD + ++GSALV+ Y C+ + +VF+ + R + LWNAM+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 209 GYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY+Q +AL +F M + G+ + T+ GV+ A + G F +HG VVK G D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--- 324
V N L+DMY + + A+ IF ME++D+ +WN+++T + +H+ L L
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 325 ---DRMLSAG-----FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+R +S G +P+ +T T+LP+C+ L+AL G++IH Y + N LA
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT------- 550
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + +AL+DMY KCG ++ ++ VF ++ +K+V +WN++I+ YGM G G+EA+D+ M
Sbjct: 551 -DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+KP+EVTF+ V +ACSHSG + +G +M+ YGV P+ +HY CV+D+LGRAG+
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 497 LNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ EAY+L MP + N W +LL ASR+H N ++ EIAAQ + QLEP +YVL++N
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY + G +++ ++R M++Q VRK PGCSWIE D +H F++ D SHP+++ + L +
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 616 LTARLREHG 624
L R+R+ G
Sbjct: 790 LWERMRKEG 798
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 266/558 (47%), Gaps = 34/558 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
A L+ A +++ G++IH+++ + G +DS +L+N+Y KC VF+ +S
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS- 160
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
E N ++N++IS S + L+ F M V P +T ++ C ++ ++
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G +L+ +I + LV Y K + + + RD+V WN +++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
+ +ALE R M EG+ FT++ VL A + + G+ +H +K G D
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSA 330
V +AL+DMY K V +F+ M ++ I WN+++ + Q + L LF M SA
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + T + V+PAC A IHG++V GL + D F+ N LMDMY+
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR--------DRFVQNTLMDMYS 451
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-----------CEA 439
+ G + A +F KM +D+ +WN MI GY ++AL + M
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKP+ +T + +L +C+ L++G+E + + + + + ++DM + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ ++ +P + N + W ++ A +HGN A I R+ ++ G N V +++ A
Sbjct: 571 SRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA-IDLLRMMMVQ-GVKPNEVTFISVFAA 627
Query: 560 ---GGKYEEVLDIRHTMR 574
G +E L I + M+
Sbjct: 628 CSHSGMVDEGLRIFYVMK 645
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 228/471 (48%), Gaps = 26/471 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H Y+LR +P S T + + ++F+ + S E + + + S SN
Sbjct: 29 HPYLLRA----TPTSATEDV---ASAVSGAPSIFISQSRSPE---WWIDLLRSKVRSNLL 78
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGS 173
L + + M LG+ PD Y FP L+K D+ + K+IH V+K G +D V + +
Sbjct: 79 REAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
LVN Y KC KVF+ + R+ V WN++++ ++ ALE FR M E +
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 234 SRFTVTGVLSA---LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT+ V++A L M G+ VH ++ G + ++N L+ MYGK + +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ +D+ +WN++++ Q L M+ G +PD T S+VLPACSHL
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G+++H Y + KNGS ++ F+ +AL+DMY C + + VF M + +
Sbjct: 317 MLRTGKELHAYAL-----KNGSLD--ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN MI GY + KEAL +F M E A L + T GV+ AC SG S+ +E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G+ ++DM R G+++ A + M + + V W T++
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 359/609 (58%), Gaps = 24/609 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + + L G+++H+Y LR G ++S + I +L+ MY K ++ + +
Sbjct: 113 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI-INTLVAMYGKLGKLASSKVL 171
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ ++ T+N ++S N+ + L++ M GV PD++T ++ C +
Sbjct: 172 LGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++H K G LD + ++GSALV+ Y C+ + +VF+ + R + LWNAM+
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290
Query: 209 GYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY+Q +AL +F M + G+ + T+ GV+ A + G F +HG VVK G D
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--- 324
V N L+DMY + + A+ IF ME++D+ +WN+++T + +H+ L L
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410
Query: 325 ---DRMLSAG-----FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+R +S G +P+ +T T+LP+C+ L+AL G++IH Y + N LA
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT------- 463
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + +AL+DMY KCG ++ ++ VF ++ +K+V +WN++I+ YGM G G+EA+D+ M
Sbjct: 464 -DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 522
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+KP+EVTF+ V +ACSHSG + +G +M+ YGV P+ +HY CV+D+LGRAG+
Sbjct: 523 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 582
Query: 497 LNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ EAY+L MP + N W +LL ASR+H N ++ EIAAQ + QLEP +YVL++N
Sbjct: 583 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 642
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY + G +++ ++R M++Q VRK PGCSWIE D +H F++ D SHP+++ + L +
Sbjct: 643 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 702
Query: 616 LTARLREHG 624
L R+R+ G
Sbjct: 703 LWERMRKEG 711
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 266/558 (47%), Gaps = 34/558 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
A L+ A +++ G++IH+++ + G +DS +L+N+Y KC VF+ +S
Sbjct: 15 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS- 73
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
E N ++N++IS S + L+ F M V P +T ++ C ++ ++
Sbjct: 74 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 133
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G +L+ +I + LV Y K + + + RD+V WN +++ Q
Sbjct: 134 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 192
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
+ +ALE R M EG+ FT++ VL A + + G+ +H +K G D
Sbjct: 193 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 252
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSA 330
V +AL+DMY K V +F+ M ++ I WN+++ + Q + L LF M SA
Sbjct: 253 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 312
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + T + V+PAC A IHG++V GL + D F+ N LMDMY+
Sbjct: 313 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR--------DRFVQNTLMDMYS 364
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-----------CEA 439
+ G + A +F KM +D+ +WN MI GY ++AL + M
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 424
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKP+ +T + +L +C+ L++G+E + + + + + ++DM + G L
Sbjct: 425 SLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 483
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ ++ +P + N + W ++ A +HGN A I R+ ++ G N V +++ A
Sbjct: 484 SRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA-IDLLRMMMVQ-GVKPNEVTFISVFAA 540
Query: 560 ---GGKYEEVLDIRHTMR 574
G +E L I + M+
Sbjct: 541 CSHSGMVDEGLRIFYVMK 558
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 200/400 (50%), Gaps = 15/400 (3%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFME 186
LG+ PD Y FP L+K D+ + K+IH V+K G +D V + + LVN Y KC
Sbjct: 4 LGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 63
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA-- 244
KVF+ + R+ V WN++++ ++ ALE FR M E + S FT+ V++A
Sbjct: 64 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACS 123
Query: 245 -LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
L M G+ VH ++ G + ++N L+ MYGK + + + +D+ +
Sbjct: 124 NLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 182
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN++++ Q L M+ G +PD T S+VLPACSHL L G+++H Y +
Sbjct: 183 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 242
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
KNGS ++ F+ +AL+DMY C + + VF M + + WN MI GY +
Sbjct: 243 -----KNGSLD--ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 295
Query: 424 GQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
KEAL +F M E A L + T GV+ AC SG S+ +E + + G+
Sbjct: 296 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRF 354
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++DM R G+++ A + M + + V W T++
Sbjct: 355 VQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 393
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M+ G +PD F +L A + L + G+QIH ++ G +D V + N L+
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYG-------VDSVTVANTLV 53
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
++Y KCG VF ++S+++ SWN +I + + AL+ F CM + ++P
Sbjct: 54 NLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSF 113
Query: 447 TFVGVLSACSH 457
T V V++ACS+
Sbjct: 114 TLVSVVTACSN 124
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 344/591 (58%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C N+ G+++H+ ++R G + +L++MY K ++ A +F +
Sbjct: 113 SCV--VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 170
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+ISG N + ++ M+ G++P+ + ++K C A
Sbjct: 171 P-DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 229
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D YIG LV+ Y K F+++A+KVF+ + RD++LWNA+++G +
Sbjct: 230 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 289
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A +F + KEG+ ++R T+ VL + + R VH + K+G+ V+
Sbjct: 290 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 349
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N LID Y K C+ +A+ +FE DI + S++T QC + +G ++LF ML G +
Sbjct: 350 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 409
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD S++L AC+ L+A G+Q+H +++ + D F NAL+ Y KCG
Sbjct: 410 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--------MSDAFAGNALVYTYAKCG 461
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA++ F+ + ++ V SW+ MI G G GK AL++F M + + P+ +T VL
Sbjct: 462 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 521
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+H+G + + + + M+ +G+ T EHY+C+ID+LGRAG+L++A EL +MP +AN
Sbjct: 522 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 581
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL ASR+H + +L ++AA+++F LEP G +VL++N Y + G + EV +R M
Sbjct: 582 SVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLM 641
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ N++K P SW+E+KD +HTFI D+SHP K IY++L L + + G
Sbjct: 642 KDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG 692
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 240/513 (46%), Gaps = 12/513 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+ Q G ++H+ + TG +L+ MY M A VF+ E N ++N ++
Sbjct: 22 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + ND + F M G+ P ++ F C++ C + +++H +V ++G +
Sbjct: 82 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 141
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV+ +ALV+ Y+K ++ A +FE++P DVV WNA+++G G H+A+E+ +M
Sbjct: 142 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 201
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
G+ + F ++ +L A G F GR +HG ++K DS + L+DMY K +
Sbjct: 202 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 261
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A+++F+ M +D+ WN++++ G HD +F + G + T + VL +
Sbjct: 262 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 321
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L A RQ+H G I D + N L+D Y KC + DA VF + S
Sbjct: 322 ASLEAASATRQVHALAEKIGF--------IFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 373
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
D+ + MI G+ A+ +F M L+PD +L+AC+ QG++
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 433
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ R + ++ + G + +A ELA + E V W ++ H
Sbjct: 434 VHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQH 491
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
G+ A R+ ++ G N++ M+++ A
Sbjct: 492 GHGKRALELFGRM--VDEGINPNHITMTSVLCA 522
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 412 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 468
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F++L E V +++AMI G + + L+ F M G+ P+ T ++ C
Sbjct: 469 AFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527
Query: 149 AVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
V E K+ + + G+D S +++ + +++A+++ +P + + +W A+
Sbjct: 528 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 587
Query: 207 V 207
+
Sbjct: 588 L 588
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 344/591 (58%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C N+ G+++H+ ++R G + +L++MY K ++ A +F +
Sbjct: 206 SCV--VNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 263
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+ISG N + ++ M+ G++P+ + ++K C A
Sbjct: 264 P-DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG 322
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D YIG LV+ Y K F+++A+KVF+ + RD++LWNA+++G +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHG 382
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A +F + KEG+ ++R T+ VL + + R VH + K+G+ V+
Sbjct: 383 GRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVV 442
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N LID Y K C+ +A+ +FE DI + S++T QC + +G ++LF ML G +
Sbjct: 443 NGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD S++L AC+ L+A G+Q+H +++ + D F NAL+ Y KCG
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--------MSDAFAGNALVYTYAKCG 554
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA++ F+ + ++ V SW+ MI G G GK AL++F M + + P+ +T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+H+G + + + + M+ +G+ T EHY+C+ID+LGRAG+L++A EL +MP +AN
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL ASR+H + +L ++AA+++F LEP G +VL++N Y + G + EV +R M
Sbjct: 675 SVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLM 734
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ N++K P SW+E+KD +HTFI D+SHP K IY++L L + + G
Sbjct: 735 KDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAG 785
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 240/513 (46%), Gaps = 12/513 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+ Q G ++H+ + TG +L+ MY M A VF+ E N ++N ++
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + ND + F M G+ P ++ F C++ C + +++H +V ++G +
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV+ +ALV+ Y+K ++ A +FE++P DVV WNA+++G G H+A+E+ +M
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
G+ + F ++ +L A G F GR +HG ++K DS + L+DMY K +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A+++F+ M +D+ WN++++ G HD +F + G + T + VL +
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L A RQ+H G I D + N L+D Y KC + DA VF + S
Sbjct: 415 ASLEAASATRQVHALAEKIGF--------IFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 466
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
D+ + MI G+ A+ +F M L+PD +L+AC+ QG++
Sbjct: 467 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 526
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ R + ++ + G + +A ELA + E V W ++ H
Sbjct: 527 VHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQH 584
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
G+ A R+ ++ G N++ M+++ A
Sbjct: 585 GHGKRALELFGRM--VDEGINPNHITMTSVLCA 615
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 178/364 (48%), Gaps = 24/364 (6%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC+ A +VF+E+P V W+++V Y+ G A++ F M EG+ +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF- 293
F + VL + G VH + + G+ S V V NAL+ MYG + +A +F
Sbjct: 103 EFALPVVLKCVPDAQL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159
Query: 294 EMMEEKDIFSWNSIMTVH---EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
E E++ SWN +M+ + +QCG+ +++F M+ +G QP FS V+ AC+
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ GRQ+H +V G K DVF NAL+DMY K G + A ++F KM DV
Sbjct: 217 NIDAGRQVHAMVVRMGYEK--------DVFTANALVDMYVKMGRVDIASVIFEKMPDSDV 268
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I G ++G A+++ M + L P+ +L AC+ +G GR+
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 328
Query: 471 MESRYGVVPTIEHYTCV--IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
M + Y V +DM + L++A ++ M + + ++W L++ G
Sbjct: 329 M---IKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALISGCSHGGR 384
Query: 529 TDLA 532
D A
Sbjct: 385 HDEA 388
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 505 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F++L E V +++AMI G + + L+ F M G+ P+ T ++ C
Sbjct: 562 AFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 149 AVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
V E K+ + + G+D S +++ + +++A+++ +P + + +W A+
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680
Query: 207 V 207
+
Sbjct: 681 L 681
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 337/587 (57%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA +LQKG ++HSY+ + GI + SL+++Y KC ++ AL +FN+ S N
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTN 309
Query: 99 VFTYNAMISGFYS-NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V +N M+ F ND A K + F M+ G+ P+++T+PC+++ C + ++IH
Sbjct: 310 VVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L K G + D+Y+ L++ Y K ++E+A +V E L +DVV W +M+ GY Q
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL F+ M K GIW + +S + + G +H + GY V + NAL+
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
++Y + + EA FE +E KD +WN +++ Q G H+ L++F RM +G + ++
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF + L A ++LA + G+QIH ++ G + + + NAL+ +Y KCGS D
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSF--------ETEVGNALISLYGKCGSFED 600
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+M F++MS+++ SWN +I G+G EALD+F M + +KP++VTF+GVL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G + +G + M YG+ P +HY CVID+ GRAGQL+ A + MP A+ +VWR
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H N ++ E AA+ + +LEP +YVL+SN Y K+ +R MR +
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
VRK PG SWIE+K+ +H F DR HP A+ IY L + R+ + G
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVG 827
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 249/503 (49%), Gaps = 20/503 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ ++S C +G+ IH+ + G ++I +Y +C + A
Sbjct: 143 PYVLSSVLSS---CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ V T+N +ISG L+ F M+ G+ PD T L+ C +
Sbjct: 200 VFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + ++H +FK G+ D + +L++ Y+KC +E AL +F +VVLWN M+
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ QI + K+ E+F +M GI ++FT +L G +H + VK G++S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFD 325
+ V LIDMY K + +A + EM++EKD+ SW S++ HE C + L F
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD---ALAAFK 435
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G PD + ++ + C+ + A+ G QIH I V+G + DV + NAL
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--------GDVSIWNAL 487
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+++Y +CG +R+A F ++ KD +WN ++ G+ G +EAL +F M ++ +K +
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNV 547
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TFV LSA ++ + QG++ + + G E +I + G+ G +A ++
Sbjct: 548 FTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEVGNALISLYGKCGSFEDA-KMEF 605
Query: 506 AMPNEANPVVWRTLLAASRLHGN 528
+ +E N V W T++ + HG
Sbjct: 606 SEMSERNEVSWNTIITSCSQHGR 628
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 229/479 (47%), Gaps = 18/479 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ + LI++YSK + A VF LS NV ++ AM+SG+ N
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNV-SWVAMLSGYAQN 121
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L + M + GV+P Y ++ C + + IH +K G ++++G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+A++ YL+C A +VF ++P RD V +N +++G+AQ G ALE+F M G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T++ +L+A +G + G +H + K G S + +L+D+Y K V AL I
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + ++ WN ++ Q + + LF +M +AG +P+ T+ +L C+ +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH V G D++++ L+DMY+K G + A+ V + +KDV S
Sbjct: 362 DLGEQIHSLSVKTGFE--------SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY K+AL F M + + PD + +S C+ + QG L +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHA 470
Query: 473 SRY--GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL---AASRLH 526
Y G + + ++++ R G++ EA+ + + + W L+ A S LH
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFS-SFEEIEHKDEITWNGLVSGFAQSGLH 528
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 13/423 (3%)
Query: 106 ISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKL 163
++GF +++ K L F + RQ G L F C ++ C +V +IH
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGL-GPLDFACALRACRGNGRRWQVVPEIHAKAVTR 71
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
GL +G+ L++ Y K + A +VFEEL RD V W AM++GYAQ G +AL ++
Sbjct: 72 GLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLY 131
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R+M + G+ + + ++ VLS+ F GR++H K G+ S + V NA+I +Y +
Sbjct: 132 RQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
A +F M +D ++N++++ H QCG+ + L +F+ M +G PD VT S++L
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L L G Q+H Y+ G++ D M +L+D+Y KCG + A ++F
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGIS--------SDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +V WN+M++ +G ++ ++F M A ++P++ T+ +L C+ + +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + L + G + +IDM + G L +A + L M E + V W +++A
Sbjct: 364 GEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRV-LEMLKEKDVVSWTSMIAGY 421
Query: 524 RLH 526
H
Sbjct: 422 VQH 424
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/600 (36%), Positives = 347/600 (57%), Gaps = 11/600 (1%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKY 85
+P T C A LQ + + ++GQ++H++M+ I+++ + T L Y+ C M
Sbjct: 54 QYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQ 113
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A +F+ + + N F +N MI G+ SN K L + M G D +T+P ++K C
Sbjct: 114 AEVIFDGIVLK-NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACG 172
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
D++ V +++H V GL+ D+Y+G++L+ Y K M A VF+ + RD+ WN
Sbjct: 173 DLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNT 232
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++GYA+ + A VF M K G++ T+ G+LSA + K G+V+HG V+
Sbjct: 233 MISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNS 292
Query: 266 Y-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ N+LI+MY C+ +A +FE + KD SWNS++ + + G+ +LRLF
Sbjct: 293 IGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLF 352
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
RM G PD VTF VL AC +AAL +G IH Y+V G N + A
Sbjct: 353 RRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN--------TIVGTA 404
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY+KCGS+ ++ VF +M K + SW+ M+ GYG+ G+G+EA+ + M + PD
Sbjct: 405 LVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPD 464
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
F +LSACSH+G + +G+E ME Y V P + HY+C++D+LGRAG L+EAY +
Sbjct: 465 NGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVII 524
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
M + +W LL ASRLH N LAEI+AQ+VF + P +Y+ +SNIY A +++
Sbjct: 525 RTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWD 584
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V +R +R++ ++K+PGCS+IEL + +H F+ D+SH + + IYA+L+ L +L+E G
Sbjct: 585 DVERVRAMVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAG 644
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 337/587 (57%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA +LQKG ++HSY+ + GI + SL+++Y KC ++ AL +FN+ S N
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTN 309
Query: 99 VFTYNAMISGFYS-NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V +N M+ F ND A K + F M+ G+ P+++T+PC+++ C + ++IH
Sbjct: 310 VVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L K G + D+Y+ L++ Y K ++E+A +V E L +DVV W +M+ GY Q
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL F+ M K GIW + +S + + G +H + GY V + NAL+
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
++Y + + EA FE +E KD +WN +++ Q G H+ L++F RM +G + ++
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF + L A ++LA + G+QIH ++ G + + + NAL+ +Y KCGS D
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSF--------ETEVGNALISLYGKCGSFED 600
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+M F++MS+++ SWN +I G+G EALD+F M + +KP++VTF+GVL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G + +G + M YG+ P +HY CVID+ GRAGQL+ A + MP A+ +VWR
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H N ++ E AA+ + +LEP +YVL+SN Y K+ +R MR +
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
VRK PG SWIE+K+ +H F DR HP A+ IY L + R+ + G
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVG 827
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 249/503 (49%), Gaps = 20/503 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ ++S C +G+ IH+ + G ++I +Y +C + A
Sbjct: 143 PYVLSSVLSS---CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ V T+N +ISG L+ F M+ G+ PD T L+ C +
Sbjct: 200 VFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + ++H +FK G+ D + +L++ Y+KC +E AL +F +VVLWN M+
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ QI + K+ E+F +M GI ++FT +L G +H + VK G++S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFD 325
+ V LIDMY K + +A + EM++EKD+ SW S++ HE C + L F
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD---ALAAFK 435
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G PD + ++ + C+ + A+ G QIH I V+G + DV + NAL
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--------GDVSIWNAL 487
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+++Y +CG +R+A F ++ KD +WN ++ G+ G +EAL +F M ++ +K +
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNV 547
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TFV LSA ++ + QG++ + + G E +I + G+ G +A ++
Sbjct: 548 FTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEVGNALISLYGKCGSFEDA-KMEF 605
Query: 506 AMPNEANPVVWRTLLAASRLHGN 528
+ +E N V W T++ + HG
Sbjct: 606 SEMSERNEVSWNTIITSCSQHGR 628
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 229/479 (47%), Gaps = 18/479 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ + LI++YSK + A VF LS NV ++ AM+SG+ N
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNV-SWVAMLSGYAQN 121
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L + M + GV+P Y ++ C + + IH +K G ++++G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+A++ YL+C A +VF ++P RD V +N +++G+AQ G ALE+F M G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T++ +L+A +G + G +H + K G S + +L+D+Y K V AL I
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + ++ WN ++ Q + + LF +M +AG +P+ T+ +L C+ +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH V G D++++ L+DMY+K G + A+ V + +KDV S
Sbjct: 362 DLGEQIHSLSVKTGFE--------SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY K+AL F M + + PD + +S C+ + QG L +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHA 470
Query: 473 SRY--GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL---AASRLH 526
Y G + + ++++ R G++ EA+ + + + W L+ A S LH
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFS-SFEEIEHKDEITWNGLVSGFAQSGLH 528
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 13/423 (3%)
Query: 106 ISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKL 163
++GF +++ K L F + RQ G L F C ++ C +V +IH
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGL-GPLDFACALRACRGNGRRWQVVPEIHAKAVTR 71
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
GL +G+ L++ Y K + A +VFEEL RD V W AM++GYAQ G +AL ++
Sbjct: 72 GLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLY 131
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R+M + G+ + + ++ VLS+ F GR++H K G+ S + V NA+I +Y +
Sbjct: 132 RQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
A +F M +D ++N++++ H QCG+ + L +F+ M +G PD VT S++L
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L L G Q+H Y+ G++ D M +L+D+Y KCG + A ++F
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGIS--------SDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +V WN+M++ +G ++ ++F M A ++P++ T+ +L C+ + +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + L + G + +IDM + G L +A + L M E + V W +++A
Sbjct: 364 GEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRV-LEMLKEKDVVSWTSMIAGY 421
Query: 524 RLH 526
H
Sbjct: 422 VQH 424
>gi|15128398|dbj|BAB62584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 612
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/576 (40%), Positives = 349/576 (60%), Gaps = 37/576 (6%)
Query: 66 SPLSITSLINMYSKCCQ---MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA-FKGLDF 121
SP ++TSL+++Y++ ++ + + P + +NA +S + A F+GL
Sbjct: 39 SPAALTSLVSLYARAAAPALHRHVAPLLLDRPSPPPLPCFNAGLSLPHPLALAVFRGL-- 96
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ PD ++FP L+ + + +H L + GL D++ SA++ + L+
Sbjct: 97 -----RHAYSPDAFSFPPLVS---SAPSPPHLLALHALALRCGLAHDLFCASAMLRSCLR 148
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTG 240
+ A ++F ELP RDVV+WNAMVNG+A++G F A+E FR M ++G + +S FTVTG
Sbjct: 149 FGLADHARRLFGELPRRDVVVWNAMVNGFARLGCFGHAVECFRMMREDGEVEISSFTVTG 208
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE-- 298
+LS +G VHG+VVK ++ V V NAL+D+YGK V +A +FE M +
Sbjct: 209 ILSVCTATADLGHGAAVHGLVVKSAFEQEVSVCNALVDLYGKCHKVDDAAMVFEGMADIV 268
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
KD+FSWNS+++ +H GT++LF RM PD VT + VLPAC+ AAL GR++
Sbjct: 269 KDLFSWNSMLSALHYSADHAGTMKLFSRMRRVAVWPDAVTVAAVLPACAQTAALQVGREV 328
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
HGYIV +GLA +G+ D F NAL+DMY K G++ +A+ +F +M ++DVASWNIMI
Sbjct: 329 HGYIVTSGLACHGAL----DSFACNALVDMYAKSGALDEARRIFDRMQQRDVASWNIMID 384
Query: 419 GYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY G GKEAL++F M E +L PDE+T +G LSACSHSG + +G+ FL M+ + +
Sbjct: 385 GYASHGHGKEALELFCQMTEVERLLPDEITLLGALSACSHSGLVEEGKNFLKRMKEEFSL 444
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV---VWRTLLAASRLHGNTDLAEI 534
P +EHY CV DMLGRAG+L EA ++ +A V WRT LAA R+HG+ + A+
Sbjct: 445 EPQLEHYACVTDMLGRAGRLEEARKVV----EDAGDVGVGAWRTYLAACRMHGDKERAQE 500
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK-NPGCSWIELKDG- 592
AA+ + E G +VL++N Y G ++E+ ++R M+++ V+K PGCSW+E+
Sbjct: 501 AARMLMTTEQSESGGWVLLANTYGWEGNFDELEEVRGEMKRRGVQKAAPGCSWVEVGGDD 560
Query: 593 ------LHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+H F+S DR HPEA IY LH+L + +R+
Sbjct: 561 RGSGAVMHAFVSGDRGHPEADMIYEMLHALISWMRD 596
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 144/293 (49%), Gaps = 9/293 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T L +C +L G +H ++++ +L+++Y KC ++ A VF +
Sbjct: 205 TVTGILSVCTATADLGHGAAVHGLVVKSAFEQEVSVCNALVDLYGKCHKVDDAAMVFEGM 264
Query: 94 S-CEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ ++F++N+M+S YS D A + F+ MR++ V PD T ++ C A+
Sbjct: 265 ADIVKDLFSWNSMLSALHYSADHAGT-MKLFSRMRRVAVWPDAVTVAAVLPACAQTAALQ 323
Query: 152 EVKKIHGLVFKLGL----DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++HG + GL LD + +ALV+ Y K ++EA ++F+ + RDV WN M+
Sbjct: 324 VGREVHGYIVTSGLACHGALDSFACNALVDMYAKSGALDEARRIFDRMQQRDVASWNIMI 383
Query: 208 NGYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMG 265
+GYA G +ALE+F +M++ E + T+ G LSA G + G+ + + +
Sbjct: 384 DGYASHGHGKEALELFCQMTEVERLLPDEITLLGALSACSHSGLVEEGKNFLKRMKEEFS 443
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
+ + + DM G+ + EA ++ E + + +W + + G+ +
Sbjct: 444 LEPQLEHYACVTDMLGRAGRLEEARKVVEDAGDVGVGAWRTYLAACRMHGDKE 496
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 345/591 (58%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C N++ G+++H+ ++R G + +L++MY K ++ A +F +
Sbjct: 206 SCV--VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+ISG N + ++ M+ G++P+ +T ++K C A
Sbjct: 264 P-DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D YIG LV+ Y K F+++A KVF+ + RD++L NA+++G +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +AL +F + KEG+ ++R T+ VL + + R VH + VK+G+ V+
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N LID Y K C+ +A +FE DI + S++T QC + +G ++LF ML G +
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD S++L AC+ L+A G+Q+H +++ + D F NAL+ Y KCG
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--------MSDAFAGNALVYTYAKCG 554
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA++ F+ + ++ V SW+ MI G G GK AL++F M + + P+ +T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+H+G + + + + M+ +G+ T EHY+C+ID+LGRAG+L++A EL +MP +AN
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL ASR+H + +L ++AA+++F LEP G +VL++N Y + G + EV +R M
Sbjct: 675 SIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLM 734
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ N++K P SWIE+KD +HTFI D+SHP K IYA+L L + + G
Sbjct: 735 KDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAG 785
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 239/509 (46%), Gaps = 12/509 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++H+ + TG +L+ MY M A VFN E N ++N ++S +
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
ND + F M G+ P ++ F C++ C + +++H +V ++G D DV+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ALV+ Y+K ++ A +FE++P DVV WNA+++G G H+A+E+ +M G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + FT++ +L A G F GR +HG ++K DS + L+DMY K + +A
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ M +D+ N++++ G HD L LF + G + T + VL + + L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
A RQ+H V G I D + N L+D Y KC + DA VF + S D+
Sbjct: 419 AASTTRQVHALAVKIGF--------IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+ MI G+ A+ +F M L+PD +L+AC+ QG++
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ R + ++ + G + +A ELA + E V W ++ HG+
Sbjct: 531 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGHGK 588
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A R+ ++ G N++ M+++ A
Sbjct: 589 RALELFGRM--VDEGINPNHITMTSVLCA 615
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 18/301 (5%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC+ A + F+E+P V W+++V Y+ G A++ F M EG+ +
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF- 293
F + VL + + G VH + + G+ S V V NAL+ MYG + +A +F
Sbjct: 103 EFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 294 EMMEEKDIFSWNSIMTVH---EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
E E++ SWN +M+ + +QCG+ +++F M+ +G QP FS V+ AC+
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ GRQ+H +V G K DVF NAL+DMY K G + A ++F KM DV
Sbjct: 217 NIEAGRQVHAMVVRMGYDK--------DVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I G ++G A+++ M + L P+ T +L ACS +G GR+
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328
Query: 471 M 471
M
Sbjct: 329 M 329
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 161/319 (50%), Gaps = 4/319 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L+ C+ G++IH +M++ L++MY+K + A V
Sbjct: 304 FTLSSI---LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + ++ NA+ISG + L F +R+ G+ ++ T ++K + A
Sbjct: 361 FDWM-FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+++H L K+G D ++ + L+++Y KC + +A +VFEE D++ +M+
Sbjct: 420 ASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA 479
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+Q A+++F M ++G+ F ++ +L+A + ++ G+ VH ++K + S
Sbjct: 480 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
NAL+ Y K + +A F + E+ + SW++++ Q G+ L LF RM+
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599
Query: 330 AGFQPDLVTFSTVLPACSH 348
G P+ +T ++VL AC+H
Sbjct: 600 EGINPNHITMTSVLCACNH 618
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 16/276 (5%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +H ++K G S N LI Y K + A F+ + + SW+S++T +
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ F M + G + VL C A L G Q+H + G
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGS---- 133
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDM 432
DVF+ NAL+ MY G M DA+ VF + S+++ SWN ++ Y + Q +A+ +
Sbjct: 134 ----DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M + ++P E F V++AC+ S + GR+ + M R G + ++DM
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYM 248
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ G+++ A + MP +++ V W L++ L+G+
Sbjct: 249 KMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 505 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F++L E V +++AMI G + + L+ F M G+ P+ T ++ C
Sbjct: 562 AFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 149 AVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
V E K+ + + G+D S +++ + +++A+++ +P + + +W A+
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 207 V 207
+
Sbjct: 681 L 681
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/598 (36%), Positives = 353/598 (59%), Gaps = 14/598 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C +L+KG+EIH ++ G + ++T ++NMY+KC ++ A +F+ + E +
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMP-ERD 240
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +N +ISG+ N F L+ M++ G PD T ++ DV ++ + IHG
Sbjct: 241 LVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHG 300
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G + V + +ALV+ Y KC + A +F+ + + VV WN+M++GY Q G+
Sbjct: 301 YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA 360
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E+F++M E + M+ TV G L A +G + GR VH ++ ++ S V VMN+LI
Sbjct: 361 AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLIS 420
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A EIFE ++ K + SWN+++ + Q G + + F +M +PD T
Sbjct: 421 MYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFT 480
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+V+PA + L+ L + IHG ++ L KN VF+ AL+DMY KCG++ A
Sbjct: 481 MVSVIPALAELSVLPQAKWIHGLVIRTCLDKN--------VFVATALVDMYAKCGAVHTA 532
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F M ++ V +WN MI GYG G GK AL++F M + +KP+EVTF+ VLSACSHS
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G ++ M+ YG+ P ++HY ++D+LGRA +LNEA++ MP E V+
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A R+H N +L E AA R+F L+P G +VL++NIY +++V +R TM ++ +
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
+K PG S +EL++ +HTF S SHP+AK IYA L +L R++ AG + D++S
Sbjct: 713 QKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIK-----AAGYMPDTNS 765
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 253/505 (50%), Gaps = 19/505 (3%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
+ + HP + L+LC T++++ + +++ G+ L T L++++ K
Sbjct: 73 SHVYKHPSAIL-----LELC---TSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGS 124
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ A VF + + + Y+ M+ G+ N + FF MR GV P Y F L+K
Sbjct: 125 LHEAARVFQPIEDKIDEL-YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLK 183
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C D + + K+IH + G +V+ + +VN Y KC+ +EEA K+F+ +P RD+V
Sbjct: 184 VCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVC 243
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN +++GYAQ G ALE+ RM +EG T+ +L A+ +G + GR +HG +
Sbjct: 244 WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 303
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ G++S V V AL+DMY K VG A IF+ M K + SWNS++ + Q G+ +
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F +M+ + VT L AC+ L + GR +H + L DV +
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG--------SDVSVM 415
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+L+ MY+KC + A +F + K + SWN MILGY +G+ EA+D F M +K
Sbjct: 416 NSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIK 475
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD T V V+ A + L Q + L+ R + + T ++DM + G ++ A +
Sbjct: 476 PDSFTMVSVIPALAELSVLPQAKWIHGLV-IRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 503 LALAMPNEANPVVWRTLLAASRLHG 527
L M +E + W ++ HG
Sbjct: 535 L-FDMMDERHVTTWNAMIDGYGTHG 558
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 345/591 (58%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C N++ G+++H+ ++R G + +L++MY K ++ A +F +
Sbjct: 206 SCV--VNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+ISG N + ++ M+ G++P+ +T ++K C A
Sbjct: 264 P-DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLG 322
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D YIG LV+ Y K F+++A KVF+ + RD++L NA+++G +
Sbjct: 323 RQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHG 382
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +AL +F + KEG+ ++R T+ VL + + R VH + VK+G+ V+
Sbjct: 383 GRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVV 442
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N LID Y K C+ +A +FE DI + S++T QC + +G ++LF ML G +
Sbjct: 443 NGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLE 502
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD S++L AC+ L+A G+Q+H +++ + D F NAL+ Y KCG
Sbjct: 503 PDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQF--------MSDAFAGNALVYTYAKCG 554
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA++ F+ + ++ V SW+ MI G G GK AL++F M + + P+ +T VL
Sbjct: 555 SIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLC 614
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+H+G + + + + M+ +G+ T EHY+C+ID+LGRAG+L++A EL +MP +AN
Sbjct: 615 ACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANA 674
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL ASR+H + +L ++AA+++F LEP G +VL++N Y + G + EV +R M
Sbjct: 675 SIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLM 734
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ N++K P SWIE+KD +HTFI D+SHP K IYA+L L + + G
Sbjct: 735 KDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAG 785
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 239/509 (46%), Gaps = 12/509 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++H+ + TG +L+ MY M A VFN E N ++N ++S +
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
ND + F M G+ P ++ F C++ C + +++H +V ++G D DV+
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVF 238
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ALV+ Y+K ++ A +FE++P DVV WNA+++G G H+A+E+ +M G
Sbjct: 239 TANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSG 298
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + FT++ +L A G F GR +HG ++K DS + L+DMY K + +A
Sbjct: 299 LVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAR 358
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ M +D+ N++++ G HD L LF + G + T + VL + + L
Sbjct: 359 KVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLE 418
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
A RQ+H V G I D + N L+D Y KC + DA VF + S D+
Sbjct: 419 AASTTRQVHALAVKIGF--------IFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDI 470
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+ MI G+ A+ +F M L+PD +L+AC+ QG++
Sbjct: 471 IACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 530
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ R + ++ + G + +A ELA + E V W ++ HG+
Sbjct: 531 LIKRQFMSDAFAG-NALVYTYAKCGSIEDA-ELAFSSLPERGVVSWSAMIGGLAQHGHGK 588
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A R+ ++ G N++ M+++ A
Sbjct: 589 RALELFGRM--VDEGINPNHITMTSVLCA 615
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 155/301 (51%), Gaps = 18/301 (5%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC+ A +VF+E+P V W+++V Y+ G A++ F M EG+ +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF- 293
F + VL + + G VH + + G+ S V V NAL+ MYG + +A +F
Sbjct: 103 EFALPVVLKCVPDA---RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 294 EMMEEKDIFSWNSIMTVH---EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
E E++ SWN +M+ + +QCG+ +++F M+ +G QP FS V+ AC+
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGD---AIQVFGEMVWSGIQPTEFGFSCVVNACTGSR 216
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ GRQ+H +V G K DVF NAL+DMY K G + A ++F KM DV
Sbjct: 217 NIEAGRQVHAMVVRMGYDK--------DVFTANALVDMYMKMGRVDIASVIFEKMPDSDV 268
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I G ++G A+++ M + L P+ T +L ACS +G GR+
Sbjct: 269 VSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGF 328
Query: 471 M 471
M
Sbjct: 329 M 329
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 161/319 (50%), Gaps = 4/319 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L+ C+ G++IH +M++ L++MY+K + A V
Sbjct: 304 FTLSSI---LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + ++ NA+ISG + L F +R+ G+ ++ T ++K + A
Sbjct: 361 FDWM-FHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+++H L K+G D ++ + L+++Y KC + +A +VFEE D++ +M+
Sbjct: 420 ASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA 479
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+Q A+++F M ++G+ F ++ +L+A + ++ G+ VH ++K + S
Sbjct: 480 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
NAL+ Y K + +A F + E+ + SW++++ Q G+ L LF RM+
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599
Query: 330 AGFQPDLVTFSTVLPACSH 348
G P+ +T ++VL AC+H
Sbjct: 600 EGINPNHITMTSVLCACNH 618
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 130/276 (47%), Gaps = 16/276 (5%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +H ++K G S N LI Y K + A +F+ + + SW+S++T +
Sbjct: 23 GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ F M + G + VL C A L G Q+H + G
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARL--GAQVHAMAMATGFGS---- 133
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDM 432
DVF+ NAL+ MY G M DA+ VF + S+++ SWN ++ Y + Q +A+ +
Sbjct: 134 ----DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQV 189
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M + ++P E F V++AC+ S + GR+ + M R G + ++DM
Sbjct: 190 FGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQ-VHAMVVRMGYDKDVFTANALVDMYM 248
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ G+++ A + MP +++ V W L++ L+G+
Sbjct: 249 KMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH 283
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 505 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F++L E V +++AMI G + + L+ F M G+ P+ T ++ C
Sbjct: 562 AFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620
Query: 149 AVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
V E K+ + + G+D S +++ + +++A+++ +P + + +W A+
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680
Query: 207 V 207
+
Sbjct: 681 L 681
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/585 (36%), Positives = 346/585 (59%), Gaps = 13/585 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C +L+ G+++H+ ++RTG + +L++MYSK + A VF +
Sbjct: 206 SCV--VNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKV 263
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA ISG + L+ M+ G++P+ +T ++K C A
Sbjct: 264 P-KTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFA 322
Query: 154 --KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IHG + K D D YIG ALV+ Y K +++A KVFE +P +D++LWNA+++G +
Sbjct: 323 LGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCS 382
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G ++L +F RM KEG ++R T+ VL + + + VH + K+G+ S
Sbjct: 383 HGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSH 442
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V+N LID Y K C+ A ++FE +I ++ S++T QC + + ++LF ML G
Sbjct: 443 VVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG 502
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD S++L AC+ L+A G+Q+H +++ K + DVF NAL+ Y K
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR--------KFMTDVFAGNALVYTYAK 554
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA + F+ + K V SW+ MI G G GK ALD+F M + ++ P+ +T V
Sbjct: 555 CGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSV 614
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+H+G + + + + M+ +G+ T EHY+C+ID+LGRAG+L++A EL +MP EA
Sbjct: 615 LCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEA 674
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
N VW LLAASR+H + +L ++AA+++F LEP G +VL++N Y + G ++EV +R
Sbjct: 675 NAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRK 734
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
M+ V+K P SW+ELKD +HTFI D+SHP A+ IYA+L L
Sbjct: 735 LMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEEL 779
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/509 (27%), Positives = 237/509 (46%), Gaps = 16/509 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA L G ++H+ + TG+ +L+ MY + A VF+ + + N +
Sbjct: 112 CAPDAGL--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVS 169
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N M+S F ND ++ F M GV P+++ F C++ C + +K+H +V
Sbjct: 170 WNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVV 229
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ G D DV+ +ALV+ Y K + A VF ++P DVV WNA ++G G ALE
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALE 289
Query: 222 VFRRMSKEGIWMSRFTVTGVLS--ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+ +M G+ + FT++ +L A G F GR +HG ++K DS + AL+DM
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDM 349
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K + +A ++FE + KD+ WN++++ G H +L LF RM G + T
Sbjct: 350 YAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTL 409
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ VL + + L A+ Q+H G + D + N L+D Y KC +R A
Sbjct: 410 AAVLKSTASLEAISDTTQVHALAEKIGF--------LSDSHVVNGLIDSYWKCNCLRYAN 461
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF + S ++ ++ MI G++A+ +F M L+PD +L+AC+
Sbjct: 462 KVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLS 521
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
QG++ + R + ++ + G + +A +LA + + V W +
Sbjct: 522 AYEQGKQVHAHLIKRKFMTDVFAG-NALVYTYAKCGSIEDA-DLAFSGLPDKGVVSWSAM 579
Query: 520 LAASRLHGNTDLAEIAAQRVF--QLEPGH 546
+ HG+ A +R+ ++ P H
Sbjct: 580 IGGLAQHGHGKRALDVFRRMVDERIAPNH 608
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 146/298 (48%), Gaps = 14/298 (4%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH + K GL L + + L++ Y KC+ A +VF+E P V W+++V Y+
Sbjct: 26 IHAHLLKSGL-LHAF-RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNAL 83
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+AL FR M G+ + F + VL G G VH + V G + V NA
Sbjct: 84 PREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANA 140
Query: 276 LIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
L+ MYG V EA +F E +++ SWN +M+ + + LF M+ +G +P
Sbjct: 141 LVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRP 200
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ FS V+ AC+ L GR++H +V G K DVF NAL+DMY+K G
Sbjct: 201 NEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDK--------DVFTANALVDMYSKLGD 252
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+ A +VF K+ K DV SWN I G + G + AL++ M + L P+ T +L
Sbjct: 253 IHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSIL 310
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L++ L CA + ++G+++H+++++ + + +L+ Y+KC ++ A
Sbjct: 507 PFVLSSL---LNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADL 563
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F+ L + V +++AMI G + + LD F M + P+ T ++ C C+
Sbjct: 564 AFSGLP-DKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL-CACNHA 621
Query: 149 AVLEVKKIHGLVFK--LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
+++ K + K G+D S +++ + +++A+++ +P + +W A
Sbjct: 622 GLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGA 681
Query: 206 MV 207
++
Sbjct: 682 LL 683
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/587 (35%), Positives = 355/587 (60%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA G++IH ML+ G+ S +L++MYSK +++ A+ VF +++ P+
Sbjct: 190 LNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPD 248
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIH 157
V ++NA+I+G +D L + M+ G P+ +T +K C M E+ +++H
Sbjct: 249 VVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACA-AMGFKELGRQLH 307
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K+ D++ LV+ Y KC+ M++A + ++ +P +D++ WNA+++GY+Q G+
Sbjct: 308 SSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHL 367
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+ +F +M E I ++ T++ VL ++ + K + +H I +K G S V+N+L+
Sbjct: 368 DAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLL 427
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D YGK + EA +IFE +D+ ++ S++T + Q G+ + L+L+ +M A +PD
Sbjct: 428 DTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPF 487
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
S++L AC++L+A G+Q+H + + G + D+F +N+L++MY KCGS+ D
Sbjct: 488 ICSSLLNACANLSAYEQGKQLHVHAIKFGF--------MCDIFASNSLVNMYAKCGSIED 539
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F+++ + + SW+ MI GY G GKEAL +F+ M + P+ +T V VL AC+H
Sbjct: 540 ADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G +++G+++ ME +G+ PT EHY C+ID+LGR+G+LNEA EL ++P EA+ VW
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A+R+H N +L + AA+ +F LEP G +VL++NIY + G +E V +R M+
Sbjct: 660 ALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSK 719
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PG SWIE+KD ++TFI DRSH + IYA+L L L + G
Sbjct: 720 VKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAG 766
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 269/523 (51%), Gaps = 17/523 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + +L G+++H + TG +L+ MY+KC + + +F + E N
Sbjct: 89 LKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI-VERN 147
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NA+ S + ++ + + F M + G++P++++ ++ C + +KIHG
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L+ K+GLDLD + +ALV+ Y K +E A+ VF+++ DVV WNA++ G
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL + M G + FT++ L A MGF + GR +H ++KM S + L+D
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + + +A ++ M +KDI +WN++++ + QCG+H + LF +M S + T
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
STVL + + L A+ +QIH + +G+ D ++ N+L+D Y KC + +A
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGI--------YSDFYVINSLLDTYGKCNHIDEA 439
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F + + +D+ ++ MI Y G G+EAL ++ M +A +KPD +L+AC++
Sbjct: 440 SKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANL 499
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
QG++ L + ++G + I +++M + G + +A +PN V W
Sbjct: 500 SAYEQGKQ-LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRG-IVSWSA 557
Query: 519 LLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNIYVA 559
++ HG+ A R+F L G N++ + ++ A
Sbjct: 558 MIGGYAQHGHGK----EALRLFNQMLRDGVPPNHITLVSVLCA 596
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 252/482 (52%), Gaps = 15/482 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
E+H+++++ G P L+ +YSKC + YA + + S E +V ++++++SG+ N
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDE-SSELDVVSWSSLLSGYVQN 60
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
F + L FN M LGV +++TFP ++K C + +K+HG+ G + D ++
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ LV Y KC ++++ ++F + R+VV WNA+ + Y Q +A+ +F+ M + GI
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ F+++ +L+A + GR +HG+++KMG D NAL+DMY K + A+ +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 293 FEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
F+ + D+ SWN+I+ V C +D L L D M +G +P++ T S+ L AC+ +
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDC--NDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
GRQ+H ++ D+F L+DMY+KC M DA+ + M KKD+
Sbjct: 299 FKELGRQLHSSLI--------KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDI 350
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN +I GY G +A+ +FS M + ++ T VL + + + ++ +
Sbjct: 351 IAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQ-IHT 409
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ + G+ ++D G+ ++EA ++ E + V + +++ A +G+ +
Sbjct: 410 ISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGDGE 468
Query: 531 LA 532
A
Sbjct: 469 EA 470
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 181/336 (53%), Gaps = 4/336 (1%)
Query: 22 GNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC 81
G+ T + FTL++ +L+ CA + G+++HS +++ + L++MYSKC
Sbjct: 277 GSGTRPNMFTLSS---ALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCE 333
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
M A ++++ + ++ +NA+ISG+ + F+ M + ++ T ++
Sbjct: 334 MMDDARRAYDSMP-KKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVL 392
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K + A+ K+IH + K G+ D Y+ ++L++TY KC ++EA K+FEE D+V
Sbjct: 393 KSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLV 452
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
+ +M+ Y+Q G+ +AL+++ +M I F + +L+A + ++ G+ +H
Sbjct: 453 AYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHA 512
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
+K G+ + N+L++MY K + +A F + + I SW++++ + Q G+ L
Sbjct: 513 IKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEAL 572
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
RLF++ML G P+ +T +VL AC+H + G+Q
Sbjct: 573 RLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQ 608
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF C + L CA+ + ++G+++H + ++ G + + SL+NMY+KC ++ A
Sbjct: 486 PFI---CSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 89 VFNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
F+ + PN + +++AMI G+ + + L FN M + GV P+ T ++ C
Sbjct: 543 AFSEI---PNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599
Query: 147 VMAVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
V E K+ + G+ + +++ + + EA+++ +P D +W
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659
Query: 205 AMVNGYAQIGEFHKALEVFRRMSK 228
A++ G A+I HK +E+ ++ +K
Sbjct: 660 ALL-GAARI---HKNIELGQKAAK 679
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 342/588 (58%), Gaps = 12/588 (2%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+ +++H+ +RT + S S + +I++Y+ + AL VF L P V + ++I F
Sbjct: 23 QAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEALLVFKTLESPP-VLAWKSVIRCF 80
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ L F MR G PD FP ++K C +M + + +HG + +LG+D D+
Sbjct: 81 TDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
Y G+AL+N Y K ++ KVFE +P +DVV +N ++ GYAQ G + AL + R M
Sbjct: 141 YTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
+ FT++ VL G+ +HG V++ G DS V + ++L+DMY K + ++
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+F + +D SWNS++ + Q G ++ LRLF +M+SA +P V FS+V+PAC+HL
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A L G+Q+HGY++ G +N +F+ +AL+DMY+KCG+++ A+ +F +M+ D
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRN--------IFIASALVDMYSKCGNIQAARKIFDRMNLHD 372
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SW +I+G+ + G G EA+ +F M +KP++V FV VL+ACSH G + + +
Sbjct: 373 EVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFN 432
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M YG+ +EHY V D+LGRAG+L EAY+ M E VW TLL++ +H N
Sbjct: 433 SMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNL 492
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+LAE A+++F ++ + G YVLM N+Y + G+++E+ +R +R++ +RK P CSWIE+
Sbjct: 493 ELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEM 552
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC--AGTLFDSD 635
K+ H F+S DRSHP I L ++ ++ + G +G L D D
Sbjct: 553 KNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVD 600
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 196/381 (51%), Gaps = 11/381 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L+ G+ +H +++R G+ + +L+NMYSK + VF L +
Sbjct: 112 LKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVF-ELMPRKD 170
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +YN +I+G+ + L M + PD +T ++ + + VL+ K+IHG
Sbjct: 171 VVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHG 230
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + G+D DVYIGS+LV+ Y K +E++ +VF L RD + WN++V GY Q G +++
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR+M + + V+ A + G+ +HG V++ G+ + + +AL+D
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + A +IF+ M D SW +I+ H G+ + LF+ M G +P+ V
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAK-NGSCKDIDDVFMNNALMDMYTKCGSMRD 397
F VL ACSH+ + + GY N + K G ++++ A+ D+ + G + +
Sbjct: 411 FVAVLTACSHVGLV---DEAWGYF--NSMTKVYGLNQELEHY---AAVADLLGRAGKLEE 462
Query: 398 AQMVFTKMSKKDVAS-WNIMI 417
A +KM + S W+ ++
Sbjct: 463 AYDFISKMRVEPTGSVWSTLL 483
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 178/356 (50%), Gaps = 19/356 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ L + + ++ KG+EIH Y++R G IDS + I +SL++MY+K +++ +
Sbjct: 207 FTLSSV---LPIFSEYVDVLKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSER 262
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF++L ++ ++N++++G+ N + L F M V P F +I C +
Sbjct: 263 VFSHLYRRDSI-SWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLA 321
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++HG V + G +++I SALV+ Y KC ++ A K+F+ + L D V W A++
Sbjct: 322 TLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIM 381
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYD 267
G+A G H+A+ +F M ++G+ ++ VL+A +G + K+ G +
Sbjct: 382 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 441
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDR 326
+ A+ D+ G+ + EA + M + S W+++++ C H L L ++
Sbjct: 442 QELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLS---SCSVHK-NLELAEK 497
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGR-----QIHGYIVVNGLAKNGSCKDID 377
+ F D + C+ A+ +GR ++ + GL K +C I+
Sbjct: 498 VAEKIFTIDSENMGAYVLMCNMYAS--NGRWKEMAKLRLRVRKKGLRKKPACSWIE 551
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/646 (35%), Positives = 357/646 (55%), Gaps = 43/646 (6%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQ 82
T + P+ L SL L + + Q ++IHS +++TG+ ++ +++ LI S
Sbjct: 22 TSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN 81
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YAL +F ++ +PN F +N MI G + +DF+ M GV P+ YTFP L+K
Sbjct: 82 LSYALLLFESIE-QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK-------------------CQ 183
C V A E K+IHG V KLGL+ D ++ ++L+N Y +
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200
Query: 184 F------------MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
F +++A ++FEE+P+RD V WNAM+ GYAQ G F +AL F+ M + +
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T+ VLSA G + G V + G S + ++NALIDMY K + +A +
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+FE + EKDI SWN ++ + ++ L LF +M + +P+ VTF ++LPAC++L A
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+ IH YI L + + + +L+DMY KCG++ A+ VF M K +
Sbjct: 381 LDLGKWIHAYIDKKFLG-------LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN MI G M G AL++F M + +PD++TFVGVLSACSH+G + GR+ M
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
Y + P ++HY C+ID+LGRAG +EA L M + + +W +LL A R+HGN +L
Sbjct: 494 VEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVEL 553
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
E AA+ +F+LEP + G YVL+SNIY G++++V IR + + ++K PGCS IE+
Sbjct: 554 GEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDS 613
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGTLFDSD 635
+H F+ D+ H +++ IY L + L + G + L+D D
Sbjct: 614 VVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMD 659
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/556 (38%), Positives = 332/556 (59%), Gaps = 13/556 (2%)
Query: 73 LINMYSKCC----QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
L+NM +C Y F+F+ + +PN+F +N MI G SND ++F+ MR
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIK-QPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE 106
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G LP+ +TFP ++K C ++ + KIH LV K G D DV++ ++LV Y KC ++E+A
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
KVF+++P ++VV W A+++GY +G+F +A+++FRR+ + + FT+ VLSA +
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G +G +H +++MG V V +L+DMY K + +A +F+ M EKDI SW +++
Sbjct: 227 GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ G + LF +M +PD T VL AC+ L AL G + G + N
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFL 346
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
N + AL+D+Y KCGSM A VF M +KD WN +I G M+G K
Sbjct: 347 YNP--------VLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
+ +F + + +KPD TF+G+L C+H+G + +GR + M + + P+IEHY C++
Sbjct: 399 SFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+LGRAG L+EA++L MP EAN +VW LL A R+H +T LAE+A +++ +LEP + G
Sbjct: 459 DLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
NYVL+SNIY A K++E +R +M ++ ++K PGCSWIE+ +H F+ D+ HP ++
Sbjct: 519 NYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEK 578
Query: 609 IYAELHSLTARLREHG 624
IYA+L LT +++ G
Sbjct: 579 IYAKLDELTKKMKVAG 594
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 181/334 (54%), Gaps = 8/334 (2%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
F PF L + CA +LQ G +IH+ +++ G TSL+ +Y+KC +
Sbjct: 111 NNFTFPFVL-------KACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYL 163
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A VF+++ + NV ++ A+ISG+ + +D F + ++ + PD +T ++
Sbjct: 164 EDAHKVFDDIP-DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + + IH + ++G+ +V++G++LV+ Y KC ME+A VF+ +P +D+V W
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM+ GYA G +A+++F +M +E + +TV GVLSA +G + G V G+V +
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDR 342
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ + ALID+Y K + A E+F+ M+EKD WN+I++ G + L
Sbjct: 343 NEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGL 402
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
F ++ G +PD TF +L C+H + GR+
Sbjct: 403 FGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRR 436
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 3/277 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L G+ IH ++ G++ + TSL++MY+KC M+ A VF+ +
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E ++ ++ AMI G+ N + +D F M++ V PD YT ++ C + A+
Sbjct: 275 P-EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELG 333
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ + GLV + + +G+AL++ Y KC M A +VF+ + +D V+WNA+++G A
Sbjct: 334 EWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMN 393
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSGVPV 272
G + +F ++ K GI T G+L G GR + + +
Sbjct: 394 GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEH 453
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ G+ + EA ++ M E + W +++
Sbjct: 454 YGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALL 490
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/585 (35%), Positives = 338/585 (57%), Gaps = 13/585 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ + C +L+ G+++H ++RTG + +L++MYSK ++ A VF +
Sbjct: 209 SCV--VNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKM 266
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++NA ISG ++ + L+ M+ G++P+ +T ++K C A
Sbjct: 267 PA-ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLG 325
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IHG + K D D ++ LV+ Y K F+++A KVF+ +P RD++LWNA+++G +
Sbjct: 326 RQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHD 385
Query: 214 GEFHKALEVFRRMSKEGIWM--SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G + L +F RM KEG+ + +R T+ VL + + R VH + K+G S
Sbjct: 386 GRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSH 445
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V+N LID Y K + A+++F+ DI S ++MT QC + + ++LF +ML G
Sbjct: 446 VINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG 505
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD S++L AC+ L+A G+Q+H +++ DVF NAL+ Y K
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTS--------DVFAGNALVYAYAK 557
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA M F+ + ++ + SW+ MI G G GK ALD+F M + + P+ +T V
Sbjct: 558 CGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSV 617
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSAC+H+G + +++ M+ +G+ T EHY C+ID+LGRAG+L +A EL MP +A
Sbjct: 618 LSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQA 677
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
N VW LL ASR+H + +L +AA+++F LEP G +VL++N Y + G ++E+ +R
Sbjct: 678 NAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRK 737
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
M+ NV+K P SW+E+KD +HTFI D+SHP + IY +L L
Sbjct: 738 LMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAEL 782
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 245/518 (47%), Gaps = 17/518 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN---LSCEPNVFTYN 103
+++ G ++H+ + T ++ +L+ +Y + A +F+ + E N ++N
Sbjct: 115 DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWN 174
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
MIS + ND + + F M G P+++ F C++ C + +++HG V +
Sbjct: 175 TMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT 234
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G + DV+ +ALV+ Y K +E A VFE++P DVV WNA ++G G H+ALE+
Sbjct: 235 GYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+M G+ + FT++ VL A G F GR +HG +VK D V L+DMY K
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL--VTFST 341
+ +A ++F+ M +D+ WN++++ G H L LF RM G D+ T ++
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL + + A+ H RQ+H GL + D + N L+D Y KCG + A V
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGL--------LSDSHVINGLIDSYWKCGQLDYAIKV 466
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F + D+ S M+ G++A+ +F M L+PD +L+AC+
Sbjct: 467 FKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAY 526
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
QG++ + R + ++ + G + +A ++A + E V W ++
Sbjct: 527 EQGKQVHAHLIKRQ-FTSDVFAGNALVYAYAKCGSIEDA-DMAFSGLPERGIVSWSAMIG 584
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
HG+ A R+ L+ G N++ ++++ A
Sbjct: 585 GLAQHGHGKRALDLFHRM--LDEGVAPNHITLTSVLSA 620
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 170/353 (48%), Gaps = 21/353 (5%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L+ Y +C+ A VF+E+P V W+++V Y+ G AL FR M G+ +
Sbjct: 43 LLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCN 102
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
F + VL + F G VH + V V V NAL+ +YG V EA +F+
Sbjct: 103 EFALPVVLKCAPDVRF---GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFD 159
Query: 295 ----MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ E++ SWN++++ + + + +F M+ +G +P+ FS V+ AC+
Sbjct: 160 EYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSR 219
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L GRQ+HG +V G K DVF NAL+DMY+K G + A VF KM DV
Sbjct: 220 DLEAGRQVHGAVVRTGYEK--------DVFTANALVDMYSKLGDIEMAATVFEKMPAADV 271
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN I G G AL++ M + L P+ T VL AC+ +G + GR+
Sbjct: 272 VSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGF 331
Query: 471 MESRYGVVPTIEHYTCV--IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
M V + + V +DM + G L++A ++ MP + ++W L++
Sbjct: 332 M---VKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR-DLILWNALIS 380
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 167/321 (52%), Gaps = 6/321 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L+ CA G++IH +M++ L++MY+K + A V
Sbjct: 307 FTLSSV---LKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKV 363
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD--KYTFPCLIKCCCDV 147
F+ + ++ +NA+ISG + + L F+ MR+ G+ D + T ++K
Sbjct: 364 FDFMP-RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A+ +++H L K+GL D ++ + L+++Y KC ++ A+KVF+E D++ M+
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+Q A+++F +M ++G+ F ++ +L+A + ++ G+ VH ++K +
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFT 542
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V NAL+ Y K + +A F + E+ I SW++++ Q G+ L LF RM
Sbjct: 543 SDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRM 602
Query: 328 LSAGFQPDLVTFSTVLPACSH 348
L G P+ +T ++VL AC+H
Sbjct: 603 LDEGVAPNHITLTSVLSACNH 623
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/587 (36%), Positives = 336/587 (57%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA +LQKG ++HSY+ + GI + SL+++Y KC ++ AL +FN+ S N
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS-SDRTN 309
Query: 99 VFTYNAMISGFYS-NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V +N M+ F ND A K + F M+ G+ P+++T+PC+++ C + ++IH
Sbjct: 310 VVLWNLMLVAFGQINDLA-KSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L K G + D+Y+ L++ Y K ++E+A +V E L +DVV W +M+ GY Q
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL F+ M K GIW + +S + + G +H + GY V + NAL+
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
++Y + + EA FE ME KD + N +++ Q G H+ L++F RM +G + ++
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVF 548
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF + L A ++LA + G+QIH ++ G + + + NAL+ +Y KCGS D
Sbjct: 549 TFVSALSASANLAEIKQGKQIHARVIKTGHSF--------ETEVGNALISLYGKCGSFED 600
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+M F++MS+++ SWN +I G+G EALD+F M + +KP++VTF+GVL+ACSH
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSH 660
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G + +G + M YG+ P +HY CVID+ GRAGQL+ A + MP A+ +VWR
Sbjct: 661 VGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWR 720
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H N ++ E AA+ + +LEP +YVL+SN Y K+ +R MR +
Sbjct: 721 TLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRG 780
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
VRK PG SWIE+K+ +H F DR HP A+ IY L + R+ + G
Sbjct: 781 VRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVG 827
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 248/503 (49%), Gaps = 20/503 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ ++S C +G+ IH+ + G ++I +Y +C + A
Sbjct: 143 PYVLSSVLSS---CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAER 199
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ V T+N +ISG L+ F M+ G+ PD T L+ C +
Sbjct: 200 VFCDMPHRDTV-TFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + ++H +FK G+ D + +L++ Y+KC +E AL +F +VVLWN M+
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ QI + K+ E+F +M GI ++FT +L G +H + VK G++S
Sbjct: 319 AFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFES 378
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFD 325
+ V LIDMY K + +A + EM++EKD+ SW S++ HE C + L F
Sbjct: 379 DMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKD---ALAAFK 435
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G PD + ++ + C+ + A+ G QIH I V+G + DV + NAL
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS--------GDVSIWNAL 487
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+++Y +CG +R+A F +M KD + N ++ G+ G +EAL +F M ++ +K +
Sbjct: 488 VNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNV 547
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TFV LSA ++ + QG++ + + G E +I + G+ G +A ++
Sbjct: 548 FTFVSALSASANLAEIKQGKQIHARV-IKTGHSFETEVGNALISLYGKCGSFEDA-KMEF 605
Query: 506 AMPNEANPVVWRTLLAASRLHGN 528
+ +E N V W T++ + HG
Sbjct: 606 SEMSERNEVSWNTIITSCSQHGR 628
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 219/451 (48%), Gaps = 14/451 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ + LI++YSK + A VF LS NV ++ AM+SG+ N
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNV-SWVAMLSGYAQN 121
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L + M + GV+P Y ++ C + + IH +K G ++++G
Sbjct: 122 GLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVG 181
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+A++ YL+C A +VF ++P RD V +N +++G+AQ G ALE+F M G+
Sbjct: 182 NAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLS 241
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T++ +L+A +G + G +H + K G S + +L+D+Y K V AL I
Sbjct: 242 PDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVI 301
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + ++ WN ++ Q + + LF +M +AG +P+ T+ +L C+ +
Sbjct: 302 FNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREI 361
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH V G D++++ L+DMY+K G + A+ V + +KDV S
Sbjct: 362 DLGEQIHSLSVKTGFE--------SDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVS 413
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY K+AL F M + + PD + +S C+ + QG L +
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQG---LQIHA 470
Query: 473 SRY--GVVPTIEHYTCVIDMLGRAGQLNEAY 501
Y G + + ++++ R G++ EA+
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAF 501
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 216/423 (51%), Gaps = 13/423 (3%)
Query: 106 ISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKL 163
++GF +++ K L F + RQ G L F C ++ C +V +IH
Sbjct: 13 LAGFLAHEDPAKVLSLFADKARQHGGL-GPLDFACALRACRGNGRRWQVVPEIHAKAVTR 71
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
GL +G+ L++ Y K + A +VFEEL RD V W AM++GYAQ G +AL ++
Sbjct: 72 GLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLY 131
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R+M + G+ + + ++ VLS+ F GR++H K G+ S + V NA+I +Y +
Sbjct: 132 RQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRC 191
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
A +F M +D ++N++++ H QCG+ + L +F+ M +G PD VT S++L
Sbjct: 192 GSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLL 251
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L L G Q+H Y+ G++ D M +L+D+Y KCG + A ++F
Sbjct: 252 AACASLGDLQKGTQLHSYLFKAGIS--------SDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +V WN+M++ +G ++ ++F M A ++P++ T+ +L C+ + +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDL 363
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + L + G + +IDM + G L +A + L M E + V W +++A
Sbjct: 364 GEQIHSL-SVKTGFESDMYVSGVLIDMYSKYGWLEKARRV-LEMLKEKDVVSWTSMIAGY 421
Query: 524 RLH 526
H
Sbjct: 422 VQH 424
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/600 (35%), Positives = 353/600 (58%), Gaps = 22/600 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F+L+T L CA + G ++H Y+++ G P S +L++MY+K + A+ V
Sbjct: 189 FSLSTV---LNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAV 245
Query: 90 FNNLSCEPNVFTYNAMISG---FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
F + +P++ ++NA+I+G ND A K M V P +T +K C
Sbjct: 246 FYEIP-KPDIVSWNAVIAGCVLHEKNDLALK---LLGKMGSYRVAPSMFTLSSALKACAA 301
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ V +++H + K+ ++ D ++G L++ Y KC +++A VF+ +P +DV++WN++
Sbjct: 302 IGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSI 361
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG--RVVHGIVVKM 264
++GY+ G +A+ +F M KEG+ ++ T++ +L + G NG VH I +K
Sbjct: 362 ISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS--TAGSQANGFCEQVHTISIKS 419
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
GY V N+L+D YGK + +A ++FE+ +D+ ++ S++T + Q G + L+++
Sbjct: 420 GYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMY 479
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
RM +PD FS++ AC++L+A G+QIH +++ GL + DVF N+
Sbjct: 480 LRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGL--------LSDVFAGNS 531
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L++MY KCGS+ DA +F ++S + + SW+ MI G G G++AL +F M + + P+
Sbjct: 532 LVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPN 591
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+T V VLSAC+H+G +++ R F LME +G+ PT EHY C++D+LGR G+L+EA L
Sbjct: 592 HITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLV 651
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP +A+ VW LL A+R+H N +L AA+ + LEP G ++L++NIY + G ++
Sbjct: 652 KEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWD 711
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V +R +M+ V+K PG SWIELKD ++TFI DRSHP +K IY +L L RL G
Sbjct: 712 NVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAG 771
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 57/334 (17%)
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
VN Y KCQ A K+ + D+V W+A+++GY Q G +AL + M G +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 236 FTVTGVL---------------------SALIMMGFFKN-------------------GR 255
FT + VL + +I G N G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM---TVHE 312
VHG ++K+GYDS NAL+DMY K C A+ +F + + DI SWN+++ +HE
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ +D L+L +M S P + T S+ L AC+ + + GRQ+H ++ +
Sbjct: 269 K---NDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEP--- 322
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D F+ L+DMY+KCG ++DA+MVF M KDV WN +I GY G EA+ +
Sbjct: 323 -----DSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSL 377
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHS---GFLSQ 463
F+ M + L+ ++ T +L + + S GF Q
Sbjct: 378 FTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQ 411
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+++Y+KC R A+ + S+ D+ SW+ +I GY +G+G+EAL + M K +E
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 446 VTFVGVLSACSHSGFLSQGREF 467
TF VL CS + L G++
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQI 170
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 342/594 (57%), Gaps = 12/594 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+A+ +A+ CA +L KG+++HSY+L+ G+ + SL+++Y KC + AL +F
Sbjct: 246 TIASLLAA---CASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ NV +N M+ + K D F M GV P+++T+PCL++ C +
Sbjct: 303 KSGD-RTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEI 361
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH L K G + D+Y+ L++ Y K ++++A ++ E L +DVV W +M+ GY
Sbjct: 362 NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGY 421
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q +ALE F+ M GIW + +SA + + G+ +H V GY + V
Sbjct: 422 VQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADV 481
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ NAL+++Y + EA +FE +E KD +WN +++ Q G ++ L +F +M A
Sbjct: 482 SIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQA 541
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + ++ TF + + A ++LA + G+QIH ++ G C +V NAL+ +Y
Sbjct: 542 GVKYNVFTFVSSISASANLADIKQGKQIHATVIKTG------CTSETEV--ANALISLYG 593
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ DA+M F +MS+++ SWN +I G G EALD+F M + LKP++VTF+G
Sbjct: 594 KCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIG 653
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL+ACSH G + +G + M S +G+ P +HY CV+D+LGRAGQL+ A + MP
Sbjct: 654 VLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVS 713
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
AN +VWRTLL+A R+H N ++ E+AA+ + +LEP +YVL+SN Y GK+ +R
Sbjct: 714 ANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVR 773
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ + VRK PG SWIE+K+ +H F DR HP A IY L L RL + G
Sbjct: 774 KMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIG 827
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/499 (28%), Positives = 249/499 (49%), Gaps = 14/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ +++ C ++G+ +H+ + + G + +LI +Y + + A
Sbjct: 143 PYVLSSVLSA---CTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAER 199
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + V T+N +IS L+ F MR G PD T L+ C +
Sbjct: 200 VFSEMPYCDRV-TFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + K++H + K G+ D I +L++ Y+KC + EAL++F+ +VVLWN M+
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y QI + K+ ++F +M G+ + FT +L G G +H + +K G++S
Sbjct: 319 AYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFES 378
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V LIDMY K + +A I E++E KD+ SW S++ + Q L F M
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G PD + ++ + AC+ + A+ G+QIH + V+G + DV + NAL+++
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSA--------DVSIWNALVNL 490
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG ++A +F + KD +WN M+ G+ G +EAL++F M +A +K + TF
Sbjct: 491 YARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTF 550
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +SA ++ + QG++ + + G E +I + G+ G + +A M
Sbjct: 551 VSSISASANLADIKQGKQIHATV-IKTGCTSETEVANALISLYGKCGSIEDAKMQFFEM- 608
Query: 509 NEANPVVWRTLLAASRLHG 527
+E N V W T++ + HG
Sbjct: 609 SERNHVSWNTIITSCSQHG 627
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 234/471 (49%), Gaps = 17/471 (3%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH+ + G+ + ++ LI++Y+K ++ A VF LS NV ++ AM+SG+ N
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNV-SWVAMLSGYARNG 122
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ + ++ M GV+P Y ++ C + + +H V+K G + +G+
Sbjct: 123 LGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGN 182
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL+ YL+ + A +VF E+P D V +N +++ +AQ G ALE+F M G
Sbjct: 183 ALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T+ +L+A +G G+ +H ++K G + +L+D+Y K + EALEIF
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIF 302
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + ++ WN ++ + Q + + LF +M++AG +P+ T+ +L C++ +
Sbjct: 303 KSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEIN 362
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G QIH + G D++++ L+DMY+K G + A+ + + KDV SW
Sbjct: 363 LGEQIHLLSIKTGFE--------SDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSW 414
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI GY KEAL+ F M + PD + +SAC+ + QG++ + S
Sbjct: 415 TSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQ----IHS 470
Query: 474 RY---GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
R G + + ++++ R G+ EA+ L A+ ++ + + W +++
Sbjct: 471 RVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMVS 520
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 19/431 (4%)
Query: 101 TYNAMISGFYSNDFAFKGLDFF----NHMRQLGVLPDKYTFPCLIK-CCCDVMAVLEVKK 155
+ N ++GF +++ K L F R LG + F C ++ C V V
Sbjct: 8 SLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSV----DFACALRECRGSVKHWPLVPV 63
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH GL D G+ L++ Y K ++ A +VFE+L RD V W AM++GYA+ G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A+ ++ +M G+ + + ++ VLSA F+ GR+VH V K G S V NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI +Y + + A +F M D ++N++++ H QCGN + L +F+ M +G+ PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT +++L AC+ + L G+Q+H Y++ G++ D + +L+D+Y KCG +
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSP--------DYIIEGSLLDLYVKCGVI 295
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A +F + +V WN+M++ YG ++ D+F M A ++P+E T+ +L C
Sbjct: 296 VEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTC 355
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+++G ++ G E + L+ + G + +IDM + G L++A + L + + V
Sbjct: 356 TYAGEINLG-EQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRI-LEVLEAKDVVS 413
Query: 516 WRTLLAASRLH 526
W +++A H
Sbjct: 414 WTSMIAGYVQH 424
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/633 (37%), Positives = 341/633 (53%), Gaps = 52/633 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMK 84
NHP +L L + ++ ++IH+ MLRTG+ P S + LI S +
Sbjct: 35 NHP--------TLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLD 86
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKC 143
YA VF+ + PN++T+N +I + S+ + L F M Q PDK+TFP LIK
Sbjct: 87 YAQQVFDQIP-HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA 145
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
++ + K HG+V K+ L DV+I ++L++ Y KC + +VF +P RDVV W
Sbjct: 146 ASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSW 205
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M+ + Q G +ALE+F+ M + + + T+ GVLSA F+ GR VH + +
Sbjct: 206 NSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER 265
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW------------------- 304
+ + NA++DMY K V +A +F+ M EKDI SW
Sbjct: 266 NRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGI 325
Query: 305 ------------NSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAA 351
N++++ +EQCG L LF + LS +PD VT + L AC+ L A
Sbjct: 326 FDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGA 385
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+ G IH YI G+ N + +L+DMY KCG ++ A MVF + +KDV
Sbjct: 386 MDLGGWIHVYIKKQGMKLN--------CHLTTSLIDMYCKCGDLQKALMVFHSVERKDVF 437
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
W+ MI G M G GK+A+ +FS M E K+KP+ VTF +L ACSH G + +GR F M
Sbjct: 438 VWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 497
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
E YGV+P ++HY C++D+LGRAG L EA EL MP VW LL A +H N L
Sbjct: 498 ELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVL 557
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
AE A ++ +LEPG+ G YVL+SNIY GK++ V +R MR ++K PGCS IE+
Sbjct: 558 AEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDG 617
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+ D SHP AK IYA+L + ARL G
Sbjct: 618 IVHEFLVGDNSHPSAKKIYAKLDEIVARLETIG 650
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 344/586 (58%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C +L++G+EIH ++ + ++T ++NMY+KC Q+ A +F+ + E +
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERD 212
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +I+GF N FA K L+ M+ G PD T ++ DV ++ K IHG
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G V I +AL + Y KC +E A +F+ + + VV WN+M++GY Q GE K
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ VF +M +EGI + T+ L A +G + G+ VH V ++ S + VMN+LI
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +IF + + SWN+++ + Q G L F M S G +PD T
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFT 452
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+V+PA + L+ H + IHG I+ + L KN +F+ AL+DMY+KCG++ A
Sbjct: 453 MVSVIPALAELSVTRHAKWIHGLIIRSCLDKN--------IFVTTALVDMYSKCGAIHMA 504
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F +S + V +WN MI GYG G G+ ALD+F M + ++P+++T++ V+SACSHS
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G M+ YG+ P+++HY ++D+LGRAG++ EA++ MP V+
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N ++ E AA+++F+L P G +VL++NIY + K+ +V ++R TM ++ +
Sbjct: 625 MLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCS +EL++ +H+F S +HP++K IYA L L ++ G
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 251/505 (49%), Gaps = 19/505 (3%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
+ + HP + L+LC T++++ +I +++ G+ + L T L++++SK
Sbjct: 45 SHVYKHPAAVL-----LELC---TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGS 96
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ A VF + + + Y+ M+ G+ N L F MR V P Y F L+K
Sbjct: 97 INEAARVFEPIDDKLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLK 155
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C D + K+IHG + +V+ + +VN Y KC+ +++A K+F+ +P RD+V
Sbjct: 156 VCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVS 215
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN ++ G++Q G KALE+ RM EG T+ VL A +G G+ +HG +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ G+ V + AL DMY K V A IF+ M++K + SWNS+M + Q G + +
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F++ML G P VT L AC+ L L G+ +H ++ L D+ +
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG--------SDISVM 387
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+L+ MY+KC + A +F ++ + SWN MILGY +G+ EAL+ FS M +K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD T V V+ A + + L+ R + I T ++DM + G ++ A +
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLI-IRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 503 LALAMPNEANPVVWRTLLAASRLHG 527
L M ++ + + W ++ HG
Sbjct: 507 L-FDMISDRHVITWNAMIDGYGTHG 530
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/586 (36%), Positives = 338/586 (57%), Gaps = 11/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA +++ +G+EIH++++R G +LI MY KC + A +F+ + + +
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRD 263
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMISG++ N +GL+ F+ MR+L V PD T + C + + +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K D+ + ++L+ Y +EEA VF + +DVV W AM+ K
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E ++ M EGI T+ VLSA +G G +H I +K G S V V N+LID
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K KCV ALE+F + K++ SW S++ + + N LF R + +P+ VT
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLI-LGLRINNRSFEALLFFRQMKESMKPNSVT 502
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ + ALM G++IH + + G+ +G F+ NA++DMY +CG A
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDG--------FLPNAILDMYVRCGRKVPA 554
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F KKDV +WNI++ GY GQ K A+++F M E ++ PDE+TF+ +L ACS S
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G +++G E+ +M+++Y + P ++HY CV+D+LGRAGQL++AY+ MP + +W
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H N +L EIAA+RVF+ + G Y+L+ N+Y G +++V +R MR++ +
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+PGCSW+E+K +H F+S D SH ++K I L ++++E+G
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENG 779
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 13/508 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA L+LC + +G ++ + + +L++M+ + + A +VF +S
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMS- 159
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E +VF++N ++ G+ + L+ ++ M + P+ YTFP ++K C V + K+
Sbjct: 160 ERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKE 219
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH V + G + DV +G+AL+ Y+KC + A +F+++P RD + WNAM++GY + G
Sbjct: 220 IHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGG 279
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ LE+F M + + T+T V SA ++ + GR VHG VVK + + + N+
Sbjct: 280 GLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNS 339
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI MY + EA +F ME KD+ SW +++ + + M G PD
Sbjct: 340 LIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPD 399
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+T +VL AC+ + L G ++H + GL + V ++N+L+DMY+KC +
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGL--------VSHVIVSNSLIDMYSKCKCV 451
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A VF +S K+V SW +ILG ++ + EAL F M E+ +KP+ VT + VLSAC
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSAC 510
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ G L +G+E + R GV ++DM R G+ A L + +
Sbjct: 511 ARIGALMRGKE-IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA--LNQFNSQKKDVTA 567
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLE 543
W LL G LA ++ +LE
Sbjct: 568 WNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 10/405 (2%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M +L + ++ + L++ C A E +++ LV L V +G+AL++ +++
Sbjct: 88 MLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGN 147
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ +A VF ++ RDV WN +V GYA+ G F +AL ++ RM I + +T VL
Sbjct: 148 LLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKT 207
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G+ +H V++ G++S V V NALI MY K + A +F+ M ++D SW
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N++++ + + G L LF M PDL+T +TV AC L GR +HGY+V
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK 327
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ D+ MNN+L+ MY+ G + +A+ VF++M KDV SW MI
Sbjct: 328 SEFG--------GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
+A++ + M + PDE+T V VLSAC+ G L G L + + G+V +
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVIVS 438
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+IDM + ++ A E+ + + N V W +L+ R++ +
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRS 482
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA +L G +H ++TG++ + SLI+MYSKC + AL VF N+
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + NV ++ ++I G N+ +F+ L FF M++ + P+ T ++ C + A++
Sbjct: 462 SGK-NVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRG 519
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + G+ D ++ +A+++ Y++C AL F +DV WN ++ GYAQ
Sbjct: 520 KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQ 578
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGVPV 272
G+ A+E+F +M + I T +L A G G I+ K +
Sbjct: 579 GQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKH 638
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
++D+ G+ + +A + + M D W +++
Sbjct: 639 YACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/586 (36%), Positives = 338/586 (57%), Gaps = 11/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA +++ +G+EIH++++R G +LI MY KC + A +F+ + + +
Sbjct: 205 LKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMP-KRD 263
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMISG++ N +GL+ F+ MR+L V PD T + C + + +HG
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHG 323
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K D+ + ++L+ Y +EEA VF + +DVV W AM+ K
Sbjct: 324 YVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFK 383
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E ++ M EGI T+ VLSA +G G +H I +K G S V V N+LID
Sbjct: 384 AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLID 443
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K KCV ALE+F + K++ SW S++ + + N LF R + +P+ VT
Sbjct: 444 MYSKCKCVDNALEVFRNISGKNVVSWTSLI-LGLRINNRSFEALLFFRQMKESMKPNSVT 502
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ + ALM G++IH + + G+ +G F+ NA++DMY +CG A
Sbjct: 503 LISVLSACARIGALMRGKEIHAHALRTGVGFDG--------FLPNAILDMYVRCGRKVPA 554
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F KKDV +WNI++ GY GQ K A+++F M E ++ PDE+TF+ +L ACS S
Sbjct: 555 LNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS 613
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G +++G E+ +M+++Y + P ++HY CV+D+LGRAGQL++AY+ MP + +W
Sbjct: 614 GMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGA 673
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H N +L EIAA+RVF+ + G Y+L+ N+Y G +++V +R MR++ +
Sbjct: 674 LLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+PGCSW+E+K +H F+S D SH ++K I L ++++E+G
Sbjct: 734 SADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENG 779
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 13/508 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA L+LC + +G ++ + + +L++M+ + + A +VF +S
Sbjct: 101 IALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMS- 159
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E +VF++N ++ G+ + L+ ++ M + P+ YTFP ++K C V + K+
Sbjct: 160 ERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKE 219
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH V + G + DV +G+AL+ Y+KC + A +F+++P RD + WNAM++GY + G
Sbjct: 220 IHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGG 279
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ LE+F M + + T+T V SA ++ + GR VHG VVK + + + N+
Sbjct: 280 GLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNS 339
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI MY + EA +F ME KD+ SW +++ + + M G PD
Sbjct: 340 LIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPD 399
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+T +VL AC+ + L G ++H + GL + V ++N+L+DMY+KC +
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGL--------VSHVIVSNSLIDMYSKCKCV 451
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A VF +S K+V SW +ILG ++ + EAL F M E+ +KP+ VT + VLSAC
Sbjct: 452 DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSAC 510
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ G L +G+E + R GV ++DM R G+ A L + +
Sbjct: 511 ARIGALMRGKE-IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPA--LNQFNSQKKDVTA 567
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLE 543
W LL G LA ++ +LE
Sbjct: 568 WNILLTGYAQQGQAKLAVELFDKMLELE 595
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 206/405 (50%), Gaps = 10/405 (2%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M +L + ++ + L++ C A E +++ LV L V +G+AL++ +++
Sbjct: 88 MLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGN 147
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ +A VF ++ RDV WN +V GYA+ G F +AL ++ RM I + +T VL
Sbjct: 148 LLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKT 207
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G+ +H V++ G++S V V NALI MY K + A +F+ M ++D SW
Sbjct: 208 CAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISW 267
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N++++ + + G L LF M PDL+T +TV AC L GR +HGY+V
Sbjct: 268 NAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVK 327
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ D+ MNN+L+ MY+ G + +A+ VF++M KDV SW MI
Sbjct: 328 SEFG--------GDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
+A++ + M + PDE+T V VLSAC+ G L G L + + G+V +
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVIVS 438
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+IDM + ++ A E+ + + N V W +L+ R++ +
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLILGLRINNRS 482
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 5/278 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA +L G +H ++TG++ + SLI+MYSKC + AL VF N+
Sbjct: 402 TLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI 461
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + NV ++ ++I G N+ +F+ L FF M++ + P+ T ++ C + A++
Sbjct: 462 SGK-NVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRG 519
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + G+ D ++ +A+++ Y++C AL F +DV WN ++ GYAQ
Sbjct: 520 KEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQ 578
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGVPV 272
G+ A+E+F +M + I T +L A G G I+ K +
Sbjct: 579 GQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKH 638
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
++D+ G+ + +A + + M D W +++
Sbjct: 639 YACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLN 676
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/591 (37%), Positives = 342/591 (57%), Gaps = 12/591 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A +Q C +L+ G+ +H+ ++ G TSL+NMY+K ++ + +VFN ++ E
Sbjct: 226 AIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT-E 284
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++NAMISG SN + D F M+ P+ YT + K ++ V K++
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV--LWNAMVNGYAQIG 214
+LG++ +V +G+AL++ Y KC + +A VF+ + V WNAM++GY+Q G
Sbjct: 345 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 404
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVPVM 273
+ALE++ +M + GI +T V +A+ + GRVVHG+V+K G D V V
Sbjct: 405 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 464
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA+ D Y K + + ++F+ MEE+DI SW +++T + Q + L F M GF
Sbjct: 465 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 524
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ TFS+VL +C+ L L +GRQ+HG + GL C + +AL+DMY KCG
Sbjct: 525 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE-KC-------IESALIDMYAKCG 576
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +A VF K+S D+ SW +I GY G ++AL +F M + +K + VT + VL
Sbjct: 577 SITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLF 636
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G + ME YGVVP +EHY C+ID+LGR G+L++A E MP E N
Sbjct: 637 ACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 696
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+VW+TLL R+HGN +L EIAA+++ + P + YVL+SN Y+ G YE+ L +R+ M
Sbjct: 697 MVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 756
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ Q V+K PG SWI +K +H F S D+ HP+ K IY +L L +++ G
Sbjct: 757 KDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIKAMG 807
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 266/541 (49%), Gaps = 23/541 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--TSLINMYSKCCQMKYALFVFNNL 93
I L+ CA + ++++ + +H +L++ D L + ++YSKC + + A VF+ +
Sbjct: 122 IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 181
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NVF++ MI G + F G FF M G+LPDK+ + +I+ C + ++
Sbjct: 182 P-QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + G +++ ++L+N Y K +E++ VF + + V WNAM++G
Sbjct: 241 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A ++F RM + +T+ V A+ + G+ V ++G + V V
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 360
Query: 274 NALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
ALIDMY K + +A +F+ + WN++++ + Q G L L+ +M G
Sbjct: 361 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 420
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
DL T+ +V A + +L GR +HG ++ GL D+ V +NNA+ D Y+K
Sbjct: 421 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGL-------DLMVVSVNNAIADAYSK 473
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + D + VF +M ++D+ SW ++ Y G+EAL F M E P++ TF V
Sbjct: 474 CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSV 533
Query: 452 LSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L +C+ FL GR+ L+ ++ IE + +IDM + G + EA ++ + N
Sbjct: 534 LISCASLCFLEYGRQVHGLLCKAGLDTEKCIE--SALIDMYAKCGSITEAGKVFDKISN- 590
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE-PGHCGNYVLMSNIYVA---GGKYEEV 566
+ V W +++ HG L E A Q ++E G N V + + A GG EE
Sbjct: 591 PDIVSWTAIISGYAQHG---LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 647
Query: 567 L 567
L
Sbjct: 648 L 648
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/586 (37%), Positives = 323/586 (55%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA+ + G+ IH +LR+GI + +L+NMY +C + A VF +
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-D 496
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+MI+G + F M+ + PD TF ++ C + A+ K+IHG
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG 556
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + GL LDV +G+AL+N Y++C +++A VF L RDV+ W AM+ G A GE K
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E+F +M EG + T + +L G+ V ++ GY+ V NALI
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + +A E+F+ M +DI SWN I+ + Q G + +M P+ +
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFS 736
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L ACS +AL G+++H IV L DV + AL+ MY KCGS +A
Sbjct: 737 FVSLLNACSSFSALEEGKRVHAEIVKRKLQ--------GDVRVGAALISMYAKCGSQGEA 788
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q VF + +K+V +WN MI Y G +AL F+CM + +KPD TF +LSAC+H+
Sbjct: 789 QEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHA 848
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G + MES YGV+PTIEHY C++ +LGRA + EA L MP + VW T
Sbjct: 849 GLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWET 908
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+HGN LAE AA +L + Y+L+SN+Y A G++++V IR M + +
Sbjct: 909 LLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGI 968
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PG SWIE+ + +H FI++DRSHPE IYAEL L+ + E G
Sbjct: 969 RKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 1014
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 249/467 (53%), Gaps = 10/467 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L C L+ G++IHS +++ G P SL++MY KC + A VF +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S +V +YN M+ + + + L F M G+ PDK T+ L+ + E
Sbjct: 190 SPR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L + GL+ D+ +G+ALV ++C ++ A + F+ RDVV++NA++ AQ
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQH 308
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A E + RM +G+ ++R T +L+A + G+++H + + G+ S V +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI MY + + +A E+F M ++D+ SWN+I+ + + + +RL+ +M S G +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P VTF +L AC++ +A G+ IH I+ +G+ NG + NALM+MY +CG
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNG--------HLANALMNMYRRCG 480
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +AQ VF +DV SWN MI G+ G + A +F M +L+PD +TF VLS
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
C + L G++ + + G+ + +I+M R G L +A
Sbjct: 541 GCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDA 586
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 266/497 (53%), Gaps = 16/497 (3%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L +G+ IH + G+ T+L+ M +C + A F + + +V YNA+I+
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG-TADRDVVVYNALIA 303
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + + + MR GV ++ T+ ++ C A+ K IH + + G
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSS 363
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV IG+AL++ Y +C + +A ++F +P RD++ WNA++ GYA+ + +A+ ++++M
Sbjct: 364 DVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQ 423
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
EG+ R T +LSA + +G+++H +++ G S + NAL++MY + +
Sbjct: 424 SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLM 483
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
EA +FE + +D+ SWNS++ H Q G+++ +LF M + +PD +TF++VL C
Sbjct: 484 EAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCK 543
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ AL G+QIHG I +GL DV + NAL++MY +CGS++DA+ VF +
Sbjct: 544 NPEALELGKQIHGRITESGLQL--------DVNLGNALINMYIRCGSLQDARNVFHSLQH 595
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+DV SW MI G G+ +A+++F M +P + TF +L C+ S L +G++
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKV 655
Query: 468 LP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ ++ S Y + + + +I ++G + +A E+ MP+ + V W ++A +
Sbjct: 656 IAYILNSGYELDTGVGN--ALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQN 712
Query: 527 GNTDLAEIAAQRVFQLE 543
G L + A + +Q++
Sbjct: 713 G---LGQTAVEFAYQMQ 726
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 243/500 (48%), Gaps = 11/500 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT +A LQ C + L + + IH+ M+ + LINMY KC + A VF
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V ++N++IS + F K F M+ G +P+K T+ ++ C +
Sbjct: 88 MP-RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN 146
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
KKIH + K G D + ++L++ Y KC + A +VF + RDVV +N M+ YAQ
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ L +F +MS EGI + T +L A G+ +H + V+ G +S + V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ M + V A + F+ ++D+ +N+++ Q G++ + RM S G
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ T+ ++L ACS AL G+ IH +I +G + DV + NAL+ MY +C
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS--------SDVQIGNALISMYARC 378
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A+ +F M K+D+ SWN +I GY EA+ ++ M +KP VTF+ +L
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC++S + G+ + R G+ +++M R G L EA + +
Sbjct: 439 SACANSSAYADGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGSLMEAQNV-FEGTQARD 496
Query: 513 PVVWRTLLAASRLHGNTDLA 532
+ W +++A HG+ + A
Sbjct: 497 VISWNSMIAGHAQHGSYETA 516
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 198/389 (50%), Gaps = 10/389 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
++ T+ L++ C + E K+IH + + + D+++ + L+N Y+KC+ + +A +VF
Sbjct: 26 ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P RDV+ WN++++ YAQ G KA ++F M G ++ T +L+A +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
NG+ +H ++K GY V N+L+ MYGK + A ++F + +D+ S+N+++ ++
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
Q L LF +M S G PD VT+ +L A + + L G++IH V GL
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN---- 261
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D+ + AL+ M +CG + A+ F + +DV +N +I G EA +
Sbjct: 262 ----SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
+ M + + T++ +L+ACS S L G+ + S G ++ +I M
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGK-LIHSHISEDGHSSDVQIGNALISMYA 376
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLA 521
R G L +A EL MP + + W ++A
Sbjct: 377 RCGDLPKARELFYTMPKR-DLISWNAIIA 404
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 350/617 (56%), Gaps = 12/617 (1%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
P S+ F QT + T A+ L +CA + + G ++H ++ G PL
Sbjct: 54 PNSAVKVFEDMRNCQTKPNSITFASV---LSICASEALSEFGNQLHGLVISCGFHFDPLV 110
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG 129
+L+ MYSK Q+ AL +FN + + NV T+N MI+GF N F + F+ M G
Sbjct: 111 ANALVAMYSKFGQLSDALKLFNTMP-DTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAG 169
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
V PD TF + + ++ + K+IHG + + G+ LDV++ SAL++ Y KC+ + A
Sbjct: 170 VSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMAC 229
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
K+F++ D+V+ A+++GY G + ALE+FR + +E + + T+ VL A +
Sbjct: 230 KIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLA 289
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +H ++K G D V +A++DMY K + A +IF M EKD WN+I+T
Sbjct: 290 TLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIIT 349
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q G + LF +M G D V+ S L AC++L AL HG+ IH +++
Sbjct: 350 NCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDS 409
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+VF +AL+DMY KCG++ A+ VF M +K+ SWN +I YG G + +
Sbjct: 410 --------EVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVS 461
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
L +F M E ++PD VTF+ +LSAC H+G + +G ++ M YG+ +EHY C++D
Sbjct: 462 LALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVD 521
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ GRAG+LNEA+E MP + VW TLL A R+HGN +LAE+A++ + L+P + G
Sbjct: 522 LFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGC 581
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
YVL+SN++ G++ V IR M+++ V+K PG SWIE+ H F+++D SHPE+ I
Sbjct: 582 YVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQI 641
Query: 610 YAELHSLTARLREHGDC 626
Y+ L++L LR+ G C
Sbjct: 642 YSVLNNLLLELRKEGYC 658
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 240/492 (48%), Gaps = 13/492 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+SLI +Y++ ++ A +F+ + + V +N M++GF + F MR
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVL-WNVMLNGFVKCGEPNSAVKVFEDMRNCQT 69
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P+ TF ++ C ++HGLV G D + +ALV Y K + +ALK
Sbjct: 70 KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALK 129
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F +P +VV WN M+ G+ Q G +A +F M G+ T L ++
Sbjct: 130 LFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESAS 189
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
K G+ +HG +++ G V + +ALID+Y K + VG A +IF+ DI +I++
Sbjct: 190 LKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISG 249
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ G ++ L +F +L P+ VT ++VLPAC+ LA L G+++H I+ +GL +
Sbjct: 250 YVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDER 309
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+ +A+MDMY KCG + A +F +M +KD WN +I +G+ +EA+
Sbjct: 310 RH--------VGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
D+F M L D V+ LSAC++ L G+ M + + + +IDM
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM-IKGAFDSEVFAESALIDM 420
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCG 548
G+ G L+ A M E N V W +++AA HG+ +++ ++ + ++P H
Sbjct: 421 YGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVT 479
Query: 549 NYVLMSNIYVAG 560
++S AG
Sbjct: 480 FLTILSACGHAG 491
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 204/370 (55%), Gaps = 10/370 (2%)
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
+G ++D ++GS+L+ Y + +E+A ++F+++P +D VLWN M+NG+ + GE + A++V
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F M + T VLS + G +HG+V+ G+ V NAL+ MY K
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ +AL++F M + ++ +WN ++ Q G D LF M+SAG PD +TF++
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LP+ + A+L G++IHGYI+ +G+A DVF+ +AL+D+Y KC + A +F
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIAL--------DVFLKSALIDIYFKCRDVGMACKIF 232
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ + D+ +I GY ++G +AL++F + E K+ P+ VT VL AC+ L+
Sbjct: 233 KQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLN 292
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G+E L ++G+ + ++DM + G+L+ AY++ MP E + V W ++
Sbjct: 293 LGKE-LHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITN 350
Query: 523 SRLHGNTDLA 532
+G A
Sbjct: 351 CSQNGKPQEA 360
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 337/591 (57%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C+ L G+E+H ++ G+ ++ +LI+MY+KC ++ A VF+ +
Sbjct: 147 TFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAM 206
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V ++ + + + +A + L ++ M Q GV P + T+ ++ C + A+ +
Sbjct: 207 ASRDEV-SWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKG 265
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + + DV + +AL Y+KC +++A +VFE LP RDV+ WN M+ G
Sbjct: 266 KQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDS 325
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ +A +F RM KE + R T +LSA G G+ +H VK G S V
Sbjct: 326 GQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFG 385
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI+MY K + +A ++F+ M ++D+ SW +++ + CG + F +ML G +
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ +T+ VL ACS+ AL G++IH +V G+ D+ + NALM MY KCG
Sbjct: 446 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGI--------FADLAVANALMSMYFKCG 497
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA V MS +DV +WN +I G +G+G EAL F M +++P+ TFV V+S
Sbjct: 498 SVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC + +GR M YG+VPT +HY C++D+L RAG L EA ++ L MP + +
Sbjct: 558 ACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSA 617
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LLAA R HGN ++ E AA++ +LEP + G YV +S IY A G + +V +R M
Sbjct: 618 AMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLM 677
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ V+K PG SWIE+ +H+F++ D+SHP + IY+EL +LT +++ G
Sbjct: 678 KERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLG 728
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 254/482 (52%), Gaps = 11/482 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C +L G+++H ++LR G+ + I +L+ +Y C + A +F+ S +
Sbjct: 51 LQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFS-NKS 109
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N MISG+ + + F M+Q G+ PDK+TF ++ C A+ +++H
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + GL + +G+AL++ Y KC + +A +VF+ + RD V W + YA+ G +
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L+ + M +EG+ SR T VLSA + + G+ +H +V+ + S V V AL
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V +A E+FE + +D+ +WN+++ G + +F RML PD VT
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +L AC+ L G++IH V +GL + DV NAL++MY+K GSM+DA
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGL--------VSDVRFGNALINMYSKAGSMKDA 401
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF +M K+DV SW ++ GY GQ E+ F M + ++ +++T++ VL ACS+
Sbjct: 402 RQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNP 461
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+E + + G+ + ++ M + G + +A ++ M + V W T
Sbjct: 462 VALKWGKEIHAEV-VKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNT 519
Query: 519 LL 520
L+
Sbjct: 520 LI 521
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 213/410 (51%), Gaps = 10/410 (2%)
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
S D + D ++ Q G D Y + L++ C + K++H + + G+ +VY
Sbjct: 21 STDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVY 80
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
I + L+ Y+ C + EA ++F++ + VV WN M++GYA G +A +F M +EG
Sbjct: 81 IINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEG 140
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +FT +LSA GR VH V++ G + V NALI MY K V +A
Sbjct: 141 LEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDAR 200
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ M +D SW ++ + + G +L+ + ML G +P +T+ VL AC LA
Sbjct: 201 RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLA 260
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH IV + DV ++ AL MY KCG+++DA+ VF + +DV
Sbjct: 261 ALEKGKQIHAQIV--------ESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV 312
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI G GQ +EA MF M + + PD VT++ +LSAC+ G L+ G+E +
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKE-IHA 371
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G+V + +I+M +AG + +A ++ MP + V W L+
Sbjct: 372 RAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTALV 420
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/586 (36%), Positives = 329/586 (56%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C + + G+ IH +LR+GI + +L+NMY +C + A VF +
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-D 551
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N+MI+G + F M++ G+ PDK TF ++ C + A+ ++IH
Sbjct: 552 IISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHM 611
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L+ + GL LDV +G+AL+N Y++C +++A +VF L R+V+ W AM+ G+A GE K
Sbjct: 612 LIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRK 671
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A E+F +M +G + T + +L A + G+ V ++ GY+ V NALI
Sbjct: 672 AFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALIS 731
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + +A ++F+ M +DI SWN ++ + Q G L+ +M G + +
Sbjct: 732 AYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L ACS +AL G+++H IV + DV + AL+ MY KCGS+ +A
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVKRKMQ--------GDVRVGAALISMYAKCGSLEEA 843
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q VF ++K+V +WN MI Y G +ALD F+CM + +KPD TF +LSAC+HS
Sbjct: 844 QEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHS 903
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G +ES++G+ PTIEHY C++ +LGRAG+ EA L MP + VW T
Sbjct: 904 GLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWET 963
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+HGN LAE AA +L + YVL+SN+Y A G++++V IR M + +
Sbjct: 964 LLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGI 1023
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PG SWIE+ + +H FI++DRSHPE IY EL L+ + G
Sbjct: 1024 RKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAG 1069
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/488 (31%), Positives = 258/488 (52%), Gaps = 13/488 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L C L+ G++IHS ++ G P SL+NMY KC + A VF+ +
Sbjct: 185 TYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI 244
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V +YN M+ + + + + F M G+ PDK T+ L+ + E
Sbjct: 245 Y-RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEG 303
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L GL+ D+ +G+AL +++C + A + E RDVV++NA++ AQ
Sbjct: 304 KRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQH 363
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + +A E + +M +G+ M+R T VL+A G ++H + ++G+ S V +
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIG 423
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N+LI MY + + A E+F M ++D+ SWN+I+ + + + ++L+ +M S G +
Sbjct: 424 NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P VTF +L AC++ +A G+ IH I+ +G+ NG + NALM+MY +CG
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNG--------HLANALMNMYRRCG 535
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +AQ VF +D+ SWN MI G+ G + A +F M + L+PD++TF VL
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 454 ACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
C + L GR+ + ++ES G+ + +I+M R G L +AYE+ ++ + N
Sbjct: 596 GCKNPEALELGRQIHMLIIES--GLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHR-N 652
Query: 513 PVVWRTLL 520
+ W ++
Sbjct: 653 VMSWTAMI 660
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 267/500 (53%), Gaps = 22/500 (4%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM---KYALFVFNNLSCEPNVFTYNA 104
L +G+ IH + G+ T+L M+ +C + K AL F + +V YNA
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAF----ADRDVVVYNA 355
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+I+ + + + + MR GV+ ++ T+ ++ C A+ + IH + ++G
Sbjct: 356 LIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG 415
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DV IG++L++ Y +C + A ++F +P RD++ WNA++ GYA+ + +A+++++
Sbjct: 416 HSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYK 475
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+M EG+ R T +LSA + +G+++H +++ G S + NAL++MY +
Sbjct: 476 QMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCG 535
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ EA +FE +DI SWNS++ H Q G+++ +LF M G +PD +TF++VL
Sbjct: 536 SIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLV 595
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
C + AL GRQIH I+ +GL DV + NAL++MY +CGS++DA VF
Sbjct: 596 GCKNPEALELGRQIHMLIIESGLQL--------DVNLGNALINMYIRCGSLQDAYEVFHS 647
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ ++V SW MI G+ G+ ++A ++F M KP + TF +L AC S L +G
Sbjct: 648 LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEG 707
Query: 465 REFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++ + ++ S Y + + + +I ++G + +A ++ MPN + + W ++A
Sbjct: 708 KKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGY 764
Query: 524 RLHGNTDLAEIAAQRVFQLE 543
+G L A Q +Q++
Sbjct: 765 AQNG---LGGTALQFAYQMQ 781
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/494 (28%), Positives = 239/494 (48%), Gaps = 11/494 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+Q C + +L + + IH+ M+ G+ LINMY KC + A VF + +
Sbjct: 89 VQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP-RRD 147
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++IS + F K F M+ G +P K T+ ++ CC + KKIH
Sbjct: 148 VISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHS 207
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G D + ++L+N Y KC+ + A +VF + RDVV +N M+ YAQ +
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ +F +MS EGI + T +L A G+ +H + V G +S + V AL
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
M+ + V A + E ++D+ +N+++ Q G+++ + +M S G + T
Sbjct: 328 MFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTT 387
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL ACS AL G IH +I G + DV + N+L+ MY +CG + A
Sbjct: 388 YLSVLNACSTSKALGAGELIHSHISEVGHS--------SDVQIGNSLISMYARCGDLPRA 439
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F M K+D+ SWN +I GY EA+ ++ M +KP VTF+ +LSAC++S
Sbjct: 440 RELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNS 499
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
S G+ + R G+ +++M R G + EA + + + W +
Sbjct: 500 SAYSDGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGSIMEAQNV-FEGTRARDIISWNS 557
Query: 519 LLAASRLHGNTDLA 532
++A HG+ + A
Sbjct: 558 MIAGHAQHGSYEAA 571
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 10/402 (2%)
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
D N + ++ + L++ C ++ E K+IH + + G+ D+++ + L+N Y
Sbjct: 68 DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMY 127
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
+KC+ + +A +VF ++P RDV+ WN++++ YAQ G KA ++F M G S+ T
Sbjct: 128 VKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYI 187
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+L+A + G+ +H +++ GY V N+L++MYGK + + A ++F + +
Sbjct: 188 SILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR 247
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D+ S+N+++ ++ Q + + LF +M S G PD VT+ +L A + + L G++IH
Sbjct: 248 DVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
V GL D+ + AL M+ +CG + A+ + +DV +N +I
Sbjct: 308 KLAVNEGLN--------SDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G +EA + + M + + T++ VL+ACS S L G E + S G
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG-ELIHSHISEVGHSS 418
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
++ +I M R G L A EL MP + + W ++A
Sbjct: 419 DVQIGNSLISMYARCGDLPRARELFNTMPKR-DLISWNAIIA 459
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 330/577 (57%), Gaps = 9/577 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ + IH+ +LR G+ + + ++ Y+ + + EPN+F +N MI
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTK-EPNIFLFNTMIR 81
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G ND + ++ ++ MR+ G+ PD +TFP ++K C V+ K+H LV K G +
Sbjct: 82 GLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D ++ +L+N Y KC F++ A KVF+++P ++ W A ++GY +G+ +A+++FRR+
Sbjct: 142 DAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ F++ VLSA G ++G + + + G V V AL+D YGK +
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F+ M EK+I SW+S++ + G L LF +ML+ G +PD VL +C+
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L AL G I NG+ + +D+ + AL+DMY KCG M A VF M K
Sbjct: 322 RLGALELGDWASNLI-------NGN-EFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRK 373
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD WN I G M G K+AL +F M ++ +KPD TFVG+L AC+H+G + +GR +
Sbjct: 374 KDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRY 433
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
ME + + P IEHY C++D+LGRAG L+EA++L +MP EAN +VW LL RLH
Sbjct: 434 FNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHR 493
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+T L E+ +++ LEP H GNYVL+SNIY A K+EE IR M ++ V+K PG SWI
Sbjct: 494 DTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ +H F+ D SHP ++ IYA+L L L+ G
Sbjct: 554 EVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAG 590
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 169/334 (50%), Gaps = 8/334 (2%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+F PF L + CA + + G ++HS +++ G SLIN+Y+KC +
Sbjct: 107 DSFTFPFVL-------KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFI 159
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+++ + N ++ A ISG+ + +D F + ++G+ PD ++ ++
Sbjct: 160 DNAFKVFDDIP-DKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSA 218
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + I + + G+ +V++ +ALV+ Y KC ME A VF+ + +++V W
Sbjct: 219 CKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSW 278
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
++M+ GYA G +AL++F +M EG+ + + GVL + +G + G ++
Sbjct: 279 SSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLING 338
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ + ALIDMY K + A E+F M +KD WN+ ++ G+ L L
Sbjct: 339 NEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGL 398
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
F +M +G +PD TF +L AC+H + GR+
Sbjct: 399 FGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRR 432
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 139/280 (49%), Gaps = 13/280 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ L C +L+ G+ I Y+ G++ + T+L++ Y KC M+ A VF+ +
Sbjct: 213 VEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGM-L 271
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E N+ ++++MI G+ SN + LD F M G+ PD Y ++ C C + LE+
Sbjct: 272 EKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL-CSCARLGALELGD 330
Query: 156 -----IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
I+G F LD V +G+AL++ Y KC M+ A +VF + +D V+WNA ++G
Sbjct: 331 WASNLINGNEF---LDNSV-LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGL 386
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSG 269
A G AL +F +M K GI R T G+L A G + G R + +
Sbjct: 387 AMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPE 446
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ ++D+ G+ C+ EA ++ + M E + W +++
Sbjct: 447 IEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALL 486
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 358/643 (55%), Gaps = 53/643 (8%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
+TSS ++F+ P I+ L+ C LQ ++H ++ G+ +P+ ++
Sbjct: 6 ATSSALKSFSPP--THPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTF- 59
Query: 78 SKCCQMKYALF-----VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
CC +Y F +F+ + EPN+F +N MI G+ DF G+ + M + GV P
Sbjct: 60 --CCTHEYGDFQYARRLFDEIP-EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKP 116
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D+YTFP L K +A+ +++HG V K GL +V++ +ALV YL C ++ A VF
Sbjct: 117 DRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF 176
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ P DV+ WN +++ Y ++G+F ++ +F M + + + T+ VLSA + +
Sbjct: 177 DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLR 236
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ VH V +S + + NA+IDMY + AL IF M +DI SW +I++
Sbjct: 237 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 296
Query: 313 QCGNHD-------------------------------GTLRLFDRMLSAGFQPDLVTFST 341
G D L LF M + +PD T +
Sbjct: 297 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 356
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC+HL AL G I YI N + +D+F+ NAL+DMY KCG + A+ +
Sbjct: 357 VLTACAHLGALELGEWIRTYIDRNKIK--------NDLFVRNALIDMYFKCGDVDKAESI 408
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +MS++D +W MI+G ++G G++ALDMFS M +A + PDE+T++GVLSAC+H+G +
Sbjct: 409 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 468
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+GR++ M S++G+ P I HY C++D+L RAG+L EAYE+ MP +AN +VW LLA
Sbjct: 469 DKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA 528
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
R++ +D+AE+ +++ +LEP + YVL+ NIY A ++ ++ ++R M + ++K
Sbjct: 529 GCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKT 588
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCS IE+ +H F++ DRSHP+ K+I A+L +T L+ G
Sbjct: 589 PGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAG 631
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 341/588 (57%), Gaps = 12/588 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A +Q C +L+ G+ +H+ ++ G TSL+NMY+K ++ + +VFN ++ E
Sbjct: 172 AIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMT-E 230
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++NAMISG SN + D F M+ P+ YT + K ++ V K++
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 290
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV--LWNAMVNGYAQIG 214
+LG++ +V +G+AL++ Y KC + +A VF+ + V WNAM++GY+Q G
Sbjct: 291 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSG 350
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVPVM 273
+ALE++ +M + GI +T V +A+ + GRVVHG+V+K G D V V
Sbjct: 351 CSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVN 410
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA+ D Y K + + ++F+ MEE+DI SW +++T + Q + L F M GF
Sbjct: 411 NAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFA 470
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ TFS+VL +C+ L L +GRQ+HG + GL C + +AL+DMY KCG
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTE-KC-------IESALIDMYAKCG 522
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +A VF K+S D+ SW +I GY G ++AL +F M + +K + VT + VL
Sbjct: 523 SITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLF 582
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G + ME YGVVP +EHY C+ID+LGR G+L++A E MP E N
Sbjct: 583 ACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNE 642
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+VW+TLL R+HGN +L EIAA+++ + P + YVL+SN Y+ G YE+ L +R+ M
Sbjct: 643 MVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 702
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+ Q V+K PG SWI +K +H F S D+ HP+ K IY +L L +++
Sbjct: 703 KDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 266/541 (49%), Gaps = 23/541 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--TSLINMYSKCCQMKYALFVFNNL 93
I L+ CA + ++++ + +H +L++ D L + ++YSKC + + A VF+ +
Sbjct: 68 IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 127
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NVF++ MI G + F G FF M G+LPDK+ + +I+ C + ++
Sbjct: 128 P-QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + G +++ ++L+N Y K +E++ VF + + V WNAM++G
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A ++F RM + +T+ V A+ + G+ V ++G + V V
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 306
Query: 274 NALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
ALIDMY K + +A +F+ + WN++++ + Q G L L+ +M G
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG 366
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
DL T+ +V A + +L GR +HG ++ GL D+ V +NNA+ D Y+K
Sbjct: 367 ITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGL-------DLMVVSVNNAIADAYSK 419
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + D + VF +M ++D+ SW ++ Y G+EAL F M E P++ TF V
Sbjct: 420 CGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSV 479
Query: 452 LSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L +C+ FL GR+ L+ ++ IE + +IDM + G + EA ++ + N
Sbjct: 480 LISCASLCFLEYGRQVHGLLCKAGLDTEKCIE--SALIDMYAKCGSITEAGKVFDKISN- 536
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE-PGHCGNYVLMSNIYVA---GGKYEEV 566
+ V W +++ HG L E A Q ++E G N V + + A GG EE
Sbjct: 537 PDIVSWTAIISGYAQHG---LVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEG 593
Query: 567 L 567
L
Sbjct: 594 L 594
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/621 (36%), Positives = 344/621 (55%), Gaps = 53/621 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQM 83
NHP SL L + LQ + IH+ M++TG+ ++ +++ LI + +
Sbjct: 2 NHP--------SLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGL 53
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA+ VF+++ EPN+ +N M G + L + M LG++P+ YTFP L+K
Sbjct: 54 TYAISVFDSIQ-EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE---------- 193
C A E ++IHG V KLG DLD+Y+ ++L+ Y+K E+A KVF+
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172
Query: 194 ---------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
E+P++DVV WNA+++GYA+ G + +ALE+F+ M K +
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ VLSA + GR VH + G+ S + ++NALID+Y K V A +
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
FE + KD+ SWN+++ + + L LF ML +G P+ VT ++LPAC+HL A+
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAI 352
Query: 353 MHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
GR IH YI + G++ S + +L+DMY KCG + AQ VF M + +
Sbjct: 353 DIGRWIHVYIDKRLKGVSNPSS--------LRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+SWN MI G+ M G+ A D+FS M + ++PD++TFVG+LSACSHSG L GR
Sbjct: 405 SSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M Y + P +EHY C+ID+LG +G EA E+ +M + + V+W +LL A ++HGN +
Sbjct: 465 MTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AQ + ++EP + G+YVL+SNIY G++ EV R + + ++K PGCS IE+
Sbjct: 525 LGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEID 584
Query: 591 DGLHTFISSDRSHPEAKSIYA 611
+H FI D+ HP + IY
Sbjct: 585 SVVHEFIIGDKLHPRNREIYG 605
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 358/643 (55%), Gaps = 53/643 (8%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
+TSS ++F+ P I+ L+ C LQ ++H ++ G+ +P+ ++
Sbjct: 27 ATSSALKSFSPP--THPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTF- 80
Query: 78 SKCCQMKYALF-----VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
CC +Y F +F+ + EPN+F +N MI G+ DF G+ + M + GV P
Sbjct: 81 --CCTHEYGDFQYARRLFDEIP-EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKP 137
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D+YTFP L K +A+ +++HG V K GL +V++ +ALV YL C ++ A VF
Sbjct: 138 DRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVF 197
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ P DV+ WN +++ Y ++G+F ++ +F M + + + T+ VLSA + +
Sbjct: 198 DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLR 257
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ VH V +S + + NA+IDMY + AL IF M +DI SW +I++
Sbjct: 258 TGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317
Query: 313 QCGNHD-------------------------------GTLRLFDRMLSAGFQPDLVTFST 341
G D L LF M + +PD T +
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC+HL AL G I YI N + +D+F+ NAL+DMY KCG + A+ +
Sbjct: 378 VLTACAHLGALELGEWIRTYIDRNKIK--------NDLFVRNALIDMYFKCGDVDKAESI 429
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +MS++D +W MI+G ++G G++ALDMFS M +A + PDE+T++GVLSAC+H+G +
Sbjct: 430 FREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLV 489
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+GR++ M S++G+ P I HY C++D+L RAG+L EAYE+ MP +AN +VW LLA
Sbjct: 490 DKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLA 549
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
R++ +D+AE+ +++ +LEP + YVL+ NIY A ++ ++ ++R M + ++K
Sbjct: 550 GCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKX 609
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCS IE+ +H F++ DRSHP+ K+I A+L +T L+ G
Sbjct: 610 PGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAG 652
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 336/591 (56%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +LQKG+++HSY+L+ G+ ++ SL+++Y KC ++ A +FN L
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-L 305
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV +N M+ + K + F M+ G+ P+K+T+PC+++ C +
Sbjct: 306 GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELG 365
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH L K G + D+Y+ L++ Y K + +++A K+ E L RDVV W +M+ GY Q
Sbjct: 366 EQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQH 425
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+AL F+ M G+W + SA + + G +H V GY + + +
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N L+++Y + EA +F ++ KD +WN +++ Q ++ L +F +M AG +
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAK 545
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
++ TF + + A ++LA + G+Q+HG V G + + NAL+ +Y KCG
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTG--------HTSETEVANALISLYGKCG 597
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA+M+F++MS ++ SWN +I G+G EALD+F M + LKP++VTF+GVL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G + M + YG+ P +HY CV+D+LGRAGQL+ A MP AN
Sbjct: 658 ACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANA 717
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++WRTLL+A ++H N ++ E+AA+ + +LEP +YVL+SN Y GK+ +R M
Sbjct: 718 MIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMM 777
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + +RK PG SWIE+K+ +H F DR HP + IY L L RL + G
Sbjct: 778 KDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 247/501 (49%), Gaps = 16/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ +++ C +G+ IH+ + + +LI +Y K A
Sbjct: 144 PYVLSSVLSA---CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 89 VF-NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + L C+ T+N +ISG L F+ M+ G+ PD T L+ C V
Sbjct: 201 VFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASV 258
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + K++H + K G+ D +L++ Y+KC +E A +F +VVLWN M+
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Y QI + K+ E+F +M GI ++FT +L G + G +H + +K G++
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V LIDMY K +C+ +A +I EM+E++D+ SW S++ + Q + L F M
Sbjct: 379 SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD + ++ AC+ + A+ G QIH + V+G A D+ + N L++
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA--------DISIWNTLVN 490
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y +CG +A +F ++ KD +WN +I G+G ++AL +F M +A K + T
Sbjct: 491 LYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFT 550
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ +SA ++ + QG++ + + G E +I + G+ G + +A ++ +
Sbjct: 551 FISAISALANLADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCGSIEDA-KMIFSE 608
Query: 508 PNEANPVVWRTLLAASRLHGN 528
+ N V W T++ + HG
Sbjct: 609 MSLRNEVSWNTIITSCSQHGR 629
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/479 (25%), Positives = 224/479 (46%), Gaps = 18/479 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ L LI++Y+K + A VF LS +V ++ AM+SG+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHV-SWVAMLSGYAQR 122
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ ++ M V+P Y ++ C + + IH V+K + ++G
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+ YL + A +VF ++ D V +N +++G+AQ G AL++F M G+
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
TV +L+A +G + G+ +H ++K G +L+D+Y K + A +I
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + + ++ WN ++ + Q + + +F +M + G P+ T+ +L C+ +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH + NG D++++ L+DMY+K + A+ + + K+DV S
Sbjct: 363 ELGEQIHSLSIKNGFE--------SDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVS 414
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY +EAL F M + + PD + SAC+ + QG L +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHA 471
Query: 473 SRY--GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA---SRLH 526
Y G I + ++++ R G+ EA+ L + ++ + + W L++ SRL+
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISGFGQSRLY 529
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 192/374 (51%), Gaps = 10/374 (2%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V +IH GL D IG+ L++ Y K + +A +VF+EL RD V W AM++GYAQ
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +A ++ +M + + + ++ VLSA F GR++H V K + S V
Sbjct: 122 RGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALI +Y A +F M D ++N++++ H QCG+ + L++FD M +G
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD VT +++L AC+ + L G+Q+H Y++ G++ D +L+D+Y KC
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF--------DYITEGSLLDLYVKC 293
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A +F + +V WN+M++ YG ++ ++F M + P++ T+ +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCIL 353
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
C+ +G + G + L + G + +IDM + L++A ++ L M + +
Sbjct: 354 RTCTCTGQIELGEQIHSL-SIKNGFESDMYVSGVLIDMYSKYRCLDKARKI-LEMLEKRD 411
Query: 513 PVVWRTLLAASRLH 526
V W +++A H
Sbjct: 412 VVSWTSMIAGYVQH 425
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 347/599 (57%), Gaps = 10/599 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T A+LQ C + ++ G +IH+ +L++G + +L+ MY + +M A +F NL
Sbjct: 162 TFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL 221
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ T+N+M++GF N + L+FF ++ + PD+ + +I + +L
Sbjct: 222 EGK-DIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K G D ++ +G+ L++ Y KC M + F+ + +D++ W GYAQ
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQN 340
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +ALE+ R++ EG+ + + +L A + + +HG ++ G V +
Sbjct: 341 KCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQ 399
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N +ID+YG+ + A+ IFE +E KD+ SW S+++ + G + L +F M G +
Sbjct: 400 NTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLE 459
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD VT ++L A L+ L G++IHG+I+ G GS ++N L+DMY +CG
Sbjct: 460 PDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGS--------ISNTLVDMYARCG 511
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA +FT +++ W MI YGM G G+ A+++F M + K+ PD +TF+ +L
Sbjct: 512 SVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLY 571
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG +++G+ FL +M+ Y + P EHYTC++D+LGR L EAY++ +M NE P
Sbjct: 572 ACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTP 631
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL A R+H N ++ E+AA+++ +L+ + GNYVL+SN++ A G++++V ++R M
Sbjct: 632 EVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRM 691
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
+ + KNPGCSWIE+ + +H F+S D+ HPE IY +L +T +L+ G A T F
Sbjct: 692 KGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKF 750
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/494 (30%), Positives = 249/494 (50%), Gaps = 11/494 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G EIH ++ G + SL+ +Y+KC + A +F+ + +
Sbjct: 65 LKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRND 124
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++IS + N + L F+ M + GV+ + YTF ++ C D + +IH
Sbjct: 125 VVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHA 184
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K G LDVY+ +ALV Y++ M EA +F L +D+V WN+M+ G+ Q G + +
Sbjct: 185 AILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSE 244
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE F + + + ++ ++ A +G+ NG+ +H +K G+DS + V N LID
Sbjct: 245 ALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLID 304
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ F++M KD+ SW + + Q + L L ++ G D
Sbjct: 305 MYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATM 364
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++L AC L L ++IHGY + GL+ D + N ++D+Y +CG + A
Sbjct: 365 IGSILLACRGLNCLGKIKEIHGYTIRGGLS---------DPVLQNTIIDVYGECGIIDYA 415
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F + KDV SW MI Y +G +AL++FS M E L+PD VT V +LSA
Sbjct: 416 VRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSL 475
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L +G+E + R G + ++DM R G + +AY++ N N ++W
Sbjct: 476 STLKKGKEIHGFI-IRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNR-NLILWTA 533
Query: 519 LLAASRLHGNTDLA 532
+++A +HG + A
Sbjct: 534 MISAYGMHGYGEAA 547
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 245/487 (50%), Gaps = 19/487 (3%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MY KC + A +F+ +S E ++FT+NAM+ G+ SN A L+ + MR LGV D Y
Sbjct: 1 MYGKCGSVLDAEMIFDKMS-ERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
TFP L+K C V + +IHGL K G D V++ ++LV Y KC + A K+F+ +
Sbjct: 60 TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 196 PLR-DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+R DVV WN++++ Y+ G +AL +F M K G+ + +T L A F K G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+H ++K G V V NAL+ MY + + EA IF +E KDI +WNS++T Q
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L F + +A +PD V+ +++ A L L++G++IH Y + NG N
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN---- 295
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ + N L+DMY KC M F M+ KD+ SW GY + +AL++
Sbjct: 296 ----ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLR 351
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
+ + D +L AC L + +E + R G+ + T +ID+ G
Sbjct: 352 QLQMEGMDVDATMIGSILLACRGLNCLGKIKE-IHGYTIRGGLSDPVLQNT-IIDVYGEC 409
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGHCGNYVL 552
G ++ A + ++ + + V W ++++ +G N L ++ + LEP +YV
Sbjct: 410 GIIDYAVRIFESIECK-DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEP----DYVT 464
Query: 553 MSNIYVA 559
+ +I A
Sbjct: 465 LVSILSA 471
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/594 (35%), Positives = 334/594 (56%), Gaps = 9/594 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
++ T + L C+ L+ G+E H+ +++ G + T+L++MY K M A VF
Sbjct: 161 SIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVF 220
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L + +V T+N MI G+ + K F M+Q G P++ +F ++ C A+
Sbjct: 221 DGLY-KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEAL 279
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K +H GL DV + +AL+ Y+ C +E A +VF+++ +RDVV W M+ GY
Sbjct: 280 AWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGY 339
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+ A +F M +EGI R T +++A R +H VV+ G+ + +
Sbjct: 340 AENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDL 399
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+ MY K + +A ++F+ M +D+ SW++++ + + G + F M
Sbjct: 400 LVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRN 459
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD+VT+ +L AC HL AL G +I+ + L + + + NAL++M
Sbjct: 460 NVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADL--------VSHIPVGNALINMNV 511
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K GS+ A+ +F M ++DV +WN+MI GY + G +EALD+F M + + +P+ VTFVG
Sbjct: 512 KHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVG 571
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACS +GF+ +GR F + G+VPT+E Y C++D+LGRAG+L+EA L MP +
Sbjct: 572 VLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLK 631
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N +W TLLAA R++GN D+AE AA+R EP YV +S++Y A G +E V +R
Sbjct: 632 PNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVR 691
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M + VRK GC+WIE++ LHTF+ DRSHP+A IYAEL L ++ G
Sbjct: 692 KVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREG 745
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 244/499 (48%), Gaps = 11/499 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + Q C + G+++ +++++G + + +LI ++S C M A F+++
Sbjct: 63 TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
V T+NA+I+G+ + F M + P TF ++ C +
Sbjct: 123 E-NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLG 181
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+ H V K+G D IG+ALV+ Y+K M+ A +VF+ L RDV +N M+ GYA+
Sbjct: 182 KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKS 241
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ KA ++F RM +EG +R + +L G+ VH + G V V
Sbjct: 242 GDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVA 301
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALI MY + A +F+ M+ +D+ SW ++ + + N + LF M G Q
Sbjct: 302 TALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQ 361
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T+ ++ AC+ A L R+IH +V G D+ ++ AL+ MY KCG
Sbjct: 362 PDRITYIHIINACASSADLSLAREIHSQVVRAGFGT--------DLLVDTALVHMYAKCG 413
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+++DA+ VF MS++DV SW+ MI Y +G G+EA + F M ++PD VT++ +L+
Sbjct: 414 AIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLN 473
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC H G L G E + +V I +I+M + G + A + M + +
Sbjct: 474 ACGHLGALDLGMEIYT-QAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMV-QRDV 531
Query: 514 VVWRTLLAASRLHGNTDLA 532
V W ++ LHGN A
Sbjct: 532 VTWNVMIGGYSLHGNAREA 550
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 208/391 (53%), Gaps = 12/391 (3%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T+ L + C + K++ + + G L++Y + L+ + C M EA + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ + + VV WNA++ GYAQ+G +A +FR+M E + S T VL A K
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ H V+K+G+ S + AL+ MY KG + A ++F+ + ++D+ ++N ++ +
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ G+ + +LF RM GF+P+ ++F ++L CS AL G+ +H + GL
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGL----- 294
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+DDV + AL+ MY CGS+ A+ VF KM +DV SW +MI GY + ++A +
Sbjct: 295 ---VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGL 351
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDML 491
F+ M E ++PD +T++ +++AC+ S LS RE ++ + +G ++ T ++ M
Sbjct: 352 FATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD--TALVHMY 409
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G + +A ++ AM + V W ++ A
Sbjct: 410 AKCGAIKDARQVFDAMSRR-DVVSWSAMIGA 439
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 342/586 (58%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C +L++G+EIH ++ + ++T ++NMY+KC Q+ A +F+ + E +
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP-ERD 212
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +I+GF N FA K L+ M+ G PD T ++ DV ++ K IHG
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHG 272
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G V I +AL + Y KC +E A +F+ + + VV WN+M++GY Q GE K
Sbjct: 273 YAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK 332
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ VF +M +EGI + T+ L A +G + G+ VH V ++ S + VMN+LI
Sbjct: 333 AIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLIS 392
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +IF + + SWN+++ + Q G L F M S G +PD T
Sbjct: 393 MYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFT 452
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+V+PA + L+ H + IHG I+ + L KN +F+ AL+DMY+KCG++ A
Sbjct: 453 MVSVIPALAELSVTRHAKWIHGLIIRSCLDKN--------IFVTTALVDMYSKCGAIHMA 504
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F +S + V +WN MI GYG G G+ ALD+F M + ++P+++T++ V+SACSHS
Sbjct: 505 RKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G M+ YG+ P+++HY ++D+LGRAG++ EA++ MP V+
Sbjct: 565 GLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGA 624
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
A ++H N ++ E AA+++F+L P G +VL++NIY + K+ +V ++R TM ++ +
Sbjct: 625 XXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGL 684
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCS +EL++ +H+F S +HP++K IYA L L ++ G
Sbjct: 685 KKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAG 730
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 251/505 (49%), Gaps = 19/505 (3%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
+ + HP + L+LC T++++ +I +++ G+ + L T L++++SK
Sbjct: 45 SHVYKHPAAVL-----LELC---TSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGS 96
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ A VF + + + Y+ M+ G+ N L F MR V P Y F L+K
Sbjct: 97 INEAARVFEPIDDKLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLK 155
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C D + K+IHG + +V+ + +VN Y KC+ +++A K+F+ +P RD+V
Sbjct: 156 VCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVS 215
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN ++ G++Q G KALE+ RM EG T+ VL A +G G+ +HG +
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ G+ V + AL DMY K V A IF+ M++K + SWNS+M + Q G + +
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F++ML G P VT L AC+ L L G+ +H ++ L D+ +
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG--------SDISVM 387
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+L+ MY+KC + A +F ++ + SWN MILGY +G+ EAL+ FS M +K
Sbjct: 388 NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMK 447
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD T V V+ A + + L+ R + I T ++DM + G ++ A +
Sbjct: 448 PDSFTMVSVIPALAELSVTRHAKWIHGLI-IRSCLDKNIFVTTALVDMYSKCGAIHMARK 506
Query: 503 LALAMPNEANPVVWRTLLAASRLHG 527
L M ++ + + W ++ HG
Sbjct: 507 L-FDMISDRHVITWNAMIDGYGTHG 530
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 339/591 (57%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L + L+ G+ +HS +L G T+L+ MY+KC K VF L
Sbjct: 229 TYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKL 288
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ +N MI G + + + +N M++ GV+P+K T+ L+ C + A+
Sbjct: 289 -VNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWG 347
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH V K G D+ + +AL++ Y +C +++A VF+++ +DV+ W AM+ G A+
Sbjct: 348 KEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKS 407
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +AL V++ M + G+ +R T T +L+A + GR +H VV+ G + V
Sbjct: 408 GFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVG 467
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N L++MY V +A ++F+ M ++DI ++N+++ + L+LFDR+ G +
Sbjct: 468 NTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLK 527
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD VT+ +L AC++ +L R+IH + G D + NAL+ Y KCG
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREIHTLVRKGGF--------FSDTSVGNALVSTYAKCG 579
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S DA +VF KM+K++V SWN +I G G+G++AL +F M +KPD VTFV +LS
Sbjct: 580 SFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLS 639
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH+G L +GR + M + ++PTIEHY C++D+LGRAGQL+EA L MP +AN
Sbjct: 640 ACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANT 699
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL A R+HGN +AE AA+ +L+ + YV +S++Y A G ++ +R M
Sbjct: 700 RIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLM 759
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
Q+ V K PG SWI++ D LH F++ DRSHP+++ IYAEL LT ++ G
Sbjct: 760 EQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMKG 810
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 263/494 (53%), Gaps = 11/494 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C L+ G+EIH ++ G++ ++NMY+KC ++ A VF+ +
Sbjct: 128 TIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKM 187
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++ I G+ + + F M Q GV+P++ T+ ++ A+
Sbjct: 188 E-KKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + G + D +G+ALV Y KC ++ +VFE+L RD++ WN M+ G A+
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + +A EV+ +M +EG+ ++ T +L+A + G+ +H V K G+ S + V
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI MY + + +A +F+ M KD+ SW +++ + G L ++ M AG +
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ VT++++L ACS AAL GR+IH +V GLA D + N L++MY+ CG
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLAT--------DAHVGNTLVNMYSMCG 478
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S++DA+ VF +M ++D+ ++N MI GY GKEAL +F + E LKPD+VT++ +L+
Sbjct: 479 SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 538
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC++SG L RE L+ + G ++ + G ++A + + N
Sbjct: 539 ACANSGSLEWAREIHTLVR-KGGFFSDTSVGNALVSTYAKCGSFSDA-SIVFEKMTKRNV 596
Query: 514 VVWRTLLAASRLHG 527
+ W ++ S HG
Sbjct: 597 ISWNAIIGGSAQHG 610
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 233/430 (54%), Gaps = 9/430 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEP 97
L+ C +L G+++H ++++ + ++ +LINMY +C ++ A V+ LS E
Sbjct: 30 LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMER 89
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++NAM+ G+ + K L M+Q G+ PD+ T + C A+ ++IH
Sbjct: 90 TVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIH 149
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ GL DV + + ++N Y KC +EEA +VF+++ + VV W + GYA G
Sbjct: 150 FQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSE 209
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A E+F++M +EG+ +R T VL+A K G+ VH ++ G++S V AL+
Sbjct: 210 TAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALV 269
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + ++FE + +D+ +WN+++ + G + ++++M G P+ +
Sbjct: 270 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKI 329
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ +L AC + AAL G++IH + G D+ + NAL+ MY++CGS++D
Sbjct: 330 TYVILLNACVNSAALHWGKEIHSRVAKAGFT--------SDIGVQNALISMYSRCGSIKD 381
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF KM +KDV SW MI G G G EAL ++ M +A ++P+ VT+ +L+ACS
Sbjct: 382 ARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSS 441
Query: 458 SGFLSQGREF 467
L GR
Sbjct: 442 PAALEWGRRI 451
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 202/385 (52%), Gaps = 11/385 (2%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+D +++Q G + + ++K C +V ++ +++H + + D Y +AL+N
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 178 TYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
Y++C +EEA +V+++L R V WNAMV GY Q G KAL++ R+M + G+ R
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ LS+ G + GR +H ++ G V V N +++MY K + EA E+F+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
ME+K + SW + + CG + +F +M G P+ +T+ +VL A S AAL G
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+ +H I+ G D + AL+ MY KCGS +D + VF K+ +D+ +WN
Sbjct: 247 KAVHSRILNAGHE--------SDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 298
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
MI G G +EA ++++ M + P+++T+V +L+AC +S L G+E + ++
Sbjct: 299 MIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRV-AKA 357
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEA 500
G I +I M R G + +A
Sbjct: 358 GFTSDIGVQNALISMYSRCGSIKDA 382
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 100/188 (53%), Gaps = 11/188 (5%)
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
DG + + + G Q + + +L C + L+ GRQ+H +I+ + + +
Sbjct: 5 DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQH--------RTVP 56
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMS--KKDVASWNIMILGYGMDGQGKEALDMFSC 435
D + NAL++MY +CGS+ +A+ V+ K+S ++ V SWN M++GY G ++AL +
Sbjct: 57 DQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQ 116
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + L PD T + LS+C G L GRE + + G++ ++ C+++M + G
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGRE-IHFQAMQAGLLFDVKVANCILNMYAKCG 175
Query: 496 QLNEAYEL 503
+ EA E+
Sbjct: 176 SIEEAREV 183
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/603 (37%), Positives = 347/603 (57%), Gaps = 23/603 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM------KYALFV 89
+++LQ C L+ +IH+ +++T + SP + ++ S C +YAL +
Sbjct: 26 LSTLQTCKSIKGLK---QIHASIIKT--MPSPDAQLTISTRLSALCAQSLPIDPRYALSL 80
Query: 90 FNNLSCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
L PN+ YNA+I G SN+ + +GL + M G++PD YT P ++K C +
Sbjct: 81 LAQLRT-PNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 139
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
AV E +++HG K+GL DVY+ + L+ Y C + A KVF+ P RD+V W M+
Sbjct: 140 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 199
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYD 267
GY ++G + + +F M E + T+ VLS+ +G + GR +H +++ +
Sbjct: 200 GYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVN 259
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V NAL+DMY K A ++F+ M K++ SWNS+++ Q G +L +F +M
Sbjct: 260 LDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKM 319
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +PD VT VL +C++L L G+ +H Y+ N + +G F+ NAL+D
Sbjct: 320 QRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADG--------FIGNALVD 371
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS+ A VF M++KDV S+ MI+G M GQG +ALD+FS M + ++PDEVT
Sbjct: 372 MYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVT 431
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVL+ACSH G + +GR++ M + Y + P +EHY C++D+LGRAG +NEA E M
Sbjct: 432 FVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNM 491
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E + V LL A ++HG +L E +++ ++EP G YVLMSNIY + ++ + L
Sbjct: 492 PIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDAL 551
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+R TM+++N+ K PGCS IEL +H F D+SHP+ K IY L + + L+ + +C
Sbjct: 552 KLRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNN-ECL 610
Query: 628 AGT 630
T
Sbjct: 611 TRT 613
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/619 (34%), Positives = 340/619 (54%), Gaps = 38/619 (6%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C LQ + + + +++H+ +LRT + SP +++++++YS + +L +FN+L
Sbjct: 8 CKTLLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNSLP 66
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
P + ++I + S+ L FF M G PD FP ++K C + + +
Sbjct: 67 SPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGE 126
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA-------------------------- 188
+HG + +LG+ D+Y +AL+N Y K +EE
Sbjct: 127 SVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL 186
Query: 189 ---LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
KVFE +P RD+V WN +++G AQ G AL + R M + FT++ VL
Sbjct: 187 GSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIF 246
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
G+ +HG ++ GYD+ V + ++LIDMY K V ++ +F M+ + D SWN
Sbjct: 247 AEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWN 306
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
SI+ Q G D L+ F +ML A +P+ V+FS+++PAC+HL L G+Q+HGYI+ +
Sbjct: 307 SIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS 366
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
N VF+ +AL+DMY KCG++R A+ +F KM D+ SW MI+GY + G
Sbjct: 367 RFDGN--------VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 418
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+A+ +F M +KP+ V F+ VL+ACSH+G + + ++ M Y ++P +EHY
Sbjct: 419 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 478
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
V D+LGR G+L EAYE M E VW TLLAA R+H N +LAE ++++F ++P
Sbjct: 479 AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQ 538
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+ G YVL+SNIY A G++++ +R MR + ++K P CSWIE+K+ +H F++ D+SHP
Sbjct: 539 NIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPY 598
Query: 606 AKSIYAELHSLTARLREHG 624
I L L ++ G
Sbjct: 599 YDRINEALKVLLEQMEREG 617
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 173/391 (44%), Gaps = 55/391 (14%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L + A NL KG+EIH Y +R G +SLI+MY+KC ++ + V
Sbjct: 237 FTLSSV---LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV 293
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L + ++N++I+G N +GL FF M + P+ +F ++ C +
Sbjct: 294 FYMLPQHDGI-SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT 352
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + D +V+I SALV+ Y KC + A +F+++ L D+V W AM+ G
Sbjct: 353 LHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMG 412
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
YA G + A+ +F+RM EG+ + VL+A G + + +
Sbjct: 413 YALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIP 472
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
G+ A+ D+ G+ VG E +E + + I
Sbjct: 473 GLEHYAAVADLLGR---VGRLEEAYEFISDMHI--------------------------- 502
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI-VVNGLAKNGSCKDIDDVFMNNALMD 387
+P +ST+L AC ++H I + ++K D ++ L +
Sbjct: 503 ----EPTGSVWSTLLAAC----------RVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 548
Query: 388 MYTKCGSMRDAQ-----MVFTKMSKKDVASW 413
+Y+ G +DA+ M M KK SW
Sbjct: 549 IYSAAGRWKDARKLRIAMRDKGMKKKPACSW 579
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 340/589 (57%), Gaps = 10/589 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ L+ C H L++G+++H+ M G T++++MY+KC M+ AL VF+ L
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD-LVK 374
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NV ++ AMI+GF + + FFN M + G+ P++ TF ++ C A+ ++
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I + + G D + +AL++ Y KC +++A +VFE++ ++VV WNAM+ Y Q +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ AL F+ + KEGI + T T +L+ + G+ VH +++K G +S + V NA
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+ M+ + A +F M ++D+ SWN+I+ Q G + F M +G +PD
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPD 614
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+TF+ +L AC+ AL GR++H I C DV + L+ MYTKCGS+
Sbjct: 615 KITFTGLLNACASPEALTEGRRLHALITEAAF----DC----DVLVGTGLISMYTKCGSI 666
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA VF K+ KK+V SW MI GY G+GKEAL++F M + +KPD +TFVG LSAC
Sbjct: 667 EDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC 726
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+H+G + +G M+ + + P +EHY C++D+ GRAG LNEA E + M E + V
Sbjct: 727 AHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV 785
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL A ++H N +LAE AAQ+ +L+P G +V++SNIY A G ++EV +R M
Sbjct: 786 WGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLD 845
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PG SWIE+ +HTF S D++HP+ + I+AEL L +R+ G
Sbjct: 846 RGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 280/531 (52%), Gaps = 16/531 (3%)
Query: 2 LSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
LSK + N SS Q + ++ A LQLC NL G+ I++++ ++
Sbjct: 85 LSKAGQFNEAMQVLERVDSSHIQIYRQTYS-----ALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
G+ +LINMY+KC A +F+++ E +V+++N ++ G+ + +
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR-EKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
M Q V PDK TF ++ C D V + ++++ L+ K G D D+++G+AL+N ++K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
C + +A KVF+ LP RD+V W +M+ G A+ G F +A +F+RM +EG+ + +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L A + G+ VH + ++G+D+ + V A++ MY K + +ALE+F++++ +++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SW +++ Q G D F++M+ +G +P+ VTF ++L ACS +AL G+QI +
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
I+ G + + AL+ MY KCGS++DA VF K+SK++V +WN MI Y
Sbjct: 439 IIEAGYGSDDRVR--------TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
Q AL F + + +KP+ TF +L+ C S L G+ ++ + + G+ +
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDL 549
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M G L A L MP + V W T++A HG +A
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVA 599
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 10/336 (2%)
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
++D NA++N ++ G+F++A++V R+ I + R T + +L I +G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
++ + K G + + N LI+MY K A +IF+ M EKD++SWN ++ + Q G
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
++ +L ++M+ +PD TF ++L AC+ + GR+++ I+ G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT------- 244
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+F+ AL++M+ KCG + DA VF + +D+ +W MI G G+ K+A ++F M
Sbjct: 245 -DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRM 303
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E ++PD+V FV +L AC+H L QG++ M+ G I T ++ M + G
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE-VGWDTEIYVGTAILSMYTKCGS 362
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ +A E+ + N V W ++A HG D A
Sbjct: 363 MEDALEV-FDLVKGRNVVSWTAMIAGFAQHGRIDEA 397
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/621 (36%), Positives = 344/621 (55%), Gaps = 53/621 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQM 83
NHP SL L + LQ + IH+ M++TG+ ++ +++ LI + +
Sbjct: 2 NHP--------SLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGL 53
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA+ VF + EPN+ +N M G + L + M LG+LP+ YTFP L+K
Sbjct: 54 PYAISVFETIQ-EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 112
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE---------- 193
C A E ++IHG V KLG DLD+Y+ ++L++ Y++ +E+A KVF+
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 172
Query: 194 ---------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
E+P++DVV WNAM++GYA+ G +ALE+F+ M K +
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 232
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ V+SA + GR VH + G+ S + ++NALID+Y K V A +
Sbjct: 233 PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGL 292
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
FE + KD+ SWN+++ + + L LF ML +G P+ VT ++LPAC+HL A+
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAI 352
Query: 353 MHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
GR IH YI + G+A S + +L+DMY KCG + AQ VF + + +
Sbjct: 353 EIGRWIHVYINKRLKGVANASSHR--------TSLIDMYAKCGDIEAAQQVFDSILNRSL 404
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+SWN MI G+ M G+ A D+FS M + +++PD++TFVG+LSACSHSG L GR
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M+ Y + P +EHY C+ID+LG +G EA E+ M E + V+W +LL A +++ N +
Sbjct: 465 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVE 524
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AQ + ++EP + G+YVL+SNIY G++ EV IR + + ++K PGCS IE+
Sbjct: 525 LGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEID 584
Query: 591 DGLHTFISSDRSHPEAKSIYA 611
+H FI D+ HP + IY
Sbjct: 585 SVVHEFIIGDKFHPRNREIYG 605
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 340/589 (57%), Gaps = 10/589 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ L+ C H L++G+++H+ M G T++++MY+KC M+ AL VF+ L
Sbjct: 316 VSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFD-LVK 374
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NV ++ AMI+GF + + FFN M + G+ P++ TF ++ C A+ ++
Sbjct: 375 GRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQ 434
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I + + G D + +AL++ Y KC +++A +VFE++ ++VV WNAM+ Y Q +
Sbjct: 435 IQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQ 494
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ AL F+ + KEGI + T T +L+ + G+ VH +++K G +S + V NA
Sbjct: 495 YDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNA 554
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+ M+ + A +F M ++D+ SWN+I+ Q G + F M +G +PD
Sbjct: 555 LVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPD 614
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+TF+ +L AC+ AL GR++H I C DV + L+ MYTKCGS+
Sbjct: 615 KITFTGLLNACASPEALTEGRRLHALITEAAF----DC----DVLVGTGLISMYTKCGSI 666
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA VF K+ KK+V SW MI GY G+GKEAL++F M + +KPD +TFVG LSAC
Sbjct: 667 EDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSAC 726
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+H+G + +G M+ + + P +EHY C++D+ GRAG LNEA E + M E + V
Sbjct: 727 AHAGLIEEGLHHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRV 785
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL A ++H N +LAE AAQ+ +L+P G +V++SNIY A G ++EV +R M
Sbjct: 786 WGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLD 845
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PG SWIE+ +HTF S D++HP+ + I+AEL L +R+ G
Sbjct: 846 RGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLG 894
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 161/531 (30%), Positives = 280/531 (52%), Gaps = 16/531 (3%)
Query: 2 LSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
LSK + N SS Q + ++ A LQLC NL G+ I++++ ++
Sbjct: 85 LSKAGQFNEAMQVLERVDSSHIQIYRQTYS-----ALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
G+ +LINMY+KC A +F+++ E +V+++N ++ G+ + +
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMR-EKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
M Q V PDK TF ++ C D V + ++++ L+ K G D D+++G+AL+N ++K
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
C + +A KVF+ LP RD+V W +M+ G A+ G F +A +F+RM +EG+ + +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L A + G+ VH + ++G+D+ + V A++ MY K + +ALE+F++++ +++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SW +++ Q G D F++M+ +G +P+ VTF ++L ACS +AL G+QI +
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
I+ G + + AL+ MY KCGS++DA VF K+SK++V +WN MI Y
Sbjct: 439 IIEAGYGSDDRVR--------TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYV 490
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
Q AL F + + +KP+ TF +L+ C S L G+ ++ + + G+ +
Sbjct: 491 QHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGK-WVHFLIMKAGLESDL 549
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M G L A L MP + V W T++A HG +A
Sbjct: 550 HVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQHGKNQVA 599
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 10/336 (2%)
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
++D NA++N ++ G+F++A++V R+ I + R T + +L I +G
Sbjct: 72 IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
++ + K G + + N LI+MY K A +IF+ M EKD++SWN ++ + Q G
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
++ +L ++M+ +PD TF ++L AC+ + GR+++ I+ G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT------- 244
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+F+ AL++M+ KCG + DA VF + +D+ +W MI G G+ K+A ++F M
Sbjct: 245 -DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRM 303
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E ++PD+V FV +L AC+H L QG++ M+ G I T ++ M + G
Sbjct: 304 EEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE-VGWDTEIYVGTAILSMYTKCGS 362
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ +A E+ + N V W ++A HG D A
Sbjct: 363 MEDALEV-FDLVKGRNVVSWTAMIAGFAQHGRIDEA 397
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/600 (36%), Positives = 337/600 (56%), Gaps = 45/600 (7%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNA 104
LQ + IH+ M++TG+ ++ +++ LI + + YA+ VF + EPN+ +N
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQ-EPNLLIWNT 61
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
M G + L + M LG+LP+ YTFP L+K C A E ++IHG V KLG
Sbjct: 62 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLG 121
Query: 165 LDLDVYIGSALVNTYLKCQ-------------------------------FMEEALKVFE 193
DLD+Y+ ++L++ Y++ ++E A K+F+
Sbjct: 122 CDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFD 181
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P++DVV WNAM++GYA+ G + +ALE+F+ M K + T+ V+SA G +
Sbjct: 182 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 241
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
GR VH + G+ S + ++NALID+Y K + A +FE + KD+ SWN+++ +
Sbjct: 242 GRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTH 301
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNG 371
+ L LF ML +G P+ VT ++LPAC+HL A+ GR IH YI + G+A
Sbjct: 302 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANAS 361
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
S + +L+DMY KCG + A VF + K ++SWN MI G+ M G+ + D
Sbjct: 362 S--------LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 413
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+FS M + ++PD++TFVG+LSACSHSG L GR M Y + P +EHY C+ID+L
Sbjct: 414 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLL 473
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
G +G EA E+ M E + V+W +LL A ++HGN +L E AQ + ++EP + G+YV
Sbjct: 474 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYV 533
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L+SNIY G++ EV + R + + ++K PGCS IE+ +H FI D+ HP + IY
Sbjct: 534 LLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 593
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 121/477 (25%), Positives = 208/477 (43%), Gaps = 82/477 (17%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG--------------------- 62
++ PF L +C A ++GQ+IH ++L+ G
Sbjct: 90 NSYTFPFLLKSC-------AKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 142
Query: 63 ------IIDSP----LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+SP +S T+LI Y+ ++ A +F+ + + +V ++NAMISG+
Sbjct: 143 EDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK-DVVSWNAMISGYAET 201
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L+ F M + V PD+ T ++ C ++ +++H + G ++ I
Sbjct: 202 GNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIV 261
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL++ Y KC +E A +FE LP +DV+ WN ++ GY + + +AL +F+ M + G
Sbjct: 262 NALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 321
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEAL 290
+ T+ +L A +G GR +H + K G + + +LIDMY K + A
Sbjct: 322 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAH 381
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F + K + SWN+++ G D + +F RM G +PD +TF +L ACSH
Sbjct: 382 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSG 441
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L GR I + + KM+ K +
Sbjct: 442 MLDLGRHIFRSMTQD-------------------------------------YKMTPK-L 463
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ MI G G KEA +M + M +++PD V + +L AC G + G F
Sbjct: 464 EHYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESF 517
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 334/591 (56%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +LQKG+++HSY+L+ G+ ++ SL+++Y KC ++ A +FN L
Sbjct: 247 TVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN-L 305
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV +N M+ + K + F M+ G+ P+++T+PC+++ C +
Sbjct: 306 GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELG 365
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH L K G + D+Y+ L++ Y K +++A K+ E L RDVV W +M+ GY Q
Sbjct: 366 EQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQH 425
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+AL F+ M G+W + SA + + G +H V GY + + +
Sbjct: 426 DFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIW 485
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N L+++Y + EA +F +E KD +WN +++ Q + L +F +M AG +
Sbjct: 486 NTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAK 545
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
++ TF + + A ++LA + G+Q+HG V G + + NAL+ +Y KCG
Sbjct: 546 YNVFTFISAISALANLADIKQGKQVHGRAVKTG--------HTSETEVANALISLYGKCG 597
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA+M+F++MS ++ SWN +I G+G EALD+F M + LKP++VTF+GVL+
Sbjct: 598 SIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLA 657
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G + M + YG+ P +HY CV+D+LGRAGQL+ A MP AN
Sbjct: 658 ACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANA 717
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++WRTLL+A ++H N ++ E+AA+ + +LEP +YVL+SN Y GK+ +R M
Sbjct: 718 MIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMM 777
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + +RK PG SWIE+K+ +H F DR HP + IY L L RL + G
Sbjct: 778 KDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIG 828
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 246/501 (49%), Gaps = 16/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ +++ C +G+ IH+ + + +LI +Y K A
Sbjct: 144 PYVLSSVLSA---CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAER 200
Query: 89 VF-NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + L C+ T+N +ISG L F+ M+ G+ PD T L+ C V
Sbjct: 201 VFCDMLFCDR--VTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASV 258
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + K++H + K G+ D +L++ Y+KC +E A +F +VVLWN M+
Sbjct: 259 GDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLML 318
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Y QI + K+ E+F +M GI ++FT +L G + G +H + +K G++
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V LIDMY K C+ +A +I EM+E++D+ SW S++ + Q + L F M
Sbjct: 379 SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEM 438
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD + ++ AC+ + A+ G QIH + V+G A D+ + N L++
Sbjct: 439 QDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAA--------DISIWNTLVN 490
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y +CG +A +F ++ KD +WN +I G+G K+AL +F M +A K + T
Sbjct: 491 LYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFT 550
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ +SA ++ + QG++ + + G E +I + G+ G + +A ++ +
Sbjct: 551 FISAISALANLADIKQGKQ-VHGRAVKTGHTSETEVANALISLYGKCGSIEDA-KMIFSE 608
Query: 508 PNEANPVVWRTLLAASRLHGN 528
+ N V W T++ + HG
Sbjct: 609 MSLRNEVSWNTIITSCSQHGR 629
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 226/479 (47%), Gaps = 18/479 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ L LI++Y+K + A VF LS +V ++ AM+SG+ +
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHV-SWVAMLSGYAQS 122
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ ++ M V+P Y ++ C + + IH V+K + ++G
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+ YL + A +VF ++ D V +N +++G+AQ G AL++F M G+
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
TV +L+A +G + G+ +H ++K G +L+D+Y K + A +I
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + + ++ WN ++ + Q + + +F +M + G P+ T+ +L C+ +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH + NG D++++ L+DMY+K G + A+ + + K+DV S
Sbjct: 363 ELGEQIHSLSIKNGFE--------SDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVS 414
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY +EAL F M + + PD + SAC+ + QG L +
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG---LQIHA 471
Query: 473 SRY--GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA---SRLH 526
Y G I + ++++ R G+ EA+ L + ++ + + W L++ SRL+
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISGFGQSRLY 529
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 193/374 (51%), Gaps = 10/374 (2%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V +IH GL D IG+ L++ Y K + +A +VF+EL RD V W AM++GYAQ
Sbjct: 62 VLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQ 121
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +A ++ +M + + + ++ VLSA F GR++H V K + S V
Sbjct: 122 SGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFV 181
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALI +Y A +F M D ++N++++ H QCG+ + L++FD M +G
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD VT +++L AC+ + L G+Q+H Y++ G++ D +L+D+Y KC
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSF--------DYITEGSLLDLYVKC 293
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A +F + +V WN+M++ YG ++ ++F M + P++ T+ +L
Sbjct: 294 GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCIL 353
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
C+ +G + G + L + G + +IDM + G L++A ++ L M + +
Sbjct: 354 RTCTCTGQIELGEQIHSL-SIKNGFESDMYVSGVLIDMYSKYGCLDKARKI-LEMLEKRD 411
Query: 513 PVVWRTLLAASRLH 526
V W +++A H
Sbjct: 412 VVSWTSMIAGYVQH 425
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/594 (37%), Positives = 335/594 (56%), Gaps = 45/594 (7%)
Query: 54 IHSYMLRTGIIDSPLSITSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
IH+ M++TG+ ++ +++ LI + + YA+ VF + EPN+ +N M G
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ-EPNLLIWNTMFRGHA 64
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L + M LG+LP+ YTFP L+K C A E ++IHG V KLG DLD+Y
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 171 IGSALVNTYLKCQFMEEALKVFE-------------------------------ELPLRD 199
+ ++L++ Y++ +E+A KVF+ E+P++D
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKD 184
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV WNAM++GYA+ G +ALE+F+ M K + T+ V+SA + GR VH
Sbjct: 185 VVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHS 244
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ G+ S + ++NALID+Y K V A +FE + KD+ SWN+++ + +
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCKDID 377
L LF ML +G P+ VT ++LPAC+HL A+ GR IH YI + G+A S +
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR--- 361
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+L+DMY KCG + AQ VF + + ++SWN MI G+ M G+ A D+FS M
Sbjct: 362 -----TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMR 416
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ +++PD++TFVG+LSACSHSG L GR M+ Y + P +EHY C+ID+LG +G
Sbjct: 417 KNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLF 476
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E+ M E + V+W +LL A ++HGN +L E AQ + ++EP + G+YVL+SNIY
Sbjct: 477 KEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIY 536
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
G++ EV IR + + ++K PGCS IE+ +H FI D+ HP + IY
Sbjct: 537 ATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 590
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 215/498 (43%), Gaps = 77/498 (15%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ CA ++GQ+IH ++L+ G TSLI+MY + +++ A VF+ S
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 97 ----------------------------PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+V ++NAMISG+ + L+ F M +
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
V PD+ T ++ C ++ +++H + G ++ I +AL++ Y+KC +E A
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+FE L +DV+ WN ++ GY + + +AL +F+ M + G + T+ +L A +
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334
Query: 249 GFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G + GR +H + K G + +LIDMY K + A ++F+ + + + SWN+
Sbjct: 335 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 394
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ G + +F RM +PD +TF +L ACSH L GR I
Sbjct: 395 MIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF------- 447
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
SM++ + K+ + MI G G
Sbjct: 448 --------------------------RSMKEDYKITPKLEH-----YGCMIDLLGHSGLF 476
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE-HYT 485
KEA +M + M +++PD V + +L AC G + G + ++ + P Y
Sbjct: 477 KEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESY---AQNLIKIEPKNPGSYV 530
Query: 486 CVIDMLGRAGQLNEAYEL 503
+ ++ AG+ NE ++
Sbjct: 531 LLSNIYATAGRWNEVAKI 548
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 11/291 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T ++ + CA +++ G+++HS++ G + + +LI++Y KC +++ A +F
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEG 280
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS + +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 281 LSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI 339
Query: 153 VKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IH + K G+ ++L++ Y KC +E A +VF+ + R + WNAM+ G+
Sbjct: 340 GRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGF 399
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A G + A ++F RM K I T G+LSA G GR I M D +
Sbjct: 400 AMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR---HIFRSMKEDYKI 456
Query: 271 -PVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
P + +ID+ G EA E+ ME E D W S++ + GN
Sbjct: 457 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGN 507
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/578 (36%), Positives = 338/578 (58%), Gaps = 11/578 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
L+ G+ +HS++L G +S L++ T+L+ MY+KC K VF L ++ +N MI
Sbjct: 361 LKWGKTVHSHILNAGH-ESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMI 418
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
G + + ++ M++ G++P+K T+ L+ C + A+ ++IH V K G
Sbjct: 419 GGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D+ + +AL++ Y +C +++A +F ++ +D++ W AM+ G A+ G +AL VF+ M
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G+ +R T T +L+A GR +H V++ G + V N L++MY V
Sbjct: 539 QQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSV 598
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A ++F+ M ++DI ++N+++ + L+LFDR+ G +PD VT+ +L AC
Sbjct: 599 KDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNAC 658
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
++ +L ++IH ++ +G + D + NAL+ Y KCGS DA +VF KM
Sbjct: 659 ANSGSLEWAKEIHSLVLKDGY--------LSDTSLGNALVSTYAKCGSFSDALLVFDKMM 710
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
K++V SWN +I G G+G++ L +F M +KPD VTFV +LSACSH+G L +GR
Sbjct: 711 KRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRR 770
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ M +G+ PTIEHY C++D+LGRAGQL+E L MP +AN +W LL A R+H
Sbjct: 771 YFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIH 830
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN +AE AA+ +L+P + YV +S++Y A G ++ +R M Q+ V K PG SW
Sbjct: 831 GNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSW 890
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ D LH F++ DRSHPE++ IYAEL LT ++ G
Sbjct: 891 IEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEG 928
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/510 (30%), Positives = 269/510 (52%), Gaps = 18/510 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L C + L+ G+EIH ++ ++ ++NMY+KC + A VF+
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + +V ++ +I G+ + + F M+Q GV+P++ T+ ++ A+
Sbjct: 305 METK-SVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKW 363
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +H + G + D+ +G+ALV Y KC ++ +VFE+L RD++ WN M+ G A+
Sbjct: 364 GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 423
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + +A E++ +M +EG+ ++ T +L+A + GR +H VVK G+ + V
Sbjct: 424 GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISV 483
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALI MY + + +A +F M KDI SW +++ + G L +F M AG
Sbjct: 484 QNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGL 543
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ VT++++L ACS AAL GR+IH ++ GLA D + N L++MY+ C
Sbjct: 544 KPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLAT--------DAHVANTLVNMYSMC 595
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS++DA+ VF +M+++D+ ++N MI GY GKEAL +F + E LKPD+VT++ +L
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
+AC++SG L +E L+ + G + ++ + G ++A L + N
Sbjct: 656 NACANSGSLEWAKEIHSLV-LKDGYLSDTSLGNALVSTYAKCGSFSDAL-LVFDKMMKRN 713
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ W ++ HG Q V QL
Sbjct: 714 VISWNAIIGGCAQHGR-------GQDVLQL 736
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 234/430 (54%), Gaps = 9/430 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEP 97
L+ C +L G+E+H ++++ + ++ +LINMY +C ++ A V+N L+ E
Sbjct: 148 LKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTER 207
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++NAM+ G+ + + L M+Q G+ + T L+ C A+ ++IH
Sbjct: 208 TVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIH 267
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K L DV + + ++N Y KC + EA +VF+++ + VV W ++ GYA G
Sbjct: 268 VEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSE 327
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A E+F++M +EG+ +R T VL+A K G+ VH ++ G++S + V AL+
Sbjct: 328 IAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALV 387
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + ++FE + +D+ +WN+++ + GN + ++ +M G P+ +
Sbjct: 388 KMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ +L AC + AL GR+IH +V +G + D+ + NAL+ MY +CGS++D
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGF--------MFDISVQNALISMYARCGSIKD 499
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+++F KM +KD+ SW MI G G G EAL +F M +A LKP+ VT+ +L+ACS
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 458 SGFLSQGREF 467
L GR
Sbjct: 560 PAALDWGRRI 569
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 201/386 (52%), Gaps = 11/386 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ +D +++Q G + + ++K C +V ++ +++H + + LD Y +AL+
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 177 NTYLKCQFMEEALKVFEEL--PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
N Y++C +EEA +V+ +L R V WNAMV GY Q G +AL++ R M + G+ +
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R T +LS+ + GR +H +K V V N +++MY K + EA E+F+
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
ME K + SW I+ + CG+ + +F +M G P+ +T+ VL A S AAL
Sbjct: 304 KMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKW 363
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+ +H +I+ G D+ + AL+ MY KCGS +D + VF K+ +D+ +WN
Sbjct: 364 GKTVHSHILNAGHE--------SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWN 415
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G G +EA +++ M + P+++T+V +L+AC + L GRE + +
Sbjct: 416 TMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRV-VK 474
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEA 500
G + I +I M R G + +A
Sbjct: 475 DGFMFDISVQNALISMYARCGSIKDA 500
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 319/561 (56%), Gaps = 43/561 (7%)
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
ID L+I L+ YS + A ++F+ S E NV +N MI + +N+ + L F
Sbjct: 69 IDPTLAI-KLMRAYSAQGETSVARYIFDR-SLEKNVVFFNVMIRSYVNNNLYVEALSIFQ 126
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
M PD YTFPC++K C + + ++H + K+GLD +++IG+ALV Y KC
Sbjct: 127 VMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCG 186
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ EA KV +++P RDVV WN+MV GYAQ G+F ALE+ + M + T+ LS
Sbjct: 187 CLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LS 245
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
++ +N + +H +FE M +K++ S
Sbjct: 246 PVVCYTSLENVQYIHN--------------------------------MFERMTKKNLIS 273
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN ++ ++ + + LF +M G +PD VT +++LPAC L+AL GR++H YI
Sbjct: 274 WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIE 333
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L N + + NAL+DMY KCG + +A+ VF KM +DV SW M+ YG
Sbjct: 334 KGNLQPN--------LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
GQG +A+ +F+ M ++ PD + FV VLSACSH+G L QGR + +M +YG+VP IEH
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ C++D+ GRAG++ EAY MP E N VW LL+A R+H D+ +AA +FQL
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
P G YVL+SNIY G +++V+++R+ M++ ++K PG S +EL +HTF++ D+ H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 604 PEAKSIYAELHSLTARLREHG 624
P+AK+IY EL L +++E G
Sbjct: 566 PQAKNIYGELDVLVGKMKELG 586
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 38/334 (11%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQM 83
FN C+ L+ C+ NL+ G ++H +++ G+ D+ L I +L+ MY KC +
Sbjct: 132 AFNPDHYTFPCV--LKACSGLDNLRVGLQVHDAIVKVGL-DTNLFIGNALVAMYGKCGCL 188
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A V + + +V ++N+M++G+ + L+ M L + D T L
Sbjct: 189 REARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C ++ V+ IH + FE + ++++ W
Sbjct: 248 VC-YTSLENVQYIHNM--------------------------------FERMTKKNLISW 274
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N M+ Y ++A+ +F +M + G+ T+ +L A + GR +H + K
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ + NAL+DMY K C+ EA ++F+ M +D+ SW S+M+ + + G + L
Sbjct: 335 GNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
F +ML +G PD + F +VL ACSH L GR
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 33 ATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
A IASL C + L G+ +H Y+ + + + L +L++MY+KC ++ A VF+
Sbjct: 306 AVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFD 365
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V ++ +M+S + + + + F M G PD F ++ C +
Sbjct: 366 KMRLR-DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLD 424
Query: 152 EVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
+ + + + G+ + + +V+ + + +EEA +++P+ + +W A+++
Sbjct: 425 QGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 352/649 (54%), Gaps = 55/649 (8%)
Query: 15 FNFSTSSGNQTF----NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
F+F SS + + NHP SL L + LQ + IH+ M++TG+ ++ ++
Sbjct: 17 FHFLPSSSDPPYDSLRNHP--------SLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYAL 68
Query: 71 TSLINMYSKCCQ---MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+ L+ + + YA+ VF + EPN+ +N M G + L + M
Sbjct: 69 SKLLELCVISPHFDGLPYAISVFETIQ-EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
LG+LP+ YTFP L+K C A E ++IHG V KLG DLD+++ ++L++ Y++ +E+
Sbjct: 128 LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLED 187
Query: 188 ALKVFE-------------------------------ELPLRDVVLWNAMVNGYAQIGEF 216
A KVF+ E+P++DVV WNAM++GYA+ G +
Sbjct: 188 ARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F+ M K I T+ V+SA G + GR VH + G+ S + ++N+L
Sbjct: 248 KEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSL 307
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+D+Y K + A +FE + KD+ SWN+++ + + L LF ML +G +P+
Sbjct: 308 MDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPND 367
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVN-GLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT ++LPAC+HL A+ GR IH YI A N S + +L+DMY KCG +
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS-------LRTSLIDMYAKCGDI 420
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A VF + K ++SWN MI G+ M G+ A D+FS M + ++PD++TFVG+LSAC
Sbjct: 421 EAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSAC 480
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S SG L GR M Y + P +EHY C+ID+LG +G EA E+ M E + V+
Sbjct: 481 SRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVI 540
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LL A ++ GN +L E AQ + ++EP + G YVL+SNIY G++ EV IR +
Sbjct: 541 WCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLND 600
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ ++K PGCS IE+ +H FI D+ HP + IY L + L + G
Sbjct: 601 KGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 319/561 (56%), Gaps = 43/561 (7%)
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
ID L+I L+ YS + A ++F+ S E NV +N MI + +N+ + L F
Sbjct: 69 IDPTLAI-KLMRAYSAQGETSVARYIFDR-SLEKNVVFFNVMIRSYVNNNLYVEALSIFQ 126
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
M PD YTFPC++K C + + ++H + K+GLD +++IG+ALV Y KC
Sbjct: 127 VMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCG 186
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ EA KV +++P RDVV WN+MV GYAQ G+F ALE+ + M + T+ LS
Sbjct: 187 CLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LS 245
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
++ +N + +H +FE M +K++ S
Sbjct: 246 PVVCYTSLENVQYIHN--------------------------------MFERMTKKNLIS 273
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN ++ ++ + + LF +M G +PD VT +++LPAC L+AL GR++H YI
Sbjct: 274 WNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIE 333
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L N + + NAL+DMY KCG + +A+ VF KM +DV SW M+ YG
Sbjct: 334 KGNLRPN--------LLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRS 385
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
GQG +A+ +F+ M ++ PD + FV VLSACSH+G L QGR + +M +YG+VP IEH
Sbjct: 386 GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEH 445
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ C++D+ GRAG++ EAY MP E N VW LL+A R+H D+ +AA +FQL
Sbjct: 446 FACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLA 505
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
P G YVL+SNIY G +++V+++R+ M++ ++K PG S +EL +HTF++ D+ H
Sbjct: 506 PKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYH 565
Query: 604 PEAKSIYAELHSLTARLREHG 624
P+AK+IY EL L +++E G
Sbjct: 566 PQAKNIYGELDVLVGKMKELG 586
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 38/334 (11%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQM 83
FN C+ L+ C+ NL+ G ++H +++ G+ D+ L I +L+ MY KC +
Sbjct: 132 AFNPDHYTFPCV--LKACSGLDNLRVGLQVHDAIVKVGL-DTNLFIGNALVAMYGKCGCL 188
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A V + + +V ++N+M++G+ + L+ M L + D T L
Sbjct: 189 REARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C ++ V+ IH + FE + ++++ W
Sbjct: 248 VC-YTSLENVQYIHNM--------------------------------FERMTKKNLISW 274
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N M+ Y ++A+ +F +M + G+ T+ +L A + GR +H + K
Sbjct: 275 NVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEK 334
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ + NAL+DMY K C+ EA ++F+ M +D+ SW S+M+ + + G + L
Sbjct: 335 GNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVAL 394
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
F +ML +G PD + F +VL ACSH L GR
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRH 428
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 33 ATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
A IASL C + L G+ +H Y+ + + + L +L++MY+KC ++ A VF+
Sbjct: 306 AVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFD 365
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V ++ +M+S + + + + F M G PD F ++ C +
Sbjct: 366 KMRLR-DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLD 424
Query: 152 EVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
+ + + + G+ + + +V+ + + +EEA +++P+ + +W A+++
Sbjct: 425 QGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 347/617 (56%), Gaps = 12/617 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ + CA + + G ++H+Y L+T + T+ ++MY+KC +M A VFN
Sbjct: 272 ATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNT 331
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
P ++NA+I G+ D + L+ F +++ + D+ + + C + LE
Sbjct: 332 FP-NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE 390
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++HGL K GLD ++ + + +++ Y KC + EA +F+++ ++D V WNA++ + Q
Sbjct: 391 GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQ 450
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ L +F M + + +T V+ A G VHG V+K G V
Sbjct: 451 NEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFV 510
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+A+IDMY K + EA +I E +EE+ SWNSI++ + L F RML G
Sbjct: 511 GSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGV 570
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD T++TVL C++LA + G+QIHG I+ L DV++ + ++DMY+KC
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQIHGQILKLQLHS--------DVYIASTIVDMYSKC 622
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+M+D++++F K K+D +W+ MI Y G G++A+ +F M +KP+ F+ VL
Sbjct: 623 GNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVL 682
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC+H GF+ +G + M S YG+ P +EHY+C++D+LGR+GQ+NEA EL +MP EA+
Sbjct: 683 RACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEAD 742
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
V+WRTLL RL GN ++AE AA + QL+P YVL+SN+Y G + EV IR
Sbjct: 743 DVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSF 802
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGT 630
M+ ++K PGCSWI+++D +H F+ D++HP ++ IY + H L ++ G G
Sbjct: 803 MKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGF 862
Query: 631 LFDSD-STASGFEKHRL 646
L D + +E H++
Sbjct: 863 LLDEEVDEQDSYEGHKI 879
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/552 (25%), Positives = 255/552 (46%), Gaps = 55/552 (9%)
Query: 6 SRINPFSSCFNFSTSSGNQT----FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
S+ P + + S++ N T F+H F Q C++ + G++ H+ + T
Sbjct: 17 SQTTPPYAIHSISSNQMNPTKKLTFSHIF---------QKCSNLKAINPGKQAHAQITVT 67
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNLS--------------------------- 94
G + + L+ Y KC + YA VF+ +
Sbjct: 68 GFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLF 127
Query: 95 ---CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
E +V ++N+M+S + N F K ++ F MR L + D TF ++K C +
Sbjct: 128 DSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYG 187
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++H L ++G D DV G+ALV+ Y C+ ++ A +F E+P R+ V W+A++ GY
Sbjct: 188 LGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYV 247
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ F + L++++ M EG+ +S+ T + + F+ G +H +K +
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI 307
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V A +DMY K + +A ++F S N+++ + + L +F + +
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
D ++ S L ACS + + G Q+HG V GL N + + N ++DMY K
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFN--------ICVANTILDMYAK 419
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ +A ++F M KD SWN +I + + +E L +F M + ++PD+ TF V
Sbjct: 420 CGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSV 479
Query: 452 LSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+ AC+ L+ G E +++S G+ + + +IDM + G L EA ++ + E
Sbjct: 480 VKACAGKKALNYGMEVHGRVIKSGMGLDWFVG--SAIIDMYCKCGMLVEAEKIHERL-EE 536
Query: 511 ANPVVWRTLLAA 522
V W ++++
Sbjct: 537 RTTVSWNSIISG 548
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 344/627 (54%), Gaps = 45/627 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L+ C + + L+KG++IH+ + G+ T+LI MYSKC ++ A VF+ +
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E NV ++ A+I + + + + M Q G+ P+ TF L+ C A+
Sbjct: 219 T-ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH + + GL+ D+ + +AL+ Y KC ++EA ++F+ + RDV+ W+AM+ GYAQ
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 214 G-----EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G + ++ RM +EG++ ++ T +L A G + GR +H + K+G++
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM- 327
+ A+ +MY K + EA ++F M K++ +W S ++++ +CG+ ++F M
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457
Query: 328 ------------------------------LSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+ GFQPD VT T+L AC LA L G+
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKL 517
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H V GL D + +L+ MY+KCG + +A+ VF KMS +D +WN M+
Sbjct: 518 VHAEAVKLGLE--------SDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAML 569
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GYG G G EA+D+F M + ++ P+E+T V+SACS +G + +GRE +M+ + +
Sbjct: 570 AGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKM 629
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P +HY C++D+LGRAG+L EA E +MP E + VW LL A + H N LAE AA
Sbjct: 630 TPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAH 689
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
+ +LEP + Y+ +SNIY G++++ +R M + ++K+ G S IE+ +HTF+
Sbjct: 690 HILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFV 749
Query: 598 SSDRSHPEAKSIYAELHSLTARLREHG 624
+ D +HPE +I+AEL +LT ++E G
Sbjct: 750 AEDCAHPEIDAIHAELETLTKEMKEAG 776
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 262/519 (50%), Gaps = 33/519 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
++ CA + G+ +H + G+ ID L SLIN YSK + A VF ++
Sbjct: 63 IEHCAKARRFEDGKMVHKQLDELGVEIDIYLG-NSLINFYSKFEDVASAEQVFRRMTLR- 120
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V T+++MI+ + N+ K D F M + P++ TF ++K C + + + +KIH
Sbjct: 121 DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH 180
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+V +G++ DV + +AL+ Y KC + A +VF ++ R+VV W A++ AQ + +
Sbjct: 181 TIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLN 240
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A E++ +M + GI + T +L++ GR +H + + G ++ + V NALI
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-----TLRLFDRMLSAGF 332
MY K V EA EIF+ M ++D+ SW++++ + Q G D +L +RM G
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGV 360
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYI--------------VVNGLAKNGSCKDIDD 378
P+ VTF ++L AC+ AL GRQIH + + N AK GS + +
Sbjct: 361 FPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQ 420
Query: 379 VF--MNN-------ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
VF M N + + MY KCG + A+ VF++M ++V SWN+MI GY +G +
Sbjct: 421 VFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKV 480
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
++ S M +PD VT + +L AC L +G+ + + G+ T +I
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGK-LVHAEAVKLGLESDTVVATSLIG 539
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
M + GQ+ EA + M N + V W +LA HG+
Sbjct: 540 MYSKCGQVAEARTVFDKMSNR-DTVAWNAMLAGYGQHGD 577
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 250/466 (53%), Gaps = 20/466 (4%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + ++Q G+L + T+ C+I+ C + K +H + +LG+++D+Y+G++L+
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y K + + A +VF + LRDVV W++M+ YA KA + F RM+ I +R
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T +L A + GR +H IV MG ++ V V ALI MY K + A E+F M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
E+++ SW +I+ + Q + L+++ML AG P+ VTF ++L +C+ AL GR
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
+IH +I GL D+ + NAL+ MY KC S+++A+ +F +MSK+DV SW+ M
Sbjct: 279 RIHSHISERGLET--------DMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAM 330
Query: 417 ILGYGMDG-QGKEALD----MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
I GY G + KE++D + M + P++VTF+ +L AC+ G L QGR+ +
Sbjct: 331 IAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
S+ G T + +M + G + EA ++ M N+ N V W + L+ G DL
Sbjct: 391 -SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLSMYIKCG--DL 446
Query: 532 AEIAAQRVFQLEPG-HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+ +A++VF P + ++ LM Y G +V ++ +M+ +
Sbjct: 447 S--SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAE 490
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 168/331 (50%), Gaps = 12/331 (3%)
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G +A+++ + + G+ ++ T V+ F++G++VH + ++G + +
Sbjct: 33 KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ N+LI+ Y K + V A ++F M +D+ +W+S++ + + F+RM A
Sbjct: 93 LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ +TF ++L AC++ + L GR+IH + G+ DV + AL+ MY+K
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMET--------DVAVATALITMYSK 204
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + A VF KM++++V SW +I + EA +++ M +A + P+ VTFV +
Sbjct: 205 CGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSL 264
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L++C+ L++GR + R G+ + +I M + + EA E+ M ++
Sbjct: 265 LNSCNTPEALNRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQEAREIFDRM-SKR 322
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ + W ++A G D I VFQL
Sbjct: 323 DVISWSAMIAGYAQSGYKDKESI--DEVFQL 351
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/627 (33%), Positives = 344/627 (54%), Gaps = 45/627 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L+ C + + L+K +EIH+ + +G+ T+LI MYSKC ++ A +F +
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++ A+I + + + + M Q G+ P+ TF L+ C A+
Sbjct: 241 K-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH + + GL+ DV + +AL+ Y KC +++A + F+ + RDV+ W+AM+ GYAQ
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359
Query: 214 G-----EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G + ++ RM +EG++ ++ T +L A + G + GR +H + K+G++S
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ A+ +MY K + EA ++F ME K++ +W S++T++ +CG+ ++F M
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMS 479
Query: 329 S-------------------------------AGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+ GFQPD VT ++L AC L+AL G+
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKL 539
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H V GL D + +L+ MY+KCG + +A+ VF K+S +D +WN M+
Sbjct: 540 VHAEAVKLGLE--------SDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAML 591
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GYG G G EA+D+F M + ++ P+E+TF V+SAC +G + +GRE +M+ + +
Sbjct: 592 AGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRM 651
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P +HY C++D+LGRAG+L EA E MP E + VW LL A + H N LAE AA
Sbjct: 652 KPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAH 711
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
+ +LEP + YV +SNIY G++++ +R M + ++K+ G S IE+ +HTF+
Sbjct: 712 HILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFV 771
Query: 598 SSDRSHPEAKSIYAELHSLTARLREHG 624
+ D +HPE SI+AEL LT ++E G
Sbjct: 772 AEDCAHPEIDSIHAELEMLTKEMKEAG 798
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 288/582 (49%), Gaps = 43/582 (7%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNL 93
CI ++ CA + G+ +H + G+ ID L SLIN YSK + VF +
Sbjct: 83 CI--IEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG-NSLINFYSKFGDVASVEQVFRRM 139
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V T+++MI+ + N+ K D F M+ + P++ TF ++K C + + +
Sbjct: 140 TLR-DVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKA 198
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH +V G++ DV + +AL+ Y KC + A ++F+++ R+VV W A++ AQ
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQH 258
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ ++A E++ +M + GI + T +L++ GR +H + + G ++ V V
Sbjct: 259 RKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVA 318
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-----TLRLFDRML 328
NALI MY K C+ +A E F+ M ++D+ SW++++ + Q G D +L +RM
Sbjct: 319 NALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI--------------VVNGLAKNGSCK 374
G P+ VTF ++L ACS AL GRQIH I + N AK GS
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIY 438
Query: 375 DIDDVF--MNN-------ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
+ + VF M N +L+ MY KCG + A+ VF++MS ++V SWN+MI GY G
Sbjct: 439 EAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+ ++ S M +PD VT + +L AC L +G+ + + G+ T
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGK-LVHAEAVKLGLESDTVVAT 557
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LE 543
+I M + G++ EA + + N + V W +LA HG A +R+ + +
Sbjct: 558 SLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP 616
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR--QQNVRKNPG 583
P N + + + A G+ V + R R Q++ R PG
Sbjct: 617 P----NEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPG 654
Score = 241 bits (616), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 243/464 (52%), Gaps = 20/464 (4%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + ++Q G+L + T+ C+I+ C + + K +H + +LGL +D+Y+G++L+
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y K + +VF + LRDVV W++M+ YA KA + F RM I +R
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRI 180
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T +L A + R +H +V G ++ V V ALI MY K + A EIF+ M
Sbjct: 181 TFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKM 240
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+E+++ SW +I+ + Q + L+++ML AG P+ VTF ++L +C+ AL GR
Sbjct: 241 KERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGR 300
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
+IH +I GL DV + NAL+ MY KC ++DA+ F +MSK+DV SW+ M
Sbjct: 301 RIHSHISERGLET--------DVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAM 352
Query: 417 ILGYGMDG-QGKEALD----MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
I GY G Q KE+LD + M + P++VTF+ +L ACS G L QGR+ +
Sbjct: 353 IAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
S+ G T + +M + G + EA ++ M N+ N V W +LL G+
Sbjct: 413 -SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK-NVVAWASLLTMYIKCGDL-- 468
Query: 532 AEIAAQRVF-QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+A++VF ++ + ++ LM Y G +V ++ +M+
Sbjct: 469 --TSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMK 510
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 164/331 (49%), Gaps = 12/331 (3%)
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G +A+++ + + G+ ++ T ++ + F++G++VH + ++G +
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ N+LI+ Y K V ++F M +D+ +W+S++ + + F+RM A
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ +TF ++L AC++ + L R+IH + +G+ DV + AL+ MY+K
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMET--------DVAVATALITMYSK 226
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + A +F KM +++V SW +I + EA +++ M +A + P+ VTFV +
Sbjct: 227 CGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSL 286
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L++C+ L++GR + R G+ + +I M + + +A E M ++
Sbjct: 287 LNSCNTPEALNRGRRIHSHISER-GLETDVVVANALITMYCKCNCIQDARETFDRM-SKR 344
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ + W ++A G D + VFQL
Sbjct: 345 DVISWSAMIAGYAQSGYQDKESL--DEVFQL 373
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 350/651 (53%), Gaps = 59/651 (9%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCC 81
NQ+ L T + LQLCA ++Q G+ IHS + + +D L + L+ MY C
Sbjct: 92 NQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG-SKLVFMYVTCG 150
Query: 82 QMKYALFVFNNLSCEP-------------------------------------------- 97
++ +F+ ++ E
Sbjct: 151 DLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDE 210
Query: 98 ----NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N+MISG+ SN + KGLD F M LG+ D T ++ C + +L
Sbjct: 211 LGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLG 270
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +HG K ++ + + L++ Y K + A++VFE + R VV W +M+ GYA+
Sbjct: 271 RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE 330
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G ++ +F M KEGI FT+T +L A G +NG+ VH + + S + V
Sbjct: 331 GLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVS 390
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+DMY K +G+A +F M+ KDI SWN+++ + + + L LF M +
Sbjct: 391 NALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSK 449
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ +T + +LPAC+ LAAL G++IHG+I+ NG + D + NAL+DMY KCG
Sbjct: 450 PNSITMACILPACASLAALERGQEIHGHILRNGFSL--------DRHVANALVDMYLKCG 501
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ A+++F + +KD+ SW +MI GYGM G G EA+ F+ M + ++PDEV+F+ +L
Sbjct: 502 ALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILY 561
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG L +G F +M + + P EHY C++D+L RAG L++AY+ MP E +
Sbjct: 562 ACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA 621
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL R++ + LAE A+ VF+LEP + G YVL++NIY K+EEV +R +
Sbjct: 622 TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERI 681
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++ +RKNPGCSWIE+K +H F++ D SHP A I L R++E G
Sbjct: 682 GRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEG 732
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 344/643 (53%), Gaps = 63/643 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ C + + G H + G + +L+ MYS+C ++ A +F+ ++
Sbjct: 162 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 221
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFN------HMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+V ++N+++S + A+ LD F+ H + D + ++ C + AV
Sbjct: 222 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 281
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K++HG + G DV++G+AL++ Y KC ME A+KVF + +DVV WNAMV GY
Sbjct: 282 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 341
Query: 211 AQIGEFHKALEVFRRMSKEGI------WMSRF---------------------------- 236
+Q G F A E+F+ M KE I W +
Sbjct: 342 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401
Query: 237 -TVTGVLSALIMMGFFKNGRVVHGIVVKM----------GYDSGVPVMNALIDMYGKGKC 285
T+ VLSA +G F G +H +K G D + V NALIDMY K +
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461
Query: 286 VGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA--GFQPDLVTFST 341
A IF+ +EE+++ +W ++ H Q G+ + L+LF M+S G P+ T S
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC+HLAA+ G+QIH Y++ + ++ + F+ N L+DMY+KCG + A+ V
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSA------YFVANCLIDMYSKCGDVDTARHV 575
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F MS+K SW M+ GYGM G+G EALD+F M +A PD++TF+ VL ACSH G +
Sbjct: 576 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 635
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
QG + M + YG+ P EHY C ID+L R+G+L++A+ MP E VVW LL+
Sbjct: 636 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 695
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+H N +LAE A ++ ++ + G+Y L+SNIY G++++V IRH M++ ++K
Sbjct: 696 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 755
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSW++ + G +F DRSHP + IYA L SL R++ G
Sbjct: 756 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 798
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 243/515 (47%), Gaps = 56/515 (10%)
Query: 66 SPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
SP S+ T ++ Y C YAL V ++ P V+ +N +I ++
Sbjct: 87 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCR 145
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G PD +T P ++K C ++ + HGL+ G + +V+I +ALV Y +C
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205
Query: 185 MEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMS---KEGIWMSRFTV 238
+EEA +F+E+ R DV+ WN++V+ + + AL++F +M+ E R +
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 265
Query: 239 TGVLSALIMMGFFK---NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
+++ L G K + VHG ++ G V V NALID Y K + A+++F M
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDG-----------------------------------T 320
ME KD+ SWN+++ + Q GN +
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK--NGSCKDIDD 378
L LF +M+ +G P+ VT +VL AC+ L A G +IH Y + N L N + +D
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 379 VFMNNALMDMYTKCGSMRDAQMVF--TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ + NAL+DMY+KC S + A+ +F + +++V +W +MI G+ G +AL +F M
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 505
Query: 437 CEAK--LKPDEVTFVGVLSACSHSGFLSQGREF--LPLMESRYGVVPTIEHYTCVIDMLG 492
+ P+ T +L AC+H + G++ L RY C+IDM
Sbjct: 506 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV-ANCLIDMYS 564
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G ++ A + +M ++ + + W +++ +HG
Sbjct: 565 KCGDVDTARHVFDSM-SQKSAISWTSMMTGYGMHG 598
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 184/416 (44%), Gaps = 62/416 (14%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +V +YL C + AL V E + V WN ++ + + G A+ V RM + G
Sbjct: 91 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
FT+ VL A + ++ G HG++ G++S V + NAL+ MY + + EA
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 291 EIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRML------SAGFQPDLVTFST 341
IF+ + ++ D+ SWNSI++ H + N L LF +M + D+++
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC L A+ +++HG + NG DVF+ NAL+D Y KCG M +A V
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNG--------TFPDVFVGNALIDAYAKCGLMENAVKV 322
Query: 402 FTKMSKKDVASWNIMILGYGMDGQ-----------------------------------G 426
F M KDV SWN M+ GY G
Sbjct: 323 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 382
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE---------FLPLMESRYGV 477
EAL++F M + P+ VT + VLSAC+ G SQG E L L G
Sbjct: 383 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 442
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDLA 532
+ Y +IDM + A + +P E N V W ++ +G+++ A
Sbjct: 443 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 498
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 15/236 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGII---------DSPLSI-TSLINMYSKCCQM 83
T I+ L CA +G EIH+Y L+ ++ D L + +LI+MYSKC
Sbjct: 403 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 462
Query: 84 KYALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCL 140
K A +F+++ E NV T+ MI G + L F M GV P+ YT C+
Sbjct: 463 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 522
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGL--DLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C + A+ K+IH V + ++ + L++ Y KC ++ A VF+ + +
Sbjct: 523 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 582
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ W +M+ GY G +AL++F +M K G T VL A G G
Sbjct: 583 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 344/643 (53%), Gaps = 63/643 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ C + + G H + G + +L+ MYS+C ++ A +F+ ++
Sbjct: 169 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 228
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFN------HMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+V ++N+++S + A+ LD F+ H + D + ++ C + AV
Sbjct: 229 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 288
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K++HG + G DV++G+AL++ Y KC ME A+KVF + +DVV WNAMV GY
Sbjct: 289 PQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 348
Query: 211 AQIGEFHKALEVFRRMSKEGI------WMSRF---------------------------- 236
+Q G F A E+F+ M KE I W +
Sbjct: 349 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408
Query: 237 -TVTGVLSALIMMGFFKNGRVVHGIVVKM----------GYDSGVPVMNALIDMYGKGKC 285
T+ VLSA +G F G +H +K G D + V NALIDMY K +
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468
Query: 286 VGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA--GFQPDLVTFST 341
A IF+ +EE+++ +W ++ H Q G+ + L+LF M+S G P+ T S
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC+HLAA+ G+QIH Y++ + ++ + F+ N L+DMY+KCG + A+ V
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSA------YFVANCLIDMYSKCGDVDTARHV 582
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F MS+K SW M+ GYGM G+G EALD+F M +A PD++TF+ VL ACSH G +
Sbjct: 583 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 642
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
QG + M + YG+ P EHY C ID+L R+G+L++A+ MP E VVW LL+
Sbjct: 643 DQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLS 702
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+H N +LAE A ++ ++ + G+Y L+SNIY G++++V IRH M++ ++K
Sbjct: 703 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 762
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSW++ + G +F DRSHP + IYA L SL R++ G
Sbjct: 763 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 805
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 243/515 (47%), Gaps = 56/515 (10%)
Query: 66 SPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
SP S+ T ++ Y C YAL V ++ P V+ +N +I ++
Sbjct: 94 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCR 152
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G PD +T P ++K C ++ + HGL+ G + +V+I +ALV Y +C
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212
Query: 185 MEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMS---KEGIWMSRFTV 238
+EEA +F+E+ R DV+ WN++V+ + + AL++F +M+ E R +
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 272
Query: 239 TGVLSALIMMGFFK---NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
+++ L G K + VHG ++ G V V NALID Y K + A+++F M
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDG-----------------------------------T 320
ME KD+ SWN+++ + Q GN +
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK--NGSCKDIDD 378
L LF +M+ +G P+ VT +VL AC+ L A G +IH Y + N L N + +D
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 379 VFMNNALMDMYTKCGSMRDAQMVF--TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ + NAL+DMY+KC S + A+ +F + +++V +W +MI G+ G +AL +F M
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 512
Query: 437 CEAK--LKPDEVTFVGVLSACSHSGFLSQGREF--LPLMESRYGVVPTIEHYTCVIDMLG 492
+ P+ T +L AC+H + G++ L RY C+IDM
Sbjct: 513 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV-ANCLIDMYS 571
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G ++ A + +M ++ + + W +++ +HG
Sbjct: 572 KCGDVDTARHVFDSM-SQKSAISWTSMMTGYGMHG 605
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 184/416 (44%), Gaps = 62/416 (14%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +V +YL C + AL V E + V WN ++ + + G A+ V RM + G
Sbjct: 98 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
FT+ VL A + ++ G HG++ G++S V + NAL+ MY + + EA
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 291 EIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRML------SAGFQPDLVTFST 341
IF+ + ++ D+ SWNSI++ H + N L LF +M + D+++
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC L A+ +++HG + NG DVF+ NAL+D Y KCG M +A V
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNG--------TFPDVFVGNALIDAYAKCGLMENAVKV 329
Query: 402 FTKMSKKDVASWNIMILGYGMDGQ-----------------------------------G 426
F M KDV SWN M+ GY G
Sbjct: 330 FNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCS 389
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE---------FLPLMESRYGV 477
EAL++F M + P+ VT + VLSAC+ G SQG E L L G
Sbjct: 390 HEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGE 449
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDLA 532
+ Y +IDM + A + +P E N V W ++ +G+++ A
Sbjct: 450 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 505
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 15/236 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGII---------DSPLSI-TSLINMYSKCCQM 83
T I+ L CA +G EIH+Y L+ ++ D L + +LI+MYSKC
Sbjct: 410 TIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 469
Query: 84 KYALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCL 140
K A +F+++ E NV T+ MI G + L F M GV P+ YT C+
Sbjct: 470 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 529
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGL--DLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C + A+ K+IH V + ++ + L++ Y KC ++ A VF+ + +
Sbjct: 530 LMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK 589
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ W +M+ GY G +AL++F +M K G T VL A G G
Sbjct: 590 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 331/586 (56%), Gaps = 11/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L +G+E+H +++R G + +LI MY KC + A VF+ +
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ ND +GL F MR+ V PD T +I C + +++HG
Sbjct: 262 I-SWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K G +V + ++L+ + +EA VF ++ +D+V W AM++GY + G K
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK 380
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E + M EG+ T+ VLSA +G G ++H + G S V V N+LID
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +C+ +ALE+F + K++ SW SI+ L F +M+ + +P+ VT
Sbjct: 441 MYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVT 499
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ + AL G++IH + + GL +G F+ NAL+DMY +CG M A
Sbjct: 500 LVSVLSACARIGALSCGKEIHAHALRTGLGFDG--------FLPNALLDMYVRCGRMEPA 551
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F +KDVASWNI++ GY G+G A+++F M E+ + PDE+TF +L ACS S
Sbjct: 552 WNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G ++ G E+ ME ++ + P ++HY V+D+LGRAG+L +AYE MP + +P +W
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R++ N +L E+AAQ +F+++ G Y+L+ N+Y GK++EV +R MR+ +
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+PGCSW+E+ +H F++ D HP+ K I A L ++ G
Sbjct: 731 TVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG 776
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 260/503 (51%), Gaps = 21/503 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T IA L+LC + +G +HSY+ +T +L++M+ + + A +VF +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E ++F++N ++ G+ + + L+ ++ M +G+ PD YTFPC+++ C + +
Sbjct: 156 A-ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H V + G + DV + +AL+ Y+KC + A VF+ +P RD + WNAM++GY +
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ L +F M + + T+T V+SA +G + GR VHG V+K G+ + V V
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N+LI M+ C EA +F ME KD+ SW ++++ +E+ G + + + M G
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T ++VL AC+ L L G +H + GL V + N+L+DMY+KC
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY--------VIVANSLIDMYSKCR 446
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A VF ++ K+V SW +ILG ++ + EAL F M LKP+ VT V VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLS 505
Query: 454 ACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
AC+ G LS G+E L G +P ++DM R G++ A+ +
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPAWNQFNSC-- 558
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
E + W LL G LA
Sbjct: 559 EKDVASWNILLTGYAQQGKGGLA 581
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 220/410 (53%), Gaps = 10/410 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K L + M++L V ++ T+ L++ C A E ++H V K L V +G+AL+
Sbjct: 77 KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ +++ + EA VF ++ RD+ WN +V GYA+ G F +AL ++ RM GI +
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T VL + GR VH V++ G++S V V+NALI MY K + A +F+ M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D SWN++++ + + LRLF M PDL+T ++V+ AC L GR
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++HGY++ G + +V +NN+L+ M++ G +A+MVF+KM KD+ SW M
Sbjct: 317 EVHGYVIKTGF--------VAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I GY +G ++A++ ++ M + PDE+T VLSAC+ G L +G L R G
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI-MLHEFADRTG 427
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ + +IDM + +++A E+ +PN+ N + W +++ RL+
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTSIILGLRLN 476
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + + C + + G+E+H Y+++TG + SLI M+S A VF+
Sbjct: 296 LMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++ ++ AMISG+ N K ++ + M GV+PD+ T ++ C + +
Sbjct: 356 KMEFK-DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLD 414
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +H + GL V + ++L++ Y KC+ +++AL+VF +P ++V+ W +++ G
Sbjct: 415 KGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLR 474
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSG 269
+AL F++M + + T+ VLSA +G G+ +H ++ +G+D
Sbjct: 475 LNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+P NAL+DMY + + A F EKD+ SWN ++T + Q G + LF +M+
Sbjct: 534 LP--NALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ PD +TF+++L ACS + G + H + + L S
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS------------ 638
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G + DA KM D A W ++
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/621 (35%), Positives = 353/621 (56%), Gaps = 20/621 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
S +SG+ FT + L+LCA + +L G+ +H+ + G+ L+ T+L NM
Sbjct: 215 MSPASGSGPVLRTFT-----SLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANM 269
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKY 135
Y+KC + A VF+ + V +NA+++G+ N A + M++ G PD
Sbjct: 270 YAKCRRPGDARRVFDRMPARDRV-AWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAV 328
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
T ++ C D A+ +++H + G D V + +A+++ Y KC ++ A KVF+ +
Sbjct: 329 TLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGM 388
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
R+ V WNAM+ GYA+ G+ +AL +F+RM EG+ ++ +V L A +GF GR
Sbjct: 389 QDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGR 448
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VH ++V++G +S V VMNALI MY K K A ++F+ + K SWN+++ Q G
Sbjct: 449 RVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNG 508
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + +RLF RM +PD T +++PA + ++ + R IHGY + L +
Sbjct: 509 SSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQ------ 562
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
DV++ AL+DMY KCG + A+ +F + V +WN MI GYG G GK A+++F
Sbjct: 563 --DVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + P+E TF+ VLSACSH+G + +G+E+ M+ YG+ P +EHY ++D+LGRAG
Sbjct: 621 MKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAG 680
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+L+EA+ MP E V+ +L A +LH N +LAE +AQR+F+LEP +VL++N
Sbjct: 681 KLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLAN 740
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY +++V +R M ++ ++K PG S ++LK+ +HTF S +H +AK IYA L
Sbjct: 741 IYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAK 800
Query: 616 LTARLREHGDCCAGTLFDSDS 636
L ++ G + D+DS
Sbjct: 801 LIEEIK-----AVGYVPDTDS 816
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 319 GTLRLFDRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
G L F M A G P L TF+++L C+ A L GR +H + GL+
Sbjct: 207 GALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSP-------- 258
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ AL +MY KC DA+ VF +M +D +WN ++ GY +G + A+ M M
Sbjct: 259 EALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQ 318
Query: 438 EAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E +PD VT V VL AC+ + L RE + R G + T ++D+ + G
Sbjct: 319 EEDGERPDAVTLVSVLPACADAQALGACRE-VHAFAVRGGFDEQVNVSTAILDVYCKCGA 377
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ A ++ M + N V W ++ +G+ A
Sbjct: 378 VDSARKVFDGMQDR-NSVSWNAMIKGYAENGDATEA 412
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 332/591 (56%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C+ L G+EIH ++ G+ + +LI+MY+KC ++ A VF+ +
Sbjct: 131 TFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAM 190
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V ++ + + + + + L ++ M Q V P + T+ ++ C + A+ +
Sbjct: 191 ASRDEV-SWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + + DV + +AL Y+KC ++A +VFE L RDV+ WN M+ G+
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ +A F RM +EG+ R T T VLSA G G+ +H K G S V
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFG 369
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI+MY K + +A ++F+ M ++D+ SW +++ + C + F +ML G +
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ +T+ VL ACS+ AL G++IH +V GL + D+ + NALM MY KCG
Sbjct: 430 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGL--------LADLAVTNALMSMYFKCG 481
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA VF MS +DV +WN +I G G +G+G EAL + M ++P+ TFV VLS
Sbjct: 482 SVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLS 541
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC + +GR M YG+VPT +HY C++D+L RAG L EA ++ L +P + +
Sbjct: 542 ACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSA 601
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LLAA R+H N ++ E AA+ +LEP + G YV +S IY A G + +V +R M
Sbjct: 602 AMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFM 661
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ V+K PG SWIE+ +H+F++ D+SHP + IYAEL +L +++ G
Sbjct: 662 KERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLG 712
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 249/482 (51%), Gaps = 11/482 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C +L G+++H ++LR G+ + +L+ +Y+ C + A +F+ S +
Sbjct: 35 LQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFS-NKS 93
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N MISG+ A + + F M+Q + PDK+TF ++ C + ++IH
Sbjct: 94 VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + GL D +G+AL++ Y KC + +A +VF+ + RD V W + YA+ G +
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L+ + M +E + SR T VLSA + + G+ +H +V+ Y S V V AL
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +A E+FE + +D+ +WN+++ G + F RML G PD T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++TVL AC+ L G++IH +GL + DV NAL++MY+K GSM+DA
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGL--------VSDVRFGNALINMYSKAGSMKDA 385
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF +M K+DV SW ++ Y Q E+ F M + +K +++T++ VL ACS+
Sbjct: 386 RQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNP 445
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+E + + G++ + ++ M + G + +A + M + V W T
Sbjct: 446 VALKWGKEIHAEV-VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMR-DVVTWNT 503
Query: 519 LL 520
L+
Sbjct: 504 LI 505
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 212/409 (51%), Gaps = 10/409 (2%)
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
D + D ++ + G D Y + L++ C + K++H + + G+ +VYI
Sbjct: 6 KDGWYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYI 65
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L+ Y C + EA ++F++ + VV WN M++GYA G +A +F M +E +
Sbjct: 66 TNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERL 125
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+FT +LSA GR +H V++ G + V NALI MY K V +A
Sbjct: 126 EPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARR 185
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ M +D SW ++ + + G + +L+ + ML +P +T+ VL AC LAA
Sbjct: 186 VFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAA 245
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+QIH +IV + DV ++ AL MY KCG+ +DA+ VF +S +DV
Sbjct: 246 LEKGKQIHAHIVESEYH--------SDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVI 297
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+WN MI G+ GQ +EA F M E + PD T+ VLSAC+ G L++G+E +
Sbjct: 298 AWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKE-IHAR 356
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
++ G+V + +I+M +AG + +A ++ MP + V W TLL
Sbjct: 357 AAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR-DVVSWTTLL 404
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 1/223 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT L CA L +G+EIH+ + G++ +LINMYSK MK A VF+
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 391
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + +V ++ ++ + D + F M Q GV +K T+ C++K C + +A+
Sbjct: 392 MP-KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKW 450
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K+IH V K GL D+ + +AL++ Y KC +E+A++VFE + +RDVV WN ++ G Q
Sbjct: 451 GKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQ 510
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
G +AL+ + M EG+ + T VLSA + + GR
Sbjct: 511 NGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGR 553
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 331/586 (56%), Gaps = 11/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L +G+E+H +++R G + +LI MY KC + A VF+ +
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDR 261
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ ND +GL F MR+ V PD T +I C + +++HG
Sbjct: 262 I-SWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHG 320
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K G +V + ++L+ + +EA VF ++ +D+V W AM++GY + G K
Sbjct: 321 YVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEK 380
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E + M EG+ T+ VLSA +G G ++H + G S V V N+LID
Sbjct: 381 AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLID 440
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +C+ +ALE+F + K++ SW SI+ L F +M+ + +P+ VT
Sbjct: 441 MYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVT 499
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ + AL G++IH + + GL +G F+ NAL+DMY +CG M A
Sbjct: 500 LVSVLSACARIGALSCGKEIHAHALRTGLGFDG--------FLPNALLDMYVRCGRMEPA 551
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F +KDVASWNI++ GY G+G A+++F M E+ + PDE+TF +L ACS S
Sbjct: 552 WNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G ++ G E+ ME ++ + P ++HY V+D+LGRAG+L +AYE MP + +P +W
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R++ N +L E+AAQ +F+++ G Y+L+ N+Y GK++EV +R MR+ +
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+PGCSW+E+ +H F++ D HP+ K I A L ++ G
Sbjct: 731 TVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG 776
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 260/503 (51%), Gaps = 21/503 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T IA L+LC + +G +HSY+ +T +L++M+ + + A +VF +
Sbjct: 96 TYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKM 155
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E ++F++N ++ G+ + + L+ ++ M +G+ PD YTFPC+++ C + +
Sbjct: 156 A-ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARG 214
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H V + G + DV + +AL+ Y+KC + A VF+ +P RD + WNAM++GY +
Sbjct: 215 REVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFEN 274
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ L +F M + + T+T V+SA +G + GR VHG V+K G+ + V V
Sbjct: 275 DVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVN 334
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N+LI M+ C EA +F ME KD+ SW ++++ +E+ G + + + M G
Sbjct: 335 NSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVV 394
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T ++VL AC+ L L G +H + GL V + N+L+DMY+KC
Sbjct: 395 PDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY--------VIVANSLIDMYSKCR 446
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A VF ++ K+V SW +ILG ++ + EAL F M LKP+ VT V VLS
Sbjct: 447 CIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLS 505
Query: 454 ACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
AC+ G LS G+E L G +P ++DM R G++ A+ +
Sbjct: 506 ACARIGALSCGKEIHAHALRTGLGFDGFLP-----NALLDMYVRCGRMEPAWNQFNSC-- 558
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
E + W LL G LA
Sbjct: 559 EKDVASWNILLTGYAQQGKGGLA 581
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 220/410 (53%), Gaps = 10/410 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K L + M++L V ++ T+ L++ C A E ++H V K L V +G+AL+
Sbjct: 77 KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ +++ + EA VF ++ RD+ WN +V GYA+ G F +AL ++ RM GI +
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T VL + GR VH V++ G++S V V+NALI MY K + A +F+ M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D SWN++++ + + LRLF M PDL+T ++V+ AC L GR
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++HGY++ G + +V +NN+L+ M++ G +A+MVF+KM KD+ SW M
Sbjct: 317 EVHGYVIKTGF--------VAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAM 368
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I GY +G ++A++ ++ M + PDE+T VLSAC+ G L +G L R G
Sbjct: 369 ISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI-MLHEFADRTG 427
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ + +IDM + +++A E+ +PN+ N + W +++ RL+
Sbjct: 428 LTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTSIILGLRLN 476
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + + C + + G+E+H Y+++TG + SLI M+S A VF+
Sbjct: 296 LMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++ ++ AMISG+ N K ++ + M GV+PD+ T ++ C + +
Sbjct: 356 KMEFK-DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLD 414
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +H + GL V + ++L++ Y KC+ +++AL+VF +P ++V+ W +++ G
Sbjct: 415 KGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLR 474
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSG 269
+AL F++M + + T+ VLSA +G G+ +H ++ +G+D
Sbjct: 475 LNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+P NAL+DMY + + A F EKD+ SWN ++T + Q G + LF +M+
Sbjct: 534 LP--NALLDMYVRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIE 590
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ PD +TF+++L ACS + G + H + + L S
Sbjct: 591 SDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYAS------------ 638
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G + DA KM D A W ++
Sbjct: 639 VVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALL 672
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/630 (35%), Positives = 351/630 (55%), Gaps = 53/630 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C NL+ G ++H+ ++ G+ + L+ +Y + ++ A +F+ +S E N
Sbjct: 17 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-ERN 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF++ A++ + + + F M GV PD + FP + K C ++ K ++
Sbjct: 76 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +G + + + ++++ ++KC M+ A + FEE+ +DV +WN MV+GY GEF K
Sbjct: 136 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 195
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALI 277
AL VFR+M EG+ + T+ +SA + ++GR +HG +K+ DS + V N+L+
Sbjct: 196 ALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 255
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV--HEQCGNHDGTLRLFDRM-------- 327
D Y K + V A F M+++ D+ SWN+++ V Q G+ L F RM
Sbjct: 256 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFS 315
Query: 328 -------------LSAGFQP--------------------DLVTFSTVLPACSHLAALMH 354
+SA Q + VT + LPACS LAAL
Sbjct: 316 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 375
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G++IH +I+ GL +C F+ N+L+DMY +CGS++ ++ +F M ++D+ SWN
Sbjct: 376 GKEIHQFIIRCGL---DTCN-----FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWN 427
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+MI YGM G G +A+++F LKP+ +TF +LSACSHSG + +G ++ +M++
Sbjct: 428 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 487
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
Y + P +E Y C++D+L RAGQ NE E MP E N VW +LL A R+H N DLAE
Sbjct: 488 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 547
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
AA+ +F+LEP GNYVLM+NIY A G++E+ IR M+++ V K PGCSWIE+K LH
Sbjct: 548 AARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLH 607
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
+F+ D SHP + I A++ SL ++E G
Sbjct: 608 SFVVGDTSHPLMEQISAKMESLYFDIKEIG 637
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 47/321 (14%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKC------------ 80
T +++ C + + L+ G+EIH Y ++ +DS L + SL++ Y+KC
Sbjct: 214 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 273
Query: 81 -------------------------------CQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+M A VF+ LS +V +N++IS
Sbjct: 274 IKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTR-DVVVWNSIISAC 332
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + LD M V + T + C + A+ + K+IH + + GLD
Sbjct: 333 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 392
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+I ++L++ Y +C ++++ ++F+ +P RD+V WN M++ Y G A+ +F++
Sbjct: 393 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 452
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G+ + T T +LSA G + G + + + D V ++D+ + E
Sbjct: 453 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 512
Query: 289 ALEIFEMME-EKDIFSWNSIM 308
LE E M E + W S++
Sbjct: 513 TLEFIEKMPFEPNAAVWGSLL 533
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 116/251 (46%), Gaps = 48/251 (19%)
Query: 334 PD--LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD + ++++L C L L G Q+H +VVNG+ D+ + F+ + L+++Y +
Sbjct: 6 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV-------DVCE-FLGSRLLEVYCQ 57
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + DA+ +F KMS+++V SW ++ Y G +E + +F M ++PD F V
Sbjct: 58 TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKV 117
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
ACS +++Y R G+ + Y+ L++ E
Sbjct: 118 FKACSE-----------------------LKNY--------RVGK--DVYDYMLSIGFEG 144
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVF-QLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N V ++L G D+ A+R F ++E + +M + Y + G++++ L++
Sbjct: 145 NSCVKGSILDMFIKCGRMDI----ARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVF 200
Query: 571 HTMRQQNVRKN 581
M + V+ N
Sbjct: 201 RKMVLEGVKPN 211
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 91/185 (49%), Gaps = 3/185 (1%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
N T +++L C+ L++G+EIH +++R G+ + SLI+MY +C ++ +
Sbjct: 352 NVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 411
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F +L + ++ ++N MIS + + F ++ F R +G+ P+ TF L+ C
Sbjct: 412 RRIF-DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSH 470
Query: 147 VMAVLEVKKIHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
+ E K ++ + +D V + +V+ + E L+ E++P + +W
Sbjct: 471 SGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWG 530
Query: 205 AMVNG 209
+++
Sbjct: 531 SLLGA 535
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/629 (34%), Positives = 356/629 (56%), Gaps = 42/629 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI--NMYSKCCQMKYA 86
P+ + SL+L + +++ ++IH+++++TG+ ++ +++ LI + S+ + YA
Sbjct: 23 PYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ +FN++ EPN+F +N+MI G + L FF M GV P+ YTFP L+K C
Sbjct: 83 ISLFNSIE-EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ----------------------- 183
+ + E K+IH V KLG DV+I ++L+N Y +
Sbjct: 142 LASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTAL 201
Query: 184 --------FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+M+ A ++F+E+P++DVV WNAM+ GYAQ+G +AL +F M K + +
Sbjct: 202 IAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE 261
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ VLSA G + + G S + ++NALIDMY K + A E+F+
Sbjct: 262 STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDD 321
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M E+D+ SWN ++ + ++ L LF ML++G +P +TF ++LP+C+HL A+ G
Sbjct: 322 MLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLG 381
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+ IH YI N + ++ +L+D+Y KCG++ A+ VF M K +ASWN
Sbjct: 382 KWIHAYINKNF--------NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNA 433
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
MI G M GQ +A ++FS M ++P+E+TFVG+LSAC H+G + G++F M Y
Sbjct: 434 MICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY 493
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ P +HY C+ID+LGRAG EA L M + + +W +LL A R HG +L E+
Sbjct: 494 KISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELV 553
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+R+F+LEP + G YVL+SNIY GK+++V IR + + ++K PGC+ IE+ + +H
Sbjct: 554 AERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHE 613
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHG 624
F+ D+ HP+++ IY L + +L+ G
Sbjct: 614 FLVGDKVHPQSEDIYRMLEEVDEQLKVFG 642
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 8/294 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
N P +T ++ L CA L G + S++ G+ + + +LI+MYSKC ++ A
Sbjct: 256 NVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTA 315
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
+F+++ E +V ++N MI G Y++ ++K L F M GV P + TF ++ C
Sbjct: 316 RELFDDM-LERDVISWNVMIGG-YTHMCSYKEALALFREMLASGVEPTEITFLSILPSCA 373
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ A+ K IH + K + + ++L++ Y KC + A +VF+ + ++ + WNA
Sbjct: 374 HLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNA 433
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKM 264
M+ G A G+ KA E+F +MS +GI + T G+LSA G G + +V
Sbjct: 434 MICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDY 493
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNH 317
+ID+ G+ EA + + ME K D W S++ C +H
Sbjct: 494 KISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGA---CRDH 544
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 357/599 (59%), Gaps = 18/599 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PFT A + L A ++KG ++H+ ++++G+ + S++NMYSK + A
Sbjct: 192 NPFTFAAVLGGL---AADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAK 248
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+++ N ++N+MI+GF +N + + F MR GV + F +IK C ++
Sbjct: 249 AVFDSME-NRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANI 307
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAM 206
+ K++H V K G D D+ I +AL+ Y KC +++A K+F + +++VV W A+
Sbjct: 308 KEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAI 367
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++GY Q G +A+ +F +M +EG+ + FT + +L+A + + +H +VVK Y
Sbjct: 368 ISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV----SPSQIHALVVKTNY 423
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
++ V AL D Y K EA +IFE+++EKDI +W+++++ + Q G+ +G +++F +
Sbjct: 424 ENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQ 483
Query: 327 MLSAGFQPDLVTFSTVLPACSH-LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G +P+ TFS+VL AC+ A++ G+Q H + +G + N C +++AL
Sbjct: 484 LAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS-NALC-------VSSAL 535
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G++ A VF + +D+ SWN MI GY G GK++L +F M L+ D
Sbjct: 536 VTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDG 595
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TF+GV+SAC+H+G +++G+ + LM Y +VPT+EHY+C++D+ RAG L +A +L
Sbjct: 596 ITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLIN 655
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP A +WRTLLAA R+H N L E+AA+++ L+P YVL+SNIY G ++E
Sbjct: 656 KMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQE 715
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M + V+K G SWIE+K+ +F++ D SHP++ IY +L L+ RL++ G
Sbjct: 716 RAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAG 774
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 256/499 (51%), Gaps = 25/499 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ L++C + G+++H ++ G ++ TSL++MY K ++ VF+ +
Sbjct: 96 SCV--LKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NV ++ ++++G+ N + L F+ M+ G+ P+ +TF ++ AV +
Sbjct: 154 RVK-NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H +V K GLD +++G+++VN Y K + +A VF+ + R+ V WN+M+ G+
Sbjct: 213 VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTN 272
Query: 214 GEFHKALEVFRRMSKEGIWMSRF---TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G +A E+F RM EG+ +++ TV + + + M F K +H V+K G D +
Sbjct: 273 GLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQ---LHCQVIKNGSDFDL 329
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ AL+ Y K + +A ++F MM +++ SW +I++ + Q G D + LF +M
Sbjct: 330 NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P+ T+ST+L A A + QIH +V + S + AL D Y
Sbjct: 390 EGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPS--------VGTALSDSY 437
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K G +A +F + +KD+ +W+ M+ GY G + A+ +F + + ++P+E TF
Sbjct: 438 SKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFS 497
Query: 450 GVLSACSH-SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL+AC+ + + QG++F + G + + ++ M + G + A E+
Sbjct: 498 SVLNACAAPTASVEQGKQFHSC-SIKSGFSNALCVSSALVTMYAKRGNIESANEV-FKRQ 555
Query: 509 NEANPVVWRTLLAASRLHG 527
+ + V W ++++ HG
Sbjct: 556 VDRDLVSWNSMISGYAQHG 574
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 226/431 (52%), Gaps = 15/431 (3%)
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
N ++ F ND + L+ F +R+ G D + C++K C + + K++H K
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
G DV +G++LV+ Y+K + +E+ +VF+E+ +++VV W +++ GY Q G +AL++
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M EGI + FT VL L G + G VH +V+K G DS + V N++++MY K
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
V +A +F+ ME ++ SWNS++ G LF RM G + F+TV
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+ C+++ + +Q+H ++ KNGS D++ + ALM Y+KC + DA +F
Sbjct: 301 IKLCANIKEMSFAKQLHCQVI-----KNGSDFDLN---IKTALMVAYSKCSEIDDAFKLF 352
Query: 403 TKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
M ++V SW +I GY +G+ A+++F M ++P+ T+ +L+A + +
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NAAV 409
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
S + ++++ Y P++ T + D + G NEA ++ + +E + V W +L+
Sbjct: 410 SPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKI-FELIDEKDIVAWSAMLS 466
Query: 522 ASRLHGNTDLA 532
G+ + A
Sbjct: 467 GYAQMGDIEGA 477
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 339/586 (57%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+LC ++L++G+EIH ++ +G + ++T ++NMY+KC Q+ A +F+ + E +
Sbjct: 37 LKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMP-ERD 95
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +N MISG+ N FA L M + G PD T ++ D + +HG
Sbjct: 96 LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + G + V + +ALV+ Y KC + A +F+ + R VV WN+M++GY Q G+
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F++M EG+ + TV G L A +G + G+ VH +V ++ DS V VMN+LI
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +IF+ + K + SWN+++ + Q G + L F M S +PD T
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+V+PA + L+ + IHG ++ L KN VF+ AL+DMY KCG++ A
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKN--------VFVMTALVDMYAKCGAIHTA 387
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F M+ + V +WN MI GYG G GK ++++F M + +KP+++TF+ LSACSHS
Sbjct: 388 RKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G F M+ YG+ PT++HY ++D+LGRAG+LN+A++ MP + V+
Sbjct: 448 GLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA 507
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N DL E AA +F+L P G +VL++NIY + +V +R M + +
Sbjct: 508 MLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGL 567
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCS +E+ + +H+F S SHP++K IY+ L +L +R G
Sbjct: 568 QKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAG 613
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 215/423 (50%), Gaps = 10/423 (2%)
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
M+ G+ + L FF+ M+ V P Y F L+K C D + K+IHG V G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+++ + +VN Y KC+ + +A +F+ +P RD+V WN M++GYAQ G AL +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RMS+EG T+ +L A+ + G VHG V++ G++S V V AL+DMY K
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A IF+ M+ + + SWNS++ + Q G+ +G + +F +ML G QP VT L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
AC+ L L G+ +H + K DV + N+L+ MY+KC + A +F
Sbjct: 241 ACADLGDLERGKFVHKLV--------DQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKN 292
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ K + SWN MILGY +G EAL+ F M +KPD T V V+ A + Q
Sbjct: 293 LRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQA 352
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ L+ R+ + + T ++DM + G ++ A +L M N + + W ++
Sbjct: 353 KWIHGLVIRRF-LDKNVFVMTALVDMYAKCGAIHTARKL-FDMMNARHVITWNAMIDGYG 410
Query: 525 LHG 527
HG
Sbjct: 411 THG 413
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 211/444 (47%), Gaps = 23/444 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L A L+ G +H Y+LR G T+L++MYSKC + A +F+ +
Sbjct: 133 TIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM 192
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
V ++N+MI G+ + A + F M GV P T + C D+ +
Sbjct: 193 D-HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG 251
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H LV +L LD DV + ++L++ Y KC+ ++ A +F+ L + +V WNAM+ GYAQ
Sbjct: 252 KFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQN 311
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G ++AL F M I FT+ V+ AL + + + +HG+V++ D V VM
Sbjct: 312 GCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVM 371
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+DMY K + A ++F+MM + + +WN+++ + G ++ LF M +
Sbjct: 372 TALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIK 431
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ +TF L ACSH G G + K+ + D + A++D+ + G
Sbjct: 432 PNDITFLCALSACSH-----SGLVEEGLCFFESMKKDYGIEPTMDHY--GAMVDLLGRAG 484
Query: 394 SMRDAQMVFTKMS-KKDVASWNIMI----LGYGMDGQGKEALDMFSCMCEAKLKPDE--- 445
+ A KM K + + M+ + +D K A ++F KL PD+
Sbjct: 485 RLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIF------KLNPDDGGY 538
Query: 446 -VTFVGVLSACSHSGFLSQGREFL 468
V + + S G +++ R +
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIM 562
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 143/274 (52%), Gaps = 10/274 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFV 89
T T + +L CA +L++G+ +H + + + DS +S+ SLI+MYSKC ++ A +
Sbjct: 231 TNVTVMGALHACADLGDLERGKFVHKLVDQLKL-DSDVSVMNSLISMYSKCKRVDIAADI 289
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F NL + ++NAMI G+ N + L+ F M+ + PD +T +I ++
Sbjct: 290 FKNLR-NKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K IHGLV + LD +V++ +ALV+ Y KC + A K+F+ + R V+ WNAM++G
Sbjct: 349 PRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDG 408
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y G ++E+F+ M K I + T LSA G + G M D G
Sbjct: 409 YGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC---FFESMKKDYG 465
Query: 270 V-PVMN---ALIDMYGKGKCVGEALEIFEMMEEK 299
+ P M+ A++D+ G+ + +A + + M K
Sbjct: 466 IEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIK 499
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 350/599 (58%), Gaps = 10/599 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A+LQ C + +++G IH+ +L++ + +LI MY++ +M A +F N+
Sbjct: 320 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 379
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + ++N+M+SGF N + L F++ MR G PD +I L
Sbjct: 380 D-DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNG 438
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+IH K GLD D+ +G++LV+ Y K M+ +F+++P +DVV W ++ G+AQ
Sbjct: 439 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 498
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +ALE+FR + EGI + ++ +L A + + + +H +++ G S + +
Sbjct: 499 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQ 557
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N ++D+YG+ V A +FE++E KD+ SW S+++ + G + L LF M G +
Sbjct: 558 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVE 617
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD ++ ++L A + L+AL G++IHG+++ G GS + + L+DMY +CG
Sbjct: 618 PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS--------LASTLVDMYARCG 669
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ ++ VF + KD+ W MI YGM G G+ A+D+F M + + PD + FV VL
Sbjct: 670 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 729
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG +++GR FL M+ Y + P EHY C++D+LGRA L EAY+ M E
Sbjct: 730 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTA 789
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL A ++H N +L EIAAQ++ +++P + GNYVL+SN+Y A ++++V ++R M
Sbjct: 790 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRM 849
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
+ ++KNPGCSWIE+ + +HTF++ D+SHP++ IY++L +T +L + G A T F
Sbjct: 850 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKF 908
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 256/499 (51%), Gaps = 11/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T L+ C + + G E+H ++ G + S++ MY+KC + A
Sbjct: 213 PLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 272
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +V ++N+MIS + SN + + L F M++ + P+ YTF ++ C D
Sbjct: 273 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 332
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + IH V K ++V++ +AL+ Y + M EA +F + D + WN+M++
Sbjct: 333 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 392
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ Q G +H+AL+ + M G V +++A G NG +H +K G DS
Sbjct: 393 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDS 452
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+L+DMY K + IF+ M +KD+ SW +I+ H Q G+H L LF +
Sbjct: 453 DLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ 512
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G D++ S++L ACS L + ++IH YI+ GL+ D+ + N ++D+
Sbjct: 513 LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS---------DLVLQNGIVDV 563
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG++ A +F + KDV SW MI Y +G EAL++F M E ++PD ++
Sbjct: 564 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 623
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +LSA + L +G+E + R G V + ++DM R G L ++ + +
Sbjct: 624 VSILSAAASLSALKKGKEIHGFL-IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 682
Query: 509 NEANPVVWRTLLAASRLHG 527
N+ + V+W +++ A +HG
Sbjct: 683 NK-DLVLWTSMINAYGMHG 700
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 253/495 (51%), Gaps = 15/495 (3%)
Query: 30 FTLATCIAS-LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYAL 87
F+L +S L+LC + L +GQ++H++M+ + + +S T L+ MY KC + A
Sbjct: 111 FSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAE 170
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +FT+NAMI + +N L+ + MR G+ D TFPC++K C +
Sbjct: 171 KLFDGMP-HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLL 229
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
++HGL K G V++ +++V Y KC + A ++F+ +P + DVV WN+M
Sbjct: 230 KDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 289
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ Y+ G+ +AL +F M K + + +T L A F K G +H V+K Y
Sbjct: 290 ISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 349
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
V V NALI MY + +GEA IF M++ D SWNS+++ Q G + L+ +
Sbjct: 350 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 409
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M AG +PDLV +++ A + ++G QIH Y + NGL D+ + N+L+
Sbjct: 410 MRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLD--------SDLQVGNSLV 461
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY K SM+ +F KM KDV SW +I G+ +G AL++F + + D +
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 521
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
+L ACS +S +E + R G+ + ++D+ G G ++ A +
Sbjct: 522 MISSILLACSGLKLISSVKEIHSYI-IRKGLSDLVLQ-NGIVDVYGECGNVDYAARM-FE 578
Query: 507 MPNEANPVVWRTLLA 521
+ + V W ++++
Sbjct: 579 LIEFKDVVSWTSMIS 593
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 202/410 (49%), Gaps = 13/410 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHG-LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ +++ C A+ E +++H ++ L V++ + LV Y KC + +A K+F+
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P + + WNAM+ Y GE +LE++R M GI + T +L A ++ + G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQ 313
VHG+ +K GY S V V N+++ MY K + A ++F+ M EK D+ SWNS+++ +
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LRLF M A P+ TF L AC + + G IH ++ + N
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN--- 352
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
VF+ NAL+ MY + G M +A +F M D SWN M+ G+ +G EAL +
Sbjct: 353 -----VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 407
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +A KPD V + +++A + SG G + + + G+ ++ ++DM +
Sbjct: 408 HEMRDAGQKPDLVAVISIIAASARSGNTLNGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAK 466
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ + MP++ + V W T++A +G+ A + R QLE
Sbjct: 467 FCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGSHSRA-LELFREVQLE 514
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 353/586 (60%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + G+ +H++++++G + ++S + MY+KC + A+ +F+ + E +
Sbjct: 305 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERD 363
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N +IS +Y + K L+ F M+ G PD T +I C ++ + K+IH
Sbjct: 364 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 423
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G LD ++ SALV+ Y KC +E A +VFE++ ++VV WN+M+ GY+ G+
Sbjct: 424 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 483
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+E+FRRM +EGI + T++ +L A + G+ +HG +++ ++ + V ++LID
Sbjct: 484 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 543
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K +G A +F+ M + ++ SWN +++ + + G++ L +F M AG +PD +T
Sbjct: 544 LYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 603
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F++VLPACS LA L G++IH +I+ + L +I++V M AL+DMY KCG++ +A
Sbjct: 604 FTSVLPACSQLAVLEKGKEIHNFIIESKL-------EINEVVM-GALLDMYAKCGAVDEA 655
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F ++ ++D SW MI YG GQ EAL +F M ++ KPD+VTF+ +LSACSH+
Sbjct: 656 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 715
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWR 517
G + +G + M + YG P +EHY+C+ID+LGR G+L EAYE+ P+ V +
Sbjct: 716 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLS 775
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TL +A LH DL E + + + +P Y+++SN+Y + K++EV +R +++
Sbjct: 776 TLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELG 835
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++KNPGCSWIE+ +H F+ D+SHP+A IY + L + + ++
Sbjct: 836 LKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKY 881
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 265/481 (55%), Gaps = 13/481 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH ++ G+ ++ SLIN+Y C + A VF + ++ +N +++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 111 SNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N +GL+ F+ + L PD +T+P ++K C + V K +H V K G +DV
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ S+ V Y KC E+A+K+F+E+P RDV WN +++ Y Q G+ KALE+F M
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G T+T V+S+ + + G+ +H +V+ G+ V +AL+DMYGK C+ A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
E+FE ++ K++ SWNS++ + G+ + LF RM G +P L T S++L ACS
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRS 513
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
L G+ IHGYI+ N + D+F+N++L+D+Y KCG++ A+ VF M K +
Sbjct: 514 VNLQLGKFIHGYIIRNRVEA--------DIFVNSSLIDLYFKCGNIGSAENVFQNMPKTN 565
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V SWN+MI GY G EAL +F+ M +A +KPD +TF VL ACS L +G+E
Sbjct: 566 VVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHN 625
Query: 470 -LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++ES+ + + ++DM + G ++EA + +P E + V W +++AA HG
Sbjct: 626 FIIESKLEINEVV--MGALLDMYAKCGAVDEALHIFNQLP-ERDFVSWTSMIAAYGSHGQ 682
Query: 529 T 529
Sbjct: 683 A 683
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 196/374 (52%), Gaps = 11/374 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL T I+S CA +L++G+EIH ++R+G ++L++MY KC ++ A VF
Sbjct: 401 TLTTVISS---CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVF 457
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ NV ++N+MI+G+ + ++ F M + G+ P T ++ C + +
Sbjct: 458 EQIQ-RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 516
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K IHG + + ++ D+++ S+L++ Y KC + A VF+ +P +VV WN M++GY
Sbjct: 517 QLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGY 576
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++G + +AL +F M K G+ T T VL A + + G+ +H +++ +
Sbjct: 577 VKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINE 636
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
VM AL+DMY K V EAL IF + E+D SW S++ + G L+LF++M +
Sbjct: 637 VVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQS 696
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD VTF +L ACSH + G Y +A+ G ++ + L+D+
Sbjct: 697 DAKPDKVTFLAILSACSHAGLVDEG----CYYFNQMIAEYGFKPAVEHY---SCLIDLLG 749
Query: 391 KCGSMRDAQMVFTK 404
+ G +R+A + +
Sbjct: 750 RVGRLREAYEILQR 763
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/608 (34%), Positives = 340/608 (55%), Gaps = 12/608 (1%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F +G++ FTL+T L+ CA+ NL+ GQ +HS +R G L++M
Sbjct: 318 FCRMTGSEINFSKFTLSTV---LKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDM 374
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
YSKC AL VF + +P+V +++A+I+ + + + F MR GV+P+++T
Sbjct: 375 YSKCGLAGDALKVFVRIE-DPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
L+ D+ + + IH V K G + D + +ALV Y+K +++ +VFE
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
RD++ WNA+++G+ L +F +M EG + +T +L + + G+
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH +VK D V AL+DMY K + + +A IF + ++D+F+W I+ + Q G
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 613
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ ++ F +M G +P+ T ++ L CS +A L GRQ+H + G +
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQS-------- 665
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+F+ +AL+DMY KCG + DA++VF + +D SWN +I GY GQG +AL F M
Sbjct: 666 GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM 725
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ PDEVTF+GVLSACSH G + +G++ + YG+ PTIEHY C++D+LGRAG+
Sbjct: 726 LDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGK 785
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
+E M +N ++W T+L A ++HGN + E AA ++F+LEP NY+L+SN+
Sbjct: 786 FHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNM 845
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
+ A G +++V ++R M + V+K PGCSW+E+ +H F+S D SHP+ + I+ +L L
Sbjct: 846 FAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDL 905
Query: 617 TARLREHG 624
+L G
Sbjct: 906 HQKLMSVG 913
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 265/502 (52%), Gaps = 18/502 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FT AT + + +C +L+ G+++H+ ++ G ++L+++Y+KC +M A
Sbjct: 228 NEFTYATALKACSMC---LDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAE 284
Query: 88 FVFNNLSCEP--NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
VF C P N ++NA+++GF A K L+ F M + K+T ++K C
Sbjct: 285 RVF---LCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCA 341
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + + +H L ++G +LD +I LV+ Y KC +ALKVF + DVV W+A
Sbjct: 342 NSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSA 401
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Q G+ +A EVF+RM G+ ++FT+ ++SA +G G +H V K G
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYG 461
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
++ V NAL+ MY K V + +FE +D+ SWN++++ D LR+F+
Sbjct: 462 FEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFN 521
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ML+ GF P++ TF ++L +CS L+ + G+Q+H IV N L N F+ AL
Sbjct: 522 QMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND--------FVGTAL 573
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY K + DA+ +F ++ K+D+ +W +++ GY DGQG++A+ F M +KP+E
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNE 633
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
T LS CS L GR+ L M + G + + ++DM + G + +A E+
Sbjct: 634 FTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA-EVVF 691
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
+ V W T++ HG
Sbjct: 692 DGLVSRDTVSWNTIICGYSQHG 713
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 235/428 (54%), Gaps = 9/428 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA + +L +G+ IH ++++GI SL+N+Y+KC YA VF + E +
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP-ERD 193
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A+I+GF + + ++ F MR+ GV +++T+ +K C + + K++H
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K+G D+++GSALV+ Y KC M A +VF +P ++ V WNA++NG+AQ+G+ K
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +F RM+ I S+FT++ VL G + G++VH + +++G + + L+D
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K G+AL++F +E+ D+ SW++I+T +Q G +F RM +G P+ T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++++ A + L L +G IH + G + + + NAL+ MY K GS++D
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNT--------VCNALVTMYMKIGSVQDG 485
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF + +D+ SWN ++ G+ + L +F+ M P+ TF+ +L +CS
Sbjct: 486 CRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSL 545
Query: 459 GFLSQGRE 466
+ G++
Sbjct: 546 SDVDLGKQ 553
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 197/407 (48%), Gaps = 17/407 (4%)
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
++GLDF + R + +++ C + E K IHG V K G++ D ++ ++L
Sbjct: 117 WRGLDFDSKGRL-------RQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSL 169
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
VN Y KC A KVF E+P RDVV W A++ G+ G A+ +F M +EG+ +
Sbjct: 170 VNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANE 229
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
FT L A M + G+ VH +K+G S + V +AL+D+Y K + A +F
Sbjct: 230 FTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLC 289
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M +++ SWN+++ Q G+ + L LF RM + T STVL C++ L G
Sbjct: 290 MPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAG 349
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+ +H + G D F++ L+DMY+KCG DA VF ++ DV SW+
Sbjct: 350 QIVHSLAIRIGCEL--------DEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSA 401
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I GQ +EA ++F M + + P++ T ++SA + G L G E + +Y
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYG-ESIHACVCKY 460
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G ++ M + G + + + A N + + W LL+
Sbjct: 461 GFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR-DLISWNALLSG 506
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/609 (34%), Positives = 348/609 (57%), Gaps = 24/609 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + L G+++H+Y LR G ++S + I +L+ MY K ++ + +
Sbjct: 196 FTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFI-INTLVAMYGKMGKLASSKVL 254
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ ++ T+N ++S N+ + L++ M GV PD +T ++ C +
Sbjct: 255 LGSFEGR-DLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEM 313
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++H K G LD + ++GSALV+ Y C+ + +VF+ + R + LWNAM+
Sbjct: 314 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMIT 373
Query: 209 GYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GYAQ +AL +F M + G+ + T+ GV+ A + G F +HG VVK G D
Sbjct: 374 GYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLD 433
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--- 324
V NAL+DMY + + A IF ME++D+ +WN+I+T + H+ L +
Sbjct: 434 RDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKM 493
Query: 325 --------DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+R +P+ +T T+LP+C+ L+AL G++IH Y + N LA
Sbjct: 494 QILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT------- 546
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + +AL+DMY KCG ++ ++ VF ++ ++V +WN++++ YGM G ++A+DM M
Sbjct: 547 -DVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMM 605
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+KP+EVTF+ V +ACSHSG +++G + M+ YGV P+ +HY CV+D+LGRAG+
Sbjct: 606 MVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGR 665
Query: 497 LNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ EAY+L +P + W +LL A R+H N ++ EIAAQ + QLEP +YVL++N
Sbjct: 666 VKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 725
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY + G + + ++R M+ Q VRK PGCSWIE D +H F++ D SHP+++ + L +
Sbjct: 726 IYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLET 785
Query: 616 LTARLREHG 624
L R+R+ G
Sbjct: 786 LWERMRKEG 794
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/559 (27%), Positives = 268/559 (47%), Gaps = 34/559 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
A L+ A ++ G++IH+++ + G +DS +L+N+Y KC VF+ +S
Sbjct: 98 ALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS- 156
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
E N ++N++IS S + L+ F M V P +T + C + +L
Sbjct: 157 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLM 216
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G +L+ +I + LV Y K + + + RD+V WN +++ Q
Sbjct: 217 GKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQ 275
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
+F +ALE R M EG+ FT++ VL A + + G+ +H +K G D
Sbjct: 276 NEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 335
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSA 330
V +AL+DMY K V +F+ M ++ I WN+++T + Q + L LF M SA
Sbjct: 336 VGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESA 395
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + T + V+PAC A IHG++V GL + D F+ NALMDMY+
Sbjct: 396 GLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDR--------DRFVQNALMDMYS 447
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-----------CEA 439
+ G + A+ +F KM +D+ +WN +I GY + ++AL M M
Sbjct: 448 RLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRV 507
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKP+ +T + +L +C+ L++G+E + + + + + ++DM + G L
Sbjct: 508 SLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 566
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ ++ +P N + W ++ A +HGN+ A I R+ ++ G N V +++ A
Sbjct: 567 SRKVFDQIPIR-NVITWNVIVMAYGMHGNSQDA-IDMLRMMMVQ-GVKPNEVTFISVFAA 623
Query: 560 ---GGKYEEVLDIRHTMRQ 575
G E L I + M++
Sbjct: 624 CSHSGMVNEGLKIFYNMKK 642
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 197/398 (49%), Gaps = 15/398 (3%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFME 186
LG+ PD + FP L+K D+ + K+IH V+K G +D V + + LVN Y KC
Sbjct: 87 LGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 146
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL---S 243
KVF+ + R+ V WN++++ ++ ALE FR M E + S FT+ V S
Sbjct: 147 AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACS 206
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
M G+ VH ++ G + ++N L+ MYGK + + + E +D+ +
Sbjct: 207 NFPMPEGLLMGKQVHAYGLRKGELNSF-IINTLVAMYGKMGKLASSKVLLGSFEGRDLVT 265
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN++++ Q L M+ G +PD T S+VLPACSHL L G+++H Y +
Sbjct: 266 WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYAL 325
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
KNGS ++ F+ +AL+DMY C + VF M + + WN MI GY +
Sbjct: 326 -----KNGSLD--ENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQN 378
Query: 424 GQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+EAL +F M E A L + T GV+ AC SG S+ +E + + G+
Sbjct: 379 EYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK-KEAIHGFVVKRGLDRDRF 437
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
++DM R G+++ A + M + + V W T++
Sbjct: 438 VQNALMDMYSRLGKIDIAKRIFGKMEDR-DLVTWNTII 474
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 13/269 (4%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
W ++ + +A+ + M GI F +L A+ + G+ +H V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 263 KMGYD-SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
K GY V V N L+++Y K G ++F+ + E++ SWNS+++ + L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLA---ALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
F ML +P T +V ACS+ L+ G+Q+H Y GL K +
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAY----GLRKGEL-----N 231
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
F+ N L+ MY K G + ++++ +D+ +WN ++ + Q EAL+ M
Sbjct: 232 SFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVL 291
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++PD T VL ACSH L G+E
Sbjct: 292 EGVEPDGFTISSVLPACSHLEMLRTGKEL 320
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/596 (34%), Positives = 356/596 (59%), Gaps = 14/596 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F+L++ I +C + +G++IH Y+++ G S +L++MY+K ++ A V
Sbjct: 112 FSLSSMI---NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSV 168
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ ++ +P++ ++NA+I+G +++ + L+ M + G+ P+ +T +K C MA
Sbjct: 169 FDEIA-KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAG-MA 226
Query: 150 VLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E+ +++H + K+ + D ++G L++ Y KC M++A VF+ +P RD++ WNA+++
Sbjct: 227 LRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVIS 286
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G++Q E +A +F M EGI ++ T++ VL ++ + R +H + +K G++
Sbjct: 287 GHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF 346
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V+N+LID YGK V +A +FE D+ + S++T + Q G + LRL+ M
Sbjct: 347 DNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQ 406
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +PD S++L AC+ L+A G+Q+H +I+ G + D+F N+L++M
Sbjct: 407 DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGF--------MSDIFAGNSLVNM 458
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ DA F+++ + + SW+ MI G G GKEAL +F M + + P+ +T
Sbjct: 459 YAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITL 518
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V VL AC+H+G +++ + + M+ +G+ P EHY C+ID+LGRAG+L A EL MP
Sbjct: 519 VSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP 578
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+AN +VW LL A+R+H N DL E AA+ + LEP G +VL++NIY + G +++V
Sbjct: 579 FQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVAR 638
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+ V+K PG SW+E+KD ++TFI DRSH + IYA+L L+ L++ G
Sbjct: 639 VRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAG 694
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/489 (28%), Positives = 249/489 (50%), Gaps = 11/489 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G+++H ++ TG SL+ +Y+KC A +F+ + + +
Sbjct: 17 LKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP-DRS 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NA+ S + +D + + F+ M G+ P++++ +I C + ++ +KIHG
Sbjct: 76 VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KLG D D + +ALV+ Y K +E+A VF+E+ D+V WNA++ G H+
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+ R M+K G+ + FT++ L A M + GR +H ++KM S + LID
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +F++M E+D+ +WN++++ H Q + LF M + G + T
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
STVL + + L A RQIH + +G D ++ N+L+D Y KCG + DA
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEF--------DNYVVNSLIDTYGKCGHVEDA 367
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF + D+ + ++ Y DGQG+EAL ++ M + +KPD +L+AC+
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
QG++ + + ++G + I +++M + G + +A A + V W
Sbjct: 428 SAYEQGKQ-VHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDA-SCAFSRIPVRGIVSWSA 485
Query: 519 LLAASRLHG 527
++ HG
Sbjct: 486 MIGGLAQHG 494
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 203/405 (50%), Gaps = 42/405 (10%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M LG+ +++ FP ++K C ++ K++HG+V G D D ++ ++LV Y KC
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+A +F+ +P R VV WNA+ + Y +A+ +F M GI + F+++ +++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ GR +HG ++K+GYDS NAL+DMY K + +A +F+ + + DI SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 305 NSIMT---VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
N+I+ +HE H L L M +G P++ T S+ L AC+ +A GRQ+H
Sbjct: 181 NAIIAGCVLHEY---HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSS 237
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ + D F+ L+DMY+KC SM DA++VF M ++D+ +WN +I G+
Sbjct: 238 LIKMDMGS--------DSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHS 289
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-----------HSGFLSQGREFLPL 470
+ + +EA +F M + ++ T VL + + H+ L G EF
Sbjct: 290 QNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEF--- 346
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
Y V +ID G+ G + +A + E +P+V
Sbjct: 347 --DNYVV-------NSLIDTYGKCGHVEDATRVF-----EESPIV 377
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 353/586 (60%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + G+ +H++++++G + ++S + MY+KC + A+ +F+ + E +
Sbjct: 113 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-ERD 171
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N +IS +Y + K L+ F M+ G PD T +I C ++ + K+IH
Sbjct: 172 VASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHM 231
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G LD ++ SALV+ Y KC +E A +VFE++ ++VV WN+M+ GY+ G+
Sbjct: 232 ELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKS 291
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+E+FRRM +EGI + T++ +L A + G+ +HG +++ ++ + V ++LID
Sbjct: 292 CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLID 351
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K +G A +F+ M + ++ SWN +++ + + G++ L +F M AG +PD +T
Sbjct: 352 LYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 411
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F++VLPACS LA L G++IH +I+ + L +I++V M AL+DMY KCG++ +A
Sbjct: 412 FTSVLPACSQLAVLEKGKEIHNFIIESKL-------EINEVVM-GALLDMYAKCGAVDEA 463
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F ++ ++D SW MI YG GQ EAL +F M ++ KPD+VTF+ +LSACSH+
Sbjct: 464 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 523
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWR 517
G + +G + M + YG P +EHY+C+ID+LGR G+L EAYE+ P+ V +
Sbjct: 524 GLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLS 583
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TL +A LH DL E + + + +P Y+++SN+Y + K++EV +R +++
Sbjct: 584 TLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELG 643
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++KNPGCSWIE+ +H F+ D+SHP+A IY + L + + ++
Sbjct: 644 LKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKY 689
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 271/493 (54%), Gaps = 13/493 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L++G+ IH ++ G+ ++ SLIN+Y C + A VF + +
Sbjct: 10 LKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +N +++ N +GL+ F+ + L PD +T+P ++K C + V K +H
Sbjct: 70 ITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K G +DV + S+ V Y KC E+A+K+F+E+P RDV WN +++ Y Q G+
Sbjct: 130 THVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPE 189
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KALE+F M G T+T V+S+ + + G+ +H +V+ G+ V +AL+
Sbjct: 190 KALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALV 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMYGK C+ A E+FE ++ K++ SWNS++ + G+ + LF RM G +P L
Sbjct: 250 DMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLT 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S++L ACS L G+ IHGYI+ N + D+F+N++L+D+Y KCG++
Sbjct: 310 TLSSILMACSRSVNLQLGKFIHGYIIRNRVEA--------DIFVNSSLIDLYFKCGNIGS 361
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF M K +V SWN+MI GY G EAL +F+ M +A +KPD +TF VL ACS
Sbjct: 362 AENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQ 421
Query: 458 SGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L +G+E ++ES+ + + ++DM + G ++EA + +P E + V W
Sbjct: 422 LAVLEKGKEIHNFIIESKLEINEVV--MGALLDMYAKCGAVDEALHIFNQLP-ERDFVSW 478
Query: 517 RTLLAASRLHGNT 529
+++AA HG
Sbjct: 479 TSMIAAYGSHGQA 491
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 196/374 (52%), Gaps = 11/374 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL T I+S CA +L++G+EIH ++R+G ++L++MY KC ++ A VF
Sbjct: 209 TLTTVISS---CARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVF 265
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ NV ++N+MI+G+ + ++ F M + G+ P T ++ C + +
Sbjct: 266 EQIQ-RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNL 324
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K IHG + + ++ D+++ S+L++ Y KC + A VF+ +P +VV WN M++GY
Sbjct: 325 QLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGY 384
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++G + +AL +F M K G+ T T VL A + + G+ +H +++ +
Sbjct: 385 VKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINE 444
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
VM AL+DMY K V EAL IF + E+D SW S++ + G L+LF++M +
Sbjct: 445 VVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQS 504
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD VTF +L ACSH + G Y +A+ G ++ + L+D+
Sbjct: 505 DAKPDKVTFLAILSACSHAGLVDEG----CYYFNQMIAEYGFKPAVEHY---SCLIDLLG 557
Query: 391 KCGSMRDAQMVFTK 404
+ G +R+A + +
Sbjct: 558 RVGRLREAYEILQR 571
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 156/300 (52%), Gaps = 14/300 (4%)
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
M + +L I + K G+++H +V +G + + + +LI++Y A +
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 293 FEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF-QPDLVTFSTVLPACSHLA 350
F+ +E DI WN +M + L +F R+L + +PD T+ +VL ACS L
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ +G+ +H +++ +G A +D V M++A+ MY KC DA +F +M ++DV
Sbjct: 121 RVGYGKMVHTHVIKSGFA-------MDVVVMSSAV-GMYAKCNVFEDAIKLFDEMPERDV 172
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LP 469
ASWN +I Y DGQ ++AL++F M + KPD VT V+S+C+ L +G+E +
Sbjct: 173 ASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHME 232
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
L+ S + + + + ++DM G+ G L A E+ N V W +++A L G++
Sbjct: 233 LVRSGFALDGFVS--SALVDMYGKCGCLEMAKEV-FEQIQRKNVVSWNSMIAGYSLKGDS 289
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/625 (33%), Positives = 348/625 (55%), Gaps = 21/625 (3%)
Query: 1 MLSKISRINPFSSCFN-----FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIH 55
M+ +++ + +CF + + PF + + C NLQ G+ IH
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVI-------RACRDLKNLQMGRLIH 53
Query: 56 SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
+ + G+ +L++MY KC +++ A F+F+ + E ++ T+ MI G+ A
Sbjct: 54 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIGGYAECGKA 112
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L F MR+ GV+PDK ++ C + A+ + + I + + LDV +G+A+
Sbjct: 113 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 172
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ Y KC +E A ++F+ + ++V+ W+AM+ Y G+ KAL++FR M G+ +
Sbjct: 173 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDK 232
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ +L A + + GR++H IV K G D V AL+DMYGK + + +A +F+
Sbjct: 233 ITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDK 292
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M E+D+ +W ++ + +CGN + +L LFD+M G PD V TV+ AC+ L A+
Sbjct: 293 MPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKA 352
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
R I YI DV + A++DM+ KCG + A+ +F +M +K+V SW+
Sbjct: 353 RTIDDYIQRKKFQL--------DVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSA 404
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
MI YG GQG++ALD+F M + + P+++T V +L ACSH+G + +G F LM Y
Sbjct: 405 MIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDY 464
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
V ++HYTCV+D+LGRAG+L+EA +L +M E + +W L A R H + LAE A
Sbjct: 465 SVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKA 524
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A + +L+P + G+Y+L+SNIY G++E+V R M Q+ ++K PG +WIE+ + H
Sbjct: 525 ATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQ 584
Query: 596 FISSDRSHPEAKSIYAELHSLTARL 620
F D +HP +K IY L SL +L
Sbjct: 585 FSVGDTTHPRSKEIYEMLKSLGNKL 609
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/596 (34%), Positives = 338/596 (56%), Gaps = 12/596 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
C++S+ C+ +L G+EIH ++++G+ ++SLI MY KC +K A +FN+
Sbjct: 212 VACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNS 271
Query: 93 L----SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+ S N +N MISG+ SN + L F M G+ PD T L C + +
Sbjct: 272 ILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESL 331
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+IHGL+FK GL ++ + +AL++ YLKC M LK+F ++++W+A+++
Sbjct: 332 DIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVIS 391
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
AQ G KALE+F E + VL A + G +HG+ KMG+ S
Sbjct: 392 NCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVS 451
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V +AL+D+Y K + +G + ++F + +KD+ SWN++++ + Q D L+ F M
Sbjct: 452 DVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQ 511
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P+ VT + +L C+HL+ + +++HGY++ GL V ++N+L+
Sbjct: 512 LEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGST--------VLVSNSLIAT 563
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + + F KM +++ SWN +ILG GM + E + +F M + +KPD VTF
Sbjct: 564 YAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTF 623
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+LSACSH+G + +G ++ M + + P +E YTC++D+LGRAG LN+AY+L +AMP
Sbjct: 624 TAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMP 683
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ +W +LL + + HG+ LAEI A +F+L P G VL++N+Y GK E
Sbjct: 684 CTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSK 743
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R ++ ++K PGCSWIE+ + H FI+ DRSH ++ IYA + SLT ++ G
Sbjct: 744 VRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAG 799
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 246/524 (46%), Gaps = 41/524 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL---SC 95
L L Q NLQ + ++ I+ SP+S C +++ F +N + S
Sbjct: 12 LPLYPDQFNLQTPSKTPHHISNLVIVTSPVS-----------CSLRFQKFNYNPIQKWSS 60
Query: 96 EP---------NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT-FPCLIKCCC 145
+P +V N +I + + F + + M GV +++ FPCLIK
Sbjct: 61 KPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFG 120
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ V + ++IHG V KLG+ DV + ++L+ Y KC +E+A+++FE++P D+V WN
Sbjct: 121 GLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNT 180
Query: 206 MVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M++G+ + ++ ++L FR M E GI+ +R + + + +GR +HG+VVK
Sbjct: 181 MISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKS 240
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-----WNSIMTVHEQCGNHDG 319
G D ++++LI+MY K + A IF + +KD WN +++ + G
Sbjct: 241 GLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQ 300
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF +M+ G +PD T ++ CS + G+QIHG I GL N +
Sbjct: 301 ALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNN--------I 352
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ AL+DMY KCG M +F + ++ W+ +I G +AL++F
Sbjct: 353 RVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKME 412
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
D V VL ACS +G + L ++ G V + + ++D+ + +
Sbjct: 413 DGLADSGILVAVLRACSSLTLKPEGMQIHGL-ATKMGFVSDVFVGSALVDLYAKCRDMGY 471
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ ++ L + ++ + V W L++ D A + A R QLE
Sbjct: 472 SKKVFLRL-SQKDLVSWNALISGYAQDECADEA-LKAFRDMQLE 513
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 339/595 (56%), Gaps = 12/595 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL+T L+ CA+ +L++G+ +H+ LR+G SL++MYSKC + AL V
Sbjct: 52 FTLSTV---LKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKV 108
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + P+V ++AMI+G + + F+ MR+ G P+++T L+ ++
Sbjct: 109 FTKIR-NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD 167
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + IHG + K G + D + + L+ Y+K + +E+ KVFE + D+V WNA+++G
Sbjct: 168 LRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSG 227
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ + +F +M EG + FT VL + + + G+ VH ++K D
Sbjct: 228 FYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDD 287
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V AL+DMY K +C+ +A F+ + +DIFSW I++ + Q + ++ F +M
Sbjct: 288 DFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQR 347
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P+ T ++ L CSH+A L +GRQ+H V G D+F+ +AL+D+Y
Sbjct: 348 EGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAG--------HFGDIFVGSALVDLY 399
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG M A+ +F + +D+ SWN +I GY GQG++AL+ F M + PDE TF+
Sbjct: 400 GKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFI 459
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSACS G + +G++ M YG+ P+IEHY C++D+LGRAG+ NE M
Sbjct: 460 GVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNL 519
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
++W T+L A +LHGN D E AA+++F++EP +Y+L+SNI+ + G++++V +I
Sbjct: 520 TPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNI 579
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M + ++K PGCSW+E+ +H F+S D SHP+ + IYA+L L L G
Sbjct: 580 RALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIG 634
Score = 241 bits (616), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 236/440 (53%), Gaps = 16/440 (3%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E N ++NA+++G+ K L F M++ K+T ++K C + ++ E K
Sbjct: 13 EKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKV 72
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H L + G ++D ++G +LV+ Y KC + +ALKVF ++ DVV W+AM+ G Q G
Sbjct: 73 LHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGH 132
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A E+F M ++G ++FT++ ++S MG + G+ +HG + K G++S V N
Sbjct: 133 GQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNP 192
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFDRMLSAGF 332
LI MY K +CV + ++FE M D+ SWN++++ + CG R+F +ML GF
Sbjct: 193 LIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGP---RIFYQMLLEGF 249
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P++ TF +VL +CS L G+Q+H +I+ N DD F+ AL+DMY K
Sbjct: 250 KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNS--------SDDDDFVGTALVDMYAKA 301
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+ DA + F ++ +D+ SW ++I GY Q ++A+ F M +KP+E T L
Sbjct: 302 RCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCL 361
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S CSH L GR+ L + + G I + ++D+ G+ G + A + + + +
Sbjct: 362 SGCSHMATLENGRQ-LHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISR-D 419
Query: 513 PVVWRTLLAASRLHGNTDLA 532
V W T+++ HG + A
Sbjct: 420 IVSWNTIISGYSQHGQGEKA 439
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 143/272 (52%), Gaps = 8/272 (2%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
ME A ++F +P ++ V WNA++NGYAQ+G+ K L++F +M + S+FT++ VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
G + G+V+H + ++ G + + +L+DMY K V +AL++F + D+ +W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
++++T +Q G+ LF M G +P+ T S+++ +++ L +G+ IHG I
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G D ++N L+ MY K + D VF M+ D+ SWN ++ G+
Sbjct: 181 YGFE--------SDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQ 232
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+F M KP+ TF+ VL +CS
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCS 264
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M A+ +F M +K+ SWN ++ GY G GK+ L +F M E + K + T VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTC-VIDMLGRAGQLNEAYELALAMPNEANP 513
C+++G L +G+ L + R G E C ++DM + G + +A ++ + N +
Sbjct: 61 CANTGSLREGK-VLHALALRSG-CEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRN-PDV 117
Query: 514 VVWRTLLAASRLHGN 528
V W ++ G+
Sbjct: 118 VAWSAMITGLDQQGH 132
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 331/589 (56%), Gaps = 17/589 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C NL +G+EIH +++R G + +LI MY KC + A VF+ +
Sbjct: 214 LRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDR 273
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ N +GL F M + V PD T +I C + ++IHG
Sbjct: 274 I-SWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + D I ++L+ Y +EEA VF RD+V W AM++GY K
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE ++ M EGI T+ VLSA + G +H + + G S V N+LID
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSI---MTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
MY K KC+ +ALEIF EK+I SW SI + ++ +C L F M+ +P+
Sbjct: 453 MYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFE---ALFFFREMIRR-LKPN 508
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT VL AC+ + AL G++IH + + G++ +G FM NA++DMY +CG M
Sbjct: 509 SVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDG--------FMPNAILDMYVRCGRM 560
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A F + +V SWNI++ GY G+G A ++F M E+ + P+EVTF+ +L AC
Sbjct: 561 EYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCAC 619
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S SG +++G E+ M+ +Y ++P ++HY CV+D+LGR+G+L EAYE MP + +P V
Sbjct: 620 SRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAV 679
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL + R+H + +L E+AA+ +FQ + G Y+L+SN+Y GK+++V ++R MRQ
Sbjct: 680 WGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQ 739
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +PGCSW+E+K +H F+SSD HP+ K I A L +++E G
Sbjct: 740 NGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAG 788
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 177/624 (28%), Positives = 306/624 (49%), Gaps = 38/624 (6%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNN 92
+A ++LC + ++G ++SY+ I S LS+ +L++M+ + + A +VF
Sbjct: 110 VALIRLCEWKRARKEGSRVYSYV---SISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGR 166
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + N+F++N ++ G+ + LD ++ M +GV PD YTFPC+++ C + ++
Sbjct: 167 ME-KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVR 225
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++IH V + G + DV + +AL+ Y+KC + A VF+++P RD + WNAM++GY +
Sbjct: 226 GREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFE 285
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + L +F M K + T+T V++A ++G + GR +HG V++ + +
Sbjct: 286 NGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI 345
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LI MY + EA +F E +D+ SW ++++ +E C L + M + G
Sbjct: 346 HNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGI 405
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD +T + VL ACS L L G +H GL + + N+L+DMY KC
Sbjct: 406 MPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL--------VSYSIVANSLIDMYAKC 457
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+ A +F +K++ SW +ILG ++ + EAL F M +LKP+ VT V VL
Sbjct: 458 KCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIR-RLKPNSVTLVCVL 516
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC+ G L+ G+E + R GV ++DM R G++ A++ ++ +E
Sbjct: 517 SACARIGALTCGKE-IHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHEVT 575
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDI 569
W LL G A QR+ +E N V +I A G E L+
Sbjct: 576 S--WNILLTGYAERGKGAHATELFQRM--VESNVSPNEVTFISILCACSRSGMVAEGLEY 631
Query: 570 RHTMRQQ-----NVRKNPGCSWIELKDG----LHTFISSDRSHPEAKSIYAELHSLTARL 620
++M+ + N++ + + G + FI P+ A L+S R+
Sbjct: 632 FNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNS--CRI 689
Query: 621 REH---GDCCAGTLFDSDSTASGF 641
H G+ A +F D+T+ G+
Sbjct: 690 HHHVELGELAAENIFQDDTTSVGY 713
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 210/410 (51%), Gaps = 10/410 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + + + M +L + + + LI+ C A E +++ V L + +G+AL+
Sbjct: 89 RAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALL 148
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ +++ + +A VF + R++ WN +V GYA+ G F +AL+++ RM G+ +
Sbjct: 149 SMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVY 208
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T VL M GR +H V++ G++S V V+NALI MY K V A +F+ M
Sbjct: 209 TFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKM 268
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D SWN++++ + + G LRLF M+ PDL+T ++V+ AC L GR
Sbjct: 269 PNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
QIHGY++ ++ S ++N+L+ MY+ G + +A+ VF++ +D+ SW M
Sbjct: 329 QIHGYVLRTEFGRDPS--------IHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAM 380
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I GY ++AL+ + M + PDE+T VLSACS L G + + + G
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQK-G 439
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+V +IDM + +++A E+ E N V W +++ R++
Sbjct: 440 LVSYSIVANSLIDMYAKCKCIDKALEI-FHSTLEKNIVSWTSIILGLRIN 488
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + + C + + G++IH Y+LRT P SLI MYS ++ A VF+
Sbjct: 308 LMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFS 367
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
C ++ ++ AMISG+ + K L+ + M G++PD+ T ++ C + +
Sbjct: 368 RTECR-DLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLD 426
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+H + + GL + ++L++ Y KC+ +++AL++F +++V W +++ G
Sbjct: 427 MGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLR 486
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--YDSG 269
+AL FR M + + + T+ VLSA +G G+ +H ++ G +D
Sbjct: 487 INNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGF 545
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+P NA++DMY + + A + F ++ ++ SWN ++T + + G LF RM+
Sbjct: 546 MP--NAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVE 602
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ P+ VTF ++L ACS + G + + Y ++ L K+ +C
Sbjct: 603 SNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNL-KHYAC----------- 650
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G + +A KM K D A W ++
Sbjct: 651 VVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 95/190 (50%), Gaps = 9/190 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G+EIH++ LRTG+ ++++MY +C +M+YA F
Sbjct: 511 TLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF--F 568
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE- 152
S + V ++N +++G+ + F M + V P++ TF ++ C V E
Sbjct: 569 SVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEG 628
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG-- 209
++ + + +K + ++ + +V+ + +EEA + +++P++ D +W A++N
Sbjct: 629 LEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCR 688
Query: 210 ---YAQIGEF 216
+ ++GE
Sbjct: 689 IHHHVELGEL 698
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 338/594 (56%), Gaps = 12/594 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+A+ +A+ C+ +L+KG+++HSY+L+ G+ + SL+++Y K ++ AL +F
Sbjct: 246 TIASLLAA---CSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIF 302
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
++ NV +N M+ + D K D F M GV P+K+T+PC+++ C +
Sbjct: 303 DS-GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH L K G D+Y+ L++ Y K ++++A ++ + + +DVV W +M+ GY
Sbjct: 362 GLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGY 421
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q +ALE F+ M GIW + +SA + G +H V GY + V
Sbjct: 422 VQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADV 481
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ N L+ +Y + EA FE +E K+ +WN +++ Q G ++ L++F +M A
Sbjct: 482 SIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQA 541
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + ++ TF + + A ++LA + G+QIH ++ G + ++NAL+ +Y
Sbjct: 542 GAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYT--------SETEISNALISLYG 593
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ DA+M F +M+K++ SWN +I G+G EALD+F M + LKP +VTFVG
Sbjct: 594 KCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVG 653
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL+ACSH G + +G + M + +G+ P +HY CV+D+LGRAGQL+ A MP
Sbjct: 654 VLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIP 713
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +VWRTLL+A ++H N ++ E AA+ + +LEP +YVL+SN Y GK+ IR
Sbjct: 714 ADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIR 773
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ + VRK PG SWIE+K+ +H F DR HP A IY L L RL + G
Sbjct: 774 KIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIG 827
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 248/501 (49%), Gaps = 16/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ L++ +++ C Q G+ IH + + G +LI++Y +C + A
Sbjct: 143 PYVLSSILSA---CTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADR 199
Query: 89 VF-NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + L C+ T+N +ISG + L F+ M+ G+ PD T L+ C V
Sbjct: 200 VFCDMLYCDS--VTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + K++H + K G+ LD + +L++ Y+K +EEAL++F+ +VVLWN M+
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Y QI + K+ ++F RM G+ ++FT +L G G +H + +K G+
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V LIDMY K + +A I +M+EEKD+ SW S++ + Q L F M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G PD + ++ + AC+ + A+ G QIH + V+G + DV + N L+
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA--------DVSIWNGLVY 489
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y +CG ++A F + K+ +WN +I G+ G +EAL +F M +A K + T
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFT 549
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FV +SA ++ + QG++ + + G E +I + G+ G + +A ++
Sbjct: 550 FVSSISASANLADIKQGKQIHARV-IKTGYTSETEISNALISLYGKCGSIEDA-KMDFFE 607
Query: 508 PNEANPVVWRTLLAASRLHGN 528
+ N V W T++ HG
Sbjct: 608 MTKRNEVSWNTIITCCSQHGR 628
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 232/470 (49%), Gaps = 11/470 (2%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
EIH+ + G+ + LI++Y+K ++ A VF LS NV ++ A++SG+ N
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNV-SWVAVLSGYAQN 121
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ + + M + GV+P Y ++ C + IH V+K G + ++G
Sbjct: 122 GLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG 181
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL++ YL+C+ A +VF ++ D V +N +++G+AQ G +AL +F M G+
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLS 241
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ +L+A +G + G+ +H ++K G + +L+D+Y K + EAL+I
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQI 301
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ + ++ WN ++ + Q + + +F RML+AG +P+ T+ +L C+H +
Sbjct: 302 FDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G QIH + NG D++++ L+DMY+K G + AQ + + +KDV S
Sbjct: 362 GLGEQIHSLTIKNGFQ--------SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVS 413
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W MI GY KEAL+ F M + PD + +SAC+ + QG + +
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G + + ++ + R G EA+ A+ ++ + W L++
Sbjct: 474 VS-GYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEG-ITWNGLISG 521
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 222/428 (51%), Gaps = 13/428 (3%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHG 158
++N ++GF + D K L F RQ VL F C ++ C V +IH
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVL-GAVDFACALRACRGSGRRWPLVPEIHA 66
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
GL IG+ L++ Y K F+ A +VFEEL +RD V W A+++GYAQ G +
Sbjct: 67 KAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEE 126
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ ++R M + G+ + + ++ +LSA F+ GR++H V K G+ S V NALI
Sbjct: 127 AVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALIS 186
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y + + A +F M D ++N++++ H QCG+ D L +FD M +G PD VT
Sbjct: 187 LYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVT 246
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+++L ACS + L G+Q+H Y++ G++ D M +L+D+Y K G + +A
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSL--------DYIMEGSLLDLYVKSGDIEEA 298
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F + +V WN+M++ YG ++ D+F M A ++P++ T+ +L C+H+
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G + L + G + +IDM + G L++A + L M E + V W +
Sbjct: 359 GEIGLGEQIHSLT-IKNGFQSDMYVSGVLIDMYSKYGWLDKAQRI-LDMIEEKDVVSWTS 416
Query: 519 LLAASRLH 526
++A H
Sbjct: 417 MIAGYVQH 424
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/595 (34%), Positives = 346/595 (58%), Gaps = 39/595 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F+L++ + + C + +G+ IH Y+++ G P S +L++MY+K + A+ V
Sbjct: 259 FSLSSMVNA---CTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + +P++ ++NA+I+G ++ + L+ M+
Sbjct: 316 FEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMK----------------------- 351
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+++H + K+ ++ D+++ LV+ Y KC +E+A F LP +D++ WNA+++G
Sbjct: 352 ----RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 407
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+Q E +AL +F M KEGI ++ T++ +L + + R VHG+ VK G+ S
Sbjct: 408 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 467
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V+N+LID YGK V +A IFE D+ S+ S++T + Q G + L+LF M
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+PD S++L AC++L+A G+Q+H +I+ G + D+F N+L++MY
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGF--------VLDIFAGNSLVNMY 579
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ DA F++++++ + SW+ MI G G G++AL +F+ M + + P+ +T V
Sbjct: 580 AKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLV 639
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL AC+H+G +++ + + ME +G P EHY C+ID+LGRAG++NEA EL MP
Sbjct: 640 SVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPF 699
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
EAN VW LL A+R+H + +L AA+ +F LEP G +VL++NIY + GK+E V ++
Sbjct: 700 EANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEV 759
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R MR V+K PG SWIE+KD ++TF+ DRSH ++ IYA+L L+ + + G
Sbjct: 760 RRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAG 814
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 223/421 (52%), Gaps = 42/421 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C +L+ G +IH+++ ++G+ D P LIN+YSKC YA + + S EP+
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDE-SSEPD 121
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +++A+ISG+ N L F+ M LGV +++TF ++K C V + K++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+V G + DV++ + LV Y KC ++ ++F+E+P R+VV WNA+ + Y Q +
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F M GI + F+++ +++A + G+++HG ++K+GYD NAL+D
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIM---TVHEQCGNHDGTLRLFDRMLSAGFQPD 335
MY K + +A+ +FE +++ DI SWN+++ +HE +H+ L L +M
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHE---HHEQALELLGQM-------- 350
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
RQ+H ++ + D+F++ L+DMY+KC +
Sbjct: 351 -------------------KRQLHSSLMKMDMES--------DLFVSVGLVDMYSKCDLL 383
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA+M F + +KD+ +WN +I GY + EAL +F M + + ++ T +L +
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443
Query: 456 S 456
+
Sbjct: 444 A 444
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 241/490 (49%), Gaps = 38/490 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +L+ G+++H ++ +G +L+ MY+KC + + +F+ + E N
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP-ERN 222
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NA+ S + DF + + F M G+ P++++ ++ C + K IHG
Sbjct: 223 VVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KLG D D + +ALV+ Y K + +A+ VFE++ D+V WNA++ G +
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+ +M ++ +H ++KM +S + V L+D
Sbjct: 343 ALELLGQMKRQ---------------------------LHSSLMKMDMESDLFVSVGLVD 375
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A F ++ EKD+ +WN+I++ + Q L LF M G + T
Sbjct: 376 MYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 435
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
ST+L + + L + RQ+HG V +G D+++ N+L+D Y KC + DA
Sbjct: 436 LSTILKSTAGLQVVHVCRQVHGLSVKSGFHS--------DIYVVNSLIDSYGKCSHVEDA 487
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F + + D+ S+ MI Y GQG+EAL +F M + +LKPD +L+AC++
Sbjct: 488 ERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANL 547
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
QG++ L + +YG V I +++M + G +++A A + E V W
Sbjct: 548 SAFEQGKQ-LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR-AFSELTERGIVSWSA 605
Query: 519 LLAASRLHGN 528
++ HG+
Sbjct: 606 MIGGLAQHGH 615
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 178/354 (50%), Gaps = 22/354 (6%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P ++ L+ CC ++ +IH + K GL D I + L+N Y KC+ A K+
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
+E D+V W+A+++GYAQ G AL F M G+ + FT + VL A ++
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDL 173
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ G+ VHG+VV G++ V V N L+ MY K ++ +F+ + E+++ SWN++ + +
Sbjct: 174 RIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCY 233
Query: 312 EQ---CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q CG G LF M+ +G +P+ + S+++ AC+ L G+ IHGY++ G
Sbjct: 234 VQXDFCGEAVG---LFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
D F NAL+DMY K G + DA VF K+ + D+ SWN +I G + ++
Sbjct: 291 W--------DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342
Query: 429 ALDMF--------SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
AL++ S + + ++ D VG++ S L R L+ +
Sbjct: 343 ALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK 396
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Q E + + + K + + + +LS + G +H + K G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ N LI++Y K + G A ++ + E D+ SW+++++ + Q G G L F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G + + TFS+VL ACS + L G+Q+HG +VV+G DVF+ N L
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE--------GDVFVANTL 198
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY KC D++ +F ++ +++V SWN + Y EA+ +F M + +KP+E
Sbjct: 199 VVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNE 258
Query: 446 VTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ +++AC+ S+G+ L++ Y P ++DM + G L +A +
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF--SANALVDMYAKVGDLADAISV- 315
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLA-EIAAQRVFQL 542
+ + V W ++A LH + + A E+ Q QL
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQL 354
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/608 (36%), Positives = 349/608 (57%), Gaps = 19/608 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS--KCCQMKYALFV 89
L C+ SL+ C T + + ++IH+ MLRT + P S + ++ + + YA V
Sbjct: 40 LHPCLLSLEKC---TTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLV 96
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN + P FT N++I G+ + + + + F+ M G+ PD++TFP L K C
Sbjct: 97 FNQIP-NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---V 152
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ E K++H KLG D YI + L+N Y C + A KVF+++ + VV W M+
Sbjct: 153 LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGA 212
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ H+A+++FRRM + + T+ VL+A + + VH + + G
Sbjct: 213 YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFH 272
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +AL+D+Y K C A ++F M EK++F WN ++ H + +++ L LF+ M
Sbjct: 273 TVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G + D VT +++L AC+HL AL G+ +H YI + DV + AL+DMY
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEV--------DVALGTALVDMY 384
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ A VF +M +KDV +W +I+G M GQG +AL++F M +++KPD +TFV
Sbjct: 385 AKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFV 444
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL+ACSH+G +++G + M ++YG+ P+IEHY C++DMLGRAG++ EA +L MP
Sbjct: 445 GVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 504
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ V LL+A R+HGN +AE AAQ++ +L+P + G YVL+SNIY + +E +
Sbjct: 505 APDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKM 564
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC-- 627
R M ++N++K PGCS IE+ +H F+ D SHP++ IY L + RL+ G
Sbjct: 565 RELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDK 624
Query: 628 AGTLFDSD 635
+ LFD D
Sbjct: 625 SEVLFDMD 632
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 349/599 (58%), Gaps = 10/599 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A+LQ C + +++G IH+ +L++ + +LI MY++ +M A +F N+
Sbjct: 284 TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNM 343
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + ++N+M+SGF N + L F++ MR G PD +I L
Sbjct: 344 D-DWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHG 402
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+IH K GLD D+ +G++LV+ Y K M+ +F+++P +DVV W ++ G+AQ
Sbjct: 403 MQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQN 462
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +ALE+FR + EGI + ++ +L A + + + +H +++ G S + +
Sbjct: 463 GSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQ 521
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N ++D+YG+ V A +FE++E KD+ SW S+++ + G + L LF M G +
Sbjct: 522 NGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVE 581
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD ++ ++L A + L+AL G++IHG+++ G GS + + L+DMY +CG
Sbjct: 582 PDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGS--------LASTLVDMYARCG 633
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ ++ VF + KD+ W MI YGM G G+ A+D+F M + + PD + FV VL
Sbjct: 634 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 693
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG +++GR FL M+ Y + P EHY C++D+LGRA L EAY+ M E
Sbjct: 694 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTA 753
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL A ++H N +L EIAAQ++ +++P + GNYVL+SN+Y A ++++V +R M
Sbjct: 754 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRM 813
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
+ ++KNPGCSWIE+ + +HTF++ D+SHP++ IY++L +T +L + G A T F
Sbjct: 814 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKF 872
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 256/499 (51%), Gaps = 11/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T L+ C + + G E+H ++ G + S++ MY+KC + A
Sbjct: 177 PLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQ 236
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +V ++N+MIS + SN + + L F M++ + P+ YTF ++ C D
Sbjct: 237 LFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSS 296
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + IH V K ++V++ +AL+ Y + M EA +F + D + WN+M++
Sbjct: 297 FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 356
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ Q G +H+AL+ + M G V +++A G +G +H +K G DS
Sbjct: 357 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDS 416
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+L+DMY K + IF+ M +KD+ SW +I+ H Q G+H L LF +
Sbjct: 417 DLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQ 476
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G D++ S++L ACS L + ++IH YI+ GL+ D+ + N ++D+
Sbjct: 477 LEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS---------DLVLQNGIVDV 527
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG++ A +F + KDV SW MI Y +G EAL++F M E ++PD ++
Sbjct: 528 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 587
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +LSA + L +G+E + R G V + ++DM R G L ++ + +
Sbjct: 588 VSILSAAASLSALKKGKEIHGFL-IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR 646
Query: 509 NEANPVVWRTLLAASRLHG 527
N+ + V+W +++ A +HG
Sbjct: 647 NK-DLVLWTSMINAYGMHG 664
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 151/495 (30%), Positives = 253/495 (51%), Gaps = 15/495 (3%)
Query: 30 FTLATCIAS-LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYAL 87
F+L +S L+LC + L +GQ++H++M+ + + +S T L+ MY KC + A
Sbjct: 75 FSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAE 134
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +FT+NAMI + +N L+ + MR G+ D TFPC++K C +
Sbjct: 135 KLFDGMP-HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLL 193
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
++HGL K G V++ +++V Y KC + A ++F+ +P + DVV WN+M
Sbjct: 194 KDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSM 253
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ Y+ G+ +AL +F M K + + +T L A F K G +H V+K Y
Sbjct: 254 ISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSY 313
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
V V NALI MY + +GEA IF M++ D SWNS+++ Q G + L+ +
Sbjct: 314 YINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHE 373
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M AG +PDLV +++ A + +HG QIH Y + NGL D+ + N+L+
Sbjct: 374 MRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLD--------SDLQVGNSLV 425
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY K SM+ +F KM KDV SW +I G+ +G AL++F + + D +
Sbjct: 426 DMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVM 485
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
+L ACS +S +E + R G+ + ++D+ G G ++ A +
Sbjct: 486 MISSILLACSGLKLISSVKEIHSYI-IRKGLSDLVLQ-NGIVDVYGECGNVDYAARM-FE 542
Query: 507 MPNEANPVVWRTLLA 521
+ + V W ++++
Sbjct: 543 LIEFKDVVSWTSMIS 557
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 202/410 (49%), Gaps = 13/410 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHG-LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ +++ C A+ E +++H ++ L V++ + LV Y KC + +A K+F+
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P + + WNAM+ Y GE +LE++R M GI + T +L A ++ + G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQ 313
VHG+ +K GY S V V N+++ MY K + A ++F+ M EK D+ SWNS+++ +
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LRLF M A P+ TF L AC + + G IH ++ + N
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYIN--- 316
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
VF+ NAL+ MY + G M +A +F M D SWN M+ G+ +G EAL +
Sbjct: 317 -----VFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFY 371
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +A KPD V + +++A + SG G + + + G+ ++ ++DM +
Sbjct: 372 HEMRDAGQKPDLVAVISIIAASARSGNTLHGMQ-IHAYAMKNGLDSDLQVGNSLVDMYAK 430
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ + MP++ + V W T++A +G+ A + R QLE
Sbjct: 431 FCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGSHSRA-LELFREVQLE 478
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/631 (35%), Positives = 361/631 (57%), Gaps = 24/631 (3%)
Query: 1 MLSKISRINPFSSC---FNFSTSSGNQTFNHPFT-LATCIASLQLCAHQTNLQKGQEIHS 56
+++++++ FS F SSG + ++ F+ ++ +SL+ ++ G+++H
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR------SVNGGEQLHG 219
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF 116
Y+L++G + SL+ Y K ++ A VF+ ++ E +V ++N++I+G+ SN A
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAE 278
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
KGL F M G+ D T + C D + + +H K + + L+
Sbjct: 279 KGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLL 338
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y KC ++ A VF E+ R VV + +M+ GYA+ G +A+++F M +EGI +
Sbjct: 339 DMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
TVT VL+ G+ VH + + MG+D + V NAL+DMY K + EA +F
Sbjct: 399 TVTAVLNCCARNRLLDEGKRVHEWIKENDMGFD--IFVSNALMDMYAKCGSMREAELVFS 456
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALM 353
M KDI SWN+++ + + + L LF+ +L F PD T + VLPAC+ L+A
Sbjct: 457 EMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFD 516
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GR+IHGYI+ NG D + N+L+DMY KCG++ A+++F ++ KD+ SW
Sbjct: 517 KGREIHGYIMRNGY--------FSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSW 568
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+MI GYGM G GKEA+ +F+ M +A ++PDE++FV +L ACSHSG + +G F +M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ PT+EHY C++DML R G L++AY MP + +W LL R+H + LAE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A++VF+LEP + G YVLM+NIY K+EEV +R + Q+ +RKNPGCSWIE+K +
Sbjct: 689 RVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ F++ D S+PE + I A L + AR+ E G
Sbjct: 749 NIFVAGDSSNPETEKIEAFLRGVRARMIEEG 779
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/501 (32%), Positives = 249/501 (49%), Gaps = 17/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYAL 87
P TL + LQLCA +L+ G+E+ +++ G ++DS L + L MY+ C +K A
Sbjct: 94 PRTLCSV---LQLCADSKSLKDGKEVDNFIRGNGFVLDSNLG-SKLALMYTNCGDLKEAS 149
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + E +F M S DF+ + F M GV D YTF C+ K +
Sbjct: 150 RVFDQVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+V +++HG + K G +G++LV YLK ++ A KVF+E+ RDV+ WN+++
Sbjct: 209 RSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
NGY G K L VF +M GI + T+ V + GR VH VK +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
N L+DMY K + A +F M + + S+ S++ + + G ++LF+ M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD+ T + VL C+ L G+++H +I N + D+F++NALMD
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGF--------DIFVSNALMD 440
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS-CMCEAKLKPDEV 446
MY KCGSMR+A++VF++M KD+ SWN +I GY + EAL +F+ + E + PDE
Sbjct: 441 MYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDER 500
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VL AC+ +GRE + R G ++DM + G L A L
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANSLVDMYAKCGALLLA-RLLFD 558
Query: 507 MPNEANPVVWRTLLAASRLHG 527
+ V W ++A +HG
Sbjct: 559 DITSKDLVSWTVMIAGYGMHG 579
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 200/393 (50%), Gaps = 16/393 (4%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T +++ C D ++ + K++ + G LD +GS L Y C ++EA +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++ + + WN ++N A+ G+F ++ +F++M G+ M +T + V + +
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG ++K G+ V N+L+ Y K V A ++F+ M E+D+ SWNSI+ +
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G + L +F +ML +G + DL T +V C+ + GR +H + V +
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGV-------KA 325
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C +D F N L+DMY+KCG + A++VF +MS + V S+ MI GY +G EA+ +
Sbjct: 326 CFSREDRFC-NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR---EFLPLMESRYGVVPTIEHYTCVID 489
F M E + PD T VL+ C+ + L +G+ E++ + + + + ++D
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVS----NALMD 440
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
M + G + EA EL + + + W T++
Sbjct: 441 MYAKCGSMREA-ELVFSEMRVKDIISWNTVIGG 472
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/586 (36%), Positives = 335/586 (57%), Gaps = 36/586 (6%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
SLI++ +K + A +F ++ EP+ ++N+M+SGF +D + L++F M +
Sbjct: 85 NSLISVLTKSGFLDEAARLFGSMP-EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDF 143
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
L ++Y+F + C +M + ++H LV K DVY+GSAL++ Y KC + A +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF + R++V WN+++ Y Q G +ALEVF RM G+ T+ V+SA +
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 251 FKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME------------ 297
K G +H VVK + + + NAL+DMY K V EA +F+ M
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323
Query: 298 -------------------EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
++++ SWN+++ + Q G ++ LRLF + P T
Sbjct: 324 GYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT 383
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +L AC++LA L+ GRQ H +++ G + D+F+ N+L+DMY KCGS+ D
Sbjct: 384 FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAES--DIFVGNSLIDMYMKCGSIEDG 441
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF KM ++D SWN +I+GY +G G EAL +F M KPD VT +GVL ACSH+
Sbjct: 442 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 501
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +GR + ME +G++P +HYTC++D+LGRAG LNEA L AMP + VVW +
Sbjct: 502 GLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 560
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LLAA ++HGN ++ + AA+++ +++P + G YVL+SN+Y G++ +V+ +R MRQQ V
Sbjct: 561 LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGV 620
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PGCSWIE++ +H F+ D+SHP K IY+ L LT +++ G
Sbjct: 621 TKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVG 666
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 217/470 (46%), Gaps = 87/470 (18%)
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
LP+ F L+ C + + +H + ++++I + L++ Y KC +++A K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 191 VFEELPLR-------------------------------DVVLWNAMVNGYAQIGEFHKA 219
+F+ +P R D WN+MV+G+AQ F ++
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
LE F +M +E ++ ++ LSA + G VH +V K Y + V + +ALIDM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K V A E+F M E+++ +WNS++T +EQ G L +F RM+ +G +PD VT
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC------- 392
++V+ AC+ L AL G QIH +V K DD+ + NAL+DMY KC
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTN-------KFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 393 ------------------------GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
S++ A+ +F+KM++++V SWN +I GY +G+ +E
Sbjct: 305 RVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEE 364
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSAC-----------SHSGFLSQGREFLPLMESRYGV 477
AL +F + + P TF +LSAC +H+ L QG EF ES V
Sbjct: 365 ALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFV 424
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ IDM + G + + + M E + V W ++ +G
Sbjct: 425 GNSL------IDMYMKCGSIEDGSRVFEKM-KERDCVSWNAIIVGYAQNG 467
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 211/437 (48%), Gaps = 51/437 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA +L G ++H+ + ++ ++LI+MYSKC + A VF+ + E
Sbjct: 152 SALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM-IE 210
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ T+N++I+ + N A + L+ F M G+ PD+ T ++ C + A+ E +I
Sbjct: 211 RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270
Query: 157 HGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPL------------------ 197
H V K D+ +G+ALV+ Y KC + EA +VF+ + +
Sbjct: 271 HARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAAS 330
Query: 198 -------------RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
R+VV WNA++ GY Q GE +AL +FR + +E IW + +T +LSA
Sbjct: 331 VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSA 390
Query: 245 LIMMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ GR H V+K G+ +S + V N+LIDMY K + + +FE M+E
Sbjct: 391 CANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKE 450
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+D SWN+I+ + Q G L++F +ML G +PD VT VL ACSH + GR
Sbjct: 451 RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY 510
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ +GL + D + ++D+ + G + +A+ + M D W ++
Sbjct: 511 FFSMEEHGLIP------LKDHY--TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 562
Query: 418 LGYGMDGQ---GKEALD 431
+ G GK A +
Sbjct: 563 AACKVHGNIEMGKHAAE 579
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 41/324 (12%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFV 89
TLA+ +++ CA L++G +IH+ +++T L + +L++MY+KC ++ A V
Sbjct: 250 TLASVVSA---CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306
Query: 90 FNNLS------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
F+ +S + NV ++NA+I+G+ N + L
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH------GLVFKLGLDLDVYIGS 173
F +++ + P YTF L+ C ++ +L ++ H G F+ G + D+++G+
Sbjct: 367 RLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGN 426
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+L++ Y+KC +E+ +VFE++ RD V WNA++ GYAQ G +AL++FR+M G
Sbjct: 427 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKP 486
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T+ GVL A G + GR + + G ++D+ G+ C+ EA +
Sbjct: 487 DHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLI 546
Query: 294 EMME-EKDIFSWNSIMTVHEQCGN 316
E M D W S++ + GN
Sbjct: 547 EAMPVNPDAVVWGSLLAACKVHGN 570
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-----IDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
L CA+ +L G++ H+++L+ G +S + + SLI+MY KC ++ VF
Sbjct: 388 LSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEK 447
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E + ++NA+I G+ N + + L F M G PD T ++ C C ++E
Sbjct: 448 MK-ERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVL-CACSHAGLVE 505
Query: 153 VKK-------IHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ HGL+ K D Y + +V+ + + EA + E +P+ D V+W
Sbjct: 506 EGRHYFFSMEEHGLIPLK-----DHY--TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 558
Query: 204 NAM-----VNGYAQIGEF--HKALEV 222
++ V+G ++G+ K LE+
Sbjct: 559 GSLLAACKVHGNIEMGKHAAEKLLEI 584
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 346/586 (59%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C + L+ G+EIH ++++G ++T L NMY+KC Q+ A VF+ + E +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERD 200
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +++G+ N A L+ M + + P T ++ + + K+IHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G D V I +ALV+ Y KC +E A ++F+ + R+VV WN+M++ Y Q +
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F++M EG+ + +V G L A +G + GR +H + V++G D V V+N+LI
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +F ++ + + SWN+++ Q G L F +M S +PD T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +V+ A + L+ H + IHG ++ + L KN VF+ AL+DMY KCG++ A
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKN--------VFVTTALVDMYAKCGAIMIA 492
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+++F MS++ V +WN MI GYG G GK AL++F M + +KP+ VTF+ V+SACSHS
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G + +M+ Y + +++HY ++D+LGRAG+LNEA++ + MP + V+
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N + AE AA+R+F+L P G +VL++NIY A +E+V +R +M +Q +
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PGCS +E+K+ +H+F S +HP++K IYA L L ++E G
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 257/503 (51%), Gaps = 19/503 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
+ HP L L+ C ++L++ ++I + + G+ T L++++ + +
Sbjct: 35 VYEHPAALL-----LERC---SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVD 86
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF + + NV Y+ M+ GF K L FF MR V P Y F L+K C
Sbjct: 87 EAARVFEPIDSKLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
D + K+IHGL+ K G LD++ + L N Y KC+ + EA KVF+ +P RD+V WN
Sbjct: 146 GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN 205
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+V GY+Q G ALE+ + M +E + S T+ VL A+ + G+ +HG ++
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G+DS V + AL+DMY K + A ++F+ M E+++ SWNS++ + Q N + +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ML G +P V+ L AC+ L L GR IH V GL +N V + N+
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN--------VSVVNS 377
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY KC + A +F K+ + + SWN MILG+ +G+ +AL+ FS M +KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
T+V V++A + ++ +++ + R + + T ++DM + G + A L
Sbjct: 438 TFTYVSVITAIAELS-ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLI 495
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
M +E + W ++ HG
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHG 518
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 353/600 (58%), Gaps = 18/600 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQL +L++G+EIH ++ G + ++T+++N+Y+KC Q++ A +F + + +
Sbjct: 149 LQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRD 207
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +++G+ N FA + + M++ G PD T ++ D+ A+ + IHG
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHG 267
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
F+ G + V + +A+++TY KC + A VF+ + R+VV WN M++GYAQ GE +
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV--VKMGYDSGVPVMNAL 276
A F +M EG+ + ++ G L A +G + GR VH ++ K+G+D V VMN+L
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD--VSVMNSL 385
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I MY K K V A +F ++ K + +WN+++ + Q G + L LF M S +PD
Sbjct: 386 ISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDS 445
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +V+ A + L+ + IHG + + KN VF+ AL+D + KCG+++
Sbjct: 446 FTLVSVITALADLSVTRQAKWIHGLAIRTLMDKN--------VFVCTALIDTHAKCGAIQ 497
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F M ++ V +WN MI GYG +G G+EALD+F+ M +KP+E+TF+ V++ACS
Sbjct: 498 TARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS 557
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG + +G + M+ YG+ PT++HY ++D+LGRAG+L++A++ MP + V
Sbjct: 558 HSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVL 617
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+L A R+H N +L E A +F L+P G +VL++N+Y + +++V +R M ++
Sbjct: 618 GAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKK 677
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
++K PGCS +EL++ +HTF S +HP++K IYA L +L ++ AG + D++S
Sbjct: 678 GIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMK-----AAGYVPDTNS 732
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 250/498 (50%), Gaps = 19/498 (3%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
+ + HP + L+LC T+L++ +I +++ G + L T LI+++ K
Sbjct: 40 SHVYRHPSAIL-----LELC---TSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNS 91
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ A VF + + +V Y+ M+ G+ N + F+ MR V+P Y F L++
Sbjct: 92 ITEAARVFEPVEHKLDVL-YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQ 150
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
+ + + ++IHG+V G +++ +A+VN Y KC+ +E+A K+FE +P RD+V
Sbjct: 151 LSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVS 210
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN +V GYAQ G +A++V +M + G T+ VL A+ + + GR +HG
Sbjct: 211 WNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAF 270
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ G++ V V A++D Y K V A +F+ M +++ SWN+++ + Q G +
Sbjct: 271 RAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFA 330
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
F +ML G +P V+ L AC++L L GR +H + + DV +
Sbjct: 331 TFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF--------DVSVM 382
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+L+ MY+KC + A VF + K V +WN MILGY +G EAL++F M +K
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIK 442
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD T V V++A + Q + ++ + R + + T +ID + G + A +
Sbjct: 443 PDSFTLVSVITALADLSVTRQAK-WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARK 501
Query: 503 LALAMPNEANPVVWRTLL 520
L + E + + W ++
Sbjct: 502 L-FDLMQERHVITWNAMI 518
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/620 (35%), Positives = 350/620 (56%), Gaps = 35/620 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + L+ G+++H Y LR G + +L+ MY+K ++ + +
Sbjct: 195 FTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD-QKTFTNNALMAMYAKLGRVDDSKAL 253
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + ++ ++N MIS F +D + L FF M GV D T ++ C +
Sbjct: 254 FESF-VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLER 312
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+IH V + L + ++GSALV+ Y C+ +E +VF+ + R + LWNAM++
Sbjct: 313 LDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMIS 372
Query: 209 GYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GYA+ G KAL +F M K G+ + T+ V+ A + F N +HG VK+G+
Sbjct: 373 GYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK 432
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V NAL+DMY + + + IF+ ME +D SWN+++T + G + L L M
Sbjct: 433 EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM 492
Query: 328 -----------------LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
++P+ +T TVLP C+ LAA+ G++IH Y + N LA
Sbjct: 493 QRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLA-- 550
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+ + +AL+DMY KCG + ++ VF +M K+V +WN++I+ GM G+G+EAL
Sbjct: 551 ------SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 604
Query: 431 DMFSCMCE-----AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
++F M + KP+EVTF+ V +ACSHSG +S+G M+ +GV PT +HY
Sbjct: 605 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 664
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
CV+D+LGRAGQL EAYEL MP E + V W +LL A R+H N +L E+AA+ + LEP
Sbjct: 665 CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP 724
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+YVL+SNIY + G + + +++R MRQ V+K PGCSWIE +D +H F++ D SHP
Sbjct: 725 NVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHP 784
Query: 605 EAKSIYAELHSLTARLREHG 624
+++ ++ L +L+ ++R+ G
Sbjct: 785 QSEQLHGFLETLSEKMRKEG 804
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/537 (27%), Positives = 257/537 (47%), Gaps = 40/537 (7%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMY 77
T SG + N F A L+ + +L+ G++IH+ ++ G S +++ +L+NMY
Sbjct: 84 TVSGARPDNFAFP-----AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMY 138
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
KC + VF+ ++ V ++N+ I+ + + L+ F M+ + +T
Sbjct: 139 GKCGGIGDVCKVFDRITDRDQV-SWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTL 197
Query: 138 PCLIKCCCD--VMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ C + VM L + K++HG ++G D + +AL+ Y K ++++ +FE
Sbjct: 198 VSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFES 256
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
RD+V WN M++ ++Q F +AL FR M EG+ + T+ VL A + G
Sbjct: 257 FVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 316
Query: 255 RVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
+ +H V++ V +AL+DMY + V +F+ + + I WN++++ + +
Sbjct: 317 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 376
Query: 314 CGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G + L LF M+ AG P+ T ++V+PAC H A + IHGY V G
Sbjct: 377 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFK---- 432
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+D ++ NALMDMY++ G M ++ +F M +D SWN MI GY + G+ AL +
Sbjct: 433 ----EDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVL 488
Query: 433 FSCMCE-----------------AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
M KP+ +T + VL C+ +++G+E + R
Sbjct: 489 LHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKE-IHAYAIRN 547
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ I + ++DM + G LN + + MPN+ N + W L+ A +HG + A
Sbjct: 548 MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKGEEA 603
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 217/452 (48%), Gaps = 28/452 (6%)
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
+A+ S SNDF + + + M G PD + FP ++K + + ++IH K
Sbjct: 62 DALRSRTRSNDFR-EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVK 120
Query: 163 LGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
G V + + LVN Y KC + + KVF+ + RD V WN+ + + ++ +ALE
Sbjct: 121 FGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALE 180
Query: 222 VFRRMSKEGIWMSRFTVTGVL---SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
FR M E + +S FT+ V S L +M + G+ +HG +++G D NAL+
Sbjct: 181 AFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMA 239
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V ++ +FE ++D+ SWN++++ Q L F M+ G + D VT
Sbjct: 240 MYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVT 299
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++VLPACSHL L G++IH Y++ N I++ F+ +AL+DMY C +
Sbjct: 300 IASVLPACSHLERLDVGKEIHAYVLRNN-------DLIENSFVGSALVDMYCNCRQVESG 352
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSH 457
+ VF + + + WN MI GY +G ++AL +F M + A L P+ T V+ AC H
Sbjct: 353 RRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVH 412
Query: 458 SGFLSQGREF------LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
S L E RY ++DM R G+++ + + +M
Sbjct: 413 CEAFSNKESIHGYAVKLGFKEDRYV-------QNALMDMYSRMGKMDISETIFDSMEVR- 464
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ V W T++ L G A + + ++E
Sbjct: 465 DRVSWNTMITGYVLSGRYSNALVLLHEMQRME 496
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 15/277 (5%)
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P R W + + +F +A+ + M+ G F VL A+ + K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 256 VVHGIVVKMGY-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+H VK GY S V V N L++MYGK +G+ ++F+ + ++D SWNS + +
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRF 172
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH----GRQIHGYIVVNGLAKN 370
+ L F M + T +V ACS+L +MH G+Q+HGY + G K
Sbjct: 173 EKWEQALEAFRAMQMENMELSSFTLVSVALACSNL-GVMHGLRLGKQLHGYSLRVGDQK- 230
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
F NNALM MY K G + D++ +F +D+ SWN MI + + EAL
Sbjct: 231 --------TFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEAL 282
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
F M ++ D VT VL ACSH L G+E
Sbjct: 283 AFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEI 319
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/627 (34%), Positives = 348/627 (55%), Gaps = 53/627 (8%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL--INMYSKCCQMKYALFVFNNLSC 95
++ L ++L++ ++ H++M+RTG+ P S + L I S ++YA VF+ +
Sbjct: 34 TISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIP- 92
Query: 96 EPNVFTYNAMISGFYSND------FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+PN FT+N +I + S +AF LD + Q P+KYTFP LIK +V +
Sbjct: 93 QPNSFTWNTLIRAYASGPDPVCSIWAF--LDMVSSESQ--CYPNKYTFPFLIKAAAEVSS 148
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +HG+ K + DV++ ++L++ Y C ++ A KVF + +DVV WN+M+NG
Sbjct: 149 LSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 208
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ Q G KALE+F++M E + S T+ GVLSA + + GR V + + +
Sbjct: 209 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEE------------------------------- 298
+ + NA++DMY K + +A +F+ MEE
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
KDI +WN++++ +EQ G + L +F + L + + +T + L AC+ + AL GR
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
IH YI NG+ N ++ +AL+ MY+KCG + A+ VF + K+DV W+ MI
Sbjct: 389 IHSYIKKNGIKMN--------FYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMI 440
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
G M G G EA+DMF M EA +KP+ VTF V ACSH+G + + MES YG+
Sbjct: 441 GGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGI 500
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
VP +HY C++D+LGR+G L +A + AMP + VW LL A ++H N LAE+A
Sbjct: 501 VPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACT 560
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
R+ +LEP + G +VL+SNIY GK++ V ++R MR ++K PGCS IE+ +H F+
Sbjct: 561 RLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 620
Query: 598 SSDRSHPEAKSIYAELHSLTARLREHG 624
S D +HP ++ +Y +LH + +L+ +G
Sbjct: 621 SGDNAHPMSEKVYGKLHEVMEKLKSNG 647
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 200/430 (46%), Gaps = 50/430 (11%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKV 191
++T + +C ++ ++K+ H + + G+ D Y S L F +E A KV
Sbjct: 32 RHTISLIDRCS----SLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKV 87
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMG 249
F+E+P + WN ++ YA + ++ F M S+ + +++T ++ A +
Sbjct: 88 FDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVS 147
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +HG+ +K S V V N+LI Y + A ++F ++EKD+ SWNS++
Sbjct: 148 SLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 207
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q G+ D L LF +M S + VT VL AC+ + L GR++ YI N +
Sbjct: 208 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNV 267
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF--------------------------- 402
N + + NA++DMYTKCGS+ DA+ +F
Sbjct: 268 N--------LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 319
Query: 403 ----TKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSH 457
M KKD+ +WN +I Y +G+ EAL +F + +K +++T V LSAC+
Sbjct: 320 REVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQ 379
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G L GR ++ + G+ + +I M + G L +A E+ ++ + + VW
Sbjct: 380 VGALELGRWIHSYIK-KNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV-EKRDVFVWS 437
Query: 518 TLLAASRLHG 527
++ +HG
Sbjct: 438 AMIGGLAMHG 447
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 38/374 (10%)
Query: 9 NPFSSCFNF--STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
+P S + F SS +Q + + +T I + A ++L GQ +H +++ +
Sbjct: 111 DPVCSIWAFLDMVSSESQCYPNKYTFPFLI---KAAAEVSSLSLGQSLHGMAIKSAVGSD 167
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
SLI+ Y C + A VF + E +V ++N+MI+GF K L+ F M
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIK-EKDVVSWNSMINGFVQKGSPDKALELFKKME 226
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
V T ++ C + + +++ + + +++++ + +A+++ Y KC +E
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 286
Query: 187 EALKVFE-------------------------------ELPLRDVVLWNAMVNGYAQIGE 215
+A ++F+ +P +D+V WNA+++ Y Q G+
Sbjct: 287 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGK 346
Query: 216 FHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
++AL VF + ++ I +++ T+ LSA +G + GR +H + K G V +
Sbjct: 347 PNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTS 406
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
ALI MY K + +A E+F +E++D+F W++++ G + +F +M A +P
Sbjct: 407 ALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKP 466
Query: 335 DLVTFSTVLPACSH 348
+ VTF+ V ACSH
Sbjct: 467 NGVTFTNVFCACSH 480
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +++L CA L+ G+ IHSY+ + GI + ++LI+MYSKC ++ A VFN++
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV 428
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +VF ++AMI G + + +D F M++ V P+ TF + C V E
Sbjct: 429 E-KRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEA 487
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMV 207
+ + + + G+ + + +V+ + ++E+A+K E +P+ +W A++
Sbjct: 488 ESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 342/643 (53%), Gaps = 63/643 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ C + + G H + G + +L+ MYS+C ++ A +F+ ++
Sbjct: 17 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 76
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFN------HMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+V ++N+++S + A+ LD F+ H + D + ++ C + AV
Sbjct: 77 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 136
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K++HG + G LDV++G+AL++ Y KC ME A+KVF + +DVV WNAMV GY
Sbjct: 137 PQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 196
Query: 211 AQIGEFHKALEVFRRMSKEGI------WMSRF---------------------------- 236
+Q G F A E+F+ M KE I W +
Sbjct: 197 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 256
Query: 237 -TVTGVLSALIMMGFFKNGRVVHGIVVKM----------GYDSGVPVMNALIDMYGKGKC 285
T+ VLSA +G F G +H +K G D + V NALIDMY K +
Sbjct: 257 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 316
Query: 286 VGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA--GFQPDLVTFST 341
A IF+ +EE+++ +W ++ H Q G+ + L+LF M+S G P+ T S
Sbjct: 317 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 376
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC+HLAA+ G+QIH Y++ + D F+ N L++MY+KCG + A+ V
Sbjct: 377 ILMACAHLAAIRIGKQIHAYVLRHHQ------YDSSAYFVANCLINMYSKCGDVDTARHV 430
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F MS+K SW M+ GYGM G+G EALD+F M +A PD++TF+ VL ACSH G +
Sbjct: 431 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 490
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
QG + M + YG+ P EHY ID+L R G+L++A++ MP E VVW LL+
Sbjct: 491 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 550
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+H N +LAE A ++ ++ + G+Y L+SNIY G++++V IRH M++ ++K
Sbjct: 551 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 610
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSW++ + G +F DRSHP + IYA L SL R++ G
Sbjct: 611 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 653
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 219/455 (48%), Gaps = 54/455 (11%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G D +T P ++K C ++ + HGL+ G + +V+I +ALV Y +C
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 185 MEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMS---KEGIWMSRFTV 238
+EEA +F+E+ R DV+ WN++V+ + + AL++F +M+ E R +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 239 TGVLSALIMMGFFK---NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
+++ L G K + VHG ++ G V V NALID Y K + A+++F M
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------------------------------ 325
ME KD+ SWN+++ + Q GN LF
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 326 -----RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL--AKNGSCKDIDD 378
+M+ +G P+ VT +VL AC+ L A G +IH Y + N L N + +D
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 379 VFMNNALMDMYTKCGSMRDAQMVF--TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ + NAL+DMY+KC S + A+ +F + +++V +W +MI G+ G +AL +F M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360
Query: 437 CEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--CVIDMLG 492
+ P+ T +L AC+H + G++ + R+ + ++ C+I+M
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYV-LRHHQYDSSAYFVANCLINMYS 419
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G ++ A + +M ++ + + W +++ +HG
Sbjct: 420 KCGDVDTARHVFDSM-SQKSAISWTSMMTGYGMHG 453
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 158/361 (43%), Gaps = 62/361 (17%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + G + FT+ VL A + ++ G HG++ G++S V + NAL+ MY +
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 286 VGEALEIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRML------SAGFQPDL 336
+ EA IF+ + ++ D+ SWNSI++ H + N L LF +M + D+
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
++ +LPAC L A+ +++HG + NG DVF+ NAL+D Y KCG M
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGT--------FLDVFVGNALIDAYAKCGLME 172
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK-------------- 442
+A VF M KDV SWN M+ GY G K A ++F M + +
Sbjct: 173 NAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYS 232
Query: 443 ---------------------PDEVTFVGVLSACSHSGFLSQGRE---------FLPLME 472
P+ VT + VLSAC+ G SQG E L L
Sbjct: 233 QRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDN 292
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDL 531
G + Y +IDM + A + +P E N V W ++ +G+++
Sbjct: 293 DFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSND 352
Query: 532 A 532
A
Sbjct: 353 A 353
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGII---------DSPLSI-TSLINMYSKCCQM 83
T I+ L CA +G EIH+Y L+ ++ D L + +LI+MYSKC
Sbjct: 258 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 317
Query: 84 KYALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCL 140
K A +F+++ E NV T+ MI G + L F M GV P+ YT C+
Sbjct: 318 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 377
Query: 141 IKCCCDVMAVLEVKKIHGLVFK-LGLDLDVY-IGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C + A+ K+IH V + D Y + + L+N Y KC ++ A VF+ + +
Sbjct: 378 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 437
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ W +M+ GY G +AL++F +M K G T VL A G G
Sbjct: 438 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/619 (35%), Positives = 352/619 (56%), Gaps = 17/619 (2%)
Query: 9 NPFSSCFN-FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
N F F F+ G +PF T L+L + G+ +H +L+ G +
Sbjct: 25 NKFIEAFELFARLHGEGHELNPFVFTTV---LKLLVSMEWAELGRIVHGCVLKVGYGSNT 81
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
T+LI+ YS + A VF+ +S + ++ ++ MI+ + ND + L+FF+ MR
Sbjct: 82 FIGTALIDAYSVSGCVSMAREVFDEISSK-DMVSWTGMIASYAENDCFSEALEFFSQMRV 140
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G P+ +TF ++K C + K +H V K + D+Y+G L+ Y +C ++
Sbjct: 141 AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDD 200
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A + F ++P DV+ W+ M++ +AQ G+ KALE+F +M + + ++FT + VL A
Sbjct: 201 AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASAD 260
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + +HG +K G + V V NAL+ Y K C+ +++E+FE + +++ SWN+I
Sbjct: 261 IESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTI 320
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + Q G+ + L LF ML Q VT+S++L AC+ LAAL G Q+H
Sbjct: 321 IVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCL------ 374
Query: 368 AKNGSCKDI--DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
+ K I DV + NAL+DMY KCGS++DA+ +F + +D SWN +I GY M G
Sbjct: 375 ----TAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGL 430
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
G EA+ MF+ M E K KPDE+TFVGVLSACS++G L +G+++ M+ YG+ P +EHYT
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYT 490
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++ ++GR+G L++A + +P E + ++WR LL A +H + +L I+AQRV +LEP
Sbjct: 491 CMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPR 550
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
++VL+SNIY ++ V +R M+++ V+K PG SWIE + +H F +D SH +
Sbjct: 551 DEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHAD 610
Query: 606 AKSIYAELHSLTARLREHG 624
K I L L + R+ G
Sbjct: 611 LKLINGMLEFLNMKTRKAG 629
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 178/348 (51%), Gaps = 22/348 (6%)
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+E+P R+ V + +++GYAQ +F +A E+F R+ EG ++ F T VL L+ M +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ GR+VHG V+K+GY S + ALID Y CV A E+F+ + KD+ SW ++
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + L F +M AGF+P+ TF+ VL AC L G+ +H ++ +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER- 180
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+++ L+++YT+CG DA F M K DV W+ MI + GQ ++AL
Sbjct: 181 -------DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKAL 233
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES------RYGVVPTIEHY 484
++F M A + P++ TF VL A S E L L ++ + G+ +
Sbjct: 234 EIFCQMRRAFVIPNQFTFSSVLQA-------SADIESLDLSKTIHGHALKAGLSTDVFVS 286
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ + G + ++ EL A+ + N V W T++ + G+ + A
Sbjct: 287 NALMACYAKCGCIEQSMELFEALSDR-NDVSWNTIIVSYVQLGDGERA 333
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/599 (36%), Positives = 336/599 (56%), Gaps = 47/599 (7%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
+ IH+ M++TG+ ++ +++ L+ + YA+ VF+ + EPN+ +N M G
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQ-EPNLLIWNTMFRG 63
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
+ L + M LG+LPD YTFP L+K C E ++IHG V KLG DLD
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123
Query: 169 VYIGS-------------------------------ALVNTYLKCQFMEEALKVFEELPL 197
+Y+ + AL+ Y+ ++E A K+F+E+P
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRV 256
+DVV WNAM++GY + G + +ALE+F+ M + T+ V+SA + GR
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH + G+ S + ++NALID+Y K V A E+F+ + KD+ SWN+++ +
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCK 374
+ L LF ML +G P+ VT ++LPAC+HL A+ GR IH YI + G+ N S
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS- 362
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVF-TKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ +L+DMY KCG + AQ VF + MS + +++WN MI G+ M G+ A D+F
Sbjct: 363 ------LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIF 416
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S M ++PD++TFVG+LSACSHSG L GR M Y + P +EHY C+ID+LG
Sbjct: 417 SRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGH 476
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
+G EA E+ MP E + V+W +LL A ++HGN +L E A+++ ++EPG+ G+YVL+
Sbjct: 477 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLL 536
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKN-PGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
SNIY A G++ EV IR + + ++K PGCS IE+ +H FI D+ HP+ + IY
Sbjct: 537 SNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYG 595
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 198/417 (47%), Gaps = 45/417 (10%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE---ALKVFEELPLRDVVLWNAMVNG 209
V+ IH + K GL Y S L+ + + A+ VF+ + ++++WN M G
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+A + AL+++ M G+ +T +L + K G+ +HG V+K+G+D
Sbjct: 64 HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEM-------------------------------MEE 298
+ V +LI MY + + +A ++F++ +
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPG 183
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLF-DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
KD+ SWN++++ + + GN+ L LF + M+ +PD T TV+ AC+ ++ GR
Sbjct: 184 KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRH 243
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H +I +G A N + + NAL+D+Y+K G + A +F + KDV SWN +I
Sbjct: 244 VHSWINDHGFASN--------LKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLI 295
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY-G 476
GY KEAL +F M + P++VT + +L AC+H G + GR + + G
Sbjct: 296 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKG 355
Query: 477 VVPTIEHY-TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
VV + T +IDM + G ++ A ++ + + + W +++ +HG + A
Sbjct: 356 VVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 218/520 (41%), Gaps = 97/520 (18%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
++ PF L +C A ++GQ+IH ++L+ G TSLI+MY++ +++
Sbjct: 89 SYTFPFLLKSC-------AKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLE 141
Query: 85 YALFVFNNLSCE------------------------------PNVFTYNAMISGFYSNDF 114
A VF+ S +V ++NAMISG+
Sbjct: 142 DARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGN 201
Query: 115 AFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L+ F M + V PD+ T ++ C ++ + +H + G ++ I +
Sbjct: 202 YKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVN 261
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y K +E A ++F+ L +DV+ WN ++ GY + + +AL +F+ M + G
Sbjct: 262 ALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 321
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGV-PVMNALIDMYGKGKCVGEAL 290
+ T+ +L A +G GR +H + K G + V + +LIDMY K + A
Sbjct: 322 NDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQ 381
Query: 291 EIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++F+ M + + +WN++++ G + +F RM G +PD +TF +L ACSH
Sbjct: 382 QVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHS 441
Query: 350 AALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
L GR I GY + L G D+
Sbjct: 442 GMLDLGRNIFRSMTRGYEITPKLEHYGCMIDL---------------------------- 473
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
G G KEA +M + M ++PD V + +L AC G L G
Sbjct: 474 ---------------LGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELG 515
Query: 465 REFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
F L++ G + Y + ++ AG+ NE ++
Sbjct: 516 ESFAKKLIKIEPGNSGS---YVLLSNIYAAAGRWNEVAKI 552
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 332/578 (57%), Gaps = 10/578 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L +G+ IH + G+ T+L+ M +C + A F ++ + +V YNA+I+
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIA-DRDVVVYNALIA 303
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + + + MR GV ++ T+ ++ C A+ K IH + + G
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSS 363
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV IG+AL++ Y +C + +A ++F +P RD++ WNA++ GYA+ + +A+ ++++M
Sbjct: 364 DVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQ 423
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
EG+ R T +LSA + +G+++H +++ G S + NAL++MY + +
Sbjct: 424 SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLM 483
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
EA +FE + +D+ SWNS++ H Q G+++ +LF M + +PD +TF++VL C
Sbjct: 484 EAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCK 543
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ AL G+QIHG I +GL DV + NAL++MY +CGS++DA+ VF +
Sbjct: 544 NPEALELGKQIHGRITESGLQL--------DVNLGNALINMYIRCGSLQDARNVFHSLQH 595
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP-DEVTFVGVLSACSHSGFLSQGRE 466
+DV SW MI G G+ +A+++F M +P D TF +LSAC+H+G + +G +
Sbjct: 596 RDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQ 655
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
MES YGV+PTIEHY C++ +LGRA + EA L MP + VW TLL A R+H
Sbjct: 656 IFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 715
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN LAE AA +L + Y+L+SN+Y A G++++V IR M + +RK PG SW
Sbjct: 716 GNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 775
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ + +H FI++DRSHPE IYAEL L+ + E G
Sbjct: 776 IEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAG 813
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 250/467 (53%), Gaps = 10/467 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L C L+ G++IHS +++ G P SL++MY KC + A VF +
Sbjct: 130 TYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGI 189
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S +V +YN M+ + + + L F M G+ PDK T+ L+ + E
Sbjct: 190 SPR-DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L + GL+ D+ +G+ALV ++C ++ A + F+ + RDVV++NA++ AQ
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQH 308
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A E + RM +G+ ++R T +L+A + G+++H + + G+ S V +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI MY + + +A E+F M ++D+ SWN+I+ + + + +RL+ +M S G +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P VTF +L AC++ +A G+ IH I+ +G+ NG + NALM+MY +CG
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNG--------HLANALMNMYRRCG 480
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +AQ VF +DV SWN MI G+ G + A +F M +L+PD +TF VLS
Sbjct: 481 SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
C + L G++ + + G+ + +I+M R G L +A
Sbjct: 541 GCKNPEALELGKQIHGRI-TESGLQLDVNLGNALINMYIRCGSLQDA 586
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 245/500 (49%), Gaps = 11/500 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT +A LQ C + L + + IH+ M+ G+ LINMY KC + A VF
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V ++N++IS + F K F M+ G +P+K T+ ++ C +
Sbjct: 88 MP-RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELEN 146
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
KKIH + K G D + ++L++ Y KC + A +VF + RDVV +N M+ YAQ
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ L +F +MS EGI + T +L A G+ +H + V+ G +S + V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ M + V A + F+ + ++D+ +N+++ Q G++ + RM S G
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ T+ ++L ACS AL G+ IH +I +G + DV + NAL+ MY +C
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS--------SDVQIGNALISMYARC 378
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A+ +F M K+D+ SWN +I GY EA+ ++ M +KP VTF+ +L
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC++S + G+ + R G+ +++M R G L EA + +
Sbjct: 439 SACANSSAYADGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGSLMEAQNV-FEGTQARD 496
Query: 513 PVVWRTLLAASRLHGNTDLA 532
+ W +++A HG+ + A
Sbjct: 497 VISWNSMIAGHAQHGSYETA 516
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 10/390 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D+ T+ L++ C + E K+IH + + G+ D+++ + L+N Y+KC+ + +A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P RDV+ WN++++ YAQ G KA ++F M G ++ T +L+A +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
NG+ +H ++K GY V N+L+ MYGK + A ++F + +D+ S+N+++ ++
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
Q L LF +M S G PD VT+ +L A + + L G++IH V GL
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN---- 261
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D+ + AL+ M +CG + A+ F ++ +DV +N +I G EA +
Sbjct: 262 ----SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
+ M + + T++ +L+ACS S L G+ + S G ++ +I M
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGK-LIHSHISEDGHSSDVQIGNALISMYA 376
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAA 522
R G L +A EL MP + + W ++A
Sbjct: 377 RCGDLPKARELFYTMPKR-DLISWNAIIAG 405
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/560 (36%), Positives = 315/560 (56%), Gaps = 40/560 (7%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ +F + EPN+ +N M G N + L + M LG+LP+ Y+FP L+K
Sbjct: 15 LSYAISIFETIQ-EPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK 73
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C A++E ++IHG V KLG DLD+Y+ ++L++ Y + +E+A KVF+
Sbjct: 74 SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+ ++DVV WNAM++GY + F +ALE+++ M K +
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ V+SA G + GR +H + G+ S + ++N LID+Y K V A
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ + +KD+ SWN+++ H + L LF ML +G P+ VT +VLPAC+HL A
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVF-MNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ GR IH YI N K + + + +L+DMY KCG + A+ VF M + +
Sbjct: 314 IDIGRWIHVYI-------NKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+SWN MI G+ M G+ A D+FS M + + PD++TFVG+LSACSHSG L GR
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS 426
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M Y + P +EHY C+ID+LG G EA E+ MP E + V+W +LL A ++H N +
Sbjct: 427 MSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVE 486
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AQ + ++EP + G+YVL+SNIY G++++V IR + + ++K PGCS IE+
Sbjct: 487 LGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Query: 591 DGLHTFISSDRSHPEAKSIY 610
+H FI D+ HP + IY
Sbjct: 547 SVVHEFIIGDKFHPRNREIY 566
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 191/428 (44%), Gaps = 57/428 (13%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+++ PF L +C A L +GQ+IH ++L+ G TSLI+MY++ ++
Sbjct: 64 NSYSFPFLLKSC-------AKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRL 116
Query: 84 KYALFVFNNLSCE------------------------------PNVFTYNAMISGFYSND 113
+ A VF+ S +V ++NAMISG+
Sbjct: 117 EDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETC 176
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L+ + M + V PD+ T ++ C ++ +++H + G ++ I +
Sbjct: 177 NFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVN 236
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
L++ Y KC +E A +F+ L +DV+ WN ++ G+ + + +AL +F+ M + G
Sbjct: 237 VLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESP 296
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T+ VL A +G GR +H + K G + ++ +LIDMY K + A +
Sbjct: 297 NDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQ 356
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ M + + SWN+++ G + LF +M G PD +TF +L ACSH
Sbjct: 357 VFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGM 416
Query: 352 LMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA-QMVFTKM 405
L GR I Y + L G ++D+ CG ++A +M+ T
Sbjct: 417 LDLGRHIFRSMSQDYKITPKLEHYG------------CMIDLLGHCGLFKEAKEMIRTMP 464
Query: 406 SKKDVASW 413
+ D W
Sbjct: 465 MEPDGVIW 472
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 11/283 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA +++ G+++HS++ G + + LI++YSKC +++ A +F
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L+ + +V ++N +I G + + L F M + G P+ T ++ C + A+
Sbjct: 258 LA-KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDI 316
Query: 153 VKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IH + K G+ + ++L++ Y KC +E A +VF+ + R + WNAM+ G+
Sbjct: 317 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 376
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A G+ + A ++F +M K GI T G+LSA G GR I M D +
Sbjct: 377 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGR---HIFRSMSQDYKI 433
Query: 271 -PVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
P + +ID+ G EA E+ M E D W S++
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/643 (34%), Positives = 342/643 (53%), Gaps = 63/643 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ C + + G H + G + +L+ MYS+C ++ A +F+ ++
Sbjct: 124 LKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGI 183
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFN------HMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+V ++N+++S + A+ LD F+ H + D + ++ C + AV
Sbjct: 184 DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAV 243
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K++HG + G LDV++G+AL++ Y KC ME A+KVF + +DVV WNAMV GY
Sbjct: 244 PQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 303
Query: 211 AQIGEFHKALEVFRRMSKEGI------WMSRF---------------------------- 236
+Q G F A E+F+ M KE I W +
Sbjct: 304 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 363
Query: 237 -TVTGVLSALIMMGFFKNGRVVHGIVVKM----------GYDSGVPVMNALIDMYGKGKC 285
T+ VLSA +G F G +H +K G D + V NALIDMY K +
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423
Query: 286 VGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA--GFQPDLVTFST 341
A IF+ +EE+++ +W ++ H Q G+ + L+LF M+S G P+ T S
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC+HLAA+ G+QIH Y++ + D F+ N L++MY+KCG + A+ V
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQ------YDSSAYFVANCLINMYSKCGDVDTARHV 537
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F MS+K SW M+ GYGM G+G EALD+F M +A PD++TF+ VL ACSH G +
Sbjct: 538 FDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMV 597
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
QG + M + YG+ P EHY ID+L R G+L++A++ MP E VVW LL+
Sbjct: 598 DQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLS 657
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+H N +LAE A ++ ++ + G+Y L+SNIY G++++V IRH M++ ++K
Sbjct: 658 ACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKR 717
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSW++ + G +F DRSHP + IYA L SL R++ G
Sbjct: 718 PGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 760
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 243/515 (47%), Gaps = 56/515 (10%)
Query: 66 SPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
SP S+ T ++ Y C YAL V ++ P V+ +N +I ++
Sbjct: 49 SPRSLGTGVVASYLACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCR 107
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G D +T P ++K C ++ + HGL+ G + +V+I +ALV Y +C
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167
Query: 185 MEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMS---KEGIWMSRFTV 238
+EEA +F+E+ R DV+ WN++V+ + + AL++F +M+ E R +
Sbjct: 168 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 227
Query: 239 TGVLSALIMMGFFK---NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
+++ L G K + VHG ++ G V V NALID Y K + A+++F M
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 287
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------------------------------ 325
ME KD+ SWN+++ + Q GN LF
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347
Query: 326 -----RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK--NGSCKDIDD 378
+M+ +G P+ VT +VL AC+ L A G +IH Y + N L N + +D
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 407
Query: 379 VFMNNALMDMYTKCGSMRDAQMVF--TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ + NAL+DMY+KC S + A+ +F + +++V +W +MI G+ G +AL +F M
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 467
Query: 437 CEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--CVIDMLG 492
+ P+ T +L AC+H + G++ + R+ + ++ C+I+M
Sbjct: 468 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL-RHHQYDSSAYFVANCLINMYS 526
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G ++ A + +M ++ + + W +++ +HG
Sbjct: 527 KCGDVDTARHVFDSM-SQKSAISWTSMMTGYGMHG 560
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 185/416 (44%), Gaps = 62/416 (14%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +V +YL C + AL V E + V WN ++ + + G A+ V RM + G
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ FT+ VL A + ++ G HG++ G++S V + NAL+ MY + + EA
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 291 EIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRML------SAGFQPDLVTFST 341
IF+ + ++ D+ SWNSI++ H + N L LF +M + D+++
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC L A+ +++HG + NG DVF+ NAL+D Y KCG M +A V
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNG--------TFLDVFVGNALIDAYAKCGLMENAVKV 284
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK------------------- 442
F M KDV SWN M+ GY G K A ++F M + +
Sbjct: 285 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 344
Query: 443 ----------------PDEVTFVGVLSACSHSGFLSQGRE---------FLPLMESRYGV 477
P+ VT + VLSAC+ G SQG E L L G
Sbjct: 345 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 404
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDLA 532
+ Y +IDM + A + +P E N V W ++ +G+++ A
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 460
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 15/236 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGII---------DSPLSI-TSLINMYSKCCQM 83
T I+ L CA +G EIH+Y L+ ++ D L + +LI+MYSKC
Sbjct: 365 TIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSF 424
Query: 84 KYALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCL 140
K A +F+++ E NV T+ MI G + L F M GV P+ YT C+
Sbjct: 425 KAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCI 484
Query: 141 IKCCCDVMAVLEVKKIHGLVFK-LGLDLDVY-IGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C + A+ K+IH V + D Y + + L+N Y KC ++ A VF+ + +
Sbjct: 485 LMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK 544
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ W +M+ GY G +AL++F +M K G T VL A G G
Sbjct: 545 SAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 207/586 (35%), Positives = 345/586 (58%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C + L+ G+EIH ++++G ++T L NMY+KC Q+ A VF+ + E +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP-ERD 200
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +++G+ N A L+ N M + + P T ++ + + K+IHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G D V I +ALV+ Y KC ++ A +F+ + R+VV WN+M++ Y Q +
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F++M EG+ + +V G L A +G + GR +H + V++ D V V+N+LI
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLIS 380
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +F ++ + I SWN+++ Q G L F +M + +PD T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFT 440
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +V+ A + L+ H + IHG ++ N L KN VF+ AL+DMY KCG++ A
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRNCLDKN--------VFVTTALVDMYAKCGAIMIA 492
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+++F MS++ V +WN MI GYG G GK AL++F M + ++P+ VTF+ V+SACSHS
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHS 552
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G + +M+ Y + P+++HY ++D+LGRAG+LNEA++ + MP + V+
Sbjct: 553 GLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N + AE A+R+F+L P G +VL++NIY A +E+V +R +M +Q +
Sbjct: 613 MLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PGCS +E+K+ +H+F S +HP +K IYA L L +++E G
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAG 718
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 263/530 (49%), Gaps = 23/530 (4%)
Query: 2 LSKISRINPFSSCFNFSTSSGN----QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSY 57
+S +S+I P SS S N + HP L L+ C ++L++ + I
Sbjct: 8 VSTVSQIPPISSSHRHFLSQRNYIPANVYEHPAALL-----LERC---SSLKELRHILPL 59
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
+ + G+ L T L++++ + + A VF + + NV Y M+ GF K
Sbjct: 60 IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYT-MLKGFAKVSDLDK 118
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L FF MR V P Y F L+K C D + K+IHGL+ K G LD++ + L N
Sbjct: 119 ALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y KC+ + EA KVF+ +P RD+V WN +V GY+Q G ALE+ M +E + S T
Sbjct: 179 MYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFIT 238
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ VL A+ + + G+ +HG ++ G+DS V + AL+DMY K + A +F+ M
Sbjct: 239 IVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGML 298
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
E+++ SWNS++ + Q N + +F +ML G +P V+ L AC+ L L GR
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
IH V L +N V + N+L+ MY KC + A +F K+ + + SWN MI
Sbjct: 359 IHKLSVELELDRN--------VSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMI 410
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
LG+ +G+ EAL+ FS M +KPD T+V V++A + + ++ + R +
Sbjct: 411 LGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAK-WIHGVVMRNCL 469
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ T ++DM + G + A L M +E + W ++ HG
Sbjct: 470 DKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/578 (37%), Positives = 321/578 (55%), Gaps = 44/578 (7%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ VF + EPN+ +N M+ G S+ L+ + M LG LP+ Y+FP L+K
Sbjct: 14 LPYAISVFETIQ-EPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLK 72
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C A E ++IH V KLG LD Y+ ++L++ Y + +E+A KVF+
Sbjct: 73 SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+ RDVV WNAM+ GY + G + +ALE+F+ M + +
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM----GYDSGVPVMNALIDMYGKGKCVG 287
T+ V+SA G + GR VH V G+ S + ++NALID+Y K V
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +FE + KD+ SWN+++ + + L LF ML +G P+ VT +VLPAC+
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDI-DDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
HL A+ GR IH YI + K + ++ + +L+DMY KCG + A VF M
Sbjct: 313 HLGAIDIGRWIHVYI-------DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+ ++SWN MI G+ M G+ A D+FS M +++PD++TFVG+LSACSHSG L GR+
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M Y + P +EHY C+ID+LG +G EA E+ MP E + V+W +LL A + H
Sbjct: 426 IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKH 485
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN +LAE AQ++ ++EP + G+YVL+SNIY G++E+V +R + + ++K PGCS
Sbjct: 486 GNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSS 545
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ +H FI D+ HP + IY L + +L E G
Sbjct: 546 IEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAG 583
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 172/371 (46%), Gaps = 43/371 (11%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+++ PF L +C A ++G++IH+ +L+ G TSLI+MY++ +
Sbjct: 63 NSYSFPFLLKSC-------AKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGL 115
Query: 84 KYALFVFNN------LSC------------------------EPNVFTYNAMISGFYSND 113
+ A VF+ +SC E +V ++NAMI+G+ N
Sbjct: 116 EDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENG 175
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL----GLDLDV 169
+ L+ F M + V PD+ T ++ C ++ +++H V G +
Sbjct: 176 RYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSL 235
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
I +AL++ Y KC +E A +FE L +DVV WN ++ GY + +AL +F+ M +
Sbjct: 236 KIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRS 295
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVG 287
G + T+ VL A +G GR +H + K G + + +LIDMY K +
Sbjct: 296 GECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIE 355
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F M + + SWN+++ G + LF RM +PD +TF +L ACS
Sbjct: 356 AAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS 415
Query: 348 HLAALMHGRQI 358
H L GRQI
Sbjct: 416 HSGLLDLGRQI 426
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 9/292 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRT----GIIDSPLSITSLINMYSKCCQMKYALF 88
T ++ + CA +++ G+++HS++ G S + +LI++YSKC ++ A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F LSC+ +V ++N +I G+ + + L F M + G P+ T ++ C +
Sbjct: 257 LFEGLSCK-DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315
Query: 149 AVLEVKKIHGLVFK--LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
A+ + IH + K G+ + + ++L++ Y KC +E A +VF + R + WNAM
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMG 265
+ G+A G + A ++F RM + T G+LSA G GR + +
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYN 435
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ +ID+ G EA E+ M E D W S++ ++ GN
Sbjct: 436 LTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN 487
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/559 (37%), Positives = 315/559 (56%), Gaps = 40/559 (7%)
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
YA+ VF + EPN +N M+ G+ + L + M LG+LP+ YTFP L+K C
Sbjct: 18 YAISVFATIQ-EPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSC 76
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE----------- 193
A E ++IHG V KLG + D+Y+ ++L++ Y + +E+A KVF+
Sbjct: 77 AKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136
Query: 194 --------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
E+P++DVV WNAM++GYA+ G + +ALE+F+ M K +
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRP 196
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T+ VLSA + GR VH + G+ S + ++NALID+Y K V A +F
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLF 256
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
E + KD+ SWN+++ + + L LF ML +G P+ VT ++LPAC+HL A+
Sbjct: 257 EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDV-FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GR IH YI + KD+ + + +L+DMY KCG + A VF M K ++S
Sbjct: 317 IGRWIHVYI-------DKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 369
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN MI G+ M G+ D+FS M + ++PD++TFVG+LSACSHSG L GR M
Sbjct: 370 WNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMT 429
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
Y + P +EHY C+ID+LG +G EA E+ MP E + V+W +LL A R HGN +LA
Sbjct: 430 QDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELA 489
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
E A+ + ++EP + G+YVL+SNIY G+++EV +R + + ++K PGCS IE+
Sbjct: 490 ESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSE 549
Query: 593 LHTFISSDRSHPEAKSIYA 611
+H FI D+ HP + IY
Sbjct: 550 VHEFIVGDKLHPRNREIYG 568
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 196/461 (42%), Gaps = 73/461 (15%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ CA ++GQ+IH ++L+ G TSLI+MY++ +++ A VF+ S
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 97 ----------------------------PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+V ++NAMISG+ + L+ F M +
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
V PD+ T ++ C +V +++H + G ++ I +AL++ Y KC +E A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+FE L +DVV WN ++ GY + + +AL +F+ M + G + T+ +L A +
Sbjct: 253 CGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312
Query: 249 GFFKNGRVVHGIVVKMGYD-SGVPVM-NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G GR +H + K D + P + +LIDMY K + A ++F M K + SWN+
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 372
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ G + LF RM G +PD +TF +L ACSH L GR I
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF------- 425
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
SM + K+ + MI G G
Sbjct: 426 --------------------------KSMTQDYDITPKLEH-----YGCMIDLLGHSGLF 454
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KEA +M M ++PD V + +L AC G L F
Sbjct: 455 KEAKEMIKTM---PMEPDGVIWCSLLKACRRHGNLELAESF 492
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 7/289 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L CA +++ G+++HS++ G + + +LI++YSKC Q++ A +F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LSC+ +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 259 LSCK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 153 VKKIHGLVFKLGLDLD--VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IH + K D+ + ++L++ Y KC +E A +VF + + + WNAM+ G+
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 377
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--S 268
A G + ++F RM K GI T G+LSA G GR + + + YD
Sbjct: 378 AMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ-DYDITP 436
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ +ID+ G EA E+ + M E D W S++ + GN
Sbjct: 437 KLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/650 (35%), Positives = 353/650 (54%), Gaps = 51/650 (7%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
P SS T++ Q N P T+ I CA++ +L+ ++H++MLRTG+ P S
Sbjct: 12 PISSNPTILTANNEQKSN-PSTVPILIDK---CANKKHLK---QLHAHMLRTGLFFDPPS 64
Query: 70 ITSLINM--YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-R 126
T L S + YA VF+ + PN++T+N +I F S+ +GL F M
Sbjct: 65 ATKLFTACALSSPSSLDYACKVFDQIP-RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLH 123
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ P+ YTFP +IK +V ++L + IHG+V K D++I ++L++ Y ++
Sbjct: 124 ESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLD 183
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A VF ++ +D+V WN+M++G+ Q G +AL++F+RM E +R T+ GVLSA
Sbjct: 184 SAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACA 243
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ GR + + G D + + NA++DMY K + +A +F+ MEEKDI SW +
Sbjct: 244 KRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTT 303
Query: 307 IMTVHEQCGNHDGTLRLFDRM--------------------------------LSAGFQP 334
++ + + G++D R+FD M L+ +P
Sbjct: 304 MIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKP 363
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VT ++ L AC+ L A+ G IH YI G+ N + +L+DMY+KCG
Sbjct: 364 NEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLN--------FHITTSLIDMYSKCGH 415
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A VF + ++DV W+ MI G M G G+ A+D+FS M E K+KP+ VTF +L A
Sbjct: 416 LEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCA 475
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSHSG + +GR F M YGVVP +HY C++D+LGRAG L EA EL MP +
Sbjct: 476 CSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSAS 535
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
VW LL A R++GN +LAE+A R+ + + + G YVL+SNIY GK++ V +R M+
Sbjct: 536 VWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMK 595
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ K PGCS IE+ +H F+ D SHP + IY++L + AR++ G
Sbjct: 596 VSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTG 645
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/588 (36%), Positives = 342/588 (58%), Gaps = 12/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + + G ++H ++ +G+ D SI SL++MYSKC + A +F +S
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGV-DFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RA 303
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+N MISG+ + + L FF M GVLPD TF L+ + K+IH
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ + + LD+++ SAL++ Y KC+ + A +F + DVV++ AM++GY G +
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+LE+FR + K I + T+ +L + ++ K GR +HG ++K G+D+ + A+I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A EIFE + ++DI SWNS++T Q N + +F +M +G D V
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L + G+ IHG+++ + LA DV+ + L+DMY KCG+++
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLAS--------DVYSESTLIDMYAKCGNLKA 595
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACS 456
A VF M +K++ SWN +I G G+ K++L +F M E + ++PD++TF+ ++S+C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G F M YG+ P EHY CV+D+ GRAG+L EAYE +MP + VW
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL A RLH N +LAE+A+ ++ L+P + G YVL+SN + ++E V +R M+++
Sbjct: 716 GTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PG SWIE+ H F+S D +HPE+ IY+ L+SL LR G
Sbjct: 776 EVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 250/495 (50%), Gaps = 11/495 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-P 97
LQ C++ L++G+++H++++ I + ++ MY+ C +F L
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ +N++IS F N + L F+ M GV PD TFPCL+K C + + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V LG+D + ++ S+L+ YL+ ++ K+F+ + +D V+WN M+NGYA+ G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ F M + I + T VLS G +HG+VV G D + N+L+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K +A ++F MM D +WN +++ + Q G + +L F M+S+G PD +
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAI 341
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TFS++LP+ S L + +QIH YI+ + ++ D+F+ +AL+D Y KC +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISL--------DIFLTSALIDAYFKCRGVSM 393
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ +F++ + DV + MI GY +G ++L+MF + + K+ P+E+T V +L
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L GRE + + G VIDM + G++N AYE+ + ++ + V W
Sbjct: 454 LLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL-SKRDIVSWN 511
Query: 518 TLLAASRLHGNTDLA 532
+++ N A
Sbjct: 512 SMITRCAQSDNPSAA 526
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 163/343 (47%), Gaps = 13/343 (3%)
Query: 117 KGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
K L N R L +P + + L++ C + + + K++H + + D Y +
Sbjct: 19 KSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI 76
Query: 176 VNTYLKCQFMEEALKVFEELPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+ Y C + K+F L LR + WN++++ + + G ++AL + +M G+
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T ++ A + + FK + V +G D V ++LI Y + + ++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + +KD WN ++ + +CG D ++ F M P+ VTF VL C+ +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG +VV+G+ GS K N+L+ MY+KCG DA +F MS+ D +W
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIK--------NSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
N MI GY G +E+L F M + + PD +TF +L + S
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L CA+ + G+ IH +M++ + S ++LI+MY+KC +K A+ VF + E
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-E 605
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLE-VK 154
N+ ++N++I+ ++ L F+ M + G+ PD+ TF +I CC V V E V+
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYAQI 213
+ G+ + +V+ + + + EA + + +P D +W ++
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA---- 721
Query: 214 GEFHKALEV 222
HK +E+
Sbjct: 722 CRLHKNVEL 730
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 320/575 (55%), Gaps = 42/575 (7%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ VF + EPN+ +N M G + L + M LG+LP+ YTFP L+K
Sbjct: 13 LPYAISVFETIQ-EPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLK 71
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C + A E +IHG V KLG +LD+Y+ ++L++ Y++ + +E+A KVF+
Sbjct: 72 SCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+P++DVV WNAM++GY + G + +ALE+F+ M K +
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ V+SA G + GR VH + G+ S + ++NALID Y K + A
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F + KD+ SWN ++ + + L LF ML +G P+ VT ++L AC+HL A
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 352 LMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ GR IH YI + G+ S + +L+DMY+KCG + A VF M K
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASS--------LRTSLIDMYSKCGDIEAAHQVFNSMLHKS 363
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+ +WN MI G+ M G+ A D+FS M + ++KPD++TFVG+LSACSH+G L GR
Sbjct: 364 LPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFR 423
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M Y + P +EHY C+ID+LG +G EA E+ M E + V+W +LL A ++HGN
Sbjct: 424 SMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNV 483
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+L E AQ +F++EP + G+YVL+SNIY G++ EV IR + + ++K PGCS IE+
Sbjct: 484 ELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEI 543
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H FI D+ HP + IY L + L+E G
Sbjct: 544 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAG 578
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 135/288 (46%), Gaps = 5/288 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + A +++ G+++HS++ G + + +LI+ YSKC +M+ A +F
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS + +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 256 LSYK-DVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314
Query: 153 VKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IH + K G+ + ++L++ Y KC +E A +VF + + + WNAM+ G+
Sbjct: 315 GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYDSG 269
A G + A ++F RM K I T G+LSA G GR + +
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPK 434
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ +ID+ G EA E+ M E D W S++ + GN
Sbjct: 435 LEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGN 482
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/650 (35%), Positives = 354/650 (54%), Gaps = 57/650 (8%)
Query: 15 FNFSTSSGNQTF----NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
F+F SS + + NHP SL L + LQ + IH+ M++ G+ ++ ++
Sbjct: 17 FHFLPSSSDPPYDSIRNHP--------SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYAL 68
Query: 71 TSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+ LI + + YA+ VF + EPN+ +N M G + L + M
Sbjct: 69 SKLIEFCILSPHFEGLPYAISVFKTIQ-EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ---- 183
LG+LP+ YTFP ++K C A E ++IHG V KLG DLD+Y+ ++L++ Y++
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 184 ---------------------------FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
++E A K+F+E+P++DVV WNAM++GYA+ G +
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F+ M K + T+ V+SA G + GR VH + G+ S + ++NAL
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
ID+Y K + A +FE + KD+ SWN+++ + + L LF ML +G P+
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
VT ++LPAC+HL A+ GR IH YI + G+ S + +L+DMY KCG
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS--------LRTSLIDMYAKCGD 419
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A VF + K ++SWN MI G+ M G+ + D+FS M + ++PD++TFVG+LSA
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSHSG L GR M Y + P +EHY C+ID+LG +G EA E+ M E + V
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W +LL A ++HGN +L E A+ + ++EP + G+YVL+SNIY + G++ EV R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ ++K PGCS IE+ +H FI D+ HP + IY L + L + G
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/649 (34%), Positives = 352/649 (54%), Gaps = 66/649 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L C ++ + + +H+ +++T L+++Y KC ++ A VF+++
Sbjct: 26 LDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNT 85
Query: 95 ------------------------CEP--NVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
C P + ++NAM+SGF D + L F M
Sbjct: 86 FSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSE 145
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
+ ++Y+F + C +M + +IHGL+ K LDVY+GSALV+ Y KC+ + A
Sbjct: 146 DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASA 205
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+ F+++ +R++V WN+++ Y Q G KALEVF RM GI T+ V SA +
Sbjct: 206 QRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASL 265
Query: 249 GFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME---------- 297
+ G +H V+K Y + + + NAL+DMY K + V EA +F+ M
Sbjct: 266 SAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSM 325
Query: 298 ---------------------EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
E+++ SWN+++ + Q G ++ +RLF + P
Sbjct: 326 VSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTH 385
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLA-KNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +L AC++LA L GRQ H +I+ +G K+G DI F+ N+L+DMY KCG +
Sbjct: 386 YTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDI---FVGNSLIDMYMKCGLV 442
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D ++VF +M ++D SWN MI+GY +G G EAL++F M + +PD VT +GVLSAC
Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSAC 502
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + +GR + M +G+VP +HYTC++D+LGRAG L+EA L MP E + VV
Sbjct: 503 SHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVV 562
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LLAA ++HGN L + A+R+ +++P + G YVL+SN+Y G++++V+ +R MRQ
Sbjct: 563 WGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V K PGCSWI ++ LH F+ D+ HP K IY L LT +++ G
Sbjct: 623 MGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVG 671
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 188/396 (47%), Gaps = 69/396 (17%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D F L+ C +V E + +H + K +++I + LV+ Y KC F+E+A KVF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 193 EE-------------------------------LPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ +P RD WNAMV+G+AQ F +AL
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
M E ++ ++ LSA + G +HG++ K Y V + +AL+DMY
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + V A F+ M+ ++I SWNS++T +EQ G L +F RM++ G +PD +T ++
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
V AC+ L+A+ G QIH ++ + +N D+ + NAL+DMY KC + +A++V
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRN-------DLVLGNALVDMYAKCRRVNEARLV 310
Query: 402 FTKMSKKD-------------------------------VASWNIMILGYGMDGQGKEAL 430
F +M +D V SWN +I GY +G+ +EA+
Sbjct: 311 FDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAV 370
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+F + + P TF +L+AC++ L GR+
Sbjct: 371 RLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 193/395 (48%), Gaps = 43/395 (10%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFN-HPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
M+S ++ + F F ++ F + ++ + +++ CA +L G +IH +
Sbjct: 122 MVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA---CAGLMDLSIGVQIHGLIA 178
Query: 60 RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
++ ++L++MYSKC + A F+++ N+ ++N++I+ + N A K L
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR-NIVSWNSLITCYEQNGPAGKAL 237
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNT 178
+ F M G+ PD+ T + C + A+ E +IH V K D+ +G+ALV+
Sbjct: 238 EVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDM 297
Query: 179 YLKCQFMEEALKVFEELPLRD-------------------------------VVLWNAMV 207
Y KC+ + EA VF+ +PLRD VV WNA++
Sbjct: 298 YAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALI 357
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY- 266
GY Q GE +A+ +F + +E IW + +T +L+A + K GR H ++K G+
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFW 417
Query: 267 -----DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
DS + V N+LIDMY K V + +FE M E+D SWN+++ + Q G L
Sbjct: 418 FKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEAL 477
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+F ML +G +PD VT VL ACSH + GR
Sbjct: 478 EIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGR 512
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/589 (35%), Positives = 337/589 (57%), Gaps = 10/589 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ L+ C H L++G+ +H+ M G+ T+L++MY+KC M+ AL VFN L
Sbjct: 310 VSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFN-LVK 368
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NV ++ AMI+GF + + FFN M + G+ P++ TF ++ C A+ + ++
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH + K G D + +AL++ Y KC + +A VFE + ++VV WNAM+ Y Q +
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEK 488
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ A+ F+ + KEGI T T +L+ + G+ V ++++ G++S + + NA
Sbjct: 489 YDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNA 548
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+ M+ + A+ +F M E+D+ SWN+I+ Q G + F M +G +PD
Sbjct: 549 LVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPD 608
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+TF+ +L AC+ AL GR++H I L C DV + L+ MYTKCGS+
Sbjct: 609 QITFTGLLNACASPEALTEGRRLHALITEAAL----DC----DVVVGTGLISMYTKCGSI 660
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA +VF + KK+V SW MI GY G+GKEAL++F M + +KPD +TFVG LSAC
Sbjct: 661 DDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSAC 720
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+H+G + +G M+ + + P +EHY C++D+ GRAG L+EA E M + + +
Sbjct: 721 AHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRL 779
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL A ++H + +LAE AQ+ +L+P G YV++SNIY A G ++EV +R M
Sbjct: 780 WGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLD 839
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PG SWIE+ +H F S D++HP+ + I+AEL L +++ G
Sbjct: 840 RGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLG 888
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/494 (31%), Positives = 265/494 (53%), Gaps = 11/494 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA N+ KG E+ S +L G T+LINM+ KC + AL VFNNL
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL 266
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ T+ +MI+G + + + F M + GV PDK F L+K C A+ +
Sbjct: 267 P-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + ++GLD ++Y+G+AL++ Y KC ME+AL+VF + R+VV W AM+ G+AQ
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A F +M + GI +R T +L A K GR +H ++K GY + V
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+ MY K + +A +FE + ++++ +WN+++T + Q +D + F +L G +
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD TF+++L C AL G+ + I+ G D+ + NAL+ M+ CG
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFES--------DLHIRNALVSMFVNCG 557
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A +F M ++D+ SWN +I G+ G+ + A D F M E+ +KPD++TF G+L+
Sbjct: 558 DLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLN 617
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+ L++GR L+ + + + T +I M + G +++A+ + +P + N
Sbjct: 618 ACASPEALTEGRRLHALI-TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK-NV 675
Query: 514 VVWRTLLAASRLHG 527
W +++ HG
Sbjct: 676 YSWTSMITGYAQHG 689
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/494 (31%), Positives = 259/494 (52%), Gaps = 11/494 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLC NL G+ IH+++ + I LI+MY+KC A +F+ + + +
Sbjct: 111 LQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMP-DKD 169
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V+++N ++ G+ + + M Q GV PDKYTF ++ C D V + ++
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFS 229
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L+ G D D+++G+AL+N ++KC +++ALKVF LP RD++ W +M+ G A+ +F +
Sbjct: 230 LILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQ 289
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +F+ M +EG+ + +L A + G+ VH + ++G D+ + V AL+
Sbjct: 290 ACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLS 349
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +ALE+F +++ +++ SW +++ Q G + F++M+ +G +P+ VT
Sbjct: 350 MYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVT 409
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L ACS +AL GRQIH I+ G I D + AL+ MY KCGS+ DA
Sbjct: 410 FMSILGACSRPSALKQGRQIHDRIIKAGY--------ITDDRVRTALLSMYAKCGSLMDA 461
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF ++SK++V +WN MI Y + A+ F + + +KPD TF +L+ C
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+ L+ R G + ++ M G L A L MP E + V W T
Sbjct: 522 DALELGKWVQSLI-IRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNT 579
Query: 519 LLAASRLHGNTDLA 532
++A HG A
Sbjct: 580 IIAGFVQHGENQFA 593
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 208/408 (50%), Gaps = 10/408 (2%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ T+ L++ C + + ++IH + + D+++ + L++ Y KC A ++F+
Sbjct: 104 RQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFD 163
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P +DV WN ++ GY Q + +A + +M ++G+ ++T +L+A
Sbjct: 164 EMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDK 223
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G + +++ G+D+ + V ALI+M+ K V +AL++F + +D+ +W S++T +
Sbjct: 224 GGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLAR 283
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
LF M G QPD V F ++L AC+H AL G+++H + GL
Sbjct: 284 HRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDT---- 339
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
++++ AL+ MYTKCGSM DA VF + ++V SW MI G+ G+ +EA F
Sbjct: 340 ----EIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFF 395
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+ M E+ ++P+ VTF+ +L ACS L QGR+ + + G + T ++ M +
Sbjct: 396 NKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI-IKAGYITDDRVRTALLSMYAK 454
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
G L +A + ++ N V W ++ A H D A Q + +
Sbjct: 455 CGSLMDARNV-FERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 16/388 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C+ + L++G++IH +++ G I T+L++MY+KC + A VF +
Sbjct: 409 TFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERI 468
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + NV +NAMI+ + ++ + F + + G+ PD TF ++ C A+
Sbjct: 469 S-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG 527
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K + L+ + G + D++I +ALV+ ++ C + A+ +F ++P RD+V WN ++ G+ Q
Sbjct: 528 KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQH 587
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
GE A + F+ M + G+ + T TG+L+A GR +H ++ + D V V
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVG 647
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
LI MY K + +A +F + +K+++SW S++T + Q G L LF +M G +
Sbjct: 648 TGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVK 707
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNN--ALMDMYT 390
PD +TF L AC+H ++ GL S KD + + M + ++D++
Sbjct: 708 PDWITFVGALSACAHAG-----------LIKEGLHHFESMKDFNIEPRMEHYGCMVDLFG 756
Query: 391 KCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ G + +A KM K D W ++
Sbjct: 757 RAGLLHEAVEFINKMQVKPDSRLWGALL 784
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 160/329 (48%), Gaps = 10/329 (3%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NA +N ++ G+ +A+ V + I + R T + +L I +G +H +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ + N LI MY K A +IF+ M +KD++SWN ++ + Q ++ RL
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
++M+ G +PD TF +L AC+ + G ++ I+ G D+F+
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDT--------DLFVGT 244
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL++M+ KCG + DA VF + ++D+ +W MI G Q K+A ++F M E ++P
Sbjct: 245 ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+V FV +L AC+H L QG+ M+ G+ I T ++ M + G + +A E+
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKE-VGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ N V W ++A HG + A
Sbjct: 364 -FNLVKGRNVVSWTAMIAGFAQHGRMEEA 391
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 152/281 (54%), Gaps = 10/281 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFN 91
+T + L +C L+ G+ + S ++R G +S L I +L++M+ C + A+ +FN
Sbjct: 509 STFTSILNVCKSPDALELGKWVQSLIIRAGF-ESDLHIRNALVSMFVNCGDLMSAMNLFN 567
Query: 92 NLSCEPNVFTYNAMISGFYS---NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
++ E ++ ++N +I+GF N FAF D+F M++ GV PD+ TF L+ C
Sbjct: 568 DMP-ERDLVSWNTIIAGFVQHGENQFAF---DYFKMMQESGVKPDQITFTGLLNACASPE 623
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ E +++H L+ + LD DV +G+ L++ Y KC +++A VF LP ++V W +M+
Sbjct: 624 ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GYAQ G +ALE+F +M +EG+ T G LSA G K G + +
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKDFNIEP 743
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIM 308
+ ++D++G+ + EA+E M+ K D W +++
Sbjct: 744 RMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALL 784
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 340/587 (57%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + L G ++H + G+ +DSP++ T L+ MYSKC ++ A +F+ S +
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVSCGLELDSPVANT-LLAMYSKCQCLQAARKLFDT-SPQS 223
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ ++N +ISG+ N + F M G+ PD TF + C +++++ K+IH
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIH 283
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + + + LDV++ SAL++ Y KC+ +E A K+ + D V+ M++GY G+
Sbjct: 284 GYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNK 343
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+ALE FR + +E + + T + + A + G+ +HG ++K D V +A++
Sbjct: 344 EALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAIL 403
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A +F + EKD WNS++T Q G + LF +M G + D V
Sbjct: 404 DMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCV 463
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L AL +G++IHG ++ L D++ ++L+DMY KCG++
Sbjct: 464 SISGALSACANLPALHYGKEIHGLMIKGPLR--------SDLYAESSLIDMYAKCGNLNF 515
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ VF +M +++ SWN +I YG G KE L +F M ++PD VTF+G++SAC H
Sbjct: 516 SRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGH 575
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G + LM YG+ +EHY CV DM GRAG+L+EA+E +MP + VW
Sbjct: 576 AGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWG 635
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A +HGN +LAE+A++ +F L+P + G YVL++N+ GK+ +VL +R M+++
Sbjct: 636 TLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERG 695
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
VRK PG SWIE+ + H F+++D SHP IY+ L SL L++ G
Sbjct: 696 VRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 234/459 (50%), Gaps = 25/459 (5%)
Query: 76 MYSKCCQMKYA--LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
MY + +K A LF L C +N MI GF L F+ M GV PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTS---AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPD 57
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
KYTFP ++K CC + +V K +H V +GL DV++GS+L+ Y + + +A +F+
Sbjct: 58 KYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFD 117
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P +D VLWN M+NGY + G+ A+++F M I + T VLS
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +HGI V G + PV N L+ MY K +C+ A ++F+ + D+ SWN I++ + Q
Sbjct: 178 GTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQ 237
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LF M+SAG +PD +TF++ LP + L +L H ++IHGYI+ + +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV------ 291
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ DVF+ +AL+D+Y KC + AQ + + S D MI GY ++G+ KEAL+ F
Sbjct: 292 --VLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAF 349
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC-----VI 488
+ + ++KP VTF + A + L+ G+E ++ T C ++
Sbjct: 350 RWLVQERMKPTSVTFSSIFPAFAGLAALNLGKEL------HGSIIKTKLDEKCHVGSAIL 403
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
DM + G+L+ A + E + + W +++ + +G
Sbjct: 404 DMYAKCGRLDLACRV-FNRITEKDAICWNSMITSCSQNG 441
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 265/541 (48%), Gaps = 16/541 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C +++ G+ +H + G+ + +SLI +Y++ + A ++F+N+ + +
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDS 124
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N M++G+ N + + F MR + P+ TF C++ C + ++HG
Sbjct: 125 VL-WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ GL+LD + + L+ Y KCQ ++ A K+F+ P D+V WN +++GY Q G +
Sbjct: 184 IAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGE 243
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +FR M GI T L + + K+ + +HG +++ V + +ALID
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K + V A +I D ++++ + G + L F ++ +P VT
Sbjct: 304 IYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS++ PA + LAAL G+++HG I+ L + + +A++DMY KCG + A
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKLD--------EKCHVGSAILDMYAKCGRLDLA 415
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF ++++KD WN MI +G+ EA+++F M + D V+ G LSAC++
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+E LM + + + + +IDM + G LN + + M E N V W +
Sbjct: 476 PALHYGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM-QERNEVSWNS 533
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQ 575
+++A HG DL E A L G ++V I A G+ +E + H M +
Sbjct: 534 IISAYGNHG--DLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591
Query: 576 Q 576
+
Sbjct: 592 E 592
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L CA+ L G+EIH M++ + + +SLI+MY+KC + ++ VF+ + E
Sbjct: 467 GALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-E 525
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKK 155
N ++N++IS + ++ + L F+ M + G+ PD TF +I C V E ++
Sbjct: 526 RNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMV 207
H + + G+ + + + + + + ++EA + +P D +W ++
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLL 638
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 351/618 (56%), Gaps = 20/618 (3%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
IN F + TF+ ++ C A++ +++G+++H + + G
Sbjct: 236 INLFKQMLELGIKPNSYTFS---SILKCFAAV------ARVEEGRQVHGLICKLGFNSYN 286
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+ SLI+ Y +++ A +F+ L+ + +V ++N+MISG+ N +G++ F M
Sbjct: 287 TVVNSLISFYFVGRKVRCAQKLFDELT-DRDVISWNSMISGYVKNGLDDRGIEIFIKMLV 345
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFME 186
GV D T + C ++ +L K +H K LD +V + L++ Y KC +
Sbjct: 346 FGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLN 405
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A++VFE + + VV W +M+ GY + G A+++F M G+ + VT +L+A
Sbjct: 406 SAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACA 465
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ G K+G++VH + + ++ V NAL DMY K + +A ++F M++KD+ SWN+
Sbjct: 466 INGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNT 525
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + + + L LF M +PD T + +LPAC+ LAAL GR+IHGY + NG
Sbjct: 526 MIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNG 584
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ +D ++ NA++DMY KCG + A+ +F + KD+ SW +MI GYGM G G
Sbjct: 585 YS--------EDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYG 636
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
EA++ F+ M ++PDEV+F+ +L ACSHSG L +G + +M+ + P +EHY C
Sbjct: 637 SEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYAC 696
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+L R G L +A++ AMP + + +W LL R+H + LAE A+R+F+LEP +
Sbjct: 697 MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPEN 756
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
G YVL++NIY K+EEV +R + Q+ ++KNPGCSWIE+K ++ F++ D S P+A
Sbjct: 757 TGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQA 816
Query: 607 KSIYAELHSLTARLREHG 624
K I L L ++++E G
Sbjct: 817 KKIELLLKRLRSKMKEEG 834
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 174/502 (34%), Positives = 271/502 (53%), Gaps = 13/502 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
N F L + LQLCA + +++ G+ + S + +G++ + L+ MY KC +K
Sbjct: 145 NSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEG 204
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
VF+ LS E +F +N MIS + + + ++ F M +LG+ P+ YTF ++KC
Sbjct: 205 RMVFDKLS-ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAA 263
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
V V E +++HGL+ KLG + + ++L++ Y + + A K+F+EL RDV+ WN+M
Sbjct: 264 VARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSM 323
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG- 265
++GY + G + +E+F +M G+ + T+ V A +G G+V+H +K
Sbjct: 324 ISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAAT 383
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
D V N L+DMY K + A+ +FE M+EK + SW S++T + + G DG ++LFD
Sbjct: 384 LDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFD 443
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M S G PD+ +++L AC+ L G+ +H YI N L N F++NAL
Sbjct: 444 EMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNS--------FVSNAL 495
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
DMY KCGSM+DA VF+ M KKDV SWN MI GY + EAL +F+ M + + KPD
Sbjct: 496 TDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESKPDG 554
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
T +L AC+ L +GRE + R G V+DM + G L A L
Sbjct: 555 TTVACILPACASLAALDKGRE-IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFD 613
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
+PN+ + V W ++A +HG
Sbjct: 614 MIPNK-DLVSWTVMIAGYGMHG 634
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/630 (34%), Positives = 343/630 (54%), Gaps = 41/630 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYA 86
P+ L SL L ++ LQ ++IHS +++TG+ ++ +++ LI S + YA
Sbjct: 22 PYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYA 81
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
L +F + PN +N MI G S++ F L+++ HM G P++YTFP + K C
Sbjct: 82 LSLFKTIR-NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTK 140
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ----------------------- 183
+ E K++H V KLGL+ + ++ ++L+N Y +
Sbjct: 141 IRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTAL 200
Query: 184 --------FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
F++EA ++F+E+P+RDVV WNAM++GYAQ G +A+ F M + + +
Sbjct: 201 ITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNV 260
Query: 236 FTVTGVLSALIMMGF-FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T+ VLSA G + G V + G S + ++N LIDMY K + EA +FE
Sbjct: 261 STMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFE 320
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+++K++ SWN ++ + + L LF RM+ + P+ VTF ++LPAC++L AL
Sbjct: 321 KIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDL 380
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+ +H Y+ N + + V + +L+DMY KCG + A+ +F M+ K +A+WN
Sbjct: 381 GKWVHAYVDKNMKSMKNT------VALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWN 434
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G+ M G AL +FS M PD++TFVGVL+AC H+G LS GR + M
Sbjct: 435 AMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQD 494
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
Y V P + HY C+ID+ GRAG +EA L M + + +W +LL A R+H +LAE
Sbjct: 495 YKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAES 554
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
A+ +F+LEP + YVL+SNIY G++E+V IR + ++K PGCS IE+ +H
Sbjct: 555 VAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVH 614
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F+ D+ HP++ IY L + RL + G
Sbjct: 615 EFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/598 (35%), Positives = 346/598 (57%), Gaps = 15/598 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLC +L+KG+EIH ++ G + +T+++++Y+KC Q+ A +F + +
Sbjct: 152 LQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQ-HKD 210
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ +++G+ N A + L M++ G PD T ++ D+ A+ + IHG
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
F+ G + V + +AL++ Y KC A VF+ + + VV WN M++G AQ GE +
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A F +M EG +R T+ GVL A +G + G VH ++ K+ DS V VMN+LI
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLIS 390
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A IF +E+ ++ +WN+++ + Q G L LF M S G + D T
Sbjct: 391 MYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFT 449
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
V+ A + + + IHG V +C D ++VF++ AL+DMY KCG+++ A
Sbjct: 450 LVGVITALADFSVNRQAKWIHGLAV-------RACMD-NNVFVSTALVDMYAKCGAIKTA 501
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F M ++ V +WN MI GYG G GKE LD+F+ M + +KP+++TF+ V+SACSHS
Sbjct: 502 RKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHS 561
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
GF+ +G M+ Y + PT++HY+ ++D+LGRAGQL++A+ MP + V
Sbjct: 562 GFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGA 621
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N +L E AAQ++F+L+P G +VL++NIY + +++V +R M + +
Sbjct: 622 MLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGL 681
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
K PGCSW+EL++ +HTF S +HPE+K IYA L +L ++ AG + D DS
Sbjct: 682 HKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIK-----AAGYVPDPDS 734
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/490 (28%), Positives = 247/490 (50%), Gaps = 12/490 (2%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
S+ L + T+ ++ +I ++++ G + L T +I+++ K A VF ++ +
Sbjct: 50 SVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V Y+ M+ G+ N L FF M V + CL++ C + + + + ++IH
Sbjct: 110 DVL-YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIH 168
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL+ G + ++++ +A+++ Y KC+ ++ A K+FE + +D+V W +V GYAQ G
Sbjct: 169 GLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAK 228
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++ +M + G T+ +L A+ M + GR +HG + G++S V V NAL+
Sbjct: 229 RALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALL 288
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K A +F+ M K + SWN+++ Q G + F +ML G P V
Sbjct: 289 DMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRV 348
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T VL AC++L L G +H + L N V + N+L+ MY+KC +
Sbjct: 349 TMMGVLLACANLGDLERGWFVHKLLDKLKLDSN--------VSVMNSLISMYSKCKRVDI 400
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +F + K +V +WN MILGY +G KEAL++F M +K D T VGV++A +
Sbjct: 401 AASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALAD 459
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
Q + ++ + R + + T ++DM + G + A +L M E + + W
Sbjct: 460 FSVNRQAK-WIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKL-FDMMQERHVITWN 517
Query: 518 TLLAASRLHG 527
++ HG
Sbjct: 518 AMIDGYGTHG 527
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 337/592 (56%), Gaps = 9/592 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA + + G ++H + L++ + T+ ++MY+KC +M A VFN
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNT 299
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L P +YNA+I G+ D K LD F +++ + D+ + + C + LE
Sbjct: 300 LPNPPRQ-SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLE 358
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++HGL K GL ++ + + +++ Y KC + EA +FEE+ RD V WNA++ + Q
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQ 418
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
E K L +F M + + FT V+ A G +HG ++K G V
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFV 478
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+AL+DMYGK + EA +I +EEK SWNSI++ + R F +ML G
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGI 538
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD T++TVL C+++A + G+QIH I+ L DV++ + L+DMY+KC
Sbjct: 539 IPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHS--------DVYIASTLVDMYSKC 590
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+M+D++++F K K+D +W+ MI Y G G++A+++F M +KP+ F+ VL
Sbjct: 591 GNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVL 650
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC+H G++ +G + M S YG+ P +EHY+C++D+LGR+GQ+NEA +L +MP EA+
Sbjct: 651 RACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEAD 710
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
V+WRTLL+ ++ GN ++AE A + QL+P YVL++N+Y G + EV +R
Sbjct: 711 DVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSI 770
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ ++K PGCSWIE++D +HTF+ D++HP ++ IY + H L ++ G
Sbjct: 771 MKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/499 (29%), Positives = 259/499 (51%), Gaps = 11/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT L+ C+ + G ++H ++ G + ++ ++L++MYSKC ++ A
Sbjct: 135 PHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFR 194
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + E N+ ++A+I+G+ ND +GL F M ++G+ + T+ + + C +
Sbjct: 195 VFREMP-ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLS 253
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A ++HG K D IG+A ++ Y KC+ M +A KVF LP +NA++
Sbjct: 254 AFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIV 313
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GYA+ + KAL++F+ + + + +++G L+A ++ G +HG+ VK G
Sbjct: 314 GYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGF 373
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N ++DMYGK + EA IFE ME +D SWN+I+ HEQ TL LF ML
Sbjct: 374 NICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ +PD T+ +V+ AC+ AL +G +IHG I+ +G+ D F+ +AL+DM
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGL--------DWFVGSALVDM 485
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + +A+ + ++ +K SWN +I G+ Q + A FS M E + PD T+
Sbjct: 486 YGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTY 545
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL C++ + G++ + + + + + ++DM + G + ++ + P
Sbjct: 546 ATVLDVCANMATIELGKQIHAQI-LKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604
Query: 509 NEANPVVWRTLLAASRLHG 527
+ V W ++ A HG
Sbjct: 605 KR-DYVTWSAMICAYAYHG 622
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 260/533 (48%), Gaps = 46/533 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
LQ C++ L G+++H+ M+ TG + + L+ Y K +M YA VF+ +
Sbjct: 13 LQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDV 72
Query: 95 --------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
E +V ++N+++S + N K ++ F MR L
Sbjct: 73 ISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSL 132
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
+ D TF ++K C + ++H L ++G + DV GSALV+ Y KC+ +++A
Sbjct: 133 KIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDA 192
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+VF E+P R++V W+A++ GY Q F + L++F+ M K G+ +S+ T V + +
Sbjct: 193 FRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGL 252
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
FK G +HG +K + + A +DMY K + + +A ++F + S+N+I+
Sbjct: 253 SAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAII 312
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + L +F + D ++ S L ACS + + G Q+HG V GL
Sbjct: 313 VGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLG 372
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
N + + N ++DMY KCG++ +A ++F +M ++D SWN +I + + + +
Sbjct: 373 FN--------ICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCV 487
L +F M + ++PD+ T+ V+ AC+ L+ G E +++S G+ + + +
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG--SAL 482
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+DM G+ G L EA ++ A E V W ++++ ++ AQR F
Sbjct: 483 VDMYGKCGMLMEAEKIH-ARLEEKTTVSWNSIISGFSSQKQSE----NAQRYF 530
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 196/420 (46%), Gaps = 41/420 (9%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K TF +++ C ++ A+ K++H + G +Y+ + L+ Y K M A KVF+
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 194 ELPLRDV-------------------------------VLWNAMVNGYAQIGEFHKALEV 222
+P RDV V WN++++ Y G K++E+
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F RM I T +L A + + G VH + ++MG+++ V +AL+DMY K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + +A +F M E+++ W++++ + Q L+LF ML G T+++V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+C+ L+A G Q+HG+ + + A D + A +DMY KC M DA VF
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAY--------DSIIGTATLDMYAKCERMFDAWKVF 297
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ S+N +I+GY QG +ALD+F + L DE++ G L+ACS
Sbjct: 298 NTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHL 357
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G + L + + G+ I ++DM G+ G L EA + M + V W ++AA
Sbjct: 358 EGIQ-LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERR-DAVSWNAIIAA 415
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 207/450 (46%), Gaps = 31/450 (6%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N F + +L C+ +G ++H ++ G+ + ++++MY KC +
Sbjct: 332 QRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGAL 391
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A +F + + ++NA+I+ N+ K L F M + + PD +T+ ++K
Sbjct: 392 MEACLIFEEME-RRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKA 450
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C A+ +IHG + K G+ LD ++GSALV+ Y KC + EA K+ L + V W
Sbjct: 451 CAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSW 510
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N++++G++ + A F +M + GI +T VL M + G+ +H ++K
Sbjct: 511 NSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILK 570
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ S V + + L+DMY K + ++ +FE ++D +W++++ + G + + L
Sbjct: 571 LQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINL 630
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHG---------------RQIHGYIVVNGLA 368
F+ M +P+ F +VL AC+H+ + G + H +V+ L
Sbjct: 631 FEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLG 690
Query: 369 KNGSCK-----------DIDDVFMNNALMDMYTKCGSMRDAQMVFT---KMSKKDVASWN 414
++G + DDV L + + G++ A+ F ++ +D +++
Sbjct: 691 RSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQ-GNVEVAEKAFNSLLQLDPQDSSAYV 749
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
++ Y + G E M S M KLK +
Sbjct: 750 LLANVYAIVGMWGEVAKMRSIMKNCKLKKE 779
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 332/578 (57%), Gaps = 12/578 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ +E+H + + G I +LI+MY+KC + A VF+ + C+ +V ++NAMI
Sbjct: 250 LEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMIG 308
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N + F M+Q G +PD T+ L+ A VK++H ++GL
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVS 368
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+ +GSA V+ Y++C +++A +F++L +R+V WNAM+ G AQ +AL +F +M
Sbjct: 369 DLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMR 428
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EG + T +LSA + + + VH + G + V NAL+ MY K
Sbjct: 429 REGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTM 487
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ M E+++ +W +++ Q G LF +ML G PD T+ ++L AC+
Sbjct: 488 YAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA 547
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
AL +++H + V GL + D+ + NAL+ MY KCGS+ DA+ VF M +
Sbjct: 548 STGALEWVKEVHSHAVNAGL--------VSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR-E 466
+DV SW +MI G G+G +ALD+F M KP+ +FV VLSACSH+G + +GR +
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQ 659
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
FL L + YG+ PT+EHYTC++D+LGRAGQL EA L MP E W LL A +
Sbjct: 660 FLSLTQD-YGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTY 718
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN ++AE AA+ +L+P YVL+SNIY A G +E+ L +R M+++ +RK PG SW
Sbjct: 719 GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSW 778
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ + +H+F+ D SHPE+K IYA+L L RL+ G
Sbjct: 779 IEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEG 816
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 220/423 (52%), Gaps = 11/423 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L+ C +L+ G++IH++++++G T+L+NMY KC + A +F+ +
Sbjct: 32 TYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKM 91
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++ MI G + F M++ G +P+ YT+ ++ A+ V
Sbjct: 92 -VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV 150
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H GL LD+ +G+ALV+ Y K +++A VF+ + RD+ W M+ G AQ
Sbjct: 151 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQH 210
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVL--SALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A +F +M + G + T +L SA+ G + + VH K G+ S +
Sbjct: 211 GRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLR 270
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NALI MY K + +A +F+ M ++D+ SWN+++ Q G +F +M G
Sbjct: 271 VGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F PD T+ ++L A +++H + V GL + D+ + +A + MY +
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGL--------VSDLRVGSAFVHMYIR 382
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DAQ++F K++ ++V +WN MI G G+EAL +F M PD TFV +
Sbjct: 383 CGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNI 442
Query: 452 LSA 454
LSA
Sbjct: 443 LSA 445
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/420 (29%), Positives = 208/420 (49%), Gaps = 12/420 (2%)
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
MI G+ +A + ++ MR+ G P++ T+ ++K CC +++ KKIH + + G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DV + +ALVN Y+KC +++A +F+++ R+V+ W M+ G A G +A F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+M +EG + +T +L+A G + + VH V G + V NAL+ MY K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL- 343
+ +A +F+ M E+DIFSW ++ Q G LF +M G P+L T+ ++L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 344 -PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
A + AL +++H + G I D+ + NAL+ MY KCGS+ DA++VF
Sbjct: 241 ASAITSTGALEWVKEVHKHA--------GKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
M +DV SWN MI G +G G EA +F M + PD T++ +L+ +G
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+E + G+V + + + M R G +++A +L N W ++
Sbjct: 353 WVKE-VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDA-QLIFDKLAVRNVTTWNAMIGG 410
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L+ +E+HS+ + G++ +L++MY+KC + A VF+++
Sbjct: 538 TYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM 597
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V+++ MI G + LD F M+ G P+ Y+F ++ C V E
Sbjct: 598 -LERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEG 656
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYA 211
++ L G++ + + +V+ + +EEA +P+ W A++
Sbjct: 657 RRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACV 716
Query: 212 QIGEFHKA 219
G A
Sbjct: 717 TYGNLEMA 724
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 360/631 (57%), Gaps = 24/631 (3%)
Query: 1 MLSKISRINPFSSC---FNFSTSSGNQTFNHPFT-LATCIASLQLCAHQTNLQKGQEIHS 56
+++++++ FS F SSG + ++ F+ ++ +SL+ ++ G+++H
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR------SVHGGEQLHG 219
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF 116
++L++G + SL+ Y K ++ A VF+ ++ E +V ++N++I+G+ SN A
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAE 278
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
KGL F M G+ D T + C D + + +H + K + + L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y KC ++ A VF E+ R VV + +M+ GYA+ G +A+++F M +EGI +
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
TVT VL+ G+ VH + + +G+D + V NAL+DMY K + EA +F
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFS 456
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
M KDI SWN+I+ + + + L LF+ +L F PD T + VLPAC+ L+A
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GR+IHGYI+ NG D + N+L+DMY KCG++ A M+F ++ KD+ SW
Sbjct: 517 KGREIHGYIMRNGY--------FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+MI GYGM G GKEA+ +F+ M +A ++ DE++FV +L ACSHSG + +G F +M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ PT+EHY C++DML R G L +AY MP + +W LL R+H + LAE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A++VF+LEP + G YVLM+NIY K+E+V +R + Q+ +RKNPGCSWIE+K +
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ F++ D S+PE ++I A L + AR+ E G
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 256/501 (51%), Gaps = 17/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYAL 87
P TL + LQLCA +L+ G+E+ +++ G +IDS L + L MY+ C +K A
Sbjct: 94 PRTLCSV---LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG-SKLSLMYTNCGDLKEAS 149
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + E +F M S DF+ + F M GV D YTF C+ K +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+V +++HG + K G +G++LV YLK Q ++ A KVF+E+ RDV+ WN+++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
NGY G K L VF +M GI + T+ V + GR VH I VK +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
N L+DMY K + A +F M ++ + S+ S++ + + G ++LF+ M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD+ T + VL C+ L G+++H +I N L D+F++NALMD
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--------DIFVSNALMD 440
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEV 446
MY KCGSM++A++VF++M KD+ SWN +I GY + EAL +F+ + E K PDE
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VL AC+ +GRE + R G ++DM + G L A+ L
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 507 MPNEANPVVWRTLLAASRLHG 527
+ ++ + V W ++A +HG
Sbjct: 560 IASK-DLVSWTVMIAGYGMHG 579
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 197/391 (50%), Gaps = 12/391 (3%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T +++ C D ++ + K++ + G +D +GS L Y C ++EA +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+ + + WN ++N A+ G+F ++ +F++M G+ M +T + V + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG ++K G+ V N+L+ Y K + V A ++F+ M E+D+ SWNSI+ +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G + L +F +ML +G + DL T +V C+ + GR +H V +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV-------KA 325
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C +D F N L+DMY+KCG + A+ VF +MS + V S+ MI GY +G EA+ +
Sbjct: 326 CFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDML 491
F M E + PD T VL+ C+ L +G+ + E+ G + + ++DM
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMY 442
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G + EA EL + + + W T++
Sbjct: 443 AKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 360/631 (57%), Gaps = 24/631 (3%)
Query: 1 MLSKISRINPFSSC---FNFSTSSGNQTFNHPFT-LATCIASLQLCAHQTNLQKGQEIHS 56
+++++++ FS F SSG + ++ F+ ++ +SL+ ++ G+++H
Sbjct: 15 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR------SVHGGEQLHG 68
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF 116
++L++G + SL+ Y K ++ A VF+ ++ E +V ++N++I+G+ SN A
Sbjct: 69 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAE 127
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
KGL F M G+ D T + C D + + +H + K + + L+
Sbjct: 128 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 187
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y KC ++ A VF E+ R VV + +M+ GYA+ G +A+++F M +EGI +
Sbjct: 188 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 247
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
TVT VL+ G+ VH + + +G+D + V NAL+DMY K + EA +F
Sbjct: 248 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFS 305
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
M KDI SWN+I+ + + + L LF+ +L F PD T + VLPAC+ L+A
Sbjct: 306 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 365
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GR+IHGYI+ NG D + N+L+DMY KCG++ A M+F ++ KD+ SW
Sbjct: 366 KGREIHGYIMRNGY--------FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+MI GYGM G GKEA+ +F+ M +A ++ DE++FV +L ACSHSG + +G F +M
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 477
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ PT+EHY C++DML R G L +AY MP + +W LL R+H + LAE
Sbjct: 478 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 537
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A++VF+LEP + G YVLM+NIY K+E+V +R + Q+ +RKNPGCSWIE+K +
Sbjct: 538 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 597
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ F++ D S+PE ++I A L + AR+ E G
Sbjct: 598 NIFVAGDSSNPETENIEAFLRKVRARMIEEG 628
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 168/332 (50%), Gaps = 12/332 (3%)
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+E+ + + WN ++N A+ G+F ++ +F++M G+ M +T + V + +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
G +HG ++K G+ V N+L+ Y K + V A ++F+ M E+D+ SWNSI+ +
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G + L +F +ML +G + DL T +V C+ + GR +H V
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV-------K 173
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
+C +D F N L+DMY+KCG + A+ VF +MS + V S+ MI GY +G EA+
Sbjct: 174 ACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 232
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDM 490
+F M E + PD T VL+ C+ L +G+ + E+ G + + ++DM
Sbjct: 233 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDM 290
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G + EA EL + + + W T++
Sbjct: 291 YAKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 321
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/636 (35%), Positives = 354/636 (55%), Gaps = 57/636 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
+ CA+ ++L G +H+ + R+G + ++++MY KC +++A +F++L
Sbjct: 266 FKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI 325
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKK 155
++ ++N+++S + A L F+ M ++ PD + ++ C + A L ++
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG + GL DV++G+A+V+ Y KC MEEA KVF+ + +DVV WNAMV GY+Q G
Sbjct: 386 VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGR 445
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGV---------------------------------- 241
AL +F RM++E I + T T V
Sbjct: 446 LEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVS 505
Query: 242 -LSALIMMGFFKNGRVVHGIVVKM-----GYDSG---VPVMNALIDMYGKGKCVGEALEI 292
LSA + +G +G+ H +K G D G + V+N LIDMY K + A ++
Sbjct: 506 LLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565
Query: 293 FEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM--LSAGFQPDLVTFSTVLPACSH 348
F+ + +++D+ +W ++ + Q G+ + L+LF M + +P+ T S L AC+
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
LAAL GRQ+H Y++ N GS +F+ N L+DMY+K G + AQ+VF M ++
Sbjct: 626 LAALRFGRQVHAYVLRNFY---GSVM----LFVANCLIDMYSKSGDVDTAQIVFDNMPQR 678
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
+ SW ++ GYGM G+G++AL +F M + L PD +TF+ VL ACSHSG + G F
Sbjct: 679 NAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFF 738
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
M +GV P EHY C++D+ GRAG+L EA +L MP E PVVW LL+A RLH N
Sbjct: 739 NRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSN 798
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
+L E AA R+ +LE G+ G+Y L+SNIY ++++V IR+TM++ ++K PGCSWI+
Sbjct: 799 VELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQ 858
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ G+ TF DRSHP+++ IY L L R++ G
Sbjct: 859 GRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIG 894
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 250/516 (48%), Gaps = 53/516 (10%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPN-VFTYNAMISGFYSNDFAFKGLDFFNHMRQLG 129
T+LI Y YA+ + L P+ VF +N +I + M+ LG
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
PD YTFP + K C ++ ++ +H V + G +V++ +A+V+ Y KC + A
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAH 314
Query: 190 KVFEEL---PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR--FTVTGVLSA 244
+F++L ++D+V WN++V+ Y + + AL +F +M+ + MS ++ +L A
Sbjct: 315 NMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHL-MSPDVISLVNILPA 373
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ GR VHG ++ G V V NA++DMY K + EA ++F+ M+ KD+ SW
Sbjct: 374 CASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSW 433
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSA---------------------------------- 330
N+++T + Q G + L LF+RM
Sbjct: 434 NAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
Query: 331 -GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P++VT ++L AC + AL+HG++ H Y + L +G DD+ + N L+DMY
Sbjct: 494 CGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMY 553
Query: 390 TKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEALDMFSCM--CEAKLKPDE 445
KC S A+ +F +S K DV +W +MI GY G AL +FS M + +KP++
Sbjct: 554 AKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPND 613
Query: 446 VTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
T L AC+ L GR+ ++ + YG V + C+IDM ++G ++ A +
Sbjct: 614 FTLSCALVACARLAALRFGRQVHAYVLRNFYGSV-MLFVANCLIDMYSKSGDVDTAQIVF 672
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
MP + N V W +L+ +HG + A RVF
Sbjct: 673 DNMP-QRNAVSWTSLMTGYGMHGRGE----DALRVF 703
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 138/316 (43%), Gaps = 23/316 (7%)
Query: 276 LIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
LI Y A+ + E + +F WN ++ G+ L+ +M S G+
Sbjct: 197 LIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWT 256
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD TF V AC++L++L G +H + +G A N VF+ NA++ MY KCG
Sbjct: 257 PDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASN--------VFVCNAVVSMYGKCG 308
Query: 394 SMRDAQMVFTKMSKK---DVASWNIMILGYGMDGQGKEALDMFSCMCEAKL-KPDEVTFV 449
++R A +F + + D+ SWN ++ Y AL +F M L PD ++ V
Sbjct: 309 ALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLV 368
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L AC+ +GR+ + R G+V + V+DM + G++ EA ++ M
Sbjct: 369 NILPACASLAASLRGRQ-VHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKF 427
Query: 510 EANPVVWRTLLA----ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+ + V W ++ A RL L E + +L+ + + Y G+ E
Sbjct: 428 K-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD---VVTWTAVITGYAQRGQGCE 483
Query: 566 VLDIRHTMRQQNVRKN 581
LD+ M R N
Sbjct: 484 ALDVFRQMCDCGSRPN 499
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/585 (35%), Positives = 345/585 (58%), Gaps = 12/585 (2%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVF 100
L H + + +IH+ ++ +G+++S +T +N ++ YA VF+ EP+VF
Sbjct: 77 LLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFP-EPSVF 135
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGL 159
+NA+I G+ S++F ++ ++ M+ GV PD +T PC++K C V VLEV K++HG
Sbjct: 136 LWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGV-PVLEVGKRVHGQ 194
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
+F+LG + DV++ + LV Y KC +E+A VFE L R++V W +M++GY Q G +A
Sbjct: 195 IFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEA 254
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
L +F +M + + + VL A + + G+ +HG VVKMG + ++ +L M
Sbjct: 255 LRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAM 314
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K V A F+ ME ++ WN++++ + + G + + LF M+S + D +T
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ + AC+ + +L + + YI + +DVF+N AL+DM+ KCGS+ A+
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYI--------NKTEYRNDVFVNTALIDMFAKCGSVDLAR 426
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF + KDV W+ MI+GYG+ G+G++A+D+F M +A + P++VTFVG+L+AC+HSG
Sbjct: 427 EVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSG 486
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G E M+ YG+ +HY CV+D+LGR+G LNEAY+ MP E VW L
Sbjct: 487 LVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGAL 545
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L A +++ + L E AA+++F L+P + G+YV +SN+Y + ++ V +R MR++ +
Sbjct: 546 LGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLS 605
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K+ G S IE+ L F D+SHP K I+ EL SL RL+E G
Sbjct: 606 KDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAG 650
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 191/392 (48%), Gaps = 19/392 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL C+ L+ C+ L+ G+ +H + R G L+ +Y+KC +++ A V
Sbjct: 170 FTLP-CV--LKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIV 226
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L + N+ ++ +MISG+ N + L F MRQ V PD +++ DV
Sbjct: 227 FEGLD-DRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVED 285
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + K IHG V K+GL+ + + +L Y KC + A F+++ + +V++WNAM++G
Sbjct: 286 LEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISG 345
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ G ++A+ +F+ M + I TV + A +G + + + K Y +
Sbjct: 346 YAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRND 405
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V ALIDM+ K V A E+F+ +KD+ W++++ + G + LF M
Sbjct: 406 VFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQ 465
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIH---GYIVVNGLAKNGSCKDIDDVFMNNALM 386
AG P+ VTF +L AC+H + G ++ Y + ++ +C ++
Sbjct: 466 AGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYAC-----------VV 514
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
D+ + G + +A T M + V+ W ++
Sbjct: 515 DLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 339/587 (57%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + L G ++H + G+ +DSP++ T L+ MYSKC ++ A +F+ L +
Sbjct: 166 LSVCASEAMLDLGTQLHGIAVGCGLELDSPVANT-LLAMYSKCQCLQAARKLFDTLP-QS 223
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ ++N +ISG+ N + F M G+ PD TF + C +++++ K+IH
Sbjct: 224 DLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIH 283
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + + + LDV++ SAL++ Y KC+ +E A K + D V+ M++GY G+
Sbjct: 284 GYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNK 343
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+ALE FR + +E + + T + + A + G+ +HG ++K D V +A++
Sbjct: 344 EALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAIL 403
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A +F + EKD WNS++T Q G + LF +M G + D V
Sbjct: 404 DMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCV 463
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L AL +G++IHG ++ L D++ ++L+DMY KCG++
Sbjct: 464 SISGALSACANLPALHYGKEIHGLMIKGPLR--------SDLYAESSLIDMYAKCGNLNF 515
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ VF +M +K+ SWN +I YG G KE L +F M ++PD VTF+G++SAC H
Sbjct: 516 SRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGH 575
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G + LM YG+ +EHY CV DM GRAG+L+EA+E +MP + VW
Sbjct: 576 AGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWG 635
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A +HGN +LAE+A++ +F L+P + G YVL++N+ GK+ +VL +R M+++
Sbjct: 636 TLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERG 695
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
VRK PG SWIE+ + H F+++D SHP IY+ L SL L++ G
Sbjct: 696 VRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEG 742
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 234/459 (50%), Gaps = 25/459 (5%)
Query: 76 MYSKCCQMKYA--LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
MY + +K A LF L C +N MI GF L F+ M GV PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTS---AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPD 57
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
KYTFP ++K CC + +V K +H V +GL DV++GS+L+ Y + + +A +F+
Sbjct: 58 KYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFD 117
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P +D VLWN M+NGY + G+ A+++F M I + T VLS
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +HGI V G + PV N L+ MY K +C+ A ++F+ + + D+ SWN I++ + Q
Sbjct: 178 GTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQ 237
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LF M+SAG +PD +TF++ LP + L +L H ++IHGYI+ + +
Sbjct: 238 NGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV------ 291
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ DVF+ +AL+D+Y KC + AQ + S D MI GY ++G+ KEAL+ F
Sbjct: 292 --VLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAF 349
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC-----VI 488
+ + ++KP VTF + A + L+ G+E ++ T C ++
Sbjct: 350 RWLVQERMKPTSVTFSSIFPAFAGLAALNLGKEL------HGSIIKTKLDEKCHVGSAIL 403
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
DM + G+L+ A + E + + W +++ + +G
Sbjct: 404 DMYAKCGRLDLACRV-FNRITEKDAICWNSMITSCSQNG 441
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 265/541 (48%), Gaps = 16/541 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C +++ G+ +H + G+ + +SLI +Y++ + A ++F+N+ + +
Sbjct: 65 VKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDS 124
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N M++G+ N + + F MR + P+ TF C++ C + ++HG
Sbjct: 125 VL-WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG 183
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ GL+LD + + L+ Y KCQ ++ A K+F+ LP D+V WN +++GY Q G +
Sbjct: 184 IAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGE 243
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +FR M GI T L + + K+ + +HG +++ V + +ALID
Sbjct: 244 AEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALID 303
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K + V A + D ++++ + G + L F ++ +P VT
Sbjct: 304 IYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVT 363
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS++ PA + LAAL G+++HG I+ L + + +A++DMY KCG + A
Sbjct: 364 FSSIFPAFAGLAALNLGKELHGSIIKTKLD--------EKCHVGSAILDMYAKCGRLDLA 415
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF ++++KD WN MI +G+ EA+++F M + D V+ G LSAC++
Sbjct: 416 CRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANL 475
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+E LM + + + + +IDM + G LN + + M E N V W +
Sbjct: 476 PALHYGKEIHGLM-IKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM-QEKNEVSWNS 533
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQ 575
+++A HG DL E A L G ++V I A G+ +E + H M +
Sbjct: 534 IISAYGNHG--DLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591
Query: 576 Q 576
+
Sbjct: 592 E 592
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L CA+ L G+EIH M++ + + +SLI+MY+KC + ++ VF+ + E
Sbjct: 467 GALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ-E 525
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKK 155
N ++N++IS + ++ + L F+ M + G+ PD TF +I C V E ++
Sbjct: 526 KNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRY 585
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMV 207
H + + G+ + + + + + + + EA + +P D +W ++
Sbjct: 586 YHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLL 638
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 336/594 (56%), Gaps = 13/594 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA + L+ G ++H + L+T + T+ ++MY KC + A +FN+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L N+ +YNA+I G+ +D + L F +++ G+ D+ + + C + LE
Sbjct: 336 LP-NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++HGL K ++ + +A+++ Y KC + EA VFEE+ RD V WNA++ + Q
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGV 270
G K L +F M + G+ FT VL A G +H ++K +G DS V
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFV 514
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ ALIDMY K + +A ++ + + E+ + SWN+I++ + + F +ML
Sbjct: 515 GI--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G PD T++T+L C++L + G+QIH I+ L D ++++ L+DMY+
Sbjct: 573 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS--------DAYISSTLVDMYS 624
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG+M+D Q++F K +D +WN M+ GY G G+EAL +F M +KP+ TF+
Sbjct: 625 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 684
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL AC H G + +G + M S YG+ P +EHY+CV+D++GR+GQ+++A EL MP E
Sbjct: 685 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 744
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ V+WRTLL+ ++HGN ++AE AA + QLEP YVL+SNIY G + EV +R
Sbjct: 745 ADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLR 804
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR ++K PGCSWIE+K +H F+ D++HP +K IY L LT ++ G
Sbjct: 805 KMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 858
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 264/499 (52%), Gaps = 13/499 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T L+ C+ + G +IH ++ G ++ ++L++MY+KC ++ ++
Sbjct: 172 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQF 231
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ E N +++A+I+G ND GL+ F M++ GV + TF + + C + A
Sbjct: 232 FHSMP-EKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSA 290
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++HG K DV IG+A ++ Y+KC + +A K+F LP ++ +NA++ G
Sbjct: 291 LRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVG 350
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ + +AL +FR + K G+ + +++G A ++ G VHG+ +K S
Sbjct: 351 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSN 410
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NA++DMYGK + EA +FE M +D SWN+I+ HEQ GN + TL LF ML
Sbjct: 411 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 470
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G +PD T+ +VL AC+ AL G +IH I+ + L D F+ AL+DMY
Sbjct: 471 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL--------DSFVGIALIDMY 522
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCG M A+ + +++++ V SWN +I G+ + Q +EA FS M E + PD T+
Sbjct: 523 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 582
Query: 450 GVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+L C++ + G++ +++ I + ++DM + G + + + P
Sbjct: 583 TILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAP 640
Query: 509 NEANPVVWRTLLAASRLHG 527
N + V W ++ HG
Sbjct: 641 NR-DFVTWNAMVCGYAQHG 658
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/566 (26%), Positives = 279/566 (49%), Gaps = 53/566 (9%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
I+PFSS +T + +TF+H F Q C+ + L G++ H+ M+ T +
Sbjct: 29 ISPFSS--YQATPTKKKTFSHIF---------QECSDRKALCPGKQAHARMILTEFKPTV 77
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLS------------------------------CEP 97
LI MY KC +++A VF+ + E
Sbjct: 78 FVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER 137
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++N++ISG+ N K +D F M ++G + D+ TF ++K C + +IH
Sbjct: 138 DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIH 197
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL K+G D DV GSAL++ Y KC+ ++ +++ F +P ++ V W+A++ G Q +
Sbjct: 198 GLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLR 257
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F+ M K G+ +S+ T V + + + G +HG +K + + V + A +
Sbjct: 258 GGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATL 317
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A ++F + ++ S+N+I+ + + L +F + +G D V
Sbjct: 318 DMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 377
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S AC+ + + G Q+H GL+ C+ ++ + NA++DMY KCG++ +
Sbjct: 378 SLSGAFRACAVIKGDLEGLQVH------GLSMKSLCQ--SNICVANAILDMYGKCGALVE 429
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +VF +M +D SWN +I + +G ++ L +F M ++ ++PDE T+ VL AC+
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 489
Query: 458 SGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L+ G E +++SR G+ + +IDM + G + +A +L + E V W
Sbjct: 490 WQALNCGMEIHNRIIKSRLGLDSFVG--IALIDMYSKCGMMEKAEKLHDRLA-EQTVVSW 546
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQL 542
+++ L ++ A+ ++ ++
Sbjct: 547 NAIISGFSLQKQSEEAQKTFSKMLEM 572
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 339/621 (54%), Gaps = 53/621 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQM 83
NHP SL L + LQ + IH+ M++TG+ ++ +++ L+ + +
Sbjct: 2 NHP--------SLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGL 53
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA+ VF + EPN+ +N M G + + + M LG+LP+ YTFP L+K
Sbjct: 54 PYAISVFETIQ-EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKS 112
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ-------------------- 183
C + E ++IHG V KLG +LD+Y+ ++L++ Y+K
Sbjct: 113 CAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172
Query: 184 -----------FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++E A K+F+E+P++DVV WNA+++GYA G +AL++F+ M K +
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ V+SA G + GR VH + G S + ++NALID+Y K V A +
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ + KD+ SWN+++ + + L LF ML +G P+ VT ++LPAC+ L A+
Sbjct: 293 FQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAI 352
Query: 353 MHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
GR IH YI + G+ S + +L+DMY KCG + A VF M + +
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASS--------LRTSLIDMYAKCGDIEAAHQVFNSMHHRTL 404
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
++ N MI G+ M G+ A D+FS M + ++PD++TFVG+LSACSHSG L GR
Sbjct: 405 SACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRS 464
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M Y + P +EHY C+ID+LG G EA E+ M E + V+W +LL A ++HGN +
Sbjct: 465 MTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVE 524
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AQ++ ++EP + G+YVL+SNIY G++ EV +IR + + ++K PGCS IE+
Sbjct: 525 LGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEID 584
Query: 591 DGLHTFISSDRSHPEAKSIYA 611
+H FI D+ HP + IY
Sbjct: 585 SVVHEFIIGDKFHPRNREIYG 605
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 339/621 (54%), Gaps = 53/621 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN---MYSKCCQM 83
NHP SL L LQ + IH+ M++TG+ ++ +++ L+ + +
Sbjct: 2 NHP--------SLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGL 53
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA+ VF+ + EP + +N M G + L + M LG+LP+ YTFP L+K
Sbjct: 54 PYAISVFDTIQ-EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKS 112
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV------------ 191
C A E +++HG V K G DLD+YI ++L++ Y++ +E+A KV
Sbjct: 113 CAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSY 172
Query: 192 -------------------FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
F+E+P++DVV WNA ++GYA+ G + +ALE+F++M K +
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR 232
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ VLSA G + GR VH + G+ + ++NALID+Y K + A +
Sbjct: 233 PDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGL 292
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ + KD+ SWN+++ + + L LF ML +G +P+ VT ++L AC+HL A+
Sbjct: 293 FQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAI 352
Query: 353 MHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
GR IH YI + G+ S + +L+DMY KCG + AQ VF M + +
Sbjct: 353 DIGRWIHVYIDKRLKGVTNASS--------LRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+SWN MI G+ M G+ A D+FS M + ++PD++TFVG+LSACSHSG L GR
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M Y ++P +EHY C+ID+ G +G EA ++ M E + V+W +LL A ++HGN +
Sbjct: 465 MTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVE 524
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AQ + ++EP + G+YVL+SNIY ++ EV R + + ++K PGCS IE+
Sbjct: 525 LGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEID 584
Query: 591 DGLHTFISSDRSHPEAKSIYA 611
+H FI D+ HP + IY
Sbjct: 585 SVVHEFIIGDKFHPRNREIYG 605
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 342/604 (56%), Gaps = 14/604 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA + + G ++H + L++ + T+ ++MY+KC +M A VFN
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L P +YNA+I G+ D K L+ F +++ + D+ + + C + LE
Sbjct: 300 LPNPPRQ-SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE 358
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++HGL K GL ++ + + +++ Y KC + EA +F+++ RD V WNA++ + Q
Sbjct: 359 GIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQ 418
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
E K L +F M + + FT V+ A G +HG +VK G V
Sbjct: 419 NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFV 478
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+AL+DMYGK + EA +I + +EEK SWNSI++ + R F +ML G
Sbjct: 479 GSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGV 538
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD T++TVL C+++A + G+QIH I+ L DV++ + L+DMY+KC
Sbjct: 539 IPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHS--------DVYIASTLVDMYSKC 590
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+M+D++++F K K+D +W+ MI Y G G++A+ +F M +KP+ F+ VL
Sbjct: 591 GNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVL 650
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC+H G++ +G + +M+S YG+ P +EHY+C++D+LGR+ Q+NEA +L +M EA+
Sbjct: 651 RACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEAD 710
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
V+WRTLL+ ++ GN ++AE A + QL+P YVL++N+Y G + EV IR
Sbjct: 711 DVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSI 770
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
M+ ++K PGCSWIE++D +HTF+ D++HP ++ IY + H L ++ AG +
Sbjct: 771 MKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMK-----WAGYVP 825
Query: 633 DSDS 636
D DS
Sbjct: 826 DIDS 829
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 267/520 (51%), Gaps = 13/520 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT L+ C+ + G ++H ++ G + ++ ++L++MYSKC ++ A
Sbjct: 135 PHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFR 194
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F + E N+ ++A+I+G+ ND +GL F M ++G+ + T+ + + C +
Sbjct: 195 IFREMP-ERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLS 253
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A ++HG K D IG+A ++ Y KC M +A KVF LP +NA++
Sbjct: 254 AFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIV 313
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GYA+ + KALE+F+ + + + +++G L+A ++ G +HG+ VK G
Sbjct: 314 GYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGF 373
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N ++DMYGK + EA IF+ ME +D SWN+I+ HEQ TL LF ML
Sbjct: 374 NICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSML 433
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ +PD T+ +V+ AC+ AL +G +IHG IV +G+ D F+ +AL+DM
Sbjct: 434 RSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGL--------DWFVGSALVDM 485
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + +A+ + ++ +K SWN +I G+ Q + A FS M E + PD T+
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTY 545
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL C++ + G++ + + + + + ++DM + G + ++ + P
Sbjct: 546 ATVLDVCANMATIELGKQIHAQI-LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604
Query: 509 NEANPVVWRTLLAASRLHGNTDLA--EIAAQRVFQLEPGH 546
+ V W ++ A HG+ + A ++ ++P H
Sbjct: 605 KR-DYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNH 643
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 253/533 (47%), Gaps = 46/533 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
LQ C++ L G++ H+ M+ T + + L+ Y K M YA VF+ +
Sbjct: 13 LQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDV 72
Query: 95 --------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
E +V ++N+++S + N K ++ F MR L
Sbjct: 73 ISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSL 132
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
+ D TF ++K C + ++H L ++G + DV GSALV+ Y KC+ ++ A
Sbjct: 133 KIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGA 192
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++F E+P R++V W+A++ GY Q F + L++F+ M K G+ +S+ T V + +
Sbjct: 193 FRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGL 252
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
FK G +HG +K + + A +DMY K + +A ++F + S+N+I+
Sbjct: 253 SAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAII 312
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + L +F + D ++ S L ACS + + G Q+HG V GL
Sbjct: 313 VGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLG 372
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
N + + N ++DMY KCG++ +A +F M ++D SWN +I + + + +
Sbjct: 373 FN--------ICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCV 487
L +F M + ++PD+ T+ V+ AC+ L+ G E +++S G+ + + +
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--SAL 482
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+DM G+ G L EA ++ + E V W ++++ ++ AQR F
Sbjct: 483 VDMYGKCGMLMEAEKIHDRL-EEKTTVSWNSIISGFSSQKQSE----NAQRYF 530
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 195/420 (46%), Gaps = 41/420 (9%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K+TF +++ C ++ A+ K+ H + +Y+ + LV Y K M A KVF+
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 194 ELP-------------------------------LRDVVLWNAMVNGYAQIGEFHKALEV 222
+P RDVV WN++++ Y G K++E+
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F RM I T + VL A + + G VH + ++MG+++ V +AL+DMY K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + A IF M E+++ W++++ + Q L+LF ML G T+++V
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+C+ L+A G Q+HG+ + + A D + A +DMY KC M DA VF
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAY--------DSIIGTATLDMYAKCDRMSDAWKVF 297
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ S+N +I+GY QG +AL++F + L DE++ G L+ACS
Sbjct: 298 NTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHL 357
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G + L + + G+ I ++DM G+ G L EA + M + V W ++AA
Sbjct: 358 EGIQ-LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERR-DAVSWNAIIAA 415
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 335/595 (56%), Gaps = 12/595 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF--- 90
C+A+L CA L G EIH ++++ G+ +++LI MY KC +K A VF
Sbjct: 144 ACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERI 203
Query: 91 -NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+N N+ +N MI G+ SN+ L+ F M +LG+ PD T ++ C ++
Sbjct: 204 RDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLD 263
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K+IHGL+ LGLD DV +G+AL+ Y KC E +L++F+ ++V+W +++
Sbjct: 264 LAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLN 323
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AQ G ++ALE F + + + L A + G +HG +KMG+DS
Sbjct: 324 CAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSD 383
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V AL+D YGK + A ++F + +D+ SWN++++ Q D L+ F M S
Sbjct: 384 VFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQS 443
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+P+ VT + +L C+HL+ ++ +++H Y++ + N +NN+L+ Y
Sbjct: 444 KQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNA--------LVNNSLISAY 495
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + ++ VF K+ ++ +WN ++LG+GM G+ E F M EA +KPD TF
Sbjct: 496 AKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFT 555
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LS+CSHSG + G ++ M Y + P +E YTC++D+LGRAG LN+AY+L ++MP
Sbjct: 556 SLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPC 615
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ +W +LLA+ + HGNT LAE+ A +F+L+ G VL++N+Y G EV +
Sbjct: 616 SPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRV 675
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R ++Q ++K PGCSWIE+ + +H F++ D SH + IYA + SL+ ++ G
Sbjct: 676 RTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRVG 730
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 152/510 (29%), Positives = 242/510 (47%), Gaps = 22/510 (4%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
++ KG++IH ++L+ G + SL+ MY KC A+ +F + E + ++N MI
Sbjct: 54 DVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME-ERDSVSWNTMI 112
Query: 107 SGFYSNDFAFKGLDFFNHMRQL--GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
SGF + K L F M + G ++ + C + + +IHG + K G
Sbjct: 113 SGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKG 172
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFE-----ELPLRDVVLWNAMVNGYAQIGEFHKA 219
+D D ++ SAL+ Y+KC ++ A VFE EL R++ +WN M+ GY A
Sbjct: 173 VDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLA 232
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
LE+F M + GI TV VL + G+ +HG+++ +G D V V AL++M
Sbjct: 233 LELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEM 292
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-MLSAGFQPDLVT 338
Y K +L+IF+ + ++ W S+M Q G + L F ML GF PD V
Sbjct: 293 YFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGF-PDPVI 351
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
L ACS L+ G IHG+ + G DVF+ AL+D Y KCG M A
Sbjct: 352 LLAALRACSFLSLKPRGMAIHGFAIKMGFDS--------DVFVGGALVDFYGKCGDMEYA 403
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q VF +S +D+ SWN +I G+ + EAL F M ++KP+ VT +LS C+H
Sbjct: 404 QQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHL 463
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ +E + + + + + +I + G ++ + + +P N V W +
Sbjct: 464 SVMILCKEVHCYLLRHWFETNALVNNS-LISAYAKCGDIHSSRTVFEKLPVR-NEVTWNS 521
Query: 519 LLAASRLHGNTD--LAEIAAQRVFQLEPGH 546
+L +HG TD A + ++P H
Sbjct: 522 ILLGFGMHGRTDEMFATFEKMKEANIKPDH 551
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 191/395 (48%), Gaps = 21/395 (5%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
FPCLIK + V + K+IHG + K G D+++ ++L+ Y KC A+ +FE +
Sbjct: 42 FPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERME 101
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNG 254
RD V WN M++G+ Q G++ K+L +FRRM KE G + +R LS+ + +G
Sbjct: 102 ERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHG 161
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-----WNSIMT 309
+HG +VK G DS +++ALI+MY K + A +FE + + ++ WN ++
Sbjct: 162 LEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMIL 221
Query: 310 --VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
V +C + L LF ML G PD T VL CS L L G+QIHG I+ GL
Sbjct: 222 GYVSNECLSL--ALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGL 279
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DDV + ALM+MY KCG + +F + ++ W ++L +G
Sbjct: 280 D--------DDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPN 331
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EAL+ FS PD V + L ACS +G + + G + +
Sbjct: 332 EALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMA-IHGFAIKMGFDSDVFVGGAL 390
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+D G+ G + A ++ + + V W L++
Sbjct: 391 VDFYGKCGDMEYAQQVFYGLSTR-DLVSWNALISG 424
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/587 (35%), Positives = 352/587 (59%), Gaps = 11/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + + G ++H ++ +G+ +DSP++ T L+ MY+KC + A +F+ + +
Sbjct: 255 LSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT-LLAMYAKCGHLFDARRLFDMMP-KT 312
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ T+N MISG+ N F + F+ M + PD TF + + + + K+IH
Sbjct: 313 DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIH 372
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ + G+ LDV++ SAL++ Y KC+ +E A K+F++ D+V+ AM++GY G +
Sbjct: 373 CYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNN 432
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
ALE+FR + +E + + T+ VL A + G+ +HG ++K G+ V +A++
Sbjct: 433 NALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIM 492
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A + F + +KD WNS++T Q G + + LF +M AG + D V
Sbjct: 493 DMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCV 552
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L AL +G++IH +++ D+F +AL+DMY+KCG++
Sbjct: 553 SISAALSACANLPALHYGKEIHAFMMRGAFRS--------DLFAESALIDMYSKCGNLDL 604
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF M +K+ SWN +I YG G+ K++L++F M ++PD VTF+ ++SAC H
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G + M G++ +EHY C++D+ GRAG+LNEA+ + +MP + VW
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A RLHGN +LAE+A++ +F L+P + G YVL+SN++ G++E VL IR M+++
Sbjct: 725 TLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 784
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PGCSWI++ + H F+++DRSHP++ IY L +L LR+ G
Sbjct: 785 VQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEG 831
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 272/507 (53%), Gaps = 31/507 (6%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS- 94
++ LQ C + L +G++ H+ ML GI + + T L+ MY C A +F L
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 95 --CEPNVFTYNAMISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
EP +N MI GF DFA L F+ M G LPDKYTFP +IK C + +
Sbjct: 110 WCSEP----WNWMIRGFTMMGQFDFA---LLFYFKMLGCGTLPDKYTFPYVIKACGGLNS 162
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V + +H + +G +LDV++GS+L+ Y + + +A +F+ +P +D VLWN M+NG
Sbjct: 163 VALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL---IMMGFFKNGRVVHGIVVKMGY 266
Y + G++ A VF M + + T VLS IM+ F G +HG+VV G
Sbjct: 223 YVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINF---GSQLHGLVVSSGL 279
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ PV N L+ MY K + +A +F+MM + D+ +WN +++ + Q G D LF
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M+SA +PD +TFS+ LP S A L G++IH YI+ NG++ DVF+ +AL+
Sbjct: 340 MISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSL--------DVFLKSALI 391
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
D+Y KC + A+ +F + + D+ MI GY ++G AL++F + + +++ + V
Sbjct: 392 DIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 451
Query: 447 TFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
T VL AC+ L+ G+E ++++ +G + + ++DM + G+L+ A++ +
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFI 509
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLA 532
+ ++ + V W +++ + +G + A
Sbjct: 510 GISDK-DAVCWNSMITSCSQNGKPEEA 535
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G+E+H ++L+ G S +++++MY+KC ++ A F +
Sbjct: 452 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 511
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + + +N+MI+ N + +D F M G D + + C ++ A+
Sbjct: 512 S-DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 570
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + + D++ SAL++ Y KC ++ A +VF+ + ++ V WN+++ Y
Sbjct: 571 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 630
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G +L +F M +GI T ++SA G G + ++G + +
Sbjct: 631 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 690
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
++D++G+ + EA + M D W +++ GN
Sbjct: 691 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGN 735
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 344/633 (54%), Gaps = 44/633 (6%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMK 84
N P T + L +L++ ++ H +M+RTG P S + L M S ++
Sbjct: 22 NQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLE 81
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA VF+ + +PN F +N +I + S D F + + + P+KYTFP LIK
Sbjct: 82 YARKVFDEIP-KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
+V ++ + +HG+ K + DV++ ++L++ Y C ++ A KVF + +DVV W
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M+NG+ Q G KALE+F++M E + S T+ GVLSA + + GR V + +
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD----------------------- 300
+ + + NA++DMY K + +A +F+ MEEKD
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 301 --------IFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAA 351
I +WN++++ +EQ G + L +F + L + + +T + L AC+ + A
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GR IH YI +G+ N + +AL+ MY+KCG + ++ VF + K+DV
Sbjct: 381 LELGRWIHSYIKKHGIRMN--------FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
W+ MI G M G G EA+DMF M EA +KP+ VTF V ACSH+G + + M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
ES YG+VP +HY C++D+LGR+G L +A + AMP + VW LL A ++H N +L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
AE+A R+ +LEP + G +VL+SNIY GK+E V ++R MR ++K PGCS IE+
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+S D +HP ++ +Y +LH + +L+ +G
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/562 (37%), Positives = 315/562 (56%), Gaps = 42/562 (7%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA VF + EPN +N MI G + L + M LG+LP+ YTFP L+K
Sbjct: 14 LPYATSVFETIQ-EPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLK 72
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C E ++IHG V KLG DLD+Y+ ++L++ Y++ +E+A KVF+
Sbjct: 73 SCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVS 132
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+P++DVV WNAM++GYA+ G + +ALE+F M K +
Sbjct: 133 YTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T VLSA G + GR VH V G+DS + ++NALID+Y K V A
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ + KD+ SWN+++ + + L LF ML +G P+ VT +VLPAC+HL A
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 352 LMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ GR IH YI + G+ S + +L+DMY KCG + A VF M K
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASS--------LRTSLIDMYAKCGDIEAAHQVFNSMLHKS 364
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
++SWN MI G+ M G+ + D+FS M + ++PD++TFVG+LSACSHSG L GR
Sbjct: 365 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFR 424
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M Y + P +EHY C+ID+LG +G EA E+ M E + V+W +LL A ++HGN
Sbjct: 425 SMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNV 484
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+LAE AQ + ++EP + +Y+L+SNIY + G++E+V IR + + ++K PGCS IE+
Sbjct: 485 ELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEV 544
Query: 590 KDGLHTFISSDRSHPEAKSIYA 611
+ F+ D+ HP+ + IY
Sbjct: 545 DSVVFEFVVGDKFHPQNREIYG 566
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 204/476 (42%), Gaps = 80/476 (16%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
++ PF L +C A +GQ+IH +L+ G TSLI+MY + ++
Sbjct: 63 NSYTFPFLLKSC-------AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRL 115
Query: 84 KYALFVFNNLSCE------------------------------PNVFTYNAMISGFYSND 113
+ A VF+ S +V ++NAMISG+
Sbjct: 116 EDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETG 175
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L+ F M ++ V PD+ T+ ++ C ++ +++H V G D ++ I +
Sbjct: 176 CYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVN 235
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y KC +E A +F+ L +DV+ WN ++ GY + + +AL +F+ M + G
Sbjct: 236 ALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 295
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T+ VL A +G GR +H + K G + + +LIDMY K + A +
Sbjct: 296 NDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 355
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F M K + SWN+++ G D + LF RM G +PD +TF +L ACSH
Sbjct: 356 VFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGM 415
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GR I + + KM+ K +
Sbjct: 416 LDLGRHIFRSMTQD-------------------------------------YKMTPK-LE 437
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ MI G G KEA +M + M +++PD V + +L AC G + F
Sbjct: 438 HYGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELAESF 490
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 171/378 (45%), Gaps = 33/378 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFN 91
+T + L CAH +++ G+++HS++ G DS L I +LI++YSKC +++ A +F
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGF-DSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
LS + +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 256 GLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314
Query: 152 EVKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ IH + K G+ + ++L++ Y KC +E A +VF + + + WNAM+ G
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYDS 268
+A G + ++F RM K GI T G+LSA G GR + +
Sbjct: 375 FAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTP 434
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ +ID+ G EA E+ ME E D W S++ + GN +
Sbjct: 435 KLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE--------- 485
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-AKNGSCKDIDDV--FMNNA 384
L+ F +L+ P+ YI+++ + A G +D+ + +N
Sbjct: 486 LAESFAQNLIKIEPENPS--------------SYILLSNIYASAGRWEDVARIRALLNGK 531
Query: 385 LMDMYTKCGSMRDAQMVF 402
M C S+ +VF
Sbjct: 532 CMKKVPGCSSIEVDSVVF 549
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/579 (37%), Positives = 321/579 (55%), Gaps = 44/579 (7%)
Query: 47 NLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+L+ + +HS ++ + +S L + L+ Y+ + A VF+ + E NV N M
Sbjct: 55 DLKTLRTVHSRIISEDLRYNSSLGV-KLMRAYASLKDVATARKVFDEIP-ERNVIIINVM 112
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I + +N F +G+ F M V PD YTFPC++K C ++ KKIHG K+GL
Sbjct: 113 IRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGL 172
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+++G+ LV+ Y KC F+ EA V +E+ RDVV WN++V GYAQ F ALEV R
Sbjct: 173 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCRE 232
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M I T+ +L A+ S N MY K
Sbjct: 233 MESVKISHDAGTMASLLPAV----------------------SNTTTENV---MYVK--- 264
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
++F M +K + SWN ++ V+ + + L+ M + GF+PD V+ ++VLPA
Sbjct: 265 -----DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPA 319
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C +AL G++IHGYI L I ++ + NAL+DMY KCG + A+ VF M
Sbjct: 320 CGDTSALSLGKKIHGYIERKKL--------IPNLLLENALIDMYAKCGCLDRARDVFENM 371
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+DV SW MI YG G+G +A+ +FS M ++ L PD + FV L+ACSH+G L +GR
Sbjct: 372 KSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGR 431
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
LM Y + P +EH C++D+LGRAG++ EAY+ MP E N VW LL A R+
Sbjct: 432 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRV 491
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
H NTD+ +AA ++FQL P G YVL+SNIY G++EEV +IR+ M+ + ++KNPG S
Sbjct: 492 HSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 551
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+E+ +HTF+ DRSHP++ IY EL L +++E G
Sbjct: 552 NVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELG 590
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ N+ G++IH + G+ + L++MY KC + A V + +S +
Sbjct: 148 LKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRD 206
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++++G+ N L+ M + + D T L+ + V +
Sbjct: 207 VVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKD 265
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ FK+G + +V WN M+ Y + +
Sbjct: 266 MFFKMG--------------------------------KKSLVSWNVMIGVYMKNAMPVE 293
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E++ M +G ++T VL A G+ +HG + + + + NALID
Sbjct: 294 AVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 353
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ A ++FE M+ +D+ SW ++++ + G + LF +M +G PD +
Sbjct: 354 MYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIA 413
Query: 339 FSTVLPACSHLAALMHGR 356
F T L ACSH L GR
Sbjct: 414 FVTTLAACSHAGLLEEGR 431
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 14/183 (7%)
Query: 33 ATCIAS-LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
A I S L C + L G++IH Y+ R +I + L +LI+MY+KC + A VF
Sbjct: 310 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFE 369
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLD---FFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
N+ +V ++ AMIS + F+ +G D F+ M+ G++PD F + C
Sbjct: 370 NMKSR-DVVSWTAMISAY---GFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAG 425
Query: 149 AVLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
+ E + L+ +K+ L+ + +V+ + ++EA K +E+P+ + +W
Sbjct: 426 LLEEGRSCFKLMTDHYKITPRLEHL--ACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWG 483
Query: 205 AMV 207
A++
Sbjct: 484 ALL 486
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/599 (35%), Positives = 342/599 (57%), Gaps = 11/599 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + LQ+CA L G+E+H+ +L+ G + + +L+ MY++C + AL VF +
Sbjct: 267 TTVGVLQVCAELAQLNHGRELHAALLKCGT-EFNIQCNALLVMYARCGWVDSALRVFREI 325
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + ++N+M+S + N + +DFF M Q G PD L+ + ++
Sbjct: 326 G-DKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLING 384
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H K LD D+ I + L++ Y+KC +E + +VF+ + ++D V W ++ YAQ
Sbjct: 385 REVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQS 444
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +A+ FR KEGI + + +L A + + VH ++ G + +
Sbjct: 445 SRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLI-LK 503
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N +ID+YG+ V AL IFEM+++KDI +W S++ + G + LF +ML+AG Q
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQ 563
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V +L A + L++L G++IHG+++ G+ + ++L+DMY+ CG
Sbjct: 564 PDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGA--------VVSSLVDMYSGCG 615
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
SM A VF + KDV W MI GM G GK+A+ +F M E + PD V+F+ +L
Sbjct: 616 SMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLY 675
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHS + +G+ +L +M S+Y + P EHY CV+D+LGR+GQ EAY+ +MP E
Sbjct: 676 ACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKS 735
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VVW LL A R+H N +LA IA ++ +LEP + GNYVL+SN++ GK+ V +IR M
Sbjct: 736 VVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKM 795
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
+Q +RK+P CSWIE+ + +HTF + D SH ++++I+ +L +T +LR G T F
Sbjct: 796 TEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSF 854
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 266/526 (50%), Gaps = 22/526 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L+ C + + + G E+H +++G+ S L +L+ MY+KC + AL VF +
Sbjct: 165 TLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWM 224
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N+ ISG N + LD F M+ G + YT +++ C ++ +
Sbjct: 225 RDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHG 284
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + K G + ++ + LV Y +C +++ AL+VF E+ +D + WN+M++ Y Q
Sbjct: 285 RELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN 343
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +A++ F M + G + +LSA+ +G NGR VH VK DS + +
Sbjct: 344 RLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIA 403
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N L+DMY K V + +F+ M KD SW +I+ + Q + + F G +
Sbjct: 404 NTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIK 463
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D + ++L ACS L ++ +Q+H Y + NGL D+ + N ++D+Y +CG
Sbjct: 464 VDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL---------DLILKNRIIDIYGECG 514
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A +F + KKD+ +W M+ + +G EA+ +F M A ++PD V VG+L
Sbjct: 515 EVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILG 574
Query: 454 ACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA- 511
A + L++G+E L+ ++ V + + ++DM G +N AL + +EA
Sbjct: 575 AIAGLSSLTKGKEIHGFLIRGKFPVEGAV--VSSLVDMYSGCGSMN----YALKVFDEAK 628
Query: 512 --NPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLM 553
+ V+W ++ A+ +HG+ A +R+ + + P H L+
Sbjct: 629 CKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALL 674
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 246/496 (49%), Gaps = 33/496 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGII---DSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
L L A + + +G+++H++ + TG + D+ T L+ MY KC ++ A +F+ +
Sbjct: 62 LDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPA 121
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ----LGVLPDKYTFPCLIKCCCDVMAVL 151
VF++NA+I S+ A + + + MR G PD T ++K C
Sbjct: 122 R-TVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGR 180
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGY 210
++HGL K GLD + +ALV Y KC ++ AL+VFE + RDV WN+ ++G
Sbjct: 181 CGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGC 240
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G F +AL++FRRM +G M+ +T GVL + +GR +H ++K G + +
Sbjct: 241 VQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI 300
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
NAL+ MY + V AL +F + +KD SWNS+++ + Q + + F M+
Sbjct: 301 QC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF PD ++L A HL L++GR++H Y V L D+ + N LMDMY
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDS--------DLQIANTLMDMYI 411
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KC S+ + VF +M KD SW +I Y + EA+ F + +K D +
Sbjct: 412 KCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGS 471
Query: 451 VLSACSHSGFLSQGREFLPLMES------RYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+L ACS G + + L++ R G++ I +ID+ G G++ A +
Sbjct: 472 ILEACS-------GLKSISLLKQVHSYAIRNGLLDLILKNR-IIDIYGECGEVCYALNI- 522
Query: 505 LAMPNEANPVVWRTLL 520
M ++ + V W +++
Sbjct: 523 FEMLDKKDIVTWTSMV 538
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 87/214 (40%), Gaps = 15/214 (7%)
Query: 318 DGTLRLFDRMLSAG-----FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
DG LR R L+A P + VL + A+ GRQ+H + V G +
Sbjct: 32 DGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATG-----A 86
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D D F+ L+ MY KCG + DA +F M + V SWN +I G EA+ +
Sbjct: 87 LGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGV 146
Query: 433 FSCMCE----AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
+ M A PD T VL AC G G E L + G+ + ++
Sbjct: 147 YRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGL-AVKSGLDRSTLVANALV 205
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
M + G L+ A + M + + W + ++
Sbjct: 206 GMYAKCGLLDSALRVFEWMRDGRDVASWNSAISG 239
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 331/583 (56%), Gaps = 9/583 (1%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA + + G ++H + L+T + T+ ++MY+KC M A +F+ L + N+ +
Sbjct: 268 CAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP-DHNLQS 326
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
YNAMI G+ N+ F+ F +++ D+ + + + E ++HGL
Sbjct: 327 YNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAI 386
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K L ++ + +A+++ Y KC + EA +F+E+ +RD V WNA++ Q K L
Sbjct: 387 KSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLS 446
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
F M + + FT VL A F NG VHG ++K G + V +AL+DMY
Sbjct: 447 HFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYS 506
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + EA +I +EE+ + SWN+I++ + + R F ML G +PD T++T
Sbjct: 507 KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYAT 566
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL C++LA + G+QIH ++ L + DV++ + L+DMY+KCG+M D+ ++
Sbjct: 567 VLDTCANLATVGLGKQIHAQMIKLEL--------LSDVYITSTLVDMYSKCGNMHDSLLM 618
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F K K+D +WN MI G+ G G+EAL++F M +KP+ TFV VL ACSH G
Sbjct: 619 FRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNA 678
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G + M S Y + P +EHY+C++D+LGR+GQ+ EA L MP EA+ ++WRTLL+
Sbjct: 679 KKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
++ GN ++AE AA + +L+P Y L+SNIY G +++V IR TMR N++K
Sbjct: 739 ICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKE 798
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSWIE+KD +HTF+ D++HP+ + IY+ L L +R G
Sbjct: 799 PGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 841
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 264/498 (53%), Gaps = 11/498 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T SL++C+ + G +IH ++ G ++ ++L++MY+KC ++ +L V
Sbjct: 155 FDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDV 214
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L + N +++A I+G ND +GL F M++ G+ + T+ + + C + A
Sbjct: 215 FSELP-DKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSA 273
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++H K DV +G+A ++ Y KC M +A K+F LP ++ +NAM+ G
Sbjct: 274 SRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIG 333
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ + +A ++F ++ K +++G LSA ++ G +HG+ +K S
Sbjct: 334 YARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSN 393
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NA++DMYGK + EA +F+ ME +D SWN+I+T EQ + TL F ML
Sbjct: 394 ICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLR 453
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+ +PD T+ +VL AC+ A +G ++HG I+ +G+ +F+ +AL+DMY
Sbjct: 454 SKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLK--------MFVGSALVDMY 505
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCG M +A+ + ++ ++ + SWN +I G+ + + +++ FS M E ++PD T+
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYA 565
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL C++ + G++ M + ++ + + ++DM + G ++++ + P
Sbjct: 566 TVLDTCANLATVGLGKQIHAQM-IKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPK 624
Query: 510 EANPVVWRTLLAASRLHG 527
+ V W ++ HG
Sbjct: 625 R-DSVTWNAMICGFAYHG 641
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 267/549 (48%), Gaps = 56/549 (10%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+TF+H F Q C+++ L+ G+E H++M+ +G + LI MY KCC +
Sbjct: 25 KTFSHIF---------QECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCAL 75
Query: 84 KYAL-------------------------------FVFNNLSCEPNVFTYNAMISGFYSN 112
+YA VFN++ +V ++N++ISG+ N
Sbjct: 76 EYAYKVFEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQN 135
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
K + F MR LGV+ D T +K C + + +IHG+ ++G D DV G
Sbjct: 136 GDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTG 195
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SALV+ Y KC +E++L VF ELP ++ + W+A + G Q + + L++F+ M ++GI
Sbjct: 196 SALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIG 255
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+S+ T V + + + G +H +K + S V V A +DMY K + +A ++
Sbjct: 256 VSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKL 315
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F ++ + ++ S+N+++ + + +LF ++ F D V+ S L A + +
Sbjct: 316 FSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGH 375
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G Q+HG + + L+ N + + NA++DMY KCG++ +A +F +M +D S
Sbjct: 376 SEGLQLHGLAIKSNLSSN--------ICVANAILDMYGKCGALVEASGLFDEMEIRDPVS 427
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLM 471
WN +I + + L F M +K++PDE T+ VL AC+ S G E ++
Sbjct: 428 WNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRII 487
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+S G+ + + ++DM + G + EA ++ + E V W +++ L ++
Sbjct: 488 KSGMGLKMFVG--SALVDMYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQKKSE- 543
Query: 532 AEIAAQRVF 540
+QR F
Sbjct: 544 ---DSQRFF 549
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 208/449 (46%), Gaps = 52/449 (11%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ TF + + C + A+ K+ H + G V++ + L+ Y+KC +E A KVFE
Sbjct: 24 RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83
Query: 194 ELPLRDVVLWNAMV--------------------------------NGYAQIGEFHKALE 221
E+P RD+V WN MV +GY Q G+ K++
Sbjct: 84 EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
VF +M G+ T+ L ++ G +HGI V+MG+D V +AL+DMY
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR---LFDRMLSAGFQPDLVT 338
K + ++L++F + +K+ SW++ + C +D LR LF M G T
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIA---GCVQNDQLLRGLKLFKEMQRKGIGVSQST 260
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+++V +C+ L+A G Q+H + + DV + A +DMY KC +M DA
Sbjct: 261 YASVFRSCAGLSASRLGTQLHCHALKTDFG--------SDVIVGTATLDMYAKCDNMSDA 312
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F+ + ++ S+N MI+GY + QG +A +F + + DEV+ G LSA +
Sbjct: 313 YKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVI 372
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
S+G + L + + + I ++DM G+ G L EA L M +PV W
Sbjct: 373 KGHSEGLQ-LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNA 430
Query: 519 LLAA---SRLHGNTDLAEIAAQRVFQLEP 544
++ A + G T L+ A ++EP
Sbjct: 431 IITACEQNESEGKT-LSHFGAMLRSKMEP 458
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 328/592 (55%), Gaps = 10/592 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ +++ A +L+KG+EIH L+ I L T L+ MY+KC + + A +F L
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ ++A+I+ + + L F M+ + P++ T ++ C D+ +
Sbjct: 391 QGR-DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH K +D D+ G+ALV+ Y KC F AL F + RD+V WN+++NGYAQI
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ + A+++F ++ I T+ GV+ A ++ G +HG++VK+G++S V
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569
Query: 274 NALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALIDMY K + A +F + KD +WN I+ + Q G+ + F +M F
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ VTF +VLPA ++LAA G H I+ G N + N+L+DMY KC
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN--------TLVGNSLIDMYAKC 681
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + ++ +F +M KD SWN M+ GY + G G A+ +FS M E++++ D V+FV VL
Sbjct: 682 GQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 741
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC H+G + +GR+ M +Y + P +EHY C++D+LGRAG +E MP E +
Sbjct: 742 SACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 801
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LL + R+H N L E+A + +LEP + ++V++S+IY G++ + R
Sbjct: 802 AGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSK 861
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M ++K PGCSW+ELK+ +H F D+SHP+ +S++ ++L ++ + G
Sbjct: 862 MNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 240/488 (49%), Gaps = 14/488 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+N++ + IH Y+ R S LI++YSKC + A VF+ + + +V ++ M
Sbjct: 244 SNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDV-SWGTM 300
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
++G+ N + L+ F+ M+ V +K + + + + + K+IHG + +
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRI 360
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + + L+ Y KC E+A ++F L RD+V W+A++ Q G +AL +F+
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + + +R T+ +L A + K G+ +H VK DS + AL+ MY K
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
AL F M +DI +WNS++ + Q G+ + +F ++ + PD T V+PA
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ L L G IHG IV G D + NAL+DMY KCGS+ A+ +F K
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFES--------DCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 406 S-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
KD +WN++I Y +G KEA+ F M P+ VTFV VL A ++ +G
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG 652
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
F + + G + +IDM + GQL+ + +L M + + V W +L+
Sbjct: 653 MAFHACI-IQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM-DHKDTVSWNAMLSGYA 710
Query: 525 LHGNTDLA 532
+HG+ D A
Sbjct: 711 VHGHGDRA 718
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 22/450 (4%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
+ S+S+ ++P L++C +L +IH+ ++ +G SIT LIN
Sbjct: 23 SLSSSTYTNYLHYPRLLSSC----------KHLNPLLQIHAQIIVSGF-KHHHSITHLIN 71
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+YS + A VF++ + P+ +N+MI + + + L+ + M + G+ PDKY
Sbjct: 72 LYSLFHKCDLARSVFDS-TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKY 130
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
TF ++K C + + E HG + + GL+ DV+IG+ LV+ Y K ++ A +VF+++
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P RDVV WNAM+ G +Q + +A++ FR M G+ S ++ + + + + R
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
+HG V + + S V N LID+Y K V A +F+ M ++D SW ++M + G
Sbjct: 251 SIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L LFD+M + + V+ + A + L G++IHG + +
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS------ 362
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
D+ + LM MY KCG A+ +F + +D+ +W+ +I G +EAL +F
Sbjct: 363 --DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
M K+KP+ VT + +L AC+ L G+
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGK 450
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 348/609 (57%), Gaps = 15/609 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L T + L+LCA + +L G+ +H+ + GI L+ T+L NMY+KC + A
Sbjct: 56 PPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARR 115
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDV 147
VF+ + V +NA+++G+ N A ++ M++ G PD T ++ C +
Sbjct: 116 VFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A+ ++ H + GL+ V + +A+++ Y KC + A VF+ +P ++ V WNAM+
Sbjct: 175 RALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMI 234
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+GYAQ G+ +AL +F RM +EG+ ++ +V L A +G G VH ++V++G D
Sbjct: 235 DGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLD 294
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V VMNALI MY K K V A +F+ ++ + SWN+++ Q G + +RLF RM
Sbjct: 295 SNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRM 354
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+PD T +V+PA + ++ + R IHGY + L + DV++ AL+D
Sbjct: 355 QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ--------DVYVLTALID 406
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A+++F ++ V +WN MI GYG G GK A+++F M + P+E T
Sbjct: 407 MYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETT 466
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ VLSACSH+G + +GRE+ M+ YG+ P +EHY ++D+LGRAG+L+EA+ M
Sbjct: 467 FLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + V+ +L A +LH N +LAE +AQ++F+L P +VL++NIY +++V
Sbjct: 527 PMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVA 586
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+R M + ++K PG S I+LK+ +HTF S +H +AK IY+ L L ++
Sbjct: 587 RVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK-----A 641
Query: 628 AGTLFDSDS 636
G + D+DS
Sbjct: 642 VGYVPDTDS 650
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 193/411 (46%), Gaps = 11/411 (2%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L F M G P TF L+K C + + +H + G+D + +AL N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRF 236
Y KC+ +A +VF+ +P+RD V WNA+V GYA+ G A+E+ RM +EG
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T+ VL A R H ++ G + V V A++D Y K + A +F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
K+ SWN+++ + Q G+ L LF+RM+ G V+ L AC L L G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++H +V GL N V + NAL+ MY+KC + A VF ++ ++ SWN M
Sbjct: 283 RVHELLVRIGLDSN--------VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
ILG +G ++A+ +F+ M +KPD T V V+ A + Q R ++ R
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-WIHGYSIRLH 393
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + T +IDM + G++N A + E + + W ++ HG
Sbjct: 394 LDQDVYVLTALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG 443
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
+A + A + AL F MS G T T +L G GR VH +
Sbjct: 28 HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G DS AL +MY K + +A +F+ M +D +WN+++ + + G + +
Sbjct: 88 RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147
Query: 324 FDRML-SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
RM G +PD +T +VLPAC++ AL R+ H + + +GL + V +
Sbjct: 148 VVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLE--------ELVNVA 199
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
A++D Y KCG +R A++VF M K+ SWN MI GY +G +EAL +F+ M E +
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+V+ + L AC G L +G L+ R G+ + +I M + +++ A
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLA 316
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 330/574 (57%), Gaps = 11/574 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
EIH+++++T ++ P +L+ + M YA+ +F + EP+ YN MI GF
Sbjct: 42 EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID-EPDSPAYNIMIRGFT 100
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + F M + V PD++TFPC++K C + A+ E ++IH L+ K G +
Sbjct: 101 LKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGF 160
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L++ Y C +E A +VF+E+ R+V WN+M GY + G + + +++F M +
Sbjct: 161 VKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELD 220
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I T+ VL+A + + G ++ V + G ++ +L+DMY K V A
Sbjct: 221 IRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTAR 280
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ M+ +D+ +W+++++ + Q L LF M A P+ +T ++L +C+ L
Sbjct: 281 RLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG 340
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+ +H +I + V + ALMD Y KCGS+ + VF KM K+V
Sbjct: 341 ALETGKWVHFFIKKKRMKLT--------VTLGTALMDFYAKCGSVESSIEVFGKMPVKNV 392
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW ++I G +GQGK+AL+ F M E ++P++VTF+GVLSACSH+G + +GR+
Sbjct: 393 LSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVS 452
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +G+ P IEHY C++D+LGRAG + EA++ MP + N V+WRTLLA+ ++H N +
Sbjct: 453 MSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVE 512
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
+ E + +++ LEP H G+Y+L+SNIY + G++E+ L +R M+++ ++K PGCS IEL
Sbjct: 513 IGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELD 572
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F + D H +++ IY + + +++ G
Sbjct: 573 GVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAG 606
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 183/351 (52%), Gaps = 6/351 (1%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
+P + F N FT CI L++C+ L +G++IH+ +++ G
Sbjct: 104 SPHEAILLFKEMHENSVQPDEFTFP-CI--LKVCSRLQALSEGEQIHALIMKCGFGSHGF 160
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+LI+MY+ C +++ A VF+ +S E NV T+N+M +G+ + + + F+ M +L
Sbjct: 161 VKNTLIHMYANCGEVEVARRVFDEMS-ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL 219
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ D+ T ++ C +A LE+ + I+ V + GL + + ++LV+ Y KC ++
Sbjct: 220 DIRFDEVTLVSVL-TACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+++ RDVV W+AM++GY+Q +AL++F M K I + T+ +LS+ +
Sbjct: 279 ARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAV 338
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+G + G+ VH + K V + AL+D Y K V ++E+F M K++ SW +
Sbjct: 339 LGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVL 398
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+ G L F ML +P+ VTF VL ACSH + GR +
Sbjct: 399 IQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 177/357 (49%), Gaps = 18/357 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T ++ L C +L+ G+ I+ Y+ G+ +P ITSL++MY+KC Q+ A +
Sbjct: 223 FDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRL 282
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++AMISG+ + LD F+ M++ + P++ T ++ C V+
Sbjct: 283 FDQMD-RRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCA-VLG 340
Query: 150 VLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
LE K +H + K + L V +G+AL++ Y KC +E +++VF ++P+++V+ W ++
Sbjct: 341 ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G A G+ KALE F M ++ + + T GVLSA G GR + V M D
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGR---DLFVSMSRDF 457
Query: 269 GV-PVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT---VHEQCGNHDGT 320
G+ P + ++D+ G+ + EA + + M + + W +++ VH+ + +
Sbjct: 458 GIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEES 517
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L+ +L D + S + + + ++ G + G+ K C I+
Sbjct: 518 LKQL-IILEPTHSGDYILLSNIYASVGRWEDAL---KVRGEMKEKGIKKTPGCSLIE 570
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 335/595 (56%), Gaps = 12/595 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ +++ C+ L+ G++IH Y R+ I LI++Y KC ++ A +
Sbjct: 222 FVLASAVSA---CSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N+ ++ MISG+ N F + + F +M Q G PD + ++ C + A
Sbjct: 279 FDCMEYR-NLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAA 337
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + ++IH V K L+ D Y+ +AL++ Y KC+ + EA VF+ L D + +NAM+ G
Sbjct: 338 IWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEG 397
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y++ + +A+ +F+RM + S T +L + + +HG+++K G
Sbjct: 398 YSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLD 457
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +ALID+Y K V +A +F M+ KD+ WNS++ H Q + ++LF+++L
Sbjct: 458 LYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLL 517
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G P+ TF ++ S LA++ HG+Q H +I+ G+ +D ++NAL+DMY
Sbjct: 518 SGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVD--------NDPHVSNALIDMY 569
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG +++ +M+F +DV WN MI Y G +EAL +F M EA+++P+ VTFV
Sbjct: 570 AKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFV 629
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSAC+H+GF+ +G M+S Y + P IEHY V+++ GR+G+L+ A E MP
Sbjct: 630 GVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPI 689
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ VWR+LL+A L GN ++ AA+ +P G YVL+SNIY + G + +V ++
Sbjct: 690 KPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNL 749
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M K GCSWIE+ +HTFI R HPEA+ IY+ L LT+ ++ G
Sbjct: 750 RQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLG 804
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 248/468 (52%), Gaps = 12/468 (2%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH+ G +D L+ YS +++ A +F+ + N+ ++ ++IS + +
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP-HRNLVSWGSVISMYTQHG 98
Query: 114 FAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ F ++ +P+++ +++ C AV +++HG+ KL LD +VY+G
Sbjct: 99 RDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVG 158
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+N Y K M+EA+ VF LP+R V WN ++ GYAQIG ALE+F RM EG+
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
RF + +SA +GF + GR +HG + ++ V+N LID+Y K + A ++
Sbjct: 219 PDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ ME +++ SW ++++ + Q + + +F M AG+QPD +++L +C LAA+
Sbjct: 279 FDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQIH +++ L D ++ NAL+DMY KC + +A+ VF +++ D S
Sbjct: 339 WQGRQIHAHVIKADLEA--------DEYVKNALIDMYAKCEHLTEARAVFDALAEDDAIS 390
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
+N MI GY + EA+++F M L+P +TFV +L S + ++ L+
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLI- 449
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + + +ID+ + +N+A + M + + V+W +++
Sbjct: 450 IKSGTSLDLYAASALIDVYSKCSLVNDA-KTVFNMLHYKDMVIWNSMI 496
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 256/504 (50%), Gaps = 15/504 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + G+++H ++ + + T+LIN+Y+K M A+ VF+ L
Sbjct: 127 LRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTP 186
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V T+N +I+G+ L+ F+ M GV PD++ + C + + ++IHG
Sbjct: 187 V-TWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHG 245
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
++ + D + + L++ Y KC + A K+F+ + R++V W M++GY Q +
Sbjct: 246 YAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAE 305
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F M++ G F T +L++ + GR +H V+K ++ V NALID
Sbjct: 306 AITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALID 365
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + + EA +F+ + E D S+N+++ + + + + +F RM +P L+T
Sbjct: 366 MYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLT 425
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L S A+ +QIHG I+ +G + D++ +AL+D+Y+KC + DA
Sbjct: 426 FVSLLGVSSSQLAIELSKQIHGLIIKSGTSL--------DLYAASALIDVYSKCSLVNDA 477
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF + KD+ WN MI G+ + QG+EA+ +F+ + + + P+E TFV +++ S
Sbjct: 478 KTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL 537
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ G++F + + GV +IDM + G + E L + E + + W +
Sbjct: 538 ASMFHGQQFHAWI-IKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE-DVICWNS 595
Query: 519 LLAASRLHGNTDLAEIAAQRVFQL 542
++ HG+ + A +VF+L
Sbjct: 596 MITTYAQHGHAE----EALQVFRL 615
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 327/592 (55%), Gaps = 10/592 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ +++ A +L+KG+EIH L+ I L T L+ MY+KC + + A +F L
Sbjct: 331 SAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGL 390
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ ++A+I+ + + L F M+ + P++ T ++ C D+ +
Sbjct: 391 QGR-DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLG 449
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH K +D D+ G+ALV+ Y KC F AL F + RD+V WN+++NGYAQI
Sbjct: 450 KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQI 509
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ + A+++F ++ I T+ GV+ A ++ G +HG++VK+G++S V
Sbjct: 510 GDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVK 569
Query: 274 NALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALIDMY K + A +F + KD +WN I+ + Q G+ + F +M F
Sbjct: 570 NALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ VTF +VLPA ++LAA G H I+ G N + N+L+DMY KC
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSN--------TLVGNSLIDMYAKC 681
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + ++ +F +M KD SWN M+ GY + G G A+ +FS M E++++ D V+FV VL
Sbjct: 682 GQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVL 741
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC H G + +GR+ M +Y + P +EHY C++D+LGRAG +E MP E +
Sbjct: 742 SACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPD 801
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LL + R+H N L E+A + +LEP + ++V++S+IY G++ + R
Sbjct: 802 AGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSK 861
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M ++K PGCSW+ELK+ +H F D+SHP+ +S++ ++L ++ + G
Sbjct: 862 MNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 239/488 (48%), Gaps = 14/488 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+N++ + IH Y+ R S LI++YSKC + A VF+ + + +V ++ M
Sbjct: 244 SNIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDV-SWGTM 300
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
++G+ N + L+ F+ M+ V +K + + + + + K+IHG + +
Sbjct: 301 MAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRI 360
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + + L+ Y KC E+A ++F L RD+V W+A++ Q G +AL +F+
Sbjct: 361 DSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + + +R T+ +L A + K G+ +H VK DS + AL+ MY K
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGF 480
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
AL F M +DI +WNS++ + Q G+ + +F ++ + PD T V+PA
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ L L G IHG IV G D + NAL+DMY KCGS+ A+ +F K
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFES--------DCHVKNALIDMYAKCGSLPSAEFLFNKT 592
Query: 406 S-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
KD +WN++I Y +G KEA+ F M P+ VTFV VL A ++ +G
Sbjct: 593 DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREG 652
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
F + + G + +IDM + GQL + +L M + + V W +L+
Sbjct: 653 MAFHACI-IQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEM-DHKDTVSWNAMLSGYA 710
Query: 525 LHGNTDLA 532
+HG+ D A
Sbjct: 711 VHGHGDRA 718
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 226/450 (50%), Gaps = 22/450 (4%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
+ S+S+ ++P L++C +L +IH+ ++ +G SIT LIN
Sbjct: 23 SLSSSTYTNYLHYPRLLSSC----------KHLNPLLQIHAQIIVSGF-KHHHSITHLIN 71
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+YS + A VF++ + P+ +N+MI + + + L+ + M + G+ PDKY
Sbjct: 72 LYSLFHKCDLARSVFDS-TPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKY 130
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
TF ++K C + + E HG + + GL+ DV+IG+ LV+ Y K ++ A +VF+++
Sbjct: 131 TFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P RDVV WNAM+ G +Q + +A++ FR M G+ S ++ + + + + R
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
+HG V + + S V N LID+Y K V A +F+ M ++D SW ++M + G
Sbjct: 251 SIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L LFD+M + + V+ + A + L G++IHG + +
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDS------ 362
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
D+ + LM MY KCG A+ +F + +D+ +W+ +I G +EAL +F
Sbjct: 363 --DILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQE 420
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
M K+KP+ VT + +L AC+ L G+
Sbjct: 421 MQNQKMKPNRVTLMSILPACADLSLLKLGK 450
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/610 (35%), Positives = 340/610 (55%), Gaps = 54/610 (8%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ VF ++ EPN ++N MI G + L+ + +M LG+ P+ YTFP L K
Sbjct: 28 LPYAISVFKSIQ-EPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK 86
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C A E K+IH + K GL +D+++ ++L++ Y + +E+A KVF+
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+P++DVV WNAM++GYA+IG + +ALE+F M K +
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ VLS G + GR +H + G+ S + ++NALID+Y K + A
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+FE ++ KD+ SWN+++ + +H L +F ML G P+ VT ++LPAC+HL A
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326
Query: 352 LMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ GR IH YI + G+ N S + +L+DMY KCG++ A VF + K
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTS--------LQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
++S N MI G+ M G+ A D+ S M + ++PD++TFVG+LSACSH+G GR+
Sbjct: 379 LSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFK 438
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M Y + P +EHY C+ID+LGR+G EA EL +M E + V+W +LL A ++H N
Sbjct: 439 SMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNL 498
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+L E+ AQ++ ++EP + G+YVL+SNIY ++++V +R + + ++K PGCS IE+
Sbjct: 499 ELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEI 558
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKHRLYLE 649
+H F+ D+ HP+ K IY L + + L E G F SD++ E +E
Sbjct: 559 DSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETG-------FVSDTSEVLQE-----ME 606
Query: 650 EVIAKGSLDF 659
E + +G+L +
Sbjct: 607 EELKEGALSY 616
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 179/387 (46%), Gaps = 43/387 (11%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
IS +N + + S + TF PF +C A Q+G++IH+ +L+ G+
Sbjct: 60 ISALNLYVYMISLGLSPNSYTF--PFLFKSC-------AKSKAAQEGKQIHAQILKYGLT 110
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFK---- 117
TSLI+MY++ ++ A VF+ S +V +Y AMI+G+ S D A K
Sbjct: 111 VDLHVHTSLISMYAQNGIVEDAHKVFDT-SSHRDVVSYTAMITGYASRGNMDKAQKMFDE 169
Query: 118 ------------------------GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
L+ FN M ++ V PD+ T ++ C V
Sbjct: 170 IPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELG 229
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH + G ++ + +AL++ Y KC ME A +FE L +DV+ WN ++ GYA I
Sbjct: 230 RQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYI 289
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVP 271
+AL VF+ M K G + T+ +L A +G GR +H + K G +
Sbjct: 290 NHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTS 349
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +LIDMY K + A ++F+ + K + S N+++ G D L RM G
Sbjct: 350 LQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDG 409
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQI 358
+PD +TF +L ACSH GR+I
Sbjct: 410 IEPDDITFVGLLSACSHAGLSDLGRKI 436
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 141/282 (50%), Gaps = 8/282 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+AT +++ C H N++ G++IHS++ G + + +LI++YSKC +M+ A +F
Sbjct: 212 TMATVLST---CTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLF 268
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L + +V ++N +I G+ + + L F M +LG P+ T ++ C + A+
Sbjct: 269 EGLQYK-DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 151 LEVKKIHGLVFK--LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ IH + K G+ + + ++L++ Y KC +E A +VF+ + + + NAM+
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYD 267
G+A G A ++ RM K+GI T G+LSA G GR + + + +
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ +ID+ G+ EA E+ M E D W S++
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/587 (34%), Positives = 341/587 (58%), Gaps = 10/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+Q A L++G+++H+ ++ G L+NMYSKC ++ +AL +F+ + + N
Sbjct: 12 IQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP-QRN 70
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMISG N + + F MR G +P ++ F I+ C + ++ K++H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G+ ++++GS L + Y KC M +A KVFEE+P +D V W AM++GY++IGEF +
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL F++M E + + + + L A + K GR VH VVK+G++S + V NAL D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 279 MYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + A +F + E +++ S+ ++ + + + L +F + G +P+
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TFS+++ AC++ AAL G Q+H ++ +D F+++ L+DMY KCG +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFD--------EDPFVSSILVDMYGKCGLLEQ 362
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F ++ +WN ++ +G G GK+A+ +F M + +KP+ +TF+ +L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G ++ M+ YGVVP EHY+CVID+LGRAG+L EA E MP E N W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+ L A R+HG+ ++ ++AA+++ +LEP + G VL+SNIY ++E+V +R MR N
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PG SW+++ H F + D SHP +IY +L +L +++ G
Sbjct: 543 VKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 589
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 21/411 (5%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
M+S +S+ + FS T G + T ++++ CA +++ G+++H L+
Sbjct: 77 MISGLSQNSKFSEAIR--TFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
GI ++L +MYSKC M A VF + C+ V ++ AMI G+ + L
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV-SWTAMIDGYSKIGEFEEALL 193
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F M V D++ + C + A + +H V KLG + D+++G+AL + Y
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 181 KCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
K ME A VF + R+VV + +++GY + + K L VF + ++GI + FT +
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
++ A + G +H V+K+ +D V + L+DMYGK + +A++ F+ + +
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 373
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI- 358
+WNS+++V Q G +++F+RM+ G +P+ +TF ++L CSH + G
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 359 ----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
Y VV G ++ SC ++D+ + G +++A+ +M
Sbjct: 434 YSMDKTYGVVPG-EEHYSC-----------VIDLLGRAGRLKEAKEFINRM 472
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 2/274 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L C + G+ +HS +++ G +L +MYSK M+ A VF S
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 271
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV +Y +I G+ + KGL F +R+ G+ P+++TF LIK C + A+ + ++
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 331
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K+ D D ++ S LV+ Y KC +E+A++ F+E+ + WN++V+ + Q G
Sbjct: 332 HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 391
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNA 275
A+++F RM G+ + T +L+ G + G + + G G +
Sbjct: 392 KDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 451
Query: 276 LIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ID+ G+ + EA E M E + F W S +
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 348/609 (57%), Gaps = 15/609 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L T + L+LCA + +L G+ +H+ + GI L+ T+L NMY+KC + A
Sbjct: 56 PPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARR 115
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDV 147
VF+ + V +NA+++G+ N A ++ M++ G PD T ++ C +
Sbjct: 116 VFDRMPVRDRV-AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A+ ++ H + GL+ V + +A+++ Y KC + A VF+ +P ++ V WNAM+
Sbjct: 175 RALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMI 234
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+GYAQ G+ +AL +F RM +EG+ ++ +V L A +G G VH ++V++G D
Sbjct: 235 DGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLD 294
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V VMNALI MY K K V A +F+ ++ + SWN+++ Q G + +RLF RM
Sbjct: 295 SNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRM 354
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+PD T +V+PA + ++ + R IHGY + L + DV++ AL+D
Sbjct: 355 QLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ--------DVYVLTALID 406
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A+++F ++ V +WN MI GYG G GK A+++F M + P+E T
Sbjct: 407 MYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETT 466
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ VLSACSH+G + +GRE+ M+ YG+ P +EHY ++D+LGRAG+L+EA+ M
Sbjct: 467 FLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM 526
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + V+ +L A +LH N +LAE +AQ++F+L P +VL++NIY +++V
Sbjct: 527 PMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVA 586
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+R M + ++K PG S I+LK+ +HTF S +H +AK IY+ L L ++
Sbjct: 587 RVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIK-----A 641
Query: 628 AGTLFDSDS 636
G + D+DS
Sbjct: 642 VGYVPDTDS 650
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/411 (29%), Positives = 193/411 (46%), Gaps = 11/411 (2%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L F M G P TF L+K C + + +H + G+D + +AL N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRF 236
Y KC+ +A +VF+ +P+RD V WNA+V GYA+ G A+E+ RM +EG
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T+ VL A R H ++ G + V V A++D Y K + A +F+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
K+ SWN+++ + Q G+ L LF+RM+ G V+ L AC L L G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++H +V GL N V + NAL+ MY+KC + A VF ++ ++ SWN M
Sbjct: 283 RVHELLVRIGLDSN--------VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAM 334
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
ILG +G ++A+ +F+ M +KPD T V V+ A + Q R ++ R
Sbjct: 335 ILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQAR-WIHGYSIRLH 393
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + T +IDM + G++N A + E + + W ++ HG
Sbjct: 394 LDQDVYVLTALIDMYAKCGRVNIA-RILFNSARERHVITWNAMIHGYGSHG 443
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 10/287 (3%)
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ AL F MS G T T +L G GR VH + G DS
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQ 333
AL +MY K + +A +F+ M +D +WN+++ + + G + + RM G +
Sbjct: 99 ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T +VLPAC++ AL R+ H + + +GL + V + A++D Y KCG
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEEL--------VNVATAILDAYCKCG 210
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+R A++VF M K+ SWN MI GY +G +EAL +F+ M E + +V+ + L
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
AC G L +G L+ R G+ + +I M + +++ A
Sbjct: 271 ACGELGCLDEGMRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLA 316
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 342/581 (58%), Gaps = 12/581 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ + ++IH+ +L G+ S IT LI+ S + +A VF++L P +F +NA+
Sbjct: 32 THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP-RPQIFPWNAI 90
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I G+ N+ L +++M+ V PD +TFP L+K C + + + +H VF+LG
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVF 223
D DV++ + L+ Y KC+ + A VFE LPL R +V W A+V+ YAQ GE +ALE+F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M K + + VL+A + K GR +H VVKMG + ++ +L MY K
Sbjct: 211 SHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A +F+ M+ ++ WN++++ + + G + +F M++ +PD ++ ++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ + +L R ++ Y+ G DDVF+++AL+DM+ KCGS+ A++VF
Sbjct: 331 SACAQVGSLEQARSMYEYV--------GRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +DV W+ MI+GYG+ G+ +EA+ ++ M + P++VTF+G+L AC+HSG + +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G F LM + + + P +HY CVID+LGRAG L++AYE+ MP + VW LL+A
Sbjct: 443 GWWFFNLM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H + +L E AAQ++F ++P + G+YV +SN+Y A ++ V ++R M+++ + K+ G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSW+E++ L F D+SHP + I ++ + +RL+E G
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 164/318 (51%), Gaps = 1/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC-EP 97
L+ C+ ++LQ G+ +H+ + R G LI +Y+KC ++ A VF L E
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ A++S + N + L+ F+HMR++ V PD ++ + + + + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K+GL+++ + +L Y KC + A +F+++ +++LWNAM++GYA+ G
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+++F M + + ++T +SA +G + R ++ V + Y V + +ALI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DM+ K V A +F+ ++D+ W++++ + G + L+ M G P+ V
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 338 TFSTVLPACSHLAALMHG 355
TF +L AC+H + G
Sbjct: 426 TFLGLLMACNHSGMVREG 443
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ +++ CA +L++ + ++ Y+ R+ D ++LI+M++KC ++ A VF+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR- 383
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + +V ++AMI G+ + A + + + M + GV P+ TF L+ C V E
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNG--- 209
L+ ++ + +++ + +++A +V + +P++ V +W A+++
Sbjct: 444 WWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 210 --YAQIGEF 216
+ ++GE+
Sbjct: 504 HRHVELGEY 512
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 328/594 (55%), Gaps = 9/594 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
++ T ++ L C+ L G+E+H+ ++ G + T+L++MY K M A VF
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L +V T+N M+ G+ + K + F M+Q+G+ P+K +F ++ C A+
Sbjct: 217 DGLHIR-DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEAL 275
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K +H GL D+ + ++L+ Y C +E A +VF+ + +RDVV W M+ GY
Sbjct: 276 AWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGY 335
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+ G A +F M +EGI R T +++A + + R +H V G+ + +
Sbjct: 336 AENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDL 395
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+ MY K + +A ++F+ M +D+ SW++++ + + G F M +
Sbjct: 396 LVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRS 455
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD VT+ +L AC HL AL G +I+ + L + V + NAL+ M
Sbjct: 456 NIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL--------VSHVPLGNALIIMNA 507
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K GS+ A+ +F M ++DV +WN MI GY + G +EAL +F M + + +P+ VTFVG
Sbjct: 508 KHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVG 567
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACS +GF+ +GR F + G+VPT++ Y C++D+LGRAG+L+EA L +MP +
Sbjct: 568 VLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVK 627
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+W +LL A R+HGN D+AE AA+R ++P YV +S++Y A G +E V +R
Sbjct: 628 PTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVR 687
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M + +RK GC+WIE+ +HTF+ DRSHP IYAEL L ++ G
Sbjct: 688 KVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREG 741
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 246/499 (49%), Gaps = 11/499 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + Q C + G+++ ++++ G + + +LI +YS C + A +F+++
Sbjct: 59 TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
V T+NA+I+G+ + F M G+ P TF ++ C +
Sbjct: 119 E-NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWG 177
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H V G D IG+ALV+ Y+K M++A +VF+ L +RDV +N MV GYA+
Sbjct: 178 KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKS 237
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G++ KA E+F RM + G+ ++ + +L G+ VH + G + V
Sbjct: 238 GDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVA 297
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+LI MY + A +F+ M+ +D+ SW ++ + + GN + LF M G Q
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQ 357
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T+ ++ AC+ A L H R+IH + + G D+ ++ AL+ MY KCG
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIHSQVDIAGFGT--------DLLVSTALVHMYAKCG 409
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+++DA+ VF M ++DV SW+ MI Y +G G EA + F M + ++PD VT++ +L+
Sbjct: 410 AIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLN 469
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC H G L G E + +V + +I M + G + A + M +
Sbjct: 470 ACGHLGALDVGMEIYT-QAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRR-DV 527
Query: 514 VVWRTLLAASRLHGNTDLA 532
+ W ++ LHGN A
Sbjct: 528 ITWNAMIGGYSLHGNAREA 546
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 211/404 (52%), Gaps = 12/404 (2%)
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
D + + G D T+ L + C ++ K++ + + G L++Y + L+ Y
Sbjct: 43 DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY 102
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
C + EA ++F+ + + VV WNA++ GYAQ+G +A +FR+M EG+ S T
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
VL A G+ VH VV G+ S + AL+ MY KG + +A ++F+ + +
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D+ ++N ++ + + G+ + LF RM G +P+ ++F ++L C AL G+ +H
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
+ GL +DD+ + +L+ MYT CGS+ A+ VF M +DV SW +MI G
Sbjct: 283 AQCMNAGL--------VDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEG 334
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME-SRYGVV 478
Y +G ++A +F+ M E ++PD +T++ +++AC+ S L+ RE ++ + +G
Sbjct: 335 YAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ T ++ M + G + +A ++ AMP + V W ++ A
Sbjct: 395 LLVS--TALVHMYAKCGAIKDARQVFDAMPRR-DVVSWSAMIGA 435
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 334/604 (55%), Gaps = 13/604 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ + + C +++ G+ +H Y ++TG+++S ++L++MY+K ++
Sbjct: 116 PFILSL---AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + NV ++ A+I+G + + L +F+ M + V D YTF +K C D
Sbjct: 173 VFHEMPMR-NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ ++IH K G D+ ++ + L Y KC +E L +FE++ +RDVV W ++
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q+G+ A++ F RM + + + +T V+S + + G +H +++ +G +
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+++ MY K + + IF M +DI SW++I+ + Q G+ L M
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR 411
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +P ++VL AC ++A L HG+Q+H Y++ GL + +AL++M
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA--------MVLSALINM 463
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ +A +F D+ SW MI GY G +E +D+F + L+PD VTF
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVLSACSH+G + G + M +Y + P+ EHY C+ID+L RAG+L++A + AMP
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ VVW TLL A R+HG+ + A+R+ QLEP G ++ ++NIY + GK+ E D
Sbjct: 584 FHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAAD 643
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA 628
IR M+ + V K PG SWI++KD + F++ DRSHP+ + IY L L +R E DC
Sbjct: 644 IRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRT-ELADCVQ 702
Query: 629 GTLF 632
T F
Sbjct: 703 ETGF 706
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTV 238
+K + A ++F+++ +D + W +++GY + +AL +F+ M E G+ + F +
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ A + G ++HG VK G + V V +AL+DMY K + E +F M
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+++ SW +I+T + G + L F M + + D TF+ L AC+ AL +GR+I
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
H + G D+ F+ N L MY KCG + +F KMS +DV SW +I
Sbjct: 240 HAQAMKKGF-------DVSS-FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
GQ + A+ F M E+ + P+E TF V+S C++ + G + L+ G+
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI-LHLGLA 350
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
++ ++ M + GQL + + M + V W T++A
Sbjct: 351 ASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIA 392
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ +P N + K +G A +F+ M +KD SW ++++ + + L LF M
Sbjct: 47 TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106
Query: 328 -LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ +G + D S AC + + +G +HGY V GL ++ VF+ +AL+
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL--------VNSVFVGSALL 158
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMYTK G + + + VF +M ++V SW +I G G KEAL FS M ++++ D
Sbjct: 159 DMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSY 218
Query: 447 TFVGVLSACSHSGFLSQGREF 467
TF L AC+ SG L+ GRE
Sbjct: 219 TFAIALKACADSGALNYGREI 239
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM- 436
D+ +N + K G + +A+ +F KMS+KD SW +I GY EAL +F M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E+ L+ D AC + ++ G E L + G+V ++ + ++DM + G+
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166
Query: 497 LNEAYELALAMPNEANPVVWRTLL 520
+ E + MP N V W ++
Sbjct: 167 IFEGRRVFHEMPMR-NVVSWTAII 189
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/649 (33%), Positives = 348/649 (53%), Gaps = 66/649 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L LC + + + +H +++T + LI++Y KC + YA VF+ +S E N
Sbjct: 31 LDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS-ERN 89
Query: 99 VFT-------------------------------YNAMISGFYSNDFAFKGLDFFNHMRQ 127
VF+ +N+MI+GF +D + LD+F M +
Sbjct: 90 VFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHR 149
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ + Y+F + C + + +IHGL+ K LDV++GS L++ Y KC +
Sbjct: 150 DDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGC 209
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VF+ + ++VV WN ++ Y Q G +ALE F RM++ G T+ V+SA
Sbjct: 210 ARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACAT 269
Query: 248 MGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMM---------- 296
+ FK G +H VVK + + + + NAL+DMY K V EA +F+ M
Sbjct: 270 LAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329
Query: 297 ---------------------EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++KDI SWN+++ + Q G ++ L LF + P
Sbjct: 330 MVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPT 389
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +L A ++LA L GRQ H ++V +G + D+F+ N+L+DMY KCGS+
Sbjct: 390 HYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSG--EEPDIFVGNSLIDMYMKCGSV 447
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ VF M +KD SWN MI+GY +G G EAL++F M E+ KPD VT +G L AC
Sbjct: 448 EEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCAC 507
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + +GR + M +G++P +HYTC++D+LGRAG L EA +L +MP + + VV
Sbjct: 508 SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LL+A ++H N L + A+++F+++P G YVL++N+Y G++ + + +R MR+
Sbjct: 568 WSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRR 627
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWI+++ +H F+ D+ HP+ K IY+ L LT +R+ G
Sbjct: 628 RGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAG 676
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 139/490 (28%), Positives = 225/490 (45%), Gaps = 81/490 (16%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D F L+ C + + + + +HG + + +V+I + L++ Y KC +++ A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 193 EE-------------------------------LPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ +P +D WN+M+ G+AQ F +AL+
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
F RM ++ ++ ++ LSA + K G +HG++ K Y V + + LID Y
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K VG A +F+ MEEK++ SWN ++T +EQ G L F RM GF+PD VT ++
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
V+ AC+ LAA G QIH +V + +N D+ + NAL+DMY KCG + +A+ V
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRN-------DLILGNALVDMYAKCGRVNEARCV 315
Query: 402 FTKM-------------------------------SKKDVASWNIMILGYGMDGQGKEAL 430
F +M +KD+ SWN +I GY +G+ +EAL
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM-----ESRYGVVPTIEHYT 485
+F + + P TF +L+A ++ L GR+ + + G P I
Sbjct: 376 GLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGN 435
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LE 543
+IDM + G + E + M E + V W T++ +G + A +FQ LE
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMV-EKDHVSWNTMIIGYAQNGYG----MEALELFQKMLE 490
Query: 544 PGHCGNYVLM 553
G ++V M
Sbjct: 491 SGEKPDHVTM 500
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 336/607 (55%), Gaps = 18/607 (2%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
+T+ TF FT A+ + + G+ H+ ++ +SL+NMY
Sbjct: 103 NTAPNAHTFAGVFTAASTL---------VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY 153
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
K A VF+ + E N ++ MISG+ S A + L F MR+ +++ F
Sbjct: 154 CKAGLTPEARKVFDTMP-ERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
++ V K+IH + K GL V +G+ALV Y KC +++AL+ FE
Sbjct: 213 TSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSD 272
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
++ + W+AM+ GYAQ G+ KAL++F M GI S FT GV++A +G G+ V
Sbjct: 273 KNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV 332
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H ++K+G++S + VM AL+DMY K + +A + F+ ++E DI W S++ + Q G +
Sbjct: 333 HDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGEN 392
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L L+ RM G P+ +T ++VL ACS LAAL G+QIH V G
Sbjct: 393 EDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGL-------- 444
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+V + +AL MY KCG ++D +VF +M +DV SWN MI G +G GKEAL++F M
Sbjct: 445 EVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ 504
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
KPD VTFV +LSACSH G + +G + +M +G+ P +EHY C++D+L RAG+L
Sbjct: 505 LEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKL 564
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E + + +WR +L A R + N +L A +++ +L YVL+S+IY
Sbjct: 565 KEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIY 624
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
A G++E+V +R M+ + V K PGCSWIELK G+H F+ D+ HP+ I+ EL L+
Sbjct: 625 SALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLS 684
Query: 618 ARLREHG 624
++++ G
Sbjct: 685 KQMKDEG 691
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 269/520 (51%), Gaps = 20/520 (3%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
H +LQKG+ +H+ ++++ S + I SL+N+Y+KC +++ A FVF + +V ++
Sbjct: 18 HNRSLQKGKALHAQIIKSS--SSCVYIANSLVNLYAKCQRLREAKFVFERIQ-NKDVVSW 74
Query: 103 NAMISGFYSNDFAFKG--LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
N +I+G+ + + ++ F MR P+ +TF + ++ + H +
Sbjct: 75 NCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVA 134
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K+ DV++GS+L+N Y K EA KVF+ +P R+ V W M++GYA +AL
Sbjct: 135 IKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEAL 194
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+FR M +E + F T VLSAL + NG+ +H I VK G S V V NAL+ MY
Sbjct: 195 GLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMY 254
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + +AL+ FE +K+ +W++++T + Q G+ D L+LF M +G +P TF
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
V+ ACS L A G+Q+H Y++ G +++ AL+DMY KC S+ DA+
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQ--------IYVMTALVDMYAKCSSIVDARK 366
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
F + + D+ W MI GY +G+ ++AL ++ M + P+E+T VL ACS
Sbjct: 367 GFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAA 426
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
L QG++ + +YG + + + M + G L + + MP + + W ++
Sbjct: 427 LEQGKQ-IHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMI 484
Query: 521 AASRLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ +G + E+ + QLE G +YV NI A
Sbjct: 485 SGLSQNGCGKEALELFEE--MQLE-GTKPDYVTFVNILSA 521
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 344/623 (55%), Gaps = 31/623 (4%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N + + + L+ CA + L+ G ++H++ L++ + T+ ++MY+KC M
Sbjct: 273 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 332
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A +F+N S N +YNAMI+G+ + FK L F+ + G+ D+ + + +
Sbjct: 333 QDAQILFDN-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C V + E +I+GL K L LDV + +A ++ Y KCQ + EA +VF+E+ RD V W
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NA++ + Q G+ ++ L +F M + I FT +L A G G +H +VK
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK 510
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEA----------------LEIFEMMEEKDI----FS 303
G S V +LIDMY K + EA +E E M K + S
Sbjct: 511 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNSI++ + + LF RM+ G PD T++TVL C++LA+ G+QIH ++
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L DV++ + L+DMY+KCG + D++++F K ++D +WN MI GY
Sbjct: 631 KKELQS--------DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G+G+EA+ +F M +KP+ VTF+ +L AC+H G + +G E+ +M+ YG+ P + H
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH-GNTDLAEIAAQRVFQL 542
Y+ ++D+LG++G++ A EL MP EA+ V+WRTLL +H N ++AE A + +L
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 802
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P Y L+SN+Y G +E+V D+R MR ++K PGCSW+ELKD LH F+ D++
Sbjct: 803 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 862
Query: 603 HPEAKSIYAELHSLTARLREHGD 625
HP + IY EL + + ++ D
Sbjct: 863 HPRWEEIYEELGLIYSEMKPFDD 885
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 259/532 (48%), Gaps = 38/532 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C+ + G +IH ++R G ++ ++L++MY+K + +L VF + E N
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKN 245
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++A+I+G N+ L FF M+++ + + +++ C + + ++H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D + +A ++ Y KC M++A +F+ + +NAM+ GY+Q K
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F R+ G+ +++GV A ++ G ++G+ +K V V NA ID
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK + + EA +F+ M +D SWN+I+ HEQ G TL LF ML + +PD T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC+ +L +G +IH IV +G+A N S + +L+DMY+KCG + +A
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS--------VGCSLIDMYSKCGMIEEA 536
Query: 399 QMVFT----------------KMSKKDV----ASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + + KM K + SWN +I GY M Q ++A +F+ M E
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC--VIDMLGRAGQ 496
+ PD+ T+ VL C++ G++ + + + Y C ++DM + G
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGD 653
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGH 546
L+++ L + V W ++ HG + A +R+ ++P H
Sbjct: 654 LHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 256/524 (48%), Gaps = 45/524 (8%)
Query: 42 CAHQTNLQKGQEIHSYMLRTG--------------------------IIDS-PL----SI 70
CA Q L+ G++ H++M+ +G + D PL S
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+IN YSK M A FN + +V ++N+M+SG+ N + K ++ F M + G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVR-DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D TF ++K C + +IHG+V ++G D DV SAL++ Y K + E+L+
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ +P ++ V W+A++ G Q AL+ F+ M K +S+ VL + +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +H +K + + V A +DMY K + +A +F+ E + S+N+++T
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q + L LF R++S+G D ++ S V AC+ + L G QI+G + + L+
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL- 415
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + NA +DMY KC ++ +A VF +M ++D SWN +I + +G+G E L
Sbjct: 416 -------DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++++PDE TF +L AC+ G L G E + + G+ +IDM
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDM 526
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+ G + EA ++ AN V T+ ++H N L E+
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMH-NKRLQEM 567
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 201/444 (45%), Gaps = 53/444 (11%)
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
DF N + + F + K C A+ K+ H + G ++ + L+ Y
Sbjct: 38 DFLNQVNSVSTT----NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVY 93
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYA---------------------------- 211
+ A VF+++PLRDVV WN M+NGY+
Sbjct: 94 TNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLS 153
Query: 212 ---QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q GE K++EVF M +EGI T +L + G +HGIVV++G D+
Sbjct: 154 GYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT 213
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V +AL+DMY KGK E+L +F+ + EK+ SW++I+ Q L+ F M
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+++VL +C+ L+ L G Q+H + + + A +G + A +DM
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG--------IVRTATLDM 325
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC +M+DAQ++F + S+N MI GY + G +AL +F + + L DE++
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELA 504
GV AC+ LS+G + L + ++ CV IDM G+ L EA+ +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 505 LAMPNEANPVVWRTLLAASRLHGN 528
M + V W ++AA +G
Sbjct: 441 DEMRRR-DAVSWNAIIAAHEQNGK 463
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 342/581 (58%), Gaps = 12/581 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ + ++IH+ +L G+ S IT LI+ S + +A VF++L P +F +NA+
Sbjct: 32 THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP-RPQIFPWNAI 90
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I G+ N+ L +++M+ V PD +TFP L+K C + + + +H VF+LG
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVF 223
D DV++ + L+ Y KC+ + A VFE LPL R +V W A+V+ YAQ GE +ALE+F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+M K + + VL+A + K GR +H VVKMG + ++ +L MY K
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A +F+ M+ ++ WN++++ + + G + +F M++ +PD ++ ++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ + +L R ++ Y+ G DDVF+++AL+DM+ KCGS+ A++VF
Sbjct: 331 SACAQVGSLEQARSMYEYV--------GRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +DV W+ MI+GYG+ G+ +EA+ ++ M + P++VTF+G+L AC+HSG + +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G F M + + + P +HY CVID+LGRAG L++AYE+ MP + VW LL+A
Sbjct: 443 GWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H + +L E AAQ++F ++P + G+YV +SN+Y A ++ V ++R M+++ + K+ G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSW+E++ L F D+SHP + I ++ + +RL+E G
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 163/318 (51%), Gaps = 1/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC-EP 97
L+ C+ ++LQ G+ +H+ + R G LI +Y+KC ++ A VF L E
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ A++S + N + L+ F+ MR++ V PD ++ + + + + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K+GL+++ + +L Y KC + A +F+++ +++LWNAM++GYA+ G
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+++F M + + ++T +SA +G + R ++ V + Y V + +ALI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DM+ K V A +F+ ++D+ W++++ + G + L+ M G P+ V
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 338 TFSTVLPACSHLAALMHG 355
TF +L AC+H + G
Sbjct: 426 TFLGLLMACNHSGMVREG 443
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ +++ CA +L++ + ++ Y+ R+ D ++LI+M++KC ++ A VF+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR- 383
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + +V ++AMI G+ + A + + + M + GV P+ TF L+ C V E
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNG--- 209
+ ++ + +++ + +++A +V + +P++ V +W A+++
Sbjct: 444 WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 210 --YAQIGEF 216
+ ++GE+
Sbjct: 504 HRHVELGEY 512
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/604 (33%), Positives = 334/604 (55%), Gaps = 13/604 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ + + C +++ G+ +H Y ++TG+++S ++L++MY+K ++
Sbjct: 116 PFILSL---AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRR 172
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + NV ++ A+I+G + + L +F+ M + V D YTF +K C D
Sbjct: 173 VFHEMPMR-NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ ++IH K G D+ ++ + L Y KC +E L +FE++ +RDVV W ++
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q+G+ A++ F RM + + + +T V+S + + G +H +++ +G +
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+++ MY K + + IF M +DI SW++I+ + Q G+ L M
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR 411
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +P ++VL AC ++A L HG+Q+H Y++ GL + +AL++M
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA--------MVLSALINM 463
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ +A +F D+ SW MI GY G +E +D+F + L+PD VTF
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVLSACSH+G + G + M +Y + P+ EHY C+ID+L RAG+L++A + AMP
Sbjct: 524 IGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMP 583
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ VVW TLL A R+HG+ + A+R+ QLEP G ++ ++NIY + GK+ E D
Sbjct: 584 FHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAAD 643
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA 628
IR M+ + V K PG SWI++KD + F++ DRSHP+ + IY L L +R E DC
Sbjct: 644 IRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRT-ELADCVQ 702
Query: 629 GTLF 632
T F
Sbjct: 703 ETGF 706
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 11/343 (3%)
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTV 238
+K + A ++F+++ +D + W +++GY + +AL +F+ M E G+ + F +
Sbjct: 60 VKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFIL 119
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ A + G ++HG VK G + V V +AL+DMY K + E +F M
Sbjct: 120 SLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPM 179
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+++ SW +I+T + G + L F M + + D TF+ L AC+ AL +GR+I
Sbjct: 180 RNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREI 239
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
H + G D+ F+ N L MY KCG + +F KMS +DV SW +I
Sbjct: 240 HAQAMKKGF-------DVSS-FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
GQ + A+ F M E+ + P+E TF V+S C++ + G + L+ G+
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALI-LHLGLA 350
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
++ ++ M + GQL + + M + V W T++A
Sbjct: 351 ASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR-DIVSWSTIIA 392
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 9/201 (4%)
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ +P N + K +G A +F+ M +KD SW ++++ + + L LF M
Sbjct: 47 TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106
Query: 328 -LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ +G + D S AC + + +G +HGY V GL ++ VF+ +AL+
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL--------VNSVFVGSALL 158
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMYTK G + + + VF +M ++V SW +I G G KEAL FS M ++++ D
Sbjct: 159 DMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSY 218
Query: 447 TFVGVLSACSHSGFLSQGREF 467
TF L AC+ SG L+ GRE
Sbjct: 219 TFAIALKACADSGALNYGREI 239
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM- 436
D+ +N + K G + +A+ +F KMS+KD SW +I GY EAL +F M
Sbjct: 48 DLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMR 107
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E+ L+ D AC + ++ G E L + G+V ++ + ++DM + G+
Sbjct: 108 VESGLRIDPFILSLAHKACGLNSDVNYG-ELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166
Query: 497 LNEAYELALAMPNEANPVVWRTLL 520
+ E + MP N V W ++
Sbjct: 167 IFEGRRVFHEMPMR-NVVSWTAII 189
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 344/623 (55%), Gaps = 31/623 (4%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N + + + L+ CA + L+ G ++H++ L++ + T+ ++MY+KC M
Sbjct: 231 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 290
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A +F+N S N +YNAMI+G+ + FK L F+ + G+ D+ + + +
Sbjct: 291 QDAQILFDN-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C V + E +I+GL K L LDV + +A ++ Y KCQ + EA +VF+E+ RD V W
Sbjct: 350 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 409
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NA++ + Q G+ ++ L +F M + I FT +L A G G +H +VK
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK 468
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEA----------------LEIFEMMEEKDI----FS 303
G S V +LIDMY K + EA +E E M K + S
Sbjct: 469 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 528
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNSI++ + + LF RM+ G PD T++TVL C++LA+ G+QIH ++
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L DV++ + L+DMY+KCG + D++++F K ++D +WN MI GY
Sbjct: 589 KKELQS--------DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G+G+EA+ +F M +KP+ VTF+ +L AC+H G + +G E+ +M+ YG+ P + H
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 700
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH-GNTDLAEIAAQRVFQL 542
Y+ ++D+LG++G++ A EL MP EA+ V+WRTLL +H N ++AE A + +L
Sbjct: 701 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 760
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P Y L+SN+Y G +E+V D+R MR ++K PGCSW+ELKD LH F+ D++
Sbjct: 761 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 820
Query: 603 HPEAKSIYAELHSLTARLREHGD 625
HP + IY EL + + ++ D
Sbjct: 821 HPRWEEIYEELGLIYSEMKPFDD 843
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 259/532 (48%), Gaps = 38/532 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C+ + G +IH ++R G ++ ++L++MY+K + +L VF + E N
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKN 203
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++A+I+G N+ L FF M+++ + + +++ C + + ++H
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D + +A ++ Y KC M++A +F+ + +NAM+ GY+Q K
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 323
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F R+ G+ +++GV A ++ G ++G+ +K V V NA ID
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 383
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK + + EA +F+ M +D SWN+I+ HEQ G TL LF ML + +PD T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC+ +L +G +IH IV +G+A N S + +L+DMY+KCG + +A
Sbjct: 444 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS--------VGCSLIDMYSKCGMIEEA 494
Query: 399 QMVFT----------------KMSKKDV----ASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + + KM K + SWN +I GY M Q ++A +F+ M E
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC--VIDMLGRAGQ 496
+ PD+ T+ VL C++ G++ + + + Y C ++DM + G
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGD 611
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGH 546
L+++ L + V W ++ HG + A +R+ ++P H
Sbjct: 612 LHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 662
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 256/524 (48%), Gaps = 45/524 (8%)
Query: 42 CAHQTNLQKGQEIHSYMLRTG--------------------------IIDS-PL----SI 70
CA Q L+ G++ H++M+ +G + D PL S
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+IN YSK M A FN + +V ++N+M+SG+ N + K ++ F M + G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVR-DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 134
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D TF ++K C + +IHG+V ++G D DV SAL++ Y K + E+L+
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ +P ++ V W+A++ G Q AL+ F+ M K +S+ VL + +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +H +K + + V A +DMY K + +A +F+ E + S+N+++T
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q + L LF R++S+G D ++ S V AC+ + L G QI+G + + L+
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL- 373
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + NA +DMY KC ++ +A VF +M ++D SWN +I + +G+G E L
Sbjct: 374 -------DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 426
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++++PDE TF +L AC+ G L G E + + G+ +IDM
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDM 484
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+ G + EA ++ AN V T+ ++H N L E+
Sbjct: 485 YSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMH-NKRLQEM 525
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/599 (36%), Positives = 341/599 (56%), Gaps = 13/599 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
F C LQ + +L + ++H+++ G + + T L Y+ C M YA
Sbjct: 20 FDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQH 79
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + N F +N+MI G+ N+ + L + M G PD +T+P ++K C D++
Sbjct: 80 IFDQIVLK-NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLL 138
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+K+H LV GL+ DVY+G+++++ Y K +E A VF+ + +RD+ WN M++
Sbjct: 139 LREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMS 198
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ + GE A EVF M ++G R T+ +LSA + K G+ +HG VV+ G
Sbjct: 199 GFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESG 258
Query: 269 GVP---VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
V +MN++IDMY + V A ++FE + KD+ SWNS+++ +E+CG+ L LF
Sbjct: 259 RVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFG 318
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM+ G PD VT +VL AC+ ++AL G + Y+V G N V + AL
Sbjct: 319 RMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVN--------VVVGTAL 370
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY CGS+ A VF +M +K++ + +M+ G+G+ G+G+EA+ +F M + PDE
Sbjct: 371 IGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDE 430
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
F VLSACSHSG + +G+E M Y V P HY+C++D+LGRAG L+EAY +
Sbjct: 431 GIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIE 490
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
M + N VW LL+A RLH N LA I+AQ++F+L P YV +SNIY A ++E+
Sbjct: 491 NMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWED 550
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V ++R + ++ +RK P S++EL +H F D SH ++ IYA+L L +L++ G
Sbjct: 551 VENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAG 609
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 345/622 (55%), Gaps = 23/622 (3%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
I+ + S F TF PF L C A LCA G+ IH++ G+
Sbjct: 84 IDLYRSMLYFRVPPNKYTF--PFVLKACSALADLCA-------GRTIHAHAAAVGLHTDL 134
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
T+LI++Y +C + A VF + +V +NAM++G+ ++ + M+
Sbjct: 135 FVSTALIDLYIRCARFGPAANVFAKMPMR-DVVAWNAMLAGYANHGMYHHAIAHLLDMQD 193
Query: 128 LGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD---VYIGSALVNTYLKCQ 183
G L P+ T L+ A+ + +H + LD + V IG+AL++ Y KC+
Sbjct: 194 RGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCK 253
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVL 242
+ A +VF + +R+ V W+A++ G+ +A +F+ M EG+ ++S +V L
Sbjct: 254 HLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASAL 313
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ + G +H ++ K G + + N+L+ MY K + EA +F+ + KD
Sbjct: 314 RVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTI 373
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+ ++++ + Q G + +F +M + QPD+ T +++PACSHLAAL HGR HG +
Sbjct: 374 SYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSV 433
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
++ GLA S + N+L+DMY KCG + ++ VF KM +D+ SWN MI GYG+
Sbjct: 434 IIRGLALETS--------ICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGI 485
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G GKEA +F M +PD+VTF+ +++ACSHSG +++G+ + M +YG++P +E
Sbjct: 486 HGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 545
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+L R G L+EAY+ +MP +A+ VW LL A R+H N DL + ++ + +L
Sbjct: 546 HYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKL 605
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
P GN+VL+SNI+ A G+++E ++R + + +K+PGCSWIE+ LH F+ D+S
Sbjct: 606 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQS 665
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HP + IY EL ++ +++ G
Sbjct: 666 HPCSPDIYHELDNILIDIKKLG 687
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 220/457 (48%), Gaps = 28/457 (6%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
Q+ A VF+ + P+ YNA+I + +D + M V P+KYTFP ++
Sbjct: 48 QLALARQVFDRIPA-PDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K C + + + IH +GL D+++ +AL++ Y++C A VF ++P+RDVV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
WNAM+ GYA G +H A+ M + G+ + T+ +L L G G VH
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 261 VVKMGYDSG---VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
++ D V + AL+DMY K K + A +F M ++ +W++++ C
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 318 DGTLRLFDRMLSAGFQ-PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
LF ML G + ++ L C+ LA L G Q+H + +G+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA------- 339
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+ N+L+ MY K G + +A M+F +++ KD S+ ++ GY +G+ +EA +F M
Sbjct: 340 -DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP----TIEHYTC--VIDM 490
++PD T V ++ ACSH L GR +G V +E C +IDM
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGR-------CSHGSVIIRGLALETSICNSLIDM 451
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G+++ + ++ MP + V W T++A +HG
Sbjct: 452 YAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG 487
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
++ + G + A+ VF ++ D ++N +I Y G A+D++ M ++ P++
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TF VL ACS L GR + + G+ + T +ID+ R + A +
Sbjct: 100 YTFPFVLKACSALADLCAGRT-IHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFA 158
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
MP + V W +LA HG
Sbjct: 159 KMPMR-DVVAWNAMLAGYANHG 179
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 353/599 (58%), Gaps = 18/599 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FT A A+L + A + +G ++H+ +++ G+ + SLIN+Y KC ++ A
Sbjct: 193 NSFTFA---AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +V T+N+MISG+ +N + L F MR V + +F +IK C ++
Sbjct: 250 ILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
+ +++H V K G D I +AL+ Y KC M +AL++F+E+ + +VV W AM
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ Q +A+++F M ++G+ + FT + +L+AL ++ + VH VVK Y
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNY 424
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V AL+D Y K V EA ++F +++KDI +W++++ + Q G + +++F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G +P+ TFS++L C+ A M G+Q HG+ + + L + + +++AL
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS--------LCVSSAL 536
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G++ A+ VF + +KD+ SWN MI GY GQ +ALD+F M + K+K D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+GV +AC+H+G + +G ++ +M + PT EH +C++D+ RAGQL +A ++
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MPN A +WRT+LAA R+H T+L +AA+++ ++P YVL+SN+Y G ++E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++NV+K PG SWIE+K+ ++F++ DRSHP IY +L L+ RL++ G
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 233/484 (48%), Gaps = 25/484 (5%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H ++ G +D TSL++ Y K K VF+ + E NV T+ +ISG+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK-ERNVVTWTTLISGYA 170
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + L F M+ G P+ +TF + + ++H +V K GLD +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++L+N YLKC + +A +F++ ++ VV WN+M++GYA G +AL +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +S + V+ + + +H VVK G+ + AL+ Y K + +AL
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 291 EIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+F E+ ++ SW ++++ Q + + LF M G +P+ T+S +L A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL--- 407
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ ++H +V ++ + + AL+D Y K G + +A VF+ + KD
Sbjct: 408 -PVISPSEVHAQVVKTNYERSST--------VGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS-GFLSQGREFL 468
+ +W+ M+ GY G+ + A+ MF + + +KP+E TF +L+ C+ + + QG++F
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF- 517
Query: 469 PLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ + ++ CV + M + G + A E+ E + V W ++++
Sbjct: 518 ----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV-FKRQREKDLVSWNSMISGYA 572
Query: 525 LHGN 528
HG
Sbjct: 573 QHGQ 576
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 217/433 (50%), Gaps = 15/433 (3%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
+Y +++ GF + + F ++ +LG+ D F ++K + L +++H
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K G DV +G++LV+TY+K ++ KVF+E+ R+VV W +++GYA+ + L
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F RM EG + FT L L G G VH +VVK G D +PV N+LI++Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K V +A +F+ E K + +WNS+++ + G L +F M + +F+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+V+ C++L L Q+H +V G + D + ALM Y+KC +M DA
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF--------LFDQNIRTALMVAYSKCTAMLDALR 351
Query: 401 VFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+F ++ +V SW MI G+ + +EA+D+FS M ++P+E T+ +L+A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP--- 408
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+S ++++ Y T+ T ++D + G++ EA ++ + ++ + V W +
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKV-FSGIDDKDIVAWSAM 465
Query: 520 LAASRLHGNTDLA 532
LA G T+ A
Sbjct: 466 LAGYAQTGETEAA 478
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ +D S+ S++ + G RLF + G + D FS+VL +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L + GRQ+H + G +DDV + +L+D Y K + +D + VF +M ++
Sbjct: 106 LCDELFGRQLHCQCIKFGF--------LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
+V +W +I GY + E L +F M +P+ TF L + G +G +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ + G+ TI +I++ + G + +A + + V W ++++ +G
Sbjct: 218 TVV-VKNGLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANG 274
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/614 (35%), Positives = 341/614 (55%), Gaps = 54/614 (8%)
Query: 17 FSTSSGNQTFNHPFTLAT---CIASLQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITS 72
FS ++ + FT T C L + L+K +HS +L + +P
Sbjct: 20 FSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKK---LHSKILIDQNLHPNPSLGIK 76
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L+ Y+ C + Y +F+ ++ + NV +N MI + +N L F M G P
Sbjct: 77 LMRAYAACGEPCYTRHIFDEIT-DKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP 135
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YT+PC++K C + +IHG V KLGLD+++YIG+ LV+ Y KC++++ A +V
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P RD+V WN+MV GYAQ G F+ AL++ R M
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMED------------------------ 231
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC--VGEALEIFEMMEEKDIFSWNSIMTV 310
+K+ D+G M +L+ C V ++F ++EK + SWN ++ V
Sbjct: 232 ---------LKLKPDAGT--MGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAV 280
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + + L+ +M G +PD V+ S+VLPAC L+A + GR+IH Y+ L N
Sbjct: 281 YVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPN 340
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+ + NAL+DMY KCG +++A+ VF +M +DV SW MI YGM GQGK+A+
Sbjct: 341 --------LLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAV 392
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++ PD + FV VL+ACSH+G + +GR LM + YG+ P IEHY C++D+
Sbjct: 393 ALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM-AEYGITPGIEHYNCMVDL 451
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGRAG+++EAY L MP E N VW +LL+A R++ + ++A +AA +FQL P G Y
Sbjct: 452 LGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYY 511
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+SNIY G++++V +R M + ++K PG S +E+ D ++TF++ D+SH ++K IY
Sbjct: 512 VLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIY 571
Query: 611 AELHSLTARLREHG 624
L L R++E G
Sbjct: 572 KALGVLVGRMKELG 585
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/581 (36%), Positives = 335/581 (57%), Gaps = 11/581 (1%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
++ + G++ H+ ++T + +SL+NMY K + A +F+ + E N ++ M
Sbjct: 130 SDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP-ERNAVSWATM 188
Query: 106 ISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
ISG+ S + A + + F MR + G +++ F ++ M V +++H L K
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
GL V + +ALV Y+KC +E+ALK FE ++ + W+AMV G+AQ G+ KAL++F
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLF 308
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M + G S FT+ GV++A GR +HG +K+GY+ + V++AL+DMY K
Sbjct: 309 YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC 368
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ +A + FE +++ D+ W SI+T + Q G+++G L L+ +M G P+ +T ++VL
Sbjct: 369 GSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVL 428
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
ACS+LAAL G+Q+H I+ + ++ + +AL MY KCGS+ D +F
Sbjct: 429 KACSNLAALDQGKQMHAGIIKYNFSL--------EIPIGSALSAMYAKCGSLDDGYRIFW 480
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M +DV SWN MI G +G+G E L++F MC KPD VTFV +LSACSH G + +
Sbjct: 481 RMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDR 540
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + +M + + PT+EHY C++D+L RAG+L+EA E + + +WR LLAAS
Sbjct: 541 GWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAAS 600
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H + DL A +++ +L YVL+S+IY A GK+E+V +R M+ + V K PG
Sbjct: 601 KNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPG 660
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSWIELK H F+ D HP+ I L LT +++ G
Sbjct: 661 CSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEG 701
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 245/493 (49%), Gaps = 18/493 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C L+KG+ +H+ +L TG S SLIN+Y+KC A VF++++ +V +
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSIN-NKDVVS 78
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQL-----GVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+N +I+ F L + RQL ++P+ +T + + ++
Sbjct: 79 WNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQA 138
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L K DV+ S+L+N Y K + EA +F+E+P R+ V W M++GYA
Sbjct: 139 HALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELA 198
Query: 217 HKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A E+F+ M E G + F T VLSAL GR VH + +K G V V N
Sbjct: 199 DEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVAN 258
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
AL+ MY K + +AL+ FE+ K+ +W++++T Q G+ D L+LF M +G P
Sbjct: 259 ALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP 318
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
T V+ ACS A++ GRQ+HGY + G +++ +AL+DMY KCGS
Sbjct: 319 SEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQ--------LYVLSALVDMYAKCGS 370
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ DA+ F + + DV W +I GY +G + AL+++ M + P+++T VL A
Sbjct: 371 IVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKA 430
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CS+ L QG++ + +Y I + + M + G L++ Y + MP + +
Sbjct: 431 CSNLAALDQGKQMHAGI-IKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR-DVI 488
Query: 515 VWRTLLAASRLHG 527
W +++ +G
Sbjct: 489 SWNAMISGLSQNG 501
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 17/386 (4%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +H + G I ++L+N Y KC +A VF+ + +DVV WN ++N ++Q
Sbjct: 30 RALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQ 89
Query: 214 GEFHKALEV---FRR--MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+L V FR+ M+ + I + T+TGV +A + + GR H + VK
Sbjct: 90 QAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSH 149
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--R 326
V ++L++MY K V EA ++F+ M E++ SW ++++ + D LF R
Sbjct: 150 DVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMR 209
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
G + F++VL A + + GRQ+H + NGL + V + NAL+
Sbjct: 210 HEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGL--------VCIVSVANALV 261
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY KCGS+ DA F K+ +W+ M+ G+ G +AL +F M ++ P E
Sbjct: 262 TMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEF 321
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VGV++ACS + + +GR+ + + G + + ++DM + G + +A +
Sbjct: 322 TLVGVINACSDACAIVEGRQ-MHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARK-GFE 379
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLA 532
+ + V+W +++ +G+ + A
Sbjct: 380 CIQQPDVVLWTSIITGYVQNGDYEGA 405
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 181/387 (46%), Gaps = 19/387 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + C+ + +G+++H Y L+ G +++L++MY+KC + A F +
Sbjct: 322 TLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECI 381
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+P+V + ++I+G+ N L+ + M+ GV+P+ T ++K C ++ A+ +
Sbjct: 382 Q-QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQG 440
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + K L++ IGSAL Y KC +++ ++F +P RDV+ WNAM++G +Q
Sbjct: 441 KQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQN 500
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS----- 268
G ++ LE+F +M EG T +LSA MG G V KM +D
Sbjct: 501 GRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWV----YFKMMFDEFNIAP 556
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V ++D+ + + EA E E + + W ++ + ++D +++
Sbjct: 557 TVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKL 616
Query: 328 LSAGF--QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G V S++ A L ++ G + G+ K C I+ + +
Sbjct: 617 MELGSLESSAYVLLSSIYTA---LGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVF 673
Query: 386 M---DMYTKCGSMRDAQMVFTKMSKKD 409
+ +M+ + +R + TK+ K +
Sbjct: 674 VVGDNMHPQIDEIRLGLKLLTKLMKDE 700
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 134/289 (46%), Gaps = 17/289 (5%)
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ GR +H ++ G S + N+LI++Y K +A +F+ + KD+ SWN ++
Sbjct: 26 LRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINA 85
Query: 311 HEQCGNHDGTL---RLFDRMLSA--GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
Q H +L LF +++ A P+ T + V A S L+ GRQ H
Sbjct: 86 FSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH------ 139
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
LA +C DVF ++L++MY K G + +A+ +F +M +++ SW MI GY
Sbjct: 140 ALAVKTACS--HDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQEL 197
Query: 426 GKEALDMFSCMC--EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
EA ++F M E +E F VLSA + ++ GR+ L + G+V +
Sbjct: 198 ADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSL-AMKNGLVCIVSV 256
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M + G L +A + + N + W ++ G++D A
Sbjct: 257 ANALVTMYVKCGSLEDALK-TFELSGNKNSITWSAMVTGFAQFGDSDKA 304
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/593 (36%), Positives = 348/593 (58%), Gaps = 22/593 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYALFVFNNL---- 93
LQ C T L+ IHS + G ++ +P + LI +YSK + A +F++
Sbjct: 32 LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88
Query: 94 ---SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ PN F N M+ + + +++ +D + +M+++GV + +T+P ++K C +
Sbjct: 89 HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + +HG V + G D+++ +ALV+ Y KC + +A +VF+ + +RDVV W AM+ Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL +FR+M +EG T V SA+ +G + VHG V G+ V
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDV 268
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+++ MY K V A +F+ MEE++ SWNS+++ + Q G L LF++M ++
Sbjct: 269 SVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 328
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ VT ++ ACS+L + GR++H +++ + + DID + NA+MDMY
Sbjct: 329 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM-------DIDTT-LRNAIMDMYM 380
Query: 391 KCGSMRDAQMVFT--KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
KCG + A +F ++ ++DV+SWN++I GYG+ G GKEAL++FS M ++P+++TF
Sbjct: 381 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 440
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+LSACSH+G + +GR+ M ++ V P ++HY C++DMLGRAG LNEA+ L +P
Sbjct: 441 TSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 499
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VW LL A R+HGNT+L EIAA +FQLEP H G YVLMSNIY A K++EV
Sbjct: 500 SRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEM 559
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+R M+ + ++K S IE +H F ++D+S P + +Y ++ SL ++
Sbjct: 560 VRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK 612
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + + C++ + G+++H++++ + + ID+ L ++++MY KC + A+ +FNN
Sbjct: 336 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR-NAIMDMYMKCGDLDTAVEMFNN 394
Query: 93 LSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
E +V ++N +ISG+ + + L+ F+ M+ GV P+ TF ++ C +
Sbjct: 395 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 454
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM---- 206
E +K + KL + ++ + +V+ + F+ EA ++ +++P R +W A+
Sbjct: 455 EGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 514
Query: 207 -VNGYAQIGEF 216
++G ++GE
Sbjct: 515 RIHGNTELGEI 525
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 315/568 (55%), Gaps = 50/568 (8%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ VF + EPN +N M G + L + M LG+LP+ +TFP L+K
Sbjct: 25 LPYAISVFETIP-EPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLK 83
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--------- 193
C E ++IHG V KLG DLD+Y+ ++L++ Y + +E+A KVF+
Sbjct: 84 SCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVS 143
Query: 194 ----------------------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
E+P++DVV WNAM++GYA+ G + KALE+F+ M K +
Sbjct: 144 YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNV 203
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ V+SA G + GR VH + G+ S + ++NALID+Y K V A E
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+ E + KD+ SWN+++ + + L LF ML +G P+ VT ++LPAC+HL A
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA------LMDMYTKCGSMRDAQMVFTKM 405
+ GR IH YI K + V + NA L+DMY KCG + A V
Sbjct: 324 IDIGRWIHVYI----------DKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSS 373
Query: 406 S-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ + +++WN MI G+ M G+ A D+FS M + ++PD++TFVG+LSACSHSG L G
Sbjct: 374 AFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
R M Y + P +EHY C+ID+LG +G EA E+ MP E + V+W +LL A +
Sbjct: 434 RNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACK 493
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN-PG 583
+HGN +L E A+++ ++EP + G+YVL+SNIY GK+ EV IR + + ++K PG
Sbjct: 494 IHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPG 553
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYA 611
CS IE+ +H FI D+ HP+ + IY
Sbjct: 554 CSSIEIDSVVHEFIIGDKLHPQNREIYG 581
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 214/515 (41%), Gaps = 89/515 (17%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L +C A ++GQ+IH ++L+ G TSLI+MY++ +++
Sbjct: 76 FTFPFLLKSC-------AKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLED 128
Query: 86 ALFVFNNLSCE------------------------------PNVFTYNAMISGFYSNDFA 115
A VF+ S +V ++NAMISG+
Sbjct: 129 AQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNY 188
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
K L+ F M + V PD+ T ++ C ++ +++H + G ++ I +AL
Sbjct: 189 KKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL 248
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ Y KC +E A ++ E L +DV+ WN ++ GY + + +AL +F+ M + G +
Sbjct: 249 IDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 308
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA------LIDMYGKGKCVGEA 289
T+ +L A +G GR +H + K GV V NA LIDMY K + A
Sbjct: 309 VTMLSILPACAHLGAIDIGRWIHVYIDKKL--KGVVVTNASSLRTSLIDMYAKCGDIDAA 366
Query: 290 LEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
++ + + + +WN+++ G + +F RM G +PD +TF +L ACSH
Sbjct: 367 PQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 426
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L GR I SMR + K+
Sbjct: 427 SGMLDLGRNIF---------------------------------RSMRQDYNITPKLEH- 452
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
+ MI G G KEA +M + M ++PD V + +L AC G L G F
Sbjct: 453 ----YGCMIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFA 505
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ P Y + ++ AG+ NE ++
Sbjct: 506 KKLIKIEPENPG--SYVLLSNIYATAGKWNEVXKI 538
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 350/630 (55%), Gaps = 19/630 (3%)
Query: 2 LSKISRINPFSSCFNFSTSSGN----QTFNH---PFTLATCIASLQLCAHQTNLQKGQEI 54
+S ++ I +S C FS + G Q H PF +T L+L + G +
Sbjct: 111 VSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTV---LKLLVSAEWAKLGFSV 167
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H+ + + G T+LI+ YS C + A VF+ + + ++ ++ M++ + N+
Sbjct: 168 HACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYK-DMVSWTGMVACYVENEC 226
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
+ L F+ MR +G P+ +TF ++K C + K +HG FK ++++G
Sbjct: 227 FEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE 286
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y+K +++AL+VFEE+P DV+ W+ M+ YAQ + +A+E+F RM + + +
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPN 346
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
+FT+ +L A + + G +H VVK+G D V V NAL+DMY K + +L++F
Sbjct: 347 QFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFS 406
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
SWN+++ + Q GN + L LF ML Q VT+S+VL AC+ +AAL
Sbjct: 407 ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G QIH V KN + NAL+DMY KCG+++DA++VF + + D SWN
Sbjct: 467 GSQIHSLSVKTIYDKN--------TVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWN 518
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI GY + G EAL F M E + KPD+VTFVG+LSACS++G L +G+ + M
Sbjct: 519 AMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEE 578
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
Y + P EHYTC++ +LGR+G L++A +L +P E + +VWR LL+A +H + +L I
Sbjct: 579 YDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRI 638
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
+AQRV ++EP +VL+SNIY ++ V IR +M+++ +RK PG SWIE + +H
Sbjct: 639 SAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVH 698
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F D SHP+ K I L L + R G
Sbjct: 699 YFSVGDTSHPDTKLINGMLEWLNMKARNEG 728
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 204/405 (50%), Gaps = 16/405 (3%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
+ Y + L++ C K +H + K G LD++ + L+N Y+K + +A K+F
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P R+ V + ++ GY+Q F +A+ +F R+ EG ++ F + VL L+ + K
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMY---GKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G VH V K+G+DS V ALID Y G +C A ++F+ +E KD+ SW ++
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAEC---ARQVFDAIEYKDMVSWTGMVA 219
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ + + +L+LF RM GF+P+ TF++VL AC L G+ +HG
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSY-- 277
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
++++F+ L+D+Y K G + DA VF +M K DV W+ MI Y Q +EA
Sbjct: 278 ------LEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEA 331
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
++MF M + P++ T +L AC+ L G + + + G+ + ++D
Sbjct: 332 IEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQ-IHCHVVKVGLDMNVFVSNALMD 390
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
M + G++ + +L PN V W T++ GN + A I
Sbjct: 391 MYAKCGRMENSLQLFSESPN-CTDVSWNTVIVGYVQAGNGEKALI 434
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 22/304 (7%)
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+R S + + +L + I G G+ +H ++K G + N L++ Y K
Sbjct: 33 QRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKY 92
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ +A ++F+ M +++ S+ +++ + QC + LF R+ G + + FSTVL
Sbjct: 93 DSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVL 152
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
G +H + G D F+ AL+D Y+ CG A+ VF
Sbjct: 153 KLLVSAEWAKLGFSVHACVYKLGFDS--------DAFVGTALIDCYSVCGYAECARQVFD 204
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ KD+ SW M+ Y + +E+L +FS M KP+ TF VL AC
Sbjct: 205 AIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACV------- 257
Query: 464 GREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G E + ++ +G + +ID+ ++G +++A ++ MP + + + W
Sbjct: 258 GLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKD-DVIPWS 316
Query: 518 TLLA 521
++A
Sbjct: 317 FMIA 320
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 344/649 (53%), Gaps = 79/649 (12%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+L + ++ H+++L+TG+ + T L++ Y+ A V + L EPNVF+++ +
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD-LVPEPNVFSFSTL 85
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I F L F+ M G++PD P +K C + A+ +++HG+ G
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D ++ S+LV+ Y+KC + +A +VF+ + DVV W+A+V YA+ G +A +F
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 226 MSKEGI------W---MSRFTVTGVLSALIMM-------GFFKNGR-------------- 255
M G+ W ++ F +G+ S ++M GF +G
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 256 -----VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI--------- 301
++HG V+K G S V +ALIDMYGK C E ++F+ M+ D+
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 302 --------------------------FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
SW S++ Q G L LF M AG +P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPN 385
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT +LPAC ++AALMHG+ H + + G++ DV++ +AL+DMY KCG +
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST--------DVYVGSALIDMYAKCGRI 437
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ +++ F + K++ WN +I GY M G+ KEA+++F M + KPD ++F VLSAC
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S SG +G + M S+YG+ +EHY C++ +L RAG+L +AY + MP + V
Sbjct: 498 SQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV 557
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL++ R+H N L E+AA+++F+LEP + GNY+L+SNIY + G + EV +R M+
Sbjct: 558 WGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKN 617
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +RKNPGCSWIE+K+ +H ++ D+SHP+ I +L L+ +++ G
Sbjct: 618 KGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLG 666
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/624 (33%), Positives = 340/624 (54%), Gaps = 48/624 (7%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+ +++H+ +RT + S S + +I++Y+ + AL +F L P V + ++I F
Sbjct: 23 QAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEALLLFKTLKSPP-VLAWKSVIRCF 80
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
K L F MR G PD FP ++K C +M + + +HG + +LG+D D+
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 170 YIGSALVNTYLKCQFM------------------------------------EEALKVFE 193
Y G+AL+N Y K M + +VFE
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P +DVV +N ++ GYAQ G + AL + R M + FT++ VL
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +HG V++ G DS V + ++L+DMY K + ++ +F + +D SWNS++ + Q
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ LRLF +M++A +P V FS+V+PAC+HLA L G+Q+HGY++ G N
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN--- 377
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+F+ +AL+DMY+KCG+++ A+ +F +M+ D SW +I+G+ + G G EA+ +F
Sbjct: 378 -----IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +KP++V FV VL+ACSH G + + + M YG+ +EHY V D+LGR
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AG+L EAY M E VW TLL++ +H N +LAE A+++F ++ + G YVLM
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
N+Y + G+++E+ +R MR++ +RK P CSWIE+K+ H F+S DRSHP I L
Sbjct: 553 CNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Query: 614 HSLTARLREHGDCC--AGTLFDSD 635
++ ++ + G +G L D D
Sbjct: 613 KAVMEQMEKEGYVADTSGVLHDVD 636
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 198/431 (45%), Gaps = 47/431 (10%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K LIK + + + K++H + L S +++ Y + + EAL +F+
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
L V+ W +++ + F KAL F M G VL + MM +
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL----------------------- 290
G VHG +V++G D + NAL++MY K +G +
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 291 -------------EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+FE+M KD+ S+N+I+ + Q G ++ LR+ M + +PD
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+VLP S ++ G++IHGY++ G+ DV++ ++L+DMY K + D
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGID--------SDVYIGSSLVDMYAKSARIED 295
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ VF+++ +D SWN ++ GY +G+ EAL +F M AK+KP V F V+ AC+H
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L G++ + R G I + ++DM + G + A ++ M N + V W
Sbjct: 356 LATLHLGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWT 413
Query: 518 TLLAASRLHGN 528
++ LHG+
Sbjct: 414 AIIMGHALHGH 424
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 19/356 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ L + + ++ KG+EIH Y++R G IDS + I +SL++MY+K +++ +
Sbjct: 243 FTLSSV---LPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L C + ++N++++G+ N + L F M V P F +I C +
Sbjct: 299 VFSRLYCRDGI-SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++HG V + G +++I SALV+ Y KC ++ A K+F+ + + D V W A++
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYD 267
G+A G H+A+ +F M ++G+ ++ VL+A +G + K+ G +
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 268 SGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ A+ D+ G+ + EA I +M E W+++++ C H L L ++
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS---SCSVHK-NLELAEK 533
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGR-----QIHGYIVVNGLAKNGSCKDID 377
+ F D + C+ A+ +GR ++ + GL K +C I+
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYAS--NGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 343/649 (52%), Gaps = 79/649 (12%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+L + ++ H+++L+TG+ + T L++ Y+ A V + L EPNVF+++ +
Sbjct: 27 ASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD-LVPEPNVFSFSTL 85
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I F L F+ M G++PD P +K C + A+ +++HG+ G
Sbjct: 86 IYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGF 145
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D ++ S+LV+ Y+KC + +A +VF+ + DVV W+A+V YA+ G +A +F
Sbjct: 146 DSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSE 205
Query: 226 MSKEGI------W---MSRFTVTGVLSALIMM-------GFFKNGR-------------- 255
M G+ W ++ F +G+ S ++M GF +G
Sbjct: 206 MGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLED 265
Query: 256 -----VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI--------- 301
++HG V+K G S V +ALIDMYGK C E ++F+ M+ D+
Sbjct: 266 LVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFG 325
Query: 302 --------------------------FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
SW S++ Q G L LF M AG +P+
Sbjct: 326 LSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPN 385
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT +LPAC ++AALMHG+ H + + G++ DV++ +AL+DMY KCG +
Sbjct: 386 SVTIPCLLPACGNIAALMHGKAAHCFSLRRGIST--------DVYVGSALIDMYAKCGRI 437
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ +++ F + K++ WN +I GY M G+ KEA+++F M + KPD ++F VLSAC
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S SG +G + M S+YG+ +EHY C++ +L RAG+L +AY + MP + V
Sbjct: 498 SQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV 557
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL++ R+H N L E+AA+++F+LEP + GNY+L+SNIY + G + EV +R M+
Sbjct: 558 WGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKN 617
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +RKNPGCSWIE+K+ +H ++ D+SHP+ I L L+ +++ G
Sbjct: 618 KGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLG 666
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/586 (36%), Positives = 328/586 (55%), Gaps = 12/586 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L +G+E+H +++R G + +LI MY KC +K A +F+ + +
Sbjct: 203 LRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP-RRD 261
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ N +GL F MR L V PD T +I C + + IH
Sbjct: 262 IISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V G +D+ + ++L YL EA K+F + +D+V W M++GY K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEK 381
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A++ +R M ++ + TV VLSA +G G +H + +K S V V N LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K KC+ +AL+IF + K++ SW SI+ + N +F R + QP+ +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIA-GLRLNNRCFEALIFFRQMKMTLQPNAIT 500
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L AC+ + ALM G++IH +++ G+ +DD F+ NAL+DMY +CG M A
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVG-------LDD-FLPNALLDMYVRCGRMNIA 552
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F KKDV+SWNI++ GY GQG +++F M +A+++PDE+TF+ +L C S
Sbjct: 553 WNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKS 611
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ QG + ME YGV P ++HY CV+D+LGRAG+L EA++ MP +P VW
Sbjct: 612 QMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H N DL E++AQR+F+L+ G G Y+L+ N+Y GK+ EV +R M++ +
Sbjct: 671 LLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ GCSW+E+K +H F+S D+ HP+ K I L ++ E G
Sbjct: 731 TVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVG 776
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 245/467 (52%), Gaps = 12/467 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A ++LC + ++G +++S L + S + + M+ + + A +VF +S
Sbjct: 98 VALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFLAMFVRFGNLVDAWYVFGKMS- 156
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVK 154
E N+F++N ++ G+ + + + ++ M +G V PD YTFPC+++ C + + +
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGR 216
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H V + G +LD+ + +AL+ Y+KC ++ A +F+ +P RD++ WNAM++GY + G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
H+ L++F M + T+T V+SA ++G + GR +H V+ G+ + V N
Sbjct: 277 MGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L MY EA ++F M+ KDI SW ++++ +E + + + M +P
Sbjct: 337 SLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKP 396
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D +T + VL AC+ L L G ++H + L I V + N L++MY+KC
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARL--------ISYVIVANNLINMYSKCKC 448
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A +F + +K+V SW +I G ++ + EAL F M + L+P+ +T L+A
Sbjct: 449 IDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM-KMTLQPNAITLTAALAA 507
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
C+ G L G+E + R GV ++DM R G++N A+
Sbjct: 508 CARIGALMCGKEIHAHV-LRTGVGLDDFLPNALLDMYVRCGRMNIAW 553
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 223/424 (52%), Gaps = 15/424 (3%)
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ G +N + + N M++L V D+ F L++ C A E K++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
L V +G+A + +++ + +A VF ++ R++ WN +V GYA+ G F +A+ ++ R
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 226 M-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M G+ +T VL + GR VH VV+ GY+ + V+NALI MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A +F+ M +DI SWN++++ + + G H+G L+LF M PDL+T ++V+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEG-LKLFFAMRGLSVDPDLMTLTSVI 304
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC L GR IH Y++ G A D+ + N+L MY GS R+A+ +F+
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAV--------DISVCNSLTQMYLYAGSWREAEKLFS 356
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M KD+ SW MI GY + ++A+D + M + +KPDE+T VLSAC+ G L
Sbjct: 357 RMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 464 GREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G E L +++R ++ + +I+M + +++A ++ +P + N + W +++A
Sbjct: 417 GVELHKLAIKAR--LISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAG 473
Query: 523 SRLH 526
RL+
Sbjct: 474 LRLN 477
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 195/394 (49%), Gaps = 27/394 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL + I++ +L + + G++IH+Y++ TG SL MY + A +F
Sbjct: 299 TLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLF 355
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + C+ ++ ++ MISG+ N K +D + M Q V PD+ T ++ C + +
Sbjct: 356 SRMDCK-DIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++H L K L V + + L+N Y KC+ +++AL +F +P ++V+ W +++ G
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDS 268
+AL FR+M K + + T+T L+A +G G+ +H V++ +G D
Sbjct: 475 RLNNRCFEALIFFRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+P NAL+DMY + + A F ++KD+ SWN ++T + + G + LFDRM+
Sbjct: 534 FLP--NALLDMYVRCGRMNIAWNQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMV 590
Query: 329 SAGFQPDLVTFSTVLPACSH----LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
A +PD +TF ++L C LM+ ++ Y V L K+ +C
Sbjct: 591 KARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNL-KHYAC----------- 638
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G +++A KM D A W ++
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 341/591 (57%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + LQ+C L G+E+H+ +L++G + + +L+ MY+KC ++ AL VF +
Sbjct: 268 TTVGVLQVCTELAQLNLGRELHAALLKSGS-EVNIQCNALLVMYTKCGRVDSALRVFREI 326
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E + ++N+M+S + N + ++F + M + G PD L + +L
Sbjct: 327 D-EKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNG 385
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H K LD D +G+ L++ Y+KC+++E + VF+ + ++D + W ++ YAQ
Sbjct: 386 KEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQS 445
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ALE+FR KEGI + + +L A + + +H ++ G V V
Sbjct: 446 SRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLV-VK 504
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N +ID+YG+ V +L++FE +E+KDI +W S++ + G + L LF M S Q
Sbjct: 505 NRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQ 564
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V ++L A L++L G+++HG+++ +++ ++ +L+DMY+ CG
Sbjct: 565 PDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNF-------HMEEAIVS-SLVDMYSGCG 616
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ A VF + KD+ W MI GM G GK+A+D+F M + + PD V+F+ +L
Sbjct: 617 SLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLY 676
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHS +++G+ +L +M S Y + P EHY CV+D+LGR+GQ EAYE +MP +
Sbjct: 677 ACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKS 736
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VVW +LL A R+H N +LA +AA R+ +LEP + GNYVL+SN++ GK+ ++R +
Sbjct: 737 VVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARI 796
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++ +RK+P CSWIE+ + +HTF + D SH +A+ I +L +T RLR+ G
Sbjct: 797 SERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEG 847
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 256/506 (50%), Gaps = 16/506 (3%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G E+H ++ G+ S +LI MY+KC + A+ VF + +V ++N+MISG
Sbjct: 183 GCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCL 242
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + LD F M++ + + YT +++ C ++ + +++H + K G ++++
Sbjct: 243 QNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ 302
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ LV Y KC ++ AL+VF E+ +D + WN+M++ Y Q G + +A+E M + G
Sbjct: 303 CNALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGG 361
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + SA+ +G+ NG+ VH +K DS V N L+DMY K + + +
Sbjct: 362 FQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSA 421
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ M KD SW +I+T + Q H L +F G + D + ++L ACS L
Sbjct: 422 HVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLE 481
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
++ +Q+H Y + NGL D+ + N ++D+Y +CG + + +F + +KD+
Sbjct: 482 TILLAKQLHCYAIRNGLL---------DLVVKNRIIDIYGECGEVYHSLKMFETVEQKDI 532
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP- 469
+W MI Y G EAL +F+ M ++PD V V +L A L++G+E
Sbjct: 533 VTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGF 592
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
L+ + + I + ++DM G L+ A ++ A+ + + V+W ++ A+ +HG+
Sbjct: 593 LIRRNFHMEEAI--VSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMHGHG 649
Query: 530 DLAEIAAQRVFQ--LEPGHCGNYVLM 553
A +R+ Q + P H L+
Sbjct: 650 KQAIDLFKRMLQTGVTPDHVSFLALL 675
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/497 (29%), Positives = 246/497 (49%), Gaps = 37/497 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGII--DSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
L L A + + +G ++H++ + TG + D T L+ MY KC ++ A +F+ +S
Sbjct: 65 LDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSR 124
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMR---QLGVLPDKYTFPCLIK---------CC 144
VF++NA+I + S+ A + L + MR GV PD T ++K C
Sbjct: 125 -TVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLW 203
C+V HGL K GLD ++ +AL+ Y KC ++ A++VFE + RDV W
Sbjct: 184 CEV---------HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASW 234
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M++G Q G F +AL++FR M + + M+ +T GVL + GR +H ++K
Sbjct: 235 NSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLK 294
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G + + NAL+ MY K V AL +F ++EKD SWNS+++ + Q G + +
Sbjct: 295 SGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEF 353
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
ML GFQPD ++ A HL L++G+++H Y + L D + N
Sbjct: 354 ISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLD--------SDTQVGN 405
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
LMDMY KC + + VF +M KD SW +I Y + EAL++F + +K
Sbjct: 406 TLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKV 465
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D + +L ACS + ++ L R G++ + +ID+ G G++ + ++
Sbjct: 466 DPMMIGSILEACSGLETILLAKQ-LHCYAIRNGLLDLVVKNR-IIDIYGECGEVYHSLKM 523
Query: 504 ALAMPNEANPVVWRTLL 520
+ + V W +++
Sbjct: 524 -FETVEQKDIVTWTSMI 539
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 318 DGTLRLFDRMLSA---GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+G LR R+L++ G P + VL + A+ G Q+H + V G +
Sbjct: 37 EGNLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEG---- 92
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
DD F+ L+ MY KCG + DA+++F MS + V SWN +I Y G EAL ++
Sbjct: 93 --DDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYR 150
Query: 435 CM---CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL--MESRYGVVPTIEHYTCVID 489
M + + PD T VL A SG GR + + ++G+ + +I
Sbjct: 151 AMRLSAASGVAPDGCTLASVLKA---SGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G L+ A + M + + W ++++ +G
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNG 245
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 337/588 (57%), Gaps = 12/588 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC+ L+ A +++ + +H Y+L+ G + + SLI Y K ++ A +F+ L
Sbjct: 199 TCV--LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S EP+V ++N+MI+G N F+ GL+ F M LGV D T ++ C ++ +
Sbjct: 257 S-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +HG K +V + L++ Y KC + A +VF ++ +V W +++ Y +
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + A+ +F M +G+ +TVT ++ A GR VH V+K G S +PV
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 435
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI+MY K V EA +F + KDI SWN+++ + Q + L LF M F+
Sbjct: 436 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFK 494
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T + VLPAC+ LAAL GR+IHG+I+ G D+ + AL+DMY KCG
Sbjct: 495 PDDITMACVLPACAGLAALDKGREIHGHILRRGY--------FSDLHVACALVDMYAKCG 546
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ AQ++F + KKD+ SW +MI GYGM G G EA+ F+ M A ++PDE +F +L+
Sbjct: 547 LLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILN 606
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG L++G +F M + GV P +EHY CV+D+L R G L++AY+ +MP + +
Sbjct: 607 ACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDT 666
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL+ R+H + LAE A+ +F+LEP + YV+++N+Y K+EEV +R M
Sbjct: 667 TIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRM 726
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+++ ++NPGCSWIE+ + F++ + HP+AK I L LT +++
Sbjct: 727 QKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQ 774
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/509 (32%), Positives = 271/509 (53%), Gaps = 16/509 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQLCA + +L+ G+ +HS ++ GI +D L L+ MY C + +F+ +
Sbjct: 101 LQLCAEKKSLEDGKRVHSVIISNGISVDEALG-AKLVFMYVNCGDLVQGRKIFDKIM-ND 158
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
VF +N ++S + + + F M++LGV+ + YTF C++KC + V E K++H
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V KLG + + ++L+ Y K +E A +F+EL DVV WN+M+NG G
Sbjct: 219 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F +M G+ + T+ VL A +G GR +HG VK + V N L+
Sbjct: 279 NGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 338
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A E+F M + I SW SI+ + + G + + LFD M S G +PD+
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T ++++ AC+ ++L GR +H Y++ NG+ N + + NAL++MY KCGS+ +
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN--------LPVTNALINMYAKCGSVEE 450
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF+K+ KD+ SWN MI GY + EAL++F M + + KPD++T VL AC+
Sbjct: 451 ARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAG 509
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +GRE + R G + ++DM + G L A +L M + + + W
Sbjct: 510 LAALDKGREIHGHILRR-GYFSDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWT 567
Query: 518 TLLAASRLH--GNTDLAEIAAQRVFQLEP 544
++A +H GN ++ R+ +EP
Sbjct: 568 VMIAGYGMHGFGNEAISTFNEMRIAGIEP 596
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 207/387 (53%), Gaps = 10/387 (2%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
++ +++ C + ++ + K++H ++ G+ +D +G+ LV Y+ C + + K+F+++
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
V LWN +++ YA+IG F +++ +F++M K G+ + +T T VL +G K +
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VHG V+K+G+ S V+N+LI Y K V A +F+ + E D+ SWNS++ G
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L +F +ML G + DL T +VL AC+++ L GR +HG+ V +
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFS------- 328
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
++V +N L+DMY+KCG++ A VF KM + SW +I Y +G +A+ +F
Sbjct: 329 -EEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDE 387
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M ++PD T ++ AC+ S L +GR+ + + G+ + +I+M + G
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCG 446
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAA 522
+ EA + +P + + V W T++
Sbjct: 447 SVEEARLVFSKIPVK-DIVSWNTMIGG 472
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S ++ L ++ +VL C+ +L G+++H I+ NG++ +D+ + L+ M
Sbjct: 87 SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGIS-------VDEA-LGAKLVFM 138
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y CG + + +F K+ V WN+++ Y G +E++ +F M + + + TF
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 449 VGVL 452
VL
Sbjct: 199 TCVL 202
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 336/589 (57%), Gaps = 17/589 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA +L +G+E+H++++R + +LI MY KC + A +F+ +
Sbjct: 142 LRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDR 201
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ ND +GL+ F MR+L + PD T +I C + ++H
Sbjct: 202 I-SWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHS 260
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + D ++ + ++L+ YL +EA VF + RDVV W +++G K
Sbjct: 261 YVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDK 320
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE ++ M G T+ VLSA +G G +H + + G+ V V N+LID
Sbjct: 321 ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLID 380
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFDRMLSAGFQPD 335
MY K K + +ALEIF + +KD+ SW S++ ++ +C L F +M+ +P+
Sbjct: 381 MYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFE---ALIFFRKMILKS-KPN 436
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT + L AC+ + ALM G++IH + + G+ +G F+ NA++D+Y +CG M
Sbjct: 437 SVTLISALSACARVGALMCGKEIHAHALKAGMGFDG--------FLPNAILDLYVRCGRM 488
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
R A F +++KDV +WNI++ GY G+G +++F M E+++ PD+VTF+ +L AC
Sbjct: 489 RTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCAC 547
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S SG +++G E+ M+ Y + P ++HY CV+D+LGRAG+LNEA+E MP + +P +
Sbjct: 548 SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI 607
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL A R+H + L E+AAQ +F+ + G Y+L+ N+Y GK++EV +R TM++
Sbjct: 608 WGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKE 667
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + +PGCSW+E+K +H F+S D HP+ + I L +++ G
Sbjct: 668 EGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSG 716
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/515 (29%), Positives = 257/515 (49%), Gaps = 26/515 (5%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNN 92
+A ++LC ++ +G+ + +L + + + LS+ +L++M+ + + A VF
Sbjct: 37 VALIRLCENKRGYSEGEYVWKAVLSSLV--TLLSVRLGNALLSMFVRFGDVGNAWNVFGR 94
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E ++F++N ++ G+ F + L ++ + G+ PD YTFP +++ C M ++
Sbjct: 95 MG-ERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVR 153
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H V + D+DV + +AL+ Y+KC + A +F+++P RD + WNAM++GY +
Sbjct: 154 GREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFE 213
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
E + LE+F RM + I T+T V+SA ++G + G +H VV+ YD + V
Sbjct: 214 NDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISV 273
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LI MY EA +F ME +D+ SW +I++ D L + M G
Sbjct: 274 YNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGT 333
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD VT ++VL AC+ L L G ++H G I V + N+L+DMY+KC
Sbjct: 334 MPDEVTIASVLSACASLGQLDMGMKLHELAERTG--------HILYVVVANSLIDMYSKC 385
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+ A +F ++ KDV SW +I G ++ + EAL F M K KP+ VT + L
Sbjct: 386 KRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI-LKSKPNSVTLISAL 444
Query: 453 SACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
SAC+ G L G+E L G +P ++D+ R G++ A L
Sbjct: 445 SACARVGALMCGKEIHAHALKAGMGFDGFLP-----NAILDLYVRCGRMRTA--LNQFNL 497
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
NE + W LL G + +R+ + E
Sbjct: 498 NEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESE 532
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 197/397 (49%), Gaps = 31/397 (7%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVF 90
L T + + C + + G ++HSY++RT D +S+ SLI MY K A VF
Sbjct: 236 LMTMTSVISACELLGDERLGTQLHSYVVRTA-YDGNISVYNSLIQMYLSVGHWKEAESVF 294
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + C +V ++ +ISG N K L+ + M G +PD+ T ++ C + +
Sbjct: 295 SGMECR-DVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQL 353
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K+H L + G L V + ++L++ Y KC+ +E+AL++F ++P +DV+ W +++NG
Sbjct: 354 DMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGL 413
Query: 211 AQIGEFHKALEVFRRM---SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MG 265
+AL FR+M SK + T+ LSA +G G+ +H +K MG
Sbjct: 414 RINNRCFEALIFFRKMILKSKP----NSVTLISALSACARVGALMCGKEIHAHALKAGMG 469
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+D +P NA++D+Y + + AL F + EKD+ +WN ++T + Q G + LF
Sbjct: 470 FDGFLP--NAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFK 526
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN----GLAKNGSCKDIDDVFM 381
RM+ + PD VTF ++L ACS + G + + VN K+ +C
Sbjct: 527 RMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYAC-------- 578
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G + +A +M K D A W ++
Sbjct: 579 ---VVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALL 612
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/597 (35%), Positives = 346/597 (57%), Gaps = 13/597 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T + L L TN+Q+ ++IH+ + + + + IT +IN + + YA VF
Sbjct: 2 TIQTPKSVLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVF 61
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMA 149
N EP+ F YNAMI + S+ + +N MR +L DKYT+P + K C A
Sbjct: 62 NQTQ-EPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFA 120
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V + K++HG++ ++G +LD ++ S+L+N Y+ C + A +VF+E +DVV WNA++ G
Sbjct: 121 VEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITG 180
Query: 210 YAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYD 267
YA+ G + VF+ M + + + + T+ G++ A I K GR +HG ++K M
Sbjct: 181 YARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLR 240
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
GV + ALI++Y K + A ++F+ + EK+ WNS++ + Q G+ + + L M
Sbjct: 241 EGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREM 300
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ +PD T S VL AC+ + A G +H + K I DVF+ AL+D
Sbjct: 301 HLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRF---------AEKKGIWDVFIGTALID 351
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A+ VF +M++++VA+WN ++ GY GQ + A+++FS M E+ +PD +T
Sbjct: 352 MYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSIT 411
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ VL AC+HSG + G+++ LM Y + P +EHY C++D+LGRAG L EA EL M
Sbjct: 412 FLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMM 471
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E N VVW LL+A +HGN ++ E AA + +L G+YV+++N+Y + ++ V
Sbjct: 472 VVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVK 531
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++ + K+ GCS IE+ D +H F+ +D+ HP ++ IY+ L L+ +L+ G
Sbjct: 532 AVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMAG 588
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 314/536 (58%), Gaps = 17/536 (3%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++N++I+ + + L F+ +R+LG++P + +FPC IK C + ++ + H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
F G + D+++ SAL++ Y KC +++A +F+E+PLR+VV W +M+ GY Q +
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 218 KALEVFRRMSKE--------GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AL +F+ +E + + + VLSA + VHG VVK G+D
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V N L+D Y K + ++F+ MEEKD SWNS++ V+ Q G L +F M+
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345
Query: 330 -AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + + VT S VL AC+H AL G+ IH ++ L N V + +++DM
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN--------VCVGTSIIDM 1397
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + A+ F +M +K+V SW M+ GYGM G+ KEALD+F M A +KP+ +TF
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V VL+ACSH+G + +G + M+ +Y + P IEHY C++D+ GRAG LNEAY L M
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VVW +LL A R+H N DL EIAAQ++F+L+P +CG YVL+SN+Y G++ +V
Sbjct: 1518 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 1577
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+ + + K PG S +ELK +H F+ D+ HP + IY L LT L++ G
Sbjct: 1578 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 1633
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 193/391 (49%), Gaps = 39/391 (9%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++IH + + GL D + L++ Y + A+ +F ++ WN ++
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +AL +++ M +GI +FT V+ A G+VVHG ++K G+ V V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------- 325
N LID Y K AL++FE M +++ SW ++++ CG+ R+FD
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Query: 326 ------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
RM + P+ T +++ AC+ + L GR IH Y
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ N C +I V++ AL+DMY+KCGS++DA VF M +K + +WN MI G
Sbjct: 283 AIKN-------CIEIG-VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLG 334
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
+ G G+EAL++FS M +KPD +TF+GVL AC H + +G + M YG+ P
Sbjct: 335 VHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIP 394
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
EHY C+ ++ R+ L+EA++ + + AN
Sbjct: 395 EHYECMTELYARSNNLDEAFKSTKEVGSLAN 425
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 179/348 (51%), Gaps = 35/348 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C N + ++IH+ ++R+G+ + L LI++YS ++ YA+ +F + P
Sbjct: 34 LQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPC 89
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
FT+N +I N + + L + +M G+ DK+TFP +IK C + +++ K +HG
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQF-------------------------------MEE 187
+ K G DV++ + L++ Y KC ++E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+E+P ++VV W AM+NGY + + +ALE+F+RM E I+ + +T+ ++ A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
MG GR +H +K + GV + ALIDMY K + +A+E+FE M K + +WNS+
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+T G L LF M +PD +TF VL AC H+ + G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 191/395 (48%), Gaps = 28/395 (7%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+++ C+ +L G+ H G ++LI+MYSKC Q+K A +F+ +
Sbjct: 1148 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR- 1206
Query: 98 NVFTYNAMISGFYSNDFAFKGL----DFFNHMRQL----GVLPDKYTFPCLIKCCCDVMA 149
NV ++ +MI+G+ N+ A L DF ++ V D ++ C V
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 1266
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +HG V K G D + +G+ L++ Y KC + KVF+ + +D + WN+M+
Sbjct: 1267 KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAV 1326
Query: 210 YAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G +ALEVF M + G+ + T++ VL A G + G+ +H V+KM +
Sbjct: 1327 YAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V ++IDMY K V A + F+ M+EK++ SW +++ + G L +F +M+
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMV 1446
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNN 383
AG +P+ +TF +VL ACSH + G H Y + G+ G
Sbjct: 1447 RAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG------------ 1494
Query: 384 ALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D++ + G + +A + +M K D W ++
Sbjct: 1495 CMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 49/312 (15%)
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
FK+ R +H +++ G + + LI +Y + A+ +F ++ F+WN I+
Sbjct: 40 FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ G + L L+ M+ G D TF V+ AC++ ++ G+ +HG ++ G +
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS-- 157
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM------------------------- 405
DVF+ N L+D Y KCG R A VF KM
Sbjct: 158 ------GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 406 ------SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
K+V SW MI GY + Q +EAL++F M + P+E T V ++ AC+ G
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 460 FLSQGREFLPLMESRYGVVPTIE----HYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L+ GR Y + IE T +IDM + G + +A E+ MP ++ P
Sbjct: 272 ILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-T 325
Query: 516 WRTLLAASRLHG 527
W +++ + +HG
Sbjct: 326 WNSMITSLGVHG 337
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF + C L ++ G+ +H +++ G +LI+ Y KC ++
Sbjct: 126 FTFPFVIKACTNFL-------SIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 86 ALFVFNN----------------LSC--------------EPNVFTYNAMISGFYSNDFA 115
AL VF +SC NV ++ AMI+G+ N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L+ F M+ + P++YT LIK C ++ + + IH K +++ VY+G+AL
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ Y KC +++A++VFE +P + + WN+M+ G +AL +F M + +
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 236 FTVTGVLSALIMMGFFKNG 254
T GVL A + + K G
Sbjct: 359 ITFIGVLCACVHIKNVKEG 377
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A ++ +++ ++ SWNS++ + G+ LR F + G P +F + +CS
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L L+ GR H V G D+F+++AL+DMY+KCG ++DA+ +F ++ +
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFET--------DLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAK--------LKPDEVTFVGVLSACSH 457
+V SW MI GY + Q AL +F E + + D V V VLSACS
Sbjct: 1207 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 1263
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 90/180 (50%), Gaps = 3/180 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ T A L CAH L+ G+ IH +++ + + TS+I+MY KC +++ A
Sbjct: 1351 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKT 1410
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + E NV ++ AM++G+ + A + LD F M + GV P+ TF ++ C
Sbjct: 1411 FDRMK-EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGL 1469
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
V E + + K ++ + +V+ + + + EA + + + ++ D V+W +++
Sbjct: 1470 VEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A + + K +V SWN +I G EAL FS + + L P +F + +CS
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 458 -----SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SG +S + F+ +G + + +IDM + GQL +A L +P N
Sbjct: 1155 LCDLVSGRMSHQQAFV------FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-N 1207
Query: 513 PVVWRTLLAA 522
V W +++
Sbjct: 1208 VVSWTSMITG 1217
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 306/552 (55%), Gaps = 42/552 (7%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L+ Y+ + A VF+ + E NV N MI + +N F +G+ F M V P
Sbjct: 80 LMRAYASLKDVASARKVFDEIP-ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YTFPC++K C ++ +KIHG K+GL +++G+ LV+ Y KC F+ EA V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+ RDVV WN++V GYAQ F ALEV R M I T+ +L A+
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV------- 251
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
S N MY K ++F M +K + SWN ++ V+
Sbjct: 252 ---------------SNTTTENV---MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ + L+ RM + GF+PD V+ ++VLPAC +AL G++IHGYI L
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL----- 340
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
I ++ + NAL+DMY KCG + A+ VF M +DV SW MI YG G+G +A+ +
Sbjct: 341 ---IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
FS + ++ L PD + FV L+ACSH+G L +GR LM Y + P +EH C++D+LG
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG++ EAY M E N VW LL A R+H +TD+ +AA ++FQL P G YVL
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNIY G++EEV +IR+ M+ + ++KNPG S +E+ +HTF+ DRSHP++ IY E
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 613 LHSLTARLREHG 624
L L +++E G
Sbjct: 578 LDVLVKKMKELG 589
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 43/370 (11%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++ +H + L + +G L+ Y + + A KVF+E+P R+V++ N M+ Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + + ++VF M + +T VL A G GR +HG K+G S + V
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+ MYGK + EA + + M +D+ SWNS++ + Q D L + M S
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D T +++LPA S N + +++ MY K
Sbjct: 238 SHDAGTMASLLPAVS----------------------NTTTENV-----------MYVKD 264
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+F KM KK + SWN+MI Y + EA++++S M +PD V+ VL
Sbjct: 265 --------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC + LS G++ +E R ++P + +IDM + G L +A ++ M + +
Sbjct: 317 PACGDTSALSLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-D 374
Query: 513 PVVWRTLLAA 522
V W +++A
Sbjct: 375 VVSWTAMISA 384
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + G++IH + G+ + L++MY KC + A V + +S +
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRD 205
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+++ G+ N L+ M + + D T L+ + V +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKD 264
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ FK+G + +V WN M+ Y + +
Sbjct: 265 MFFKMG--------------------------------KKSLVSWNVMIGVYMKNAMPVE 292
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E++ RM +G ++T VL A G+ +HG + + + + NALID
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ +A ++FE M+ +D+ SW ++++ + G + LF ++ +G PD +
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 339 FSTVLPACSHLAALMHGR 356
F T L ACSH L GR
Sbjct: 413 FVTTLAACSHAGLLEEGR 430
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 33 ATCIAS-LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
A I S L C + L G++IH Y+ R +I + L +LI+MY+KC ++ A VF
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLD---FFNHMRQLGVLPDKYTFPCLIKCC 144
N+ +V ++ AMIS + F+ +G D F+ ++ G++PD F + C
Sbjct: 369 NMKSR-DVVSWTAMISAY---GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAAC 420
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/607 (35%), Positives = 332/607 (54%), Gaps = 46/607 (7%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQ---MKYALFVFNNLSCEPNVFTYNAMISGFYS 111
H+ M++TG+ ++ +++ L+ + + YA+ VF EPN+ +N M+ G S
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQ-EPNLLIWNTMLRGLAS 60
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ L+ + M G +P+ YTFP L+K C E ++IH V KLG +LD Y
Sbjct: 61 SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120
Query: 172 GSALVNTYLKCQFMEEALKVFEE-------------------------------LPLRDV 200
++L++ Y + +E+A KVF+ + RDV
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V WNAM+ GY + + +ALE+F+ M + + T+ VLSA G + GR +H +
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 261 VVKM-GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
V G+ S + ++NA I +Y K V A +FE + KD+ SWN+++ + +
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCKDID 377
L LF ML +G P+ VT +VLPAC+HL A+ GR IH YI + G+ NGS
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVT-NGSA---- 355
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ +L+DMY KCG + A VF M K ++SWN MI G+ M G+ A D+FS M
Sbjct: 356 ---LRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMR 412
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ ++PD++T VG+LSACSHSG L GR + Y + P +EHY C+ID+LG AG
Sbjct: 413 KNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLF 472
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E+ MP E + V+W +LL A ++HGN +LAE AQ++ ++EP + G+YVL+SNIY
Sbjct: 473 KEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIY 532
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G++E+V IR + + ++K PGCS IE+ +H FI D+ HP+++ IY L +
Sbjct: 533 ATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMD 592
Query: 618 ARLREHG 624
L E G
Sbjct: 593 VLLEEAG 599
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 137/289 (47%), Gaps = 6/289 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFN 91
T ++ L CA +++ G+EIH+ + S L I + I +YSKC ++ A +F
Sbjct: 216 GTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE 275
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
LSC+ +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 276 GLSCK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAID 334
Query: 152 EVKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ IH + K G+ + ++L++ Y KC +E A +VF + + + WNAM+ G
Sbjct: 335 IGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFG 394
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYDS 268
+A G + A ++F RM K GI T+ G+LSA G GR + +
Sbjct: 395 FAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITP 454
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ +ID+ G EA EI MM E D W S++ + GN
Sbjct: 455 KLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGN 503
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 306/552 (55%), Gaps = 42/552 (7%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L+ Y+ + A VF+ + E NV N MI + +N F +G+ F M V P
Sbjct: 80 LMRAYASLKDVASARKVFDEIP-ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YTFPC++K C ++ +KIHG K+GL +++G+ LV+ Y KC F+ EA V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+ RDVV WN++V GYAQ F ALEV R M I T+ +L A+
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV------- 251
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
S N MY K ++F M +K + SWN ++ V+
Sbjct: 252 ---------------SNTTTENV---MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ + L+ RM + GF+PD V+ ++VLPAC +AL G++IHGYI L
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL----- 340
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
I ++ + NAL+DMY KCG + A+ VF M +DV SW MI YG G+G +A+ +
Sbjct: 341 ---IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
FS + ++ L PD + FV L+ACSH+G L +GR LM Y + P +EH C++D+LG
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG++ EAY M E N VW LL A R+H +TD+ +AA ++FQL P G YVL
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNIY G++EEV +IR+ M+ + ++KNPG S +E+ +HTF+ DRSHP++ IY E
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 613 LHSLTARLREHG 624
L L +++E G
Sbjct: 578 LDVLVKKMKELG 589
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 43/375 (11%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++ +H + L + +G L+ Y + + A KVF+E+P R+V++ N M+ Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + + ++VF M + +T VL A G GR +HG K+G S + V
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+ MYGK + EA + + M +D+ SWNS++ + Q D L + M S
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D T +++LPA S N + +++ MY K
Sbjct: 238 SHDAGTMASLLPAVS----------------------NTTTENV-----------MYVK- 263
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+F KM KK + SWN+MI Y + EA++++S M +PD V+ VL
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC + LS G++ +E R ++P + +IDM + G L +A ++ M + +
Sbjct: 317 PACGDTSALSLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-D 374
Query: 513 PVVWRTLLAASRLHG 527
V W +++A G
Sbjct: 375 VVSWTAMISAYGFSG 389
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + G++IH + G+ + L++MY KC + A V + +S +
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRD 205
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+++ G+ N L+ M + + D T L+ + V +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKD 264
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ FK+G + +V WN M+ Y + +
Sbjct: 265 MFFKMG--------------------------------KKSLVSWNVMIGVYMKNAMPVE 292
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E++ RM +G ++T VL A G+ +HG + + + + NALID
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ +A ++FE M+ +D+ SW ++++ + G + LF ++ +G PD +
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 339 FSTVLPACSHLAALMHGR 356
F T L ACSH L GR
Sbjct: 413 FVTTLAACSHAGLLEEGR 430
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 314/536 (58%), Gaps = 17/536 (3%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++N++I+ + + L F+ +R+LG++P + +FPC IK C + ++ + H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
F G + D+++ SAL++ Y KC +++A +F+E+PLR+VV W +M+ GY Q +
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 218 KALEVFRRMSKE--------GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AL +F+ +E + + + VLSA + VHG VVK G+D
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V N L+D Y K + ++F+ MEEKD SWNS++ V+ Q G L +F M+
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Query: 330 -AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + + VT S VL AC+H AL G+ IH ++ L N V + +++DM
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYN--------VCVGTSIIDM 2270
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + A+ F +M +K+V SW M+ GYGM G+ KEALD+F M A +KP+ +TF
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V VL+ACSH+G + +G + M+ +Y + P IEHY C++D+ GRAG LNEAY L M
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VVW +LL A R+H N DL EIAAQ++F+L+P +CG YVL+SN+Y G++ +V
Sbjct: 2391 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 2450
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+ + + K PG S +ELK +H F+ D+ HP + IY L LT L++ G
Sbjct: 2451 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 2506
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 193/391 (49%), Gaps = 39/391 (9%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++IH + + GL D + L++ Y + A+ +F ++ WN ++
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +AL +++ M +GI +FT V+ A G+VVHG ++K G+ V V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------- 325
N LID Y K AL++FE M +++ SW ++++ CG+ R+FD
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Query: 326 ------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
RM + P+ T +++ AC+ + L GR IH Y
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ N C +I V++ AL+DMY+KCGS++DA VF M +K + +WN MI G
Sbjct: 283 AIKN-------CIEIG-VYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLG 334
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
+ G G+EAL++FS M +KPD +TF+GVL AC H + +G + M YG+ P
Sbjct: 335 VHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIP 394
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
EHY C+ ++ R+ L+EA++ + + AN
Sbjct: 395 EHYECMTELYARSNNLDEAFKSTKEVGSLAN 425
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 181/348 (52%), Gaps = 35/348 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C N + ++IH+ ++R+G+ + L LI++YS ++ YA+ +F + P
Sbjct: 34 LQNCK---NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQ-NPC 89
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
FT+N +I N + + L + +M G+ DK+TFP +IK C + +++ K +HG
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 159 LVFKLGLDLDVYIGSALVNTYLKC---QF----------------------------MEE 187
+ K G DV++ + L++ Y KC +F ++E
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+E+P ++VV W AM+NGY + + +ALE+F+RM E I+ + +T+ ++ A
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
MG GR +H +K + GV + ALIDMY K + +A+E+FE M K + +WNS+
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+T G L LF M +PD +TF VL AC H+ + G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 201/428 (46%), Gaps = 37/428 (8%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
+ + FSS +F P T+ +C A LC +L G+ H G
Sbjct: 1997 VEALRAFSSLRKLGLIPTRSSF--PCTIKSCSA---LC----DLVSGRMSHQQAFVFGFE 2047
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL----D 120
++LI+MYSKC Q+K A +F+ + NV ++ +MI+G+ N+ A L D
Sbjct: 2048 TDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMITGYVQNEQADNALLLFKD 2106
Query: 121 FFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
F ++ V D ++ C V + +HG V K G D + +G+ L+
Sbjct: 2107 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 2166
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSR 235
+ Y KC + KVF+ + +D + WN+M+ YAQ G +ALEVF M + G+ +
Sbjct: 2167 DAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNA 2226
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T++ VL A G + G+ +H V+KM + V V ++IDMY K V A + F+
Sbjct: 2227 VTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDR 2286
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M+EK++ SW +++ + G L +F +M+ AG +P+ +TF +VL ACSH + G
Sbjct: 2287 MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG 2346
Query: 356 RQI-----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKD 409
H Y + G+ G ++D++ + G + +A + +M K D
Sbjct: 2347 WHWFNAMKHKYDIEPGIEHYG------------CMVDLFGRAGCLNEAYNLIKRMKMKPD 2394
Query: 410 VASWNIMI 417
W ++
Sbjct: 2395 FVVWGSLL 2402
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 142/312 (45%), Gaps = 49/312 (15%)
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
FK+ R +H +++ G + + LI +Y + A+ +F ++ F+WN I+
Sbjct: 40 FKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRA 99
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ G + L L+ M+ G D TF V+ AC++ ++ G+ +HG ++ G +
Sbjct: 100 NTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS-- 157
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMR-------------------------------DAQ 399
DVF+ N L+D Y KCG R +A+
Sbjct: 158 ------GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEAR 211
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+F ++ K+V SW MI GY + Q +EAL++F M + P+E T V ++ AC+ G
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 460 FLSQGREFLPLMESRYGVVPTIE----HYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L+ GR Y + IE T +IDM + G + +A E+ MP ++ P
Sbjct: 272 ILTLGRGI-----HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLP-T 325
Query: 516 WRTLLAASRLHG 527
W +++ + +HG
Sbjct: 326 WNSMITSLGVHG 337
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF + C L ++ G+ +H +++ G +LI+ Y KC ++
Sbjct: 126 FTFPFVIKACTNFL-------SIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRF 178
Query: 86 ALFVFNNL----------------SC--------------EPNVFTYNAMISGFYSNDFA 115
AL VF + SC NV ++ AMI+G+ N
Sbjct: 179 ALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQP 238
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L+ F M+ + P++YT LIK C ++ + + IH K +++ VY+G+AL
Sbjct: 239 EEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTAL 298
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ Y KC +++A++VFE +P + + WN+M+ G +AL +F M + +
Sbjct: 299 IDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDA 358
Query: 236 FTVTGVLSALIMMGFFKNG 254
T GVL A + + K G
Sbjct: 359 ITFIGVLCACVHIKNVKEG 377
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A ++ +++ ++ SWNS++ + G+ LR F + G P +F + +CS
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L L+ GR H V G D+F+++AL+DMY+KCG ++DA+ +F ++ +
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFET--------DLFVSSALIDMYSKCGQLKDARALFDEIPLR 2079
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP--------DEVTFVGVLSACSH 457
+V SW MI GY + Q AL +F E + + D V V VLSACS
Sbjct: 2080 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSR 2136
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A + + K +V SWN +I G EAL FS + + L P +F + +CS
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 458 -----SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SG +S + F+ +G + + +IDM + GQL +A L +P N
Sbjct: 2028 LCDLVSGRMSHQQAFV------FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-N 2080
Query: 513 PVVWRTLLAA 522
V W +++
Sbjct: 2081 VVSWTSMITG 2090
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/617 (34%), Positives = 340/617 (55%), Gaps = 48/617 (7%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM----KYALFVFNNLSCEPNVFTYN 103
+K + S M +G+ ++ ++I+ Y++ Q KY L + +PNV ++
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
A+I+G N + F+ L F M GV P+ T + C ++ + ++IHG K+
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV 391
Query: 164 G-LDLDVYIGSALVNTYLKCQFME-------------------------------EALKV 191
LD D+ +G++LV+ Y KC+ +E EA+++
Sbjct: 392 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIEL 451
Query: 192 FEELPLR----DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
E+ + D++ WN +V G+ Q G+ ALE F+RM G+ + T++G L+A
Sbjct: 452 LSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQ 511
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ K G+ +HG V++ + V +ALI MY + A +F + +D+ WNSI
Sbjct: 512 VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
++ Q G L L M + + + VT + LPACS LAAL G++IH +I+ GL
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 631
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+C F+ N+L+DMY +CGS++ ++ +F M ++D+ SWN+MI YGM G G
Sbjct: 632 ---DTCN-----FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 683
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+A+++F LKP+ +TF +LSACSHSG + +G ++ +M++ Y + P +E Y C+
Sbjct: 684 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 743
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+D+L RAGQ NE E MP E N VW +LL A R+H N DLAE AA+ +F+LEP
Sbjct: 744 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSS 803
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
GNYVLM+NIY A G++E+ IR M+++ V K PGCSWIE+K LH+F+ D SHP +
Sbjct: 804 GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLME 863
Query: 608 SIYAELHSLTARLREHG 624
I A++ SL ++E G
Sbjct: 864 QISAKMESLYFDIKEIG 880
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 264/579 (45%), Gaps = 68/579 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C NL+ G ++H+ ++ G+ + L+ +Y + ++ A +F+ +S E N
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-ERN 154
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF++ A++ + + + F M GV PD + FP + K C ++ K ++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +G + + + ++++ ++KC M+ A + FEE+ +DV +WN MV+GY GEF K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL+ M G+ + T ++S G F+ ++
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS------------------KYFLE 316
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
M G L+ F + ++ SW +++ EQ G L +F +M+ G +P+ +T
Sbjct: 317 MGG--------LKDF----KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRD 397
++ + AC++L+ L HGR+IHGY + +++D D+ + N+L+D Y KC S+
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCI--------KVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ F + + D+ SWN M+ GY + G +EA+++ S M ++PD +T+ G+++ +
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G EF M S G+ P T + L GQ+ L + E + V R
Sbjct: 477 YGDGKAALEFFQRMHS-MGMDPNT---TTISGALAACGQVRN-----LKLGKEIHGYVLR 527
Query: 518 TLLAAS--------RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ S ++ D E+A +L + + + G+ LD+
Sbjct: 528 NHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDL 587
Query: 570 RHTMRQQNVRKN--------PGCSWI-ELKDG--LHTFI 597
M NV N P CS + L+ G +H FI
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 181/357 (50%), Gaps = 35/357 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++ C + + L+ G+EIH Y ++ +DS L + SL++ Y+KC ++ A F
Sbjct: 364 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 423
Query: 93 LS----------------------------------CEPNVFTYNAMISGFYSNDFAFKG 118
+ EP++ T+N +++GF
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L+FF M +G+ P+ T + C V + K+IHG V + ++L +GSAL++
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y C +E A VF EL RDVV+WN++++ AQ G AL++ R M+ + ++ T+
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
L A + + G+ +H +++ G D+ ++N+LIDMYG+ + ++ IF++M +
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+D+ SWN +++V+ G + LF + + G +P+ +TF+ +L ACSH + G
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 3/278 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T +L C NL+ G+EIH Y+LR I S ++LI+MYS C ++ A VF+
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS +V +N++IS + + LD M V + T + C + A+ +
Sbjct: 560 LSTR-DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K+IH + + GLD +I ++L++ Y +C ++++ ++F+ +P RD+V WN M++ Y
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVP 271
G A+ +F++ G+ + T T +LSA G + G + + + D V
Sbjct: 679 HGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ + E LE E M E + W S++
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 334 PD--LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD + ++++L C L L G Q+H +VVNG+ D+ + F+ + L+++Y +
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV-------DVCE-FLGSRLLEVYCQ 136
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + DA+ +F KMS+++V SW ++ Y G +E + +F M ++PD F V
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKV 196
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAM 507
ACS G++ M S E +CV +DM + G+++ A +
Sbjct: 197 FKACSELKNYRVGKDVYDYMLS-----IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 508 PNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+ + +W +++ G L I+ ++ ++P ++S Y G++EE
Sbjct: 252 EFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEE 309
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 320/545 (58%), Gaps = 17/545 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + NVF++N++I+ + + + L F+ MR+L + P++ TFPC IK C ++
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ ++ H G + D+++ SALV+ Y KC + +A +F+E+ R++V W +M+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 209 GYAQIGEFHKALEVFRRM-----SKEG---IWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
GY Q + H+AL +F+ EG + + + VLSA + VHG
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++K G++ + V N L+D Y K +G + +F+ M E+D+ SWNSI+ V+ Q G +
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 321 LRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ +F RM+ G + VT S VL AC+H + G+ IH ++ GL N V
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESN--------V 398
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ +++DMY KCG + A+ F +M +K+V SW+ M+ GYGM G KEAL++F M A
Sbjct: 399 FVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMA 458
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+KP+ +TFV VL+ACSH+G L +G + M + V P +EHY C++D+LGRAG L E
Sbjct: 459 GVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKE 518
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A++L M + VVW LL A R+H N DL EI+A+++F+L+P +CG YVL+SNIY
Sbjct: 519 AFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYAD 578
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
G++E+V +R M+ + K PG S +++K +H F+ DR HP+ + IY L L+ +
Sbjct: 579 AGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMK 638
Query: 620 LREHG 624
L+E G
Sbjct: 639 LQEVG 643
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 185/360 (51%), Gaps = 19/360 (5%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
+ + FSS S TF P + +C A L +L G++ H L G
Sbjct: 134 VEALRAFSSMRKLSLKPNRSTF--PCAIKSCSALL-------DLHSGRQAHQQALIFGFE 184
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
++L++MYSKC +++ A +F+ +S N+ ++ +MI+G+ ND A + L F
Sbjct: 185 PDLFVSSALVDMYSKCGELRDARTLFDEIS-HRNIVSWTSMITGYVQNDDAHRALLLFKE 243
Query: 125 --MRQLG------VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + G V D ++ C V + +HG + K G + D+ + + L+
Sbjct: 244 FLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLM 303
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSR 235
+ Y KC + + +VF+ + RDV+ WN+++ YAQ G +++E+F RM K+G I +
Sbjct: 304 DAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 363
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T++ VL A G + G+ +H V+KMG +S V V ++IDMY K V A + F+
Sbjct: 364 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 423
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M EK++ SW++++ + G+ L +F M AG +P+ +TF +VL ACSH L G
Sbjct: 424 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 483
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ T A L CAH + + G+ IH +++ G+ + TS+I+MY KC +++ A
Sbjct: 361 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 420
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + E NV +++AM++G+ + A + L+ F M GV P+ TF ++ C
Sbjct: 421 FDRMR-EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ E + + ++ V +V+ + +++EA + + + LR D V+W A++
Sbjct: 480 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 319/574 (55%), Gaps = 10/574 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH+ + + G L + + MY K ++ F + E N+ + N ++SGF
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIE-NLASRNNLLSGFC 167
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ +G + G P+ YTF ++K C + E K IHG V K G++ D +
Sbjct: 168 DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++LVN Y KC A KVF E+P RDVV W A++ G+ G + L +F +M EG
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEG 286
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +T +L + + G+ VH +VK D V AL+DMY K + + +A
Sbjct: 287 FNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAE 346
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
IF + ++D+F+W I+ + Q G + ++ F +M G +P+ T ++ L CS +A
Sbjct: 347 TIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIA 406
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L GRQ+H + G + D+F+ +AL+DMY KCG + DA++VF + +D
Sbjct: 407 TLDSGRQLHSMAIKAGQS--------GDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDT 458
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I GY GQG +AL F M + PDEVTF+GVLSACSH G + +G++
Sbjct: 459 VSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNS 518
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ YG+ PTIEHY C++D+LGRAG+ +E M +N ++W T+L A ++HGN +
Sbjct: 519 LSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE 578
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
E AA ++F+LEP NY+L+SN++ A G +++V ++R M + V+K PGCSW+E+
Sbjct: 579 FGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 638
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+S D SHP+ + I+ +L L +L G
Sbjct: 639 GQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 672
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 184/324 (56%), Gaps = 2/324 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L+ CA + +L +G+ IH ++++GI SL+N+Y+KC YA VF +
Sbjct: 193 TFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEI 252
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++ A+I+GF + + GL FN M G P+ YTF +++ C + V
Sbjct: 253 P-ERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + K LD + ++G+ALV+ Y K +F+E+A +F L RD+ W +V GYAQ
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ KA++ F +M +EG+ + FT+ LS + +GR +H + +K G + V
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K CV +A +F+ + +D SWN+I+ + Q G L+ F+ ML G
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 334 PDLVTFSTVLPACSHLAALMHGRQ 357
PD VTF VL ACSH+ + G++
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKK 514
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 232/470 (49%), Gaps = 12/470 (2%)
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
+++ GI +SL+N+Y KC ++ A V + + +V +N +S S +
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQ-DVQQWNQKLSSANSPYPLQE 73
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+ F MR + +++ F LI + + IH V K G + D+ I +A V
Sbjct: 74 AVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVT 133
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y+K Q +E + F+ + + ++ N +++G+ + + ++ EG + +T
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+L G G+ +HG V+K G + + N+L+++Y K A ++F +
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
E+D+ SW +++T G G LR+F++ML+ GF P++ TF ++L +CS L+ + G+Q
Sbjct: 254 ERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H IV N L N F+ AL+DMY K + DA+ +F ++ K+D+ +W +++
Sbjct: 313 VHAQIVKNSLDGND--------FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIV 364
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY DGQG++A+ F M +KP+E T LS CS L GR+ L M + G
Sbjct: 365 AGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQ 423
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + ++DM + G + +A E+ + V W T++ HG
Sbjct: 424 SGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHG 472
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 168/314 (53%), Gaps = 9/314 (2%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+KKI V K G+ D ++ S+LVN Y+KC+ ++ A +V EE+P++DV WN ++
Sbjct: 8 LKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANS 67
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+A+++F M I +++F ++SA +G G +H V K G++S + +
Sbjct: 68 PYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NA + MY K + V + F+ M +++ S N++++ D R+ ++L GF
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF 187
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P++ TF ++L C+ L G+ IHG ++ +G+ D + N+L+++Y KC
Sbjct: 188 EPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINP--------DSHLWNSLVNVYAKC 239
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS A VF ++ ++DV SW +I G+ +G G L +F+ M P+ TF+ +L
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISIL 298
Query: 453 SACSHSGFLSQGRE 466
+CS + G++
Sbjct: 299 RSCSSLSDVDLGKQ 312
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 349/592 (58%), Gaps = 15/592 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKC-CQMKYALFVFNNLSCE 96
+ C+++ N+ G+ I ++L+TG +S + + +LI+M+ K ++ A VF+ + +
Sbjct: 49 FRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP-D 107
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV T+ MI+ F F+ +D F M G +PD++T ++ C ++ + ++
Sbjct: 108 RNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQF 167
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKC---QFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
H LV K GLDLDV +G +LV+ Y KC +++A KVF+ +P+ +V+ W A++ GY Q
Sbjct: 168 HCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQS 227
Query: 214 GEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + A+E+F M + + + FT + VL A + G V+ +VVKM S V
Sbjct: 228 GGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCV 287
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LI MY + + A + F+++ EK++ S+N+I+ + + N + LF+ + AG
Sbjct: 288 GNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGT 347
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ TF+++L S + A+ G QIH I+ +G N + + NAL+ MY++C
Sbjct: 348 GVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN--------LHICNALISMYSRC 399
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ A VF +M +V SW MI G+ G AL+ F M EA + P+EVT++ VL
Sbjct: 400 GNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVL 459
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSH G +S+G + M+ +G+VP +EHY CV+D+LGR+G L EA EL +MP +A+
Sbjct: 460 SACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKAD 519
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+V RT L A R+HGN DL + AA+ + + +P Y+L+SN++ + G++EEV +IR
Sbjct: 520 ALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKK 579
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+++N+ K GCSWIE+++ +H F D SHP+A+ IY EL L +++E G
Sbjct: 580 MKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELG 631
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 231/436 (52%), Gaps = 16/436 (3%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ +++A+IS + +N+ AF+ + F M + G P++Y F + + C + + K I
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65
Query: 158 GLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
G + K G + DV +G AL++ ++K +E A KVF+ +P R+VV W M+ + Q+G
Sbjct: 66 GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
A+++F M G RFT++GV+SA MG GR H +V+K G D V V +
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185
Query: 276 LIDMYGK---GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD-GTLRLFDRMLSAG 331
L+DMY K V +A ++F+ M ++ SW +I+T + Q G D + LF M+
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ 245
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ TFS+VL AC++L+ + G Q++ +V LA + +C + N+L+ MY++
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA-SINC-------VGNSLISMYSR 297
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG+M +A+ F + +K++ S+N ++ Y +EA ++F+ + A + TF +
Sbjct: 298 CGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASL 357
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LS S G + +G + + + G + +I M R G + A+++ M +
Sbjct: 358 LSGASSIGAIGKGEQIHSRI-LKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEM-GDG 415
Query: 512 NPVVWRTLLAASRLHG 527
N + W +++ HG
Sbjct: 416 NVISWTSMITGFAKHG 431
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 180/345 (52%), Gaps = 24/345 (6%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD+V W+A+++ YA + +A+ F M + G + + + TGV A G+++
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 258 HGIVVKMGY-DSGVPVMNALIDMYGKGKC-VGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
G ++K GY +S V V ALIDM+ KG + A ++F+ M ++++ +W ++T +Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ LF M+ +G+ PD T S V+ AC+ + L GRQ H ++ +GL D
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGL-------D 177
Query: 376 IDDVFMNNALMDMYTKC---GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ-GKEALD 431
+ DV + +L+DMY KC GS+ DA+ VF +M +V SW +I GY G +EA++
Sbjct: 178 L-DVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIE 236
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV---- 487
+F M + ++KP+ TF VL AC++ + G + L+ V + CV
Sbjct: 237 LFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV-----VKMRLASINCVGNSL 291
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
I M R G + A + A + E N V + T++ A N++ A
Sbjct: 292 ISMYSRCGNMENARK-AFDVLFEKNLVSYNTIVNAYAKSLNSEEA 335
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 34/295 (11%)
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M ++D+ SW+++++ + + F ML GF P+ F+ V ACS+ +
Sbjct: 1 MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC-GSMRDAQMVFTKMSKKDVASW 413
G+ I G+++ G ++ DV + AL+DM+ K G + A VF +M ++V +W
Sbjct: 61 GKIIFGFLLKTGYFES-------DVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTW 113
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+MI + G ++A+D+F M + PD T GV+SAC+ G LS GR+F L+
Sbjct: 114 TLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLV-M 172
Query: 474 RYGVVPTIEHYTCVIDMLGRA---GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ G+ + ++DM + G +++A ++ MP N + W ++ G D
Sbjct: 173 KSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQSGGCD 231
Query: 531 LAEIAAQRVF------QLEPGH---------CGNYVLMSNIYVAGGKYEEVLDIR 570
I +F Q++P H C N +S+I++ Y V+ +R
Sbjct: 232 REAI---ELFLEMVQGQVKPNHFTFSSVLKACAN---LSDIWLGEQVYALVVKMR 280
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 343/629 (54%), Gaps = 17/629 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PF L C L + + G EIHS+ G+ T+L++ Y+KC +
Sbjct: 110 YTYPFVLKACSGLLAI-------EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A +F+++S +V +NAMI+G + M++ G+ P+ T ++
Sbjct: 163 AQRLFSSMS-HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ A+ K +HG + D V +G+ L++ Y KCQ + A K+F+ + +R+ V W+A
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSA 281
Query: 206 MVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+ GY +ALE+F +M K+ + + T+ VL A + GR +H ++K+
Sbjct: 282 MIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G + + N L+ MY K + +A+ F+ M KD S+++I++ Q GN L +F
Sbjct: 342 GXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +G PDL T VLPACSHLAAL HG HGY++V G A D + NA
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT--------DTLICNA 453
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY+KCG + A+ VF +M + D+ SWN MI+GYG+ G G EAL +F + LKPD
Sbjct: 454 LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 513
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
++TF+ +LS+CSHSG + +GR + M + +VP +EH C++D+LGRAG ++EA+
Sbjct: 514 DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP E + +W LL+A R+H N +L E ++++ L P GN+VL+SNIY A G+++
Sbjct: 574 RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWD 633
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ IR T + ++K PGCSWIE+ +H F+ D+SH + I +L L ++ G
Sbjct: 634 DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693
Query: 625 DCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
+ D E+ LY E +A
Sbjct: 694 YQAECSFVFQDVEEEEKEQILLYHSEKLA 722
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/495 (31%), Positives = 256/495 (51%), Gaps = 22/495 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLR-TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C +L + ++IH + L+ T DS + + L +Y C Q+ A +F+ + P
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSV-LHKLTRLYLSCNQVVLARRLFDEIP-NP 72
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N +I + N +D ++ M LGV P+KYT+P ++K C ++A+ + +IH
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL+ DV++ +ALV+ Y KC + EA ++F + RDVV WNAM+ G + G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+++ +M +EGI + T+ GVL + +G+ +HG V+ +D+GV V L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDL 336
DMY K +C+ A +IF++M ++ SW++++ + L LFD+M L P
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTP 312
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT +VL AC+ L L GR++H YI+ G + D+ + N L+ MY KCG +
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYIIKLGX--------VLDILLGNTLLSMYAKCGVID 364
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA F M+ KD S++ ++ G +G AL +F M + + PD T +GVL ACS
Sbjct: 365 DAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEAN 512
H L G Y +V T + IDM + G+++ A E+ M + +
Sbjct: 425 HLAALQHG-----FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM-DRHD 478
Query: 513 PVVWRTLLAASRLHG 527
V W ++ +HG
Sbjct: 479 IVSWNAMIIGYGIHG 493
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 193/404 (47%), Gaps = 12/404 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ C ++ E KKIH K + D + L YL C + A ++F+E+P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V+LWN ++ YA G F A++++ M G+ +++T VL A + ++G +H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
G +S V V AL+D Y K + EA +F M +D+ +WN+++ G D
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
++L +M G P+ T VLP AL HG+ +HGY V NG V
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF-DNG-------V 245
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC-E 438
+ L+DMY KC + A+ +F M ++ SW+ MI GY KEAL++F M +
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILK 305
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ P VT VL AC+ LS+GR+ L + G V I ++ M + G ++
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRK-LHCYIIKLGXVLDILLGNTLLSMYAKCGVID 364
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+A M N + V + +++ +GN +A ++ R+ QL
Sbjct: 365 DAIRFFDXM-NPKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQL 406
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/635 (33%), Positives = 348/635 (54%), Gaps = 66/635 (10%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA--------- 104
+H+ ++++G + LI+ YSKC ++ VF+ + + N++T+N+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP-QRNIYTWNSVVTGLTKLG 100
Query: 105 ----------------------MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
M+SGF +D + L +F M + G + ++Y+F ++
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + + + ++H L+ K DVYIGSALV+ Y KC + +A +VF+E+ R+VV
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN+++ + Q G +AL+VF+ M + + T+ V+SA + K G+ VHG VV
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 263 KMG-YDSGVPVMNALIDMYGKGKCVGEALEIFE--------------------------- 294
K + + + NA +DMY K + EA IF+
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 295 ----MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
M E+++ SWN+++ + Q G ++ L LF + P +F+ +L AC+ LA
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G Q H +++ +G + DD+F+ N+L+DMY KCG + + +VF KM ++D
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSG--EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI+G+ +G G EAL++F M E+ KPD +T +GVLSAC H+GF+ +GR +
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +GV P +HYTC++D+LGRAG L EA + MP + + V+W +LLAA ++H N
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L + A+++ ++EP + G YVL+SN+Y GK+E+V+++R +MR++ V K PGCSWI+++
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
H F+ D+SHP K I++ L L A +R D
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQD 673
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 239/529 (45%), Gaps = 98/529 (18%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F L D F L+ C ++ + V+ +H V K G +++I + L++ Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS------------ 227
KC +E+ +VF+++P R++ WN++V G ++G +A +FR M
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 228 -------------------KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
KEG ++ ++ VLSA + G VH ++ K + S
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + +AL+DMY K V +A +F+ M ++++ SWNS++T EQ G L +F ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ +PD VT ++V+ AC+ L+A+ G+++HG +V N +N D+ ++NA +DM
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN-------DIILSNAFVDM 298
Query: 389 YTKCGSMRDAQMV-------------------------------FTKMSKKDVASWNIMI 417
Y KC +++A+ + FTKM++++V SWN +I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC-----------SHSGFLSQGRE 466
GY +G+ +EAL +F + + P +F +L AC +H L G +
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA--ASR 524
F + G I +IDM + G + E Y L E + V W ++ A
Sbjct: 419 F------QSGEEDDIFVGNSLIDMYVKCGCVEEGY-LVFRKMMERDCVSWNAMIIGFAQN 471
Query: 525 LHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+GN L +F+ LE G +++ M + A G V + RH
Sbjct: 472 GYGNEAL------ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 200/418 (47%), Gaps = 47/418 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ ++ KG ++HS + ++ + ++L++MYSKC + A VF+ + + N
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRN 217
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++I+ F N A + LD F M + V PD+ T +I C + A+ +++HG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 159 LVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-------------------- 197
V K L D+ + +A V+ Y KC ++EA +F+ +P+
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 198 -----------RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
R+VV WNA++ GY Q GE +AL +F + +E + + ++ +L A
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 247 MMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+ G H V+K G+ + + V N+LIDMY K CV E +F M E+D
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
SWN+++ Q G + L LF ML +G +PD +T VL AC H + GR
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH--- 514
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ + ++ + D + ++D+ + G + +A+ + +M + D W ++
Sbjct: 515 --YFSSMTRDFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 50/322 (15%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFV 89
TLA+ I++ CA + ++ GQE+H +++ + + + ++ + ++MY+KC ++K A F+
Sbjct: 255 TLASVISA---CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 90 FNNLS------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
F+++ E NV ++NA+I+G+ N + L
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDV-------MAVLEVKKIHGLVFKLGLDLDVYIG 172
F +++ V P Y+F ++K C D+ A + V K HG F+ G + D+++G
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK-HGFKFQSGEEDDIFVG 430
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++L++ Y+KC +EE VF ++ RD V WNAM+ G+AQ G ++ALE+FR M + G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM----NALIDMYGKGKCVGE 288
T+ GVLSA GF + GR M D GV + ++D+ G+ + E
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGR---HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 289 ALEIFEMME-EKDIFSWNSIMT 309
A + E M + D W S++
Sbjct: 548 AKSMIEEMPMQPDSVIWGSLLA 569
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 343/623 (55%), Gaps = 31/623 (4%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N + + + L+ CA + L+ G ++H++ L++ + T+ ++MY+KC M
Sbjct: 231 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 290
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A +F+ S N +YNAMI+G+ + FK L F+ + G+ D+ + + +
Sbjct: 291 QDAQILFDK-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C V + E +I+ L K L LDV + +A ++ Y KCQ + EA +VF+E+ RD V W
Sbjct: 350 CALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 409
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NA++ + Q G+ ++ L +F M + I FT VL A G G +H +VK
Sbjct: 410 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVK 468
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEA----------------LEIFEMMEEKDI----FS 303
G S V +LIDMY K + EA +E E M K + S
Sbjct: 469 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVS 528
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNSI++ + + LF RM+ G PD T++TVL C++LA+ G+QIH ++
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L DV++++ L+DMY+KCG + D++++F K ++D +WN MI GY
Sbjct: 589 KKELQS--------DVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 640
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G+G+EA+ +F M +KP+ VTF+ +L AC+H G + +G E+ +M+ YG+ P + H
Sbjct: 641 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 700
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH-GNTDLAEIAAQRVFQL 542
Y+ ++D+LG++G++ A EL MP EA+ V+WRTLL +H N ++AE A + +L
Sbjct: 701 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 760
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P Y L+SN+Y G +E+V D+R MR ++K PGCSW+ELKD LH F+ D++
Sbjct: 761 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 820
Query: 603 HPEAKSIYAELHSLTARLREHGD 625
HP + IY EL + + ++ D
Sbjct: 821 HPRWEEIYEELGLIYSEMKPFDD 843
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 259/530 (48%), Gaps = 34/530 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C+ + G +IH ++R G ++ ++L++MY+K + +L VF + E N
Sbjct: 145 LKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKN 203
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++A+I+G N+ L FF M+++ + + +++ C + + ++H
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D + +A ++ Y KC M++A +F++ + +NAM+ GY+Q K
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFK 323
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F R+ G+ +++GV A ++ G ++ + +K V V NA ID
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAID 383
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK + + EA +F+ M +D SWN+I+ HEQ G TL LF ML + +PD T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL AC+ +L +G +IH IV +G+A N S + +L+DMY+KCG + +A
Sbjct: 444 FGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSS--------VGCSLIDMYSKCGMIEEA 494
Query: 399 QMVFT----------------KMSKKDV----ASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + + KM K + SWN +I GY M Q ++A +F+ M E
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ PD+ T+ VL C++ G++ + + + + + ++DM + G L+
Sbjct: 555 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE-LQSDVYISSTLVDMYSKCGDLH 613
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGH 546
++ L + V W ++ HG + A +R+ ++P H
Sbjct: 614 DS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 662
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/493 (29%), Positives = 242/493 (49%), Gaps = 42/493 (8%)
Query: 42 CAHQTNLQKGQEIHSYMLRTG--------------------------IIDS-PL----SI 70
CA Q L+ G++ H++M+ +G + D PL S
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+IN Y+K M A F FN + +V ++N+M+SG+ N K ++ F M + G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVR-DVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGT 134
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D TF ++K C + +IHG+V ++G D DV SAL++ Y K + E+L+
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ +P ++ V W+A++ G Q AL+ F+ M K +S+ VL + +
Sbjct: 195 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +H +K + + V A +DMY K + +A +F+ E + S+N+++T
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q + L LF R++S+G D ++ S V AC+ + L G QI+ + + L+
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL- 373
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + NA +DMY KC ++ +A VF +M ++D SWN +I + +G+G E L
Sbjct: 374 -------DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 426
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++++PDE TF VL AC+ G L G E + + G+ +IDM
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDM 484
Query: 491 LGRAGQLNEAYEL 503
+ G + EA ++
Sbjct: 485 YSKCGMIEEAEKI 497
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 198/409 (48%), Gaps = 22/409 (5%)
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
HM G P + CL++ + + +VF DV + ++N Y K
Sbjct: 31 HMILSGFRPTTFVLNCLLQVYTNSRDFVSA----SMVFDRMPLRDVVSWNKMINGYAKSN 86
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
M +A F +P+RDVV WN+M++GY Q GE K++EVF M + G T +L
Sbjct: 87 NMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILK 146
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
+ G +HG+VV++G D+ V +AL+DMY KGK E+L +F+ + EK+ S
Sbjct: 147 VCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 206
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W++I+ Q L+ F M +++VL +C+ L+ L G Q+H + +
Sbjct: 207 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 266
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+ A +G + A +DMY KC +M+DAQ++F K + S+N MI GY +
Sbjct: 267 KSDFAADG--------IVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQE 318
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +AL +F + + L DE++ GV AC+ LS+G + L + ++
Sbjct: 319 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDL-----AIKSSLSL 373
Query: 484 YTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
CV IDM G+ L EA+ + M + V W ++AA +G
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMRRR-DAVSWNAIIAAHEQNGK 421
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 320/591 (54%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L KG+++HSY+++ GI + +L+++Y C +K A +F
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV +N M+ F D + F M+ G++P+++T+P +++ C V A+
Sbjct: 376 QTE-NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG 434
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G +VY+ S L++ Y K ++ A + L DVV W A+++GYAQ
Sbjct: 435 EQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQH 494
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +AL+ F+ M GI + +SA + GR +H GY + +
Sbjct: 495 NLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIG 554
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+ +Y + + EA FE ++ KD SWN +++ Q G + L++F +M A +
Sbjct: 555 NALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLE 614
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
TF + + A +++A + G+QIH I+ G D+ ++NAL+ Y KCG
Sbjct: 615 ASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFD--------SDIEVSNALITFYAKCG 666
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA+ F +M +K+ SWN MI GY G G EA+++F M + P+ VTFVGVLS
Sbjct: 667 SIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLS 726
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G +++G + M +G+VP HY CV+D++ RAG L+ A + MP E +
Sbjct: 727 ACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDA 786
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+WRTLL+A +H N ++ E AAQ + +LEP YVL+SN+Y GK++ R M
Sbjct: 787 TIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMM 846
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R + V+K PG SWIE+K+ +H F DR HP A IY L L + E G
Sbjct: 847 RNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIG 897
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 249/502 (49%), Gaps = 14/502 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F P+ ++ ++ C G+++H+ + + G +L+ +YS+
Sbjct: 210 FPTPYVFSSVLSG---CTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVS 266
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + + V ++N++ISG F+ L+ F M++ + PD T L+ C
Sbjct: 267 AEKVFSKMQSKDEV-SFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACA 325
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
A+ + +++H V K G+ D+ + AL++ Y+ C ++ A ++F +VVLWN
Sbjct: 326 SNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNV 385
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M+ + ++ ++ +FR+M +G+ ++FT +L +G G +H V+K G
Sbjct: 386 MLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTG 445
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ V V + LIDMY K + A I + E D+ SW ++++ + Q L+ F
Sbjct: 446 FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFK 505
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
ML+ G Q D + FS+ + AC+ + AL GRQIH V+G + +D+ + NAL
Sbjct: 506 EMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYS--------EDLSIGNAL 557
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ +Y +CG +++A + F K+ KD SWN +I G+ G ++AL +F+ M AKL+
Sbjct: 558 VSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASF 617
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TF +SA ++ + QG++ ++ R G IE +I + G + +A
Sbjct: 618 FTFGSAVSAAANIANIKQGKQIHAMIIKR-GFDSDIEVSNALITFYAKCGSIEDARREFC 676
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
MP E N V W ++ HG
Sbjct: 677 EMP-EKNDVSWNAMITGYSQHG 697
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 240/485 (49%), Gaps = 12/485 (2%)
Query: 39 LQLCA-HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C+ H+ ++ ++IH+ ++ G++ SP+ LI +Y+K + A VF+NL C
Sbjct: 118 LRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNL-CTK 176
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ AMISGF N + + + F M G+ P Y F ++ C + +++H
Sbjct: 177 DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLH 236
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
LVFK G L+ Y+ +ALV Y + A KVF ++ +D V +N++++G AQ G
Sbjct: 237 ALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSD 296
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
ALE+F +M ++ + TV +LSA G G +H V+K G S + V AL+
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALL 356
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D+Y + A E+F + +++ WN ++ + N + R+F +M G P+
Sbjct: 357 DLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQF 416
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ ++L C+ + AL G QIH ++ G N V++ + L+DMY K G +
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFN--------VYVCSVLIDMYAKHGKLDT 468
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A ++ +++ DV SW +I GY EAL F M ++ D + F +SAC+
Sbjct: 469 AHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAG 528
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L+QGR+ + G + ++ + R G++ EAY L + + + W
Sbjct: 529 IQALNQGRQ-IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY-LEFEKIDAKDSISWN 586
Query: 518 TLLAA 522
L++
Sbjct: 587 GLISG 591
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 244/496 (49%), Gaps = 16/496 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I L LC + +L + +++H +L+ G + + L+++Y + + VF ++
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 94 SCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC-DVMAV 150
PN V +++ +ISGF + + LD F+ M + V P + +F +++ C + +
Sbjct: 72 ---PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH + GL I + L+ Y K + A KVF+ L +D V W AM++G+
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGF 188
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+Q G +A+ +F M GI+ + + + VLS + F G +H +V K G
Sbjct: 189 SQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLET 248
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL+ +Y + A ++F M+ KD S+NS+++ Q G DG L LF +M
Sbjct: 249 YVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRD 308
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD VT +++L AC+ AL G Q+H Y++ G++ D+ + AL+D+Y
Sbjct: 309 YLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGIS--------SDMIVEGALLDLYV 360
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
C ++ A +F ++V WN+M++ +G E+ +F M L P++ T+
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L C+ G L G + + + G + + +IDM + G+L+ A+ + L E
Sbjct: 421 ILRTCTSVGALDLGEQ-IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAH-VILRTLTE 478
Query: 511 ANPVVWRTLLAASRLH 526
+ V W L++ H
Sbjct: 479 DDVVSWTALISGYAQH 494
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 196/399 (49%), Gaps = 11/399 (2%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M G+ + T+ L+ C + +++E KK+HG + KLG + + + LV+ Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
++ +KVFE++P R V W+ +++G+ + ++ L++F M +E + + + VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 245 LIMMGF-FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
+ +H ++ G + N LI +Y K + A ++F+ + KD S
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W ++++ Q G + + LF M +AG P FS+VL C+ + G Q+H +
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
K GS + ++ NAL+ +Y++ + A+ VF+KM KD S+N +I G
Sbjct: 241 -----KYGSSL---ETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G AL++F+ M LKPD VT +LSAC+ +G L +G + + + G+ +
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYV-IKAGISSDMIV 351
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++D+ + A+E+ L E N V+W +L A
Sbjct: 352 EGALLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVMLVA 389
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 319/599 (53%), Gaps = 15/599 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLA+ + + C+ L GQ++H+Y + G + +L+N+Y+KC ++ AL F
Sbjct: 374 TLASLVVA---CSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF 430
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
E NV +N M+ + D F M+ ++P++YT+P ++K C + +
Sbjct: 431 LETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 489
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH + K L+ Y+ S L++ Y K ++ A + +DVV W M+ GY
Sbjct: 490 ELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 549
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL FR+M GI +T +SA + K G+ +H G+ S +
Sbjct: 550 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 609
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
P NAL+ +Y K + EA FE E D +WN++++ +Q GN++ LR+F RM
Sbjct: 610 PFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNRE 669
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + TF + + A S A + G+Q+H I G + + NA++ MY
Sbjct: 670 GIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS--------ETEVCNAIISMYA 721
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ DA+ F ++S K+ SWN MI Y G G EALD F M + ++P+ VT VG
Sbjct: 722 KCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 781
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G + +G E+ M + YG+ P EHY CV+DML RAG L+ A + L MP E
Sbjct: 782 VLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIE 841
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ +VWRTLL+A +H N ++ E AA + +LEP YVL+SN+Y K++ R
Sbjct: 842 PDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTR 901
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
M+++ V+K PG SWIE+K+ +H+F D++HP A I+ LT R E G DC
Sbjct: 902 QKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDC 960
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 245/501 (48%), Gaps = 18/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C +L+ G+++H +L+ G +L+++Y + A
Sbjct: 271 PYAFSSVLSA---CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+S + + TYN +I+G + K ++ F M+ G+ PD T L+ C
Sbjct: 328 IFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDG 386
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLG + I AL+N Y KC +E AL F E + +VVLWN M+
Sbjct: 387 TLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + + + +FR+M E I +++T +L I +G + G +H ++K +
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + LIDMY K + A +I KD+ SW +++ + Q D L F +ML
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + D V + + AC+ L AL G+QIH V+G + D+ NAL+ +
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS--------DLPFQNALVTL 618
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCG++ +A + F + D +WN ++ G+ G +EAL +F+ M + + TF
Sbjct: 619 YSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE--LALA 506
+ A S + + QG++ ++ ++ G E +I M + G +++A + L L+
Sbjct: 679 GSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELS 737
Query: 507 MPNEANPVVWRTLLAASRLHG 527
M NE V W ++ A HG
Sbjct: 738 MKNE---VSWNAMINAYSKHG 755
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 234/489 (47%), Gaps = 15/489 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ ++ G+ S + LI++YS+ + A VF+ L + + ++ AMISG
Sbjct: 190 EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHS-SWVAMISGLSK 248
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N+ + + F M LG++P Y F ++ C + ++ +++HGLV KLG D Y+
Sbjct: 249 NECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 308
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV+ Y + A +F + RD V +N ++NG +Q G KA+E+F+RM +G+
Sbjct: 309 CNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGL 368
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ ++ A G +G+ +H K+G+ S + AL+++Y K + AL
Sbjct: 369 EPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALN 428
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E +++ WN ++ + + + R+F +M P+ T+ ++L C L
Sbjct: 429 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 488
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH I+ N ++ + L+DMY K G + A + + + KDV
Sbjct: 489 LELGEQIHSQIIKTSFQLNA--------YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 540
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY +AL F M + ++ DEV +SAC+ L +G++ +
Sbjct: 541 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQ 599
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + ++ + + G + EAY LA + + W L++ + GN +
Sbjct: 600 ACVSGFSSDLPFQNALVTLYSKCGNIEEAY-LAFEQTEAGDNIAWNALVSGFQQSGNNE- 657
Query: 532 AEIAAQRVF 540
A RVF
Sbjct: 658 ---EALRVF 663
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 240/480 (50%), Gaps = 18/480 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +G+++HS +L+ G ++ L++ Y + AL VF+ + E +FT+N MI
Sbjct: 83 SLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMP-ERTIFTWNKMI 141
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGL 165
S + K F M V P++ TF +++ C + V++IH + GL
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL 201
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ + L++ Y + F++ A +VF+ L L+D W AM++G ++ +A+ +F
Sbjct: 202 GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCD 261
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M GI + + + VLSA + + G +HG+V+K+G+ S V NAL+ +Y
Sbjct: 262 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGS 321
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A IF M ++D ++N+++ QCG + + LF RM G +PD T ++++ A
Sbjct: 322 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVA 381
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L G+Q+H Y G A N + AL+++Y KC + A F +
Sbjct: 382 CSSDGTLFSGQQLHAYTTKLGFASNDK--------IEGALLNLYAKCSDIETALNYFLET 433
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V WN+M++ YG+ + + +F M ++ P++ T+ +L C G L G
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493
Query: 466 EF-LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++++ + + Y C +IDM + G+L+ A+++ + + + V W T++A
Sbjct: 494 QIHSQIIKTSF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 548
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 201/427 (47%), Gaps = 29/427 (6%)
Query: 106 ISGFYSNDFAFK--GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKIHGLVFK 162
IS S D +F+ G+D + G+ P+ T L++ C L E +K+H + K
Sbjct: 40 ISVSISEDESFQENGID---SVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 96
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
LG D + + L++ YL ++ ALKVF+E+P R + WN M+ A K +
Sbjct: 97 LGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCL 156
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-------VHGIVVKMGYDSGVPVMNA 275
F RM E + + T +GVL A + G V +H ++ G V N
Sbjct: 157 FGRMVNENVTPNEGTFSGVLEAC------RGGSVAFDVVEQIHARIIYQGLGKSTIVCNP 210
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LID+Y + V A +F+ + KD SW ++++ + +RLF M G P
Sbjct: 211 LIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPT 270
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
FS+VL AC + +L G Q+HG ++ G + D ++ NAL+ +Y GS+
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS--------DTYVCNALVSLYFHLGSL 322
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+ +F+ MS++D ++N +I G G G++A+++F M L+PD T ++ AC
Sbjct: 323 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S G L G++ L ++ G + ++++ + + A L E N V+
Sbjct: 383 SSDGTLFSGQQ-LHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVE-NVVL 440
Query: 516 WRTLLAA 522
W +L A
Sbjct: 441 WNVMLVA 447
>gi|242059069|ref|XP_002458680.1| hypothetical protein SORBIDRAFT_03g038060 [Sorghum bicolor]
gi|241930655|gb|EES03800.1| hypothetical protein SORBIDRAFT_03g038060 [Sorghum bicolor]
Length = 552
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/540 (41%), Positives = 324/540 (60%), Gaps = 19/540 (3%)
Query: 54 IHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+H++++ +G + SP TSL+++Y + + + P + +NA +S ++
Sbjct: 27 LHAHLVVSGRLAASPAVTTSLVSLYVRGPAALHPAVPLLLPASAP-LPCFNAALSLPHA- 84
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
L F + PD ++FP + A ++ +H L + GL D++
Sbjct: 85 ----LALPLFRRLLAAHS-PDAFSFPPIFS---SAPASPQLLALHALALRFGLVHDLFCA 136
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-I 231
SAL+ L+ + A ++F+EL RDVV+WN+MVNG+ ++G F +A E FR+M +EG +
Sbjct: 137 SALLRGCLRFGLADHAHRLFDELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREEGGV 196
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+S FTVTG+LS F G VHG+ VK G+D V NALID+YGK V +A
Sbjct: 197 EISSFTVTGILSMCTATADFGRGAAVHGLSVKSGFDKEASVCNALIDLYGKCHRVHDATM 256
Query: 292 IFEMMEE--KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+FE + + KD+FSWNS+++ H+ +H GT+RLF RM PD VT + VLPAC+
Sbjct: 257 VFEGLPDTDKDLFSWNSMLSAHQYSADHTGTMRLFARMRRTALLPDAVTVAAVLPACAQT 316
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AAL GR++HGYIV +GLA +G+ DVF NAL DMY K G + DA VF ++D
Sbjct: 317 AALQVGREVHGYIVTSGLACDGAL----DVFACNALADMYAKSGGLDDACRVFDWTRQRD 372
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
VASWNIMI GY G G+EAL +F M E L PDEVT +G LSACSHSG L +G+ FL
Sbjct: 373 VASWNIMIDGYASHGHGQEALMLFHQMIEEGLVPDEVTLLGALSACSHSGLLEEGKGFLK 432
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M+ +G+ P +EHY CV DMLGRAG+L+EA ++ + + WRT LAA R+HG+
Sbjct: 433 RMKEEFGLEPQLEHYACVTDMLGRAGRLDEARKV-IEEAGDVGAGAWRTYLAACRMHGDK 491
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+ A+ AA+ + E G +VL++N Y G +EE+ ++R M++Q V+K GCSW+E+
Sbjct: 492 ERAQEAARMLMMAEESGSGGWVLLANTYGWDGNFEELEEVREEMKRQGVQKAAGCSWVEV 551
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 14/295 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T L +C + +G +H +++G +LI++Y KC ++ A VF L
Sbjct: 202 TVTGILSMCTATADFGRGAAVHGLSVKSGFDKEASVCNALIDLYGKCHRVHDATMVFEGL 261
Query: 94 S-CEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ ++F++N+M+S YS D + F MR+ +LPD T ++ C A+
Sbjct: 262 PDTDKDLFSWNSMLSAHQYSADHTGT-MRLFARMRRTALLPDAVTVAAVLPACAQTAALQ 320
Query: 152 EVKKIHGLVFKLGL----DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++HG + GL LDV+ +AL + Y K +++A +VF+ RDV WN M+
Sbjct: 321 VGREVHGYIVTSGLACDGALDVFACNALADMYAKSGGLDDACRVFDWTRQRDVASWNIMI 380
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+GYA G +AL +F +M +EG+ T+ G LSA G + G+ G + +M +
Sbjct: 381 DGYASHGHGQEALMLFHQMIEEGLVPDEVTLLGALSACSHSGLLEEGK---GFLKRMKEE 437
Query: 268 SGV-PVMN---ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
G+ P + + DM G+ + EA ++ E + +W + + G+ +
Sbjct: 438 FGLEPQLEHYACVTDMLGRAGRLDEARKVIEEAGDVGAGAWRTYLAACRMHGDKE 492
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 338/587 (57%), Gaps = 10/587 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+Q A L++G+++H+ ++ G L+NMYSKC ++ +AL +F+ + + N
Sbjct: 12 IQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP-QRN 70
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMISG N + + F MR G +P ++ F I+ C + ++ K++H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G+ ++++GS L + Y KC M +A KVFEE+P +D V W AM++GY++IGEF +
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL F++M E + + + + L A + K GR VH VVK+G++S + V NAL D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 279 MYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + A +F + E +++ S+ ++ + + + L +F + G +P+
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TFS+++ AC++ AAL G Q+H ++ +D F+++ L+DMY KCG +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFD--------EDPFVSSILVDMYGKCGLLEH 362
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F ++ +WN ++ +G G GK+A+ F M + +KP+ +TF+ +L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G ++ M+ YGVVP EHY+CVID+LGRAG+L EA E MP E N W
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+ L A R+HG+ ++ ++AA+++ +LEP + G VL+SNIY ++E+V +R MR N
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PG SW+++ H F + D SH +IY +L L +++ G
Sbjct: 543 VKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAG 589
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 200/411 (48%), Gaps = 21/411 (5%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
M+S +S+ + FS T G + T ++++ CA +++ G+++H L+
Sbjct: 77 MISGLSQNSKFSEAIR--TFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 134
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
GI ++L +MYSKC M A VF + C+ V ++ AMI G+ + L
Sbjct: 135 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV-SWTAMIDGYSKIGEFEEALL 193
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F M V D++ + C + A + +H V KLG + D+++G+AL + Y
Sbjct: 194 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 253
Query: 181 KCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
K ME A VF + R+VV + +++GY + + K L VF + ++GI + FT +
Sbjct: 254 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 313
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
++ A + G +H V+K+ +D V + L+DMYGK + A++ F+ + +
Sbjct: 314 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDP 373
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI- 358
+WNS+++V Q G ++ F+RM+ G +P+ +TF ++L CSH + G
Sbjct: 374 TEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 433
Query: 359 ----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
Y VV G ++ SC ++D+ + G +++A+ +M
Sbjct: 434 YSMDKTYGVVPG-EEHYSC-----------VIDLLGRAGRLKEAKEFINRM 472
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L C + G+ +HS +++ G +L +MYSK M+ A VF S
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 271
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV +Y +I G+ + KGL F +R+ G+ P+++TF LIK C + A+ + ++
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 331
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K+ D D ++ S LV+ Y KC +E A++ F+E+ + WN++V+ + Q G
Sbjct: 332 HAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 391
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNA 275
A++ F RM G+ + T +L+ G + G + + G G +
Sbjct: 392 KDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 451
Query: 276 LIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ID+ G+ + EA E M E + F W S +
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 343/629 (54%), Gaps = 17/629 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PF L C L + + G EIHS+ G+ T+L++ Y+KC +
Sbjct: 110 YTYPFVLKACSGLLAI-------EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A +F+++S +V +NAMI+G + M++ G+ P+ T ++
Sbjct: 163 AQRLFSSMS-HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVG 221
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ A+ K +HG + D V +G+ L++ Y KCQ + A K+F+ + +R+ V W+A
Sbjct: 222 EAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSA 281
Query: 206 MVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+ GY +ALE+F +M K+ + + T+ VL A + GR +H ++K+
Sbjct: 282 MIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKL 341
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G + + N L+ MY K + +A+ F+ M KD S+++I++ Q GN L +F
Sbjct: 342 GSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIF 401
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +G PDL T VLPACSHLAAL HG HGY++V G A D + NA
Sbjct: 402 RMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT--------DTLICNA 453
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY+KCG + A+ VF +M + D+ SWN MI+GYG+ G G EAL +F + LKPD
Sbjct: 454 LIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPD 513
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
++TF+ +LS+CSHSG + +GR + M + +VP +EH C++D+LGRAG ++EA+
Sbjct: 514 DITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFI 573
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP E + +W LL+A R+H N +L E ++++ L P GN+VL+SNIY A G+++
Sbjct: 574 RNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWD 633
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ IR T + ++K PGCSWIE+ +H F+ D+SH + I +L L ++ G
Sbjct: 634 DAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLG 693
Query: 625 DCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
+ D E+ LY E +A
Sbjct: 694 YQAECSFVFQDVEEEEKEQILLYHSEKLA 722
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 259/495 (52%), Gaps = 22/495 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLR-TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C +L + ++IH + L+ T DS + + L +Y C Q+ A +F+ + P
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSV-LHKLTRLYLSCNQVVLARRLFDEIP-NP 72
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N +I + N +D ++ M LGV P+KYT+P ++K C ++A+ + +IH
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL+ DV++ +ALV+ Y KC + EA ++F + RDVV WNAM+ G + G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+++ +M +EGI + T+ GVL + +G+ +HG V+ +D+GV V L+
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLL 252
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDL 336
DMY K +C+ A +IF++M ++ SW++++ + L LFD+M L P
Sbjct: 253 DMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTP 312
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT +VL AC+ L L GR++H YI+ K GS + D+ + N L+ MY KCG +
Sbjct: 313 VTLGSVLRACAKLTDLSRGRKLHCYII-----KLGS---VLDILLGNTLLSMYAKCGVID 364
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA F +M+ KD S++ ++ G +G AL +F M + + PD T +GVL ACS
Sbjct: 365 DAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACS 424
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEAN 512
H L G Y +V T + IDM + G+++ A E+ M + +
Sbjct: 425 HLAALQHG-----FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM-DRHD 478
Query: 513 PVVWRTLLAASRLHG 527
V W ++ +HG
Sbjct: 479 IVSWNAMIIGYGIHG 493
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 193/404 (47%), Gaps = 12/404 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ C ++ E KKIH K + D + L YL C + A ++F+E+P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V+LWN ++ YA G F A++++ M G+ +++T VL A + ++G +H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
G +S V V AL+D Y K + EA +F M +D+ +WN+++ G D
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
++L +M G P+ T VLP AL HG+ +HGY V NG V
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSF-DNG-------V 245
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC-E 438
+ L+DMY KC + A+ +F M ++ SW+ MI GY KEAL++F M +
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILK 305
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ P VT VL AC+ LS+GR+ L + G V I ++ M + G ++
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRK-LHCYIIKLGSVLDILLGNTLLSMYAKCGVID 364
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+A M N + V + +++ +GN +A ++ R+ QL
Sbjct: 365 DAIRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVA-LSIFRMMQL 406
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 347/599 (57%), Gaps = 18/599 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FT A A+L + A + +G ++H+ +++ G+ + SLIN+Y KC ++ A
Sbjct: 197 NSFTFA---AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 253
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +V T+N+MISG+ +N + L F MR V + +F +IK C ++
Sbjct: 254 ILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANL 312
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
+ +++H V K G D I +AL+ Y KC M +AL++F+E L +VV W AM
Sbjct: 313 KELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAM 372
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ Q +A+ +F M ++G+ + FT + +L+AL ++ + VH VVK Y
Sbjct: 373 ISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNY 428
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V AL+D Y K V EA ++F ++ KDI +W++++ + Q G + +++F
Sbjct: 429 ERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSE 488
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G +P+ TFS++L C+ A M G+Q HG+ + + L + + +++AL
Sbjct: 489 LTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSS--------LCVSSAL 540
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G + A+ VF + +KD+ SWN MI GY GQ +ALD+F M + K+K D
Sbjct: 541 LTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDS 600
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+GV +AC+H+G + +G ++ +M + PT EH +C++D+ RAGQL +A ++
Sbjct: 601 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVID 660
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MPN A +WRT+LAA R+H T+L +AA+++ + P YVL+SN+Y G ++E
Sbjct: 661 NMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQE 720
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++NV+K PG SWIE+K+ + F++ DRSHP IY +L L+ RL++ G
Sbjct: 721 RAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 779
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 233/484 (48%), Gaps = 25/484 (5%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H ++ G +D TSL++ Y K K VF+ + E NV T+ +ISG+
Sbjct: 116 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK-ERNVVTWTTLISGYA 174
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + L F M+ G P+ +TF + + ++H +V K GLD +
Sbjct: 175 RNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 234
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++L+N YLKC + +A +F++ ++ VV WN+M++GYA G +AL +F M
Sbjct: 235 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNH 294
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +S + ++ + + +H VVK G+ + AL+ Y K + +AL
Sbjct: 295 VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDAL 354
Query: 291 EIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+F E ++ SW ++++ Q + + LF M G +P+ T+S +L A
Sbjct: 355 RLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTAL--- 411
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ ++H +V ++ + + AL+D Y K G + +A VF+ + KD
Sbjct: 412 -PVISPSEVHAQVVKTNYERSST--------VGTALLDAYVKLGKVDEAAKVFSGIDNKD 462
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH-SGFLSQGREFL 468
+ +W+ M+ GY G+ + A+ +FS + + +KP+E TF +L+ C+ + + QG++F
Sbjct: 463 IVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQF- 521
Query: 469 PLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ + ++ CV + M + G + A E+ E + V W ++++
Sbjct: 522 ----HGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEV-FKRQREKDLVSWNSMISGYA 576
Query: 525 LHGN 528
HG
Sbjct: 577 QHGQ 580
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 225/452 (49%), Gaps = 16/452 (3%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
++ YA +F+ S + + +Y +++ GF + + F +++ LG+ D F ++
Sbjct: 46 RLYYAHNLFDK-SPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVL 104
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K + L +++H K G DV +G++LV+TY+K ++ VF+E+ R+VV
Sbjct: 105 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVV 164
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W +++GYA+ + L +F RM EG + FT L L G G VH +V
Sbjct: 165 TWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 224
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
VK G D +PV N+LI++Y K V +A +F+ E K + +WNS+++ + G L
Sbjct: 225 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 284
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
+F M + +F++++ C++L L Q+H +V G + D +
Sbjct: 285 GMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGF--------VFDQNI 336
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
ALM Y+KC +M DA +F + +V SW MI G+ + +EA+ +FS M
Sbjct: 337 RTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
++P+E T+ +L+A +S ++++ Y T+ T ++D + G+++EA
Sbjct: 397 VRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEA 451
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ + N+ + V W +LA G T+ A
Sbjct: 452 AKVFSGIDNK-DIVAWSAMLAGYAQAGETEAA 482
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/590 (35%), Positives = 333/590 (56%), Gaps = 16/590 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA + L+ G+E+HS+ L++ + T+ ++MY+KC +M A V +++ + ++ +
Sbjct: 292 CAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP-KCSLQS 350
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
YNA+I G+ +D F+ L F + + G+ D+ T + C + LE +++HGL
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K ++ + +A+++ Y KC+ + EA +F+ + RD V WNA++ Q G + L
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDM 279
F M + FT VL A G +H ++K MG+DS V AL+DM
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA--ALVDM 528
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K + +A +I + E+K + SWN+I++ + + F RML G PD T+
Sbjct: 529 YCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTY 588
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ VL C++LA + G+QIH I+ L DV++ + L+DMY+KCG+M+D+Q
Sbjct: 589 AAVLDTCANLATVGLGKQIHAQIIKQELQS--------DVYICSTLVDMYSKCGNMQDSQ 640
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
++F K +D +WN M+ GY G G+EAL +F M +KP+ TFV VL AC+H G
Sbjct: 641 LMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMG 700
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G + +M S YG+ P EHY+C++D+LGR+G+++EA L MP EA+ V+WR L
Sbjct: 701 LVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNL 760
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L+ ++HGN ++AE A + + QL+P VL+SNIY G + V ++R MR ++
Sbjct: 761 LSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLK 820
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
K PGCSWIELKD +H F+ D+ HP + IY +L L ++ G DC
Sbjct: 821 KEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDC 870
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/519 (29%), Positives = 267/519 (51%), Gaps = 13/519 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F A+ L+ C G ++H +++ G ++ ++L+ MY+KC ++ +L V
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L E N +++AMI+G ND +GL+ F M+ +GV + + L + C + A
Sbjct: 239 FSELP-EKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSA 297
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H K D+ +G+A ++ Y KC M +A KV +P + +NA++ G
Sbjct: 298 LRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVG 357
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ +AL+ F+ + K G+ T++G L+A + GR VHG+ VK S
Sbjct: 358 YARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSN 417
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NA++DMYGK K + EA ++F+MME +D SWN+I+ EQ GN + TL F M+
Sbjct: 418 ICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIH 477
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+ +PD T+ +VL AC+ AL G +IH I+ +G+ D F+ AL+DMY
Sbjct: 478 SRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGF--------DSFVGAALVDMY 529
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + A + + +K + SWN +I G+ + Q ++A FS M E + PD T+
Sbjct: 530 CKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYA 589
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL C++ + G++ + + + + + ++DM + G + ++ + PN
Sbjct: 590 AVLDTCANLATVGLGKQIHAQI-IKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPN 648
Query: 510 EANPVVWRTLLAASRLH--GNTDLAEIAAQRVFQLEPGH 546
+ V W +L H G L + ++ ++P H
Sbjct: 649 R-DFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNH 686
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 156/563 (27%), Positives = 271/563 (48%), Gaps = 53/563 (9%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
NFST + NQT P + T Q C+ Q +L G++ H+ M+ G + L+
Sbjct: 34 NFSTLAQNQT-QPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQ 92
Query: 76 MYSKCCQMKYALFVFNNL----------------SC--------------EPNVFTYNAM 105
MY KC + YA VF+ + SC E +V ++N++
Sbjct: 93 MYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSV 152
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-----CDVMAVLEVKKIHGLV 160
ISGF N K +D F M + GV D+ + ++K C CD M V ++HGLV
Sbjct: 153 ISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECD-MGV----QVHGLV 207
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K G D DV GSAL+ Y KC+ ++++L VF ELP ++ V W+AM+ G Q + L
Sbjct: 208 VKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGL 267
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
E+F+ M G+ +S+ + + + + G+ +H +K + S + V A +DMY
Sbjct: 268 ELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMY 327
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + +A ++ M + + S+N+I+ + + L+ F +L G D +T S
Sbjct: 328 AKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLS 387
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
L AC+ + + GRQ+HG + V ++ + C + NA++DMY KC ++ +A
Sbjct: 388 GALNACASIRGDLEGRQVHG-LAVKSISMSNIC-------VANAILDMYGKCKALAEASD 439
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F M ++D SWN +I +G +E L F+ M ++++PD+ T+ VL AC+
Sbjct: 440 LFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQA 499
Query: 461 LSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L+ G E +++S G + ++DM + G + +A ++ + V W +
Sbjct: 500 LNTGMEIHTRIIKSGMGFDSFVG--AALVDMYCKCGMIEKADKIH-DRTEQKTMVSWNAI 556
Query: 520 LAASRLHGNTDLAEIAAQRVFQL 542
++ L ++ A R+ ++
Sbjct: 557 ISGFSLLQQSEDAHKFFSRMLEM 579
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 196/379 (51%), Gaps = 12/379 (3%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV +++++ Y C M+ A K F E+P RDVV WN++++G+ Q GE K+++VF M
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ R ++ VL A + G VHG+VVK G+D V +AL+ MY K K +
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
++L +F + EK+ SW++++ Q + L LF M G ++++ +C+
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L+AL G+++H + + + D+ + A +DMY KCG M DAQ V + M K
Sbjct: 294 ALSALRLGKELHSHALKSAFGS--------DIIVGTATLDMYAKCGRMADAQKVLSSMPK 345
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ S+N +I+GY +G +AL F + + L DE+T G L+AC+ +GR+
Sbjct: 346 CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQV 405
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L + I ++DM G+ L EA +L M + V W ++AA +G
Sbjct: 406 HGLAVKSIS-MSNICVANAILDMYGKCKALAEASDL-FDMMERRDAVSWNAIIAACEQNG 463
Query: 528 NTD--LAEIAAQRVFQLEP 544
N + LA A+ ++EP
Sbjct: 464 NEEETLAHFASMIHSRMEP 482
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 328/589 (55%), Gaps = 41/589 (6%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQ 82
T + P+ L SL L + + Q ++IHS +++TG+ ++ +++ LI S
Sbjct: 22 TSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGN 81
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YAL +F ++ +PN F +N MI G + +DF+ M GV P+ YTFP L+K
Sbjct: 82 LSYALLLFESIE-QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK-------------------CQ 183
C V A E K+IHG V KLGL+ D ++ ++L+N Y +
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200
Query: 184 F------------MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
F +++A ++FEE+P+RD V WNAM+ GYAQ G F +AL F+ M + +
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANV 260
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T+ VLSA G + G V + G S + ++NALIDMY K + +A +
Sbjct: 261 APNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARD 320
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+FE + EKDI SWN ++ + ++ L LF +M + +P+ VTF ++LPAC++L A
Sbjct: 321 LFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+ IH YI L + + + +L+DMY KCG++ A+ VF M K +
Sbjct: 381 LDLGKWIHAYIDKKFLG-------LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN MI G M G AL++F M + +PD++TFVGVLSACSH+G + GR+ M
Sbjct: 434 SWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSM 493
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
Y + P ++HY C+ID+LGRAG +EA L M + + +W +LL A R+HGN +L
Sbjct: 494 VEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVEL 553
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
E AA+ +F+LEP + G YVL+SNIY G++++V IR + + ++K
Sbjct: 554 GEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/601 (33%), Positives = 346/601 (57%), Gaps = 18/601 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +++LQ C T ++ G+ IH+ +L++ +LI MY+ C QM+ A VF ++
Sbjct: 253 TFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSM 312
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V ++N ++SG ND ++ F M+ G PD+ + +I +L
Sbjct: 313 LFKDCV-SWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG 371
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H K G+D +++IG++L++ Y KC ++ FE +P +D++ W ++ GYAQ
Sbjct: 372 MEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN 431
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
AL + R++ E + + + +L A + K + +HG V+K G + + +
Sbjct: 432 ECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQ 490
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG----TLRLFDRMLS 329
NA++++YG+ V A +FE + KDI SW S++T C H+G L LF+ ++
Sbjct: 491 NAIVNVYGELALVDYARHVFESINSKDIVSWTSMIT----CCVHNGLAIEALELFNSLIE 546
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+PDL+T +VL A + L++L G++IHG+++ G G + N+L+DMY
Sbjct: 547 TNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEG--------LIANSLVDMY 598
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+CG+M +A+ +F + ++D+ W MI GM G GK+A+D+FS M + + PD +TF+
Sbjct: 599 ARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFL 658
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L ACSHSG + +G++ +M++ Y + P EHY C++D+L R+ L EAY MP
Sbjct: 659 ALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPI 718
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + VW LL A R+H N DL E+AA+++ QL + GNYVL+SN + A G++ +V ++
Sbjct: 719 EPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEV 778
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAG 629
R M+ ++K PGCSWIE+++ +HTF++ D+SHP+ +IY +L T L+E G A
Sbjct: 779 RSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQ 838
Query: 630 T 630
T
Sbjct: 839 T 839
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 229/455 (50%), Gaps = 13/455 (2%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT-GI 63
IS F S +F T T P A A L+LCA L +GQ++H++ L+T
Sbjct: 20 ISLKEAFQSLTHFFTDPLPTTTRFPLQQAYSQA-LELCASHKALPQGQQLHAHFLKTQNY 78
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
+DS T ++MY KC A+ VF+ +S E +FT+NAMI S + ++ +
Sbjct: 79 LDSVFLDTKFVHMYGKCGSFYDAVKVFDKMS-ERTIFTWNAMIGACVSAGRYVEAIELYK 137
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
MR LGV D +TFPC++K C +IHG+ K G V++ +AL+ Y KC
Sbjct: 138 EMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCG 197
Query: 184 FMEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
+ A +F+ + D V WN++++ + GE +AL +FRRM + G+ + +T
Sbjct: 198 DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSA 257
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L A F K GR +H +++K + + V V NALI MY + +A +F+ M KD
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SWN++++ Q + + F M +G +PD V+ ++ A A L+ G ++H Y
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ +G+ N + + N+L+DMY KC ++ F M +KD+ SW +I GY
Sbjct: 378 AIKHGIDSN--------MHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYA 429
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+ +AL++ + K+ D + +L ACS
Sbjct: 430 QNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 128/279 (45%), Gaps = 25/279 (8%)
Query: 253 NGRVVHGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
G+ +H +K Y V + + MYGK +A+++F+ M E+ IF+WN+++
Sbjct: 64 QGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGAC 123
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G + + L+ M G D TF VL AC G +IHG V G
Sbjct: 124 VSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGF- 182
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEA 429
VF+ NAL+ MY KCG + A+++F M K D SWN +I + +G+ EA
Sbjct: 183 -------VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEA 235
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV-- 487
L +F M E ++ + TFV L AC F+ GR + V+ H+T V
Sbjct: 236 LSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGI-------HAVILKSNHFTDVYV 288
Query: 488 ----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
I M GQ+ +A + +M + + V W TLL+
Sbjct: 289 SNALIAMYANCGQMEDAERVFKSMLFK-DCVSWNTLLSG 326
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T ++ L A ++L+KG+EIH +++R G L SL++MY++C M+ A +FN
Sbjct: 553 LITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFN 612
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++ + +MI+ + +D F+ M VLPD TF L+ C V+
Sbjct: 613 YVK-QRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVV 671
Query: 152 EVKKIHGLVFKLGLDLDVYIG--SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E K+ H + K L+ + + LV+ + +EEA +P+ +W A++
Sbjct: 672 EGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALL 729
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/589 (35%), Positives = 335/589 (56%), Gaps = 35/589 (5%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S +++++ +K ++ A VF ++ EP+ ++NAM+SGF +D + L FF M
Sbjct: 86 FSYNAVLSVLTKFGKLDEAFNVFKSMP-EPDQCSWNAMVSGFAQHDRFEEALRFFVDMHS 144
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ ++Y+F + C + + +IH L+ K LDVY+GSALV+ Y KC +
Sbjct: 145 EDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVAC 204
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A + F+ + +R++V WN+++ Y Q G KALEVF M G+ T+ V+SA
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACAS 264
Query: 248 MGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME--------- 297
+ G +H VVK Y + + + NAL+DMY K + V EA +F+ M
Sbjct: 265 WSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETS 324
Query: 298 ----------------------EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
EK++ SWN+++ + Q G ++ +RLF + P
Sbjct: 325 MVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +L AC++LA L GRQ H I+ +G + D+F+ N+L+DMY KCG +
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSG--EESDIFVGNSLIDMYMKCGMV 442
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D +VF +M ++DV SWN MI+GY +G G AL++F M + KPD VT +GVLSAC
Sbjct: 443 EDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSAC 502
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + +GR + M + G+ P +H+TC++D+LGRAG L+EA +L MP + + VV
Sbjct: 503 SHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVV 562
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LLAA ++HGN +L + A+++ +++P + G YVL+SN+Y G++++V+ +R MRQ
Sbjct: 563 WGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQ 622
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWIE++ +H F+ D+ HP K I+ L LT +++ G
Sbjct: 623 RGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAG 671
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 185/396 (46%), Gaps = 69/396 (17%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D F L+ C + ++ ++IH + K +++I + LV+ Y KC + E+A KVF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 193 EELPLR-------------------------------DVVLWNAMVNGYAQIGEFHKALE 221
+ +P R D WNAMV+G+AQ F +AL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
F M E ++ ++ LSA + G +H ++ K Y V + +AL+DMY
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYS 197
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K V A F+ M ++I SWNS++T +EQ G L +F M+ G +PD +T ++
Sbjct: 198 KCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC--------- 392
V+ AC+ +A+ G QIH +V +N D+ + NAL+DMY KC
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRN-------DLVLGNALVDMYAKCRRVNEARLV 310
Query: 393 ----------------------GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
S++ A+++F+ M +K+V SWN +I GY +G+ +EA+
Sbjct: 311 FDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAV 370
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+F + + P TF +L+AC++ L GR+
Sbjct: 371 RLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 184/359 (51%), Gaps = 39/359 (10%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA T+L G +IH+ + ++ + ++L++MYSKC + A F+ ++
Sbjct: 156 SALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ ++N++I+ + N A K L+ F M GV PD+ T ++ C A+ E +I
Sbjct: 216 -NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQI 274
Query: 157 HGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR----------------- 198
H V K D+ +G+ALV+ Y KC+ + EA VF+ +PLR
Sbjct: 275 HARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAAS 334
Query: 199 --------------DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+VV WNA++ GY Q GE +A+ +F + +E IW + +T +L+A
Sbjct: 335 VKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNA 394
Query: 245 LIMMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ K GR H ++K G+ +S + V N+LIDMY K V + +FE M E
Sbjct: 395 CANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVE 454
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+D+ SWN+++ + Q G L +F +ML +G +PD VT VL ACSH + GR+
Sbjct: 455 RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRR 513
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 43/225 (19%)
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D F+ +L +C + + R+IH I+ + ++F+ N L+D Y KCG
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSS--------EIFIQNRLVDAYGKCGY 69
Query: 395 MRDAQMVFTKMSKK-------------------------------DVASWNIMILGYGMD 423
DA+ VF +M ++ D SWN M+ G+
Sbjct: 70 FEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQH 129
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM-ESRYGVVPTIE 482
+ +EAL F M +E +F LSAC+ L+ G + L+ +SRY + +
Sbjct: 130 DRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRY--LLDVY 187
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ ++DM + G + A M N V W +L+ +G
Sbjct: 188 MGSALVDMYSKCGVVACAQRAFDGMAVR-NIVSWNSLITCYEQNG 231
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/617 (35%), Positives = 338/617 (54%), Gaps = 29/617 (4%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS- 78
S G + + L + LCA Q + +++H++ L+T I + P + L+ +YS
Sbjct: 2 SCGTRRYEGLLELGFADQRMGLCAPQ----EVEQLHAFSLKTAIFNHPFVSSRLLALYSD 57
Query: 79 -KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
K + YA +F+ + ++ +N +I + N F+ G+ F+ + LPD +T
Sbjct: 58 PKINDLGYARSIFDRIQ-RRSLIHWNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTL 115
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
PC+IK C + V E K+IHGL K+G DV++ +LVN Y KC ++ A KVF+ +
Sbjct: 116 PCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMID 175
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
+DVVLWN++++GYA+ GE AL++F M + F+ T ++ L G ++ R +
Sbjct: 176 KDVVLWNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDGLSKCGKVESARKL 231
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
+ S NA+I+ Y K ALE+F M D+ +WN ++ +E G
Sbjct: 232 FDQMPCRNLVS----WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQF 287
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+++F ML G +P T +VL A S LA L GR IH Y+ NG +G
Sbjct: 288 MDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDG------ 341
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ +L++MY KCG + A VF + KK V W +I+G G+ G AL +F MC
Sbjct: 342 --ILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMC 399
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ LKP+ + F+GVL+AC+H+G + GR++ +M + Y + PT+EHY C++D+L RAG L
Sbjct: 400 KTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHL 459
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA MP N V+W +LL SR HG D+ E AAQRV ++ P G Y+L+SN+Y
Sbjct: 460 EEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMY 519
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
A G +E+V +R M ++ RK+PGCS +E K LH FI D SHP+ K IYA++ +
Sbjct: 520 AASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMK 579
Query: 618 ARLREHGDCCAGTLFDS 634
+L+ C G + D+
Sbjct: 580 EKLK-----CVGHVPDT 591
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/574 (36%), Positives = 335/574 (58%), Gaps = 12/574 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + + G ++H ++ +G+ D SI SL++MYSKC + A+ +F +S
Sbjct: 242 LSVCASKLLIDLGVQLHGLVVVSGL-DFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS-RA 299
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+N MISG+ + + L FF M GVLPD TF L+ + ++IH
Sbjct: 300 DTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIH 359
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ + + LD+++ SAL++ Y KC+ + A K+F + DVV++ AM++GY G
Sbjct: 360 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNI 419
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
ALE+FR + K I + T+ +L + + K GR +HG ++K G+D+ + A+I
Sbjct: 420 DALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVI 479
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A EIF + ++DI SWNS++T Q N + +F +M +G D V
Sbjct: 480 DMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCV 539
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L + G+ IHG+++ + LA DV+ + L+DMY KCG+++
Sbjct: 540 SISAALSACANLPSESFGKAIHGFMIKHSLAL--------DVYSESTLIDMYAKCGNLKA 591
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACS 456
A VF M +K++ SWN +I YG G+ K++L +F M E + +PD++TF+ ++S C
Sbjct: 592 AMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCC 651
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G F M YG+ P EHY CV+D+ GRAG+L+EAYE +MP + VW
Sbjct: 652 HVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVW 711
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL ASRLH N +LA++A+ R+ L+P + G YVL+SN + G++E V +R M+++
Sbjct: 712 GTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKER 771
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
V+K PG SWIE+ H F+S D +HPE+ IY
Sbjct: 772 EVQKIPGYSWIEINKITHLFVSGDVNHPESSHIY 805
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/484 (29%), Positives = 250/484 (51%), Gaps = 11/484 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-P 97
LQ C++ T L++G+++H++++ I + ++ MY+ C +F L
Sbjct: 38 LQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLS 97
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ +N++IS F + L F+ M GV PD TFPCL+K C + ++ +
Sbjct: 98 SIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLS 157
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V LG+D + ++ S+L+ YL+ ++ A K+F+ + +D V+WN M+NGYA+ G
Sbjct: 158 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASD 217
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ F M + I + T VLS G +HG+VV G D + N+L+
Sbjct: 218 SVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLL 277
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K +A+++F MM D +WN +++ + Q G + +L F M+S+G PD +
Sbjct: 278 SMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAI 337
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TFS++LP+ S L + RQIH YI+ + ++ D+F+ +AL+D Y KC +
Sbjct: 338 TFSSLLPSVSKFENLEYCRQIHCYIMRHSISL--------DIFLTSALIDAYFKCRGVSM 389
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ +F++ + DV + MI GY +G +AL+MF + + K+ P+E+T V +L
Sbjct: 390 AQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGG 449
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L GRE + + G VIDM + G++N AYE+ ++ + V W
Sbjct: 450 LLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEI-FGRLSKRDIVSWN 507
Query: 518 TLLA 521
+++
Sbjct: 508 SMIT 511
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 164/343 (47%), Gaps = 13/343 (3%)
Query: 117 KGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
K L N R L LP + + L++ C ++ + + K++H V + D Y +
Sbjct: 15 KSLPLRNSYRFLEETLPRRLSL--LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERI 72
Query: 176 VNTYLKCQFMEEALKVFEELPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+ Y C K+F L R + WN++++ + ++G ++AL + +M G+
Sbjct: 73 LGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSP 132
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T ++ A + + FK + V +G D V ++LI Y + + A ++F
Sbjct: 133 DVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLF 192
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + +KD WN ++ + +CG D ++ F M P+ VTF VL C+ +
Sbjct: 193 DRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLID 252
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG +VV+GL GS K N+L+ MY+KCG DA +F MS+ D +W
Sbjct: 253 LGVQLHGLVVVSGLDFEGSIK--------NSLLSMYSKCGRFDDAIKLFRMMSRADTVTW 304
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
N MI GY G +E+L F M + + PD +TF +L + S
Sbjct: 305 NCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVS 347
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L + L+ G+E+H ++++ G + ++I+MY+KC +M A +F L
Sbjct: 439 TLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRL 498
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + ++ ++N+MI+ +D +D F M G+ D + + C ++ +
Sbjct: 499 S-KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFG 557
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IHG + K L LDVY S L++ Y KC ++ A+ VF+ + +++V WN+++ Y
Sbjct: 558 KAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNH 617
Query: 214 GEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVP 271
G+ +L +F M K G + T ++S +G G R + G
Sbjct: 618 GKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQE 677
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D++G+ + EA E + M D W +++
Sbjct: 678 HYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLL 715
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 8/203 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F + A+L CA+ + G+ IH +M++ + S ++LI+MY+KC +K A+ V
Sbjct: 536 FDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNV 595
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVM 148
F+ + E N+ ++N++I+ + ++ L F+ M + G PD+ TF +I CC V
Sbjct: 596 FDTMK-EKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVG 654
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAM 206
V E V+ + G+ + +V+ + + + EA + + +P D +W +
Sbjct: 655 DVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTL 714
Query: 207 VNGYAQIGEFHKALEVFRRMSKE 229
+ HK +E+ + S
Sbjct: 715 LGA----SRLHKNVELAKVASSR 733
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 342/612 (55%), Gaps = 34/612 (5%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
N TF PF L C A L +L+ + +H + R G+ T+L+++Y+KC
Sbjct: 129 NYTF--PFVLKACSALL-------DLRSARAVHCHAARAGLHADLFVSTALVDVYAKCAS 179
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGF-----YSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
++A VF + +V +NAM++G+ YS+ A L +H P+ T
Sbjct: 180 FRHAATVFRRMPAR-DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHA------PNASTL 232
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----VYIGSALVNTYLKCQFMEEALKVFE 193
L+ A+ + + +H + D V +G+AL++ Y KC + A +VFE
Sbjct: 233 VALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFE 292
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSALIMMGFFK 252
+ +R+ V W+A+V G+ G +A +F+ M +G+ ++S +V L A +
Sbjct: 293 AMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLC 352
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ +H ++ K G + + N+L+ MY K + +A +F+ M KD S++++++ +
Sbjct: 353 LGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYV 412
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
Q G D R+F +M + QPD+ T +++PACSHLAAL HG+ HG ++V G+A S
Sbjct: 413 QNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETS 472
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+ NAL+DMY KCG + ++ +F M +D+ SWN MI GYG+ G GKEA +
Sbjct: 473 --------ICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATAL 524
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M +PD+VTF+ ++SACSHSG +++G+ + +M +YG+ P +EHY ++D+L
Sbjct: 525 FLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLA 584
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
R G L+EAY+ MP +A+ VW LL A R+H N DL + + + QL P GN+VL
Sbjct: 585 RGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVL 644
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNI+ A G+++E ++R ++Q +K+PGCSWIE+ LH FI DRSH ++ IY E
Sbjct: 645 LSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQE 704
Query: 613 LHSLTARLREHG 624
L ++ + + G
Sbjct: 705 LDNILVDINKLG 716
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 217/455 (47%), Gaps = 21/455 (4%)
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C + A +F+ + P + YNA+I + A + + R+ P+ YTFP
Sbjct: 76 CGDLSLARHLFDQIP-APGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
++K C ++ + + +H + GL D+++ +ALV+ Y KC A VF +P RD
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV WNAM+ GYA G++ + M + + T+ +L L G GR VH
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNAS-TLVALLPLLAQHGALSQGRAVHA 253
Query: 260 IVVKM----GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
V+ + GV V AL+DMY K + A +FE M ++ +W++++ CG
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313
Query: 316 NHDGTLRLFDRMLSAG---FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
LF ML+ G P + ++ L AC++L+ L G+Q+H + +GL
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSP--TSVASALRACANLSDLCLGKQLHALLAKSGLHT--- 368
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D+ N+L+ MY K G + A +F +M KD S++ ++ GY +G+ EA +
Sbjct: 369 -----DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRV 423
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M ++PD T V ++ ACSH L G+ + R G+ +IDM
Sbjct: 424 FRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVR-GIASETSICNALIDMYA 482
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G+++ + ++ MP + V W T++A +HG
Sbjct: 483 KCGRIDLSRQIFDVMPAR-DIVSWNTMIAGYGIHG 516
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/613 (34%), Positives = 337/613 (54%), Gaps = 15/613 (2%)
Query: 22 GNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--TSLINMYSK 79
G Q+ P T +A LQ+CA L G+E+H+ +L+ G S L+I +L+ MY+K
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG---SELNIQCNALLVMYAK 313
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
++ AL VF ++ E + ++N+M+S + N F + +DFF M Q G PD
Sbjct: 314 YGRVDSALRVFGQIA-EKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L + + ++ H K L D+ +G+ L++ Y+KC +E + KVFE + +RD
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD 432
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+ W ++ +AQ +ALE+ + KEGI + + +L + + VH
Sbjct: 433 HISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC 492
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
++ G + + N LID+YG+ +L +F+ +E+KDI SW S++ G +G
Sbjct: 493 YAIRNGLLDLI-LENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNG 551
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ LF M A QPD V ++L A + L++L G+Q+HG+++ G
Sbjct: 552 AVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP------- 604
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ ++L+DMY+ CGSM A VF + KDV W MI GM G GK+A+D+F M +
Sbjct: 605 -VVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQT 663
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
L PD V+F+ +L ACSHS + +G+ +L +M S+Y + P EHY CV+D+LGR+GQ E
Sbjct: 664 GLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEE 723
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AYE MP + VW LL A R+H N LA +AA ++ +LEP + GNY+L+SN++
Sbjct: 724 AYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAE 783
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
GK+ + R M ++ +RKNP CSWIE+ + +HTF S D H ++++I+ +L +T
Sbjct: 784 MGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEM 843
Query: 620 LREHGDCCAGTLF 632
LR G T F
Sbjct: 844 LRREGGYVEDTRF 856
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 210/425 (49%), Gaps = 18/425 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGII---DSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
L L A + +G+++H++ + TG + D T L+ MY +C ++ A +FN +
Sbjct: 64 LDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPA 123
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL---GVLPDKYTFPCLIKCCCDVMAVLE 152
VF++NA++ + S+ A + + + MR G PD T ++K C
Sbjct: 124 R-TVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRC 182
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP--LRDVVLWNAMVNGY 210
++HGL K+GLD + +AL+ Y KC ++ AL+VFE L RDV WN++V+G
Sbjct: 183 GGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G +AL +FR M G M+ +T VL +G GR +H ++K G + +
Sbjct: 243 VQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI 302
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
NAL+ MY K V AL +F + EKD SWNS+++ + Q + + F ML
Sbjct: 303 QC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQH 361
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GFQPD ++ A HL+ L +GR+ H Y + L D+ + N LMDMY
Sbjct: 362 GFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHT--------DLQVGNTLMDMYI 413
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ + VF M +D SW ++ + + EAL+M + + + D +
Sbjct: 414 KCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGS 473
Query: 451 VLSAC 455
+L C
Sbjct: 474 ILETC 478
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/551 (25%), Positives = 265/551 (48%), Gaps = 24/551 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L+ C + + + G E+H ++ G+ S L +LI MY+KC + AL VF L
Sbjct: 166 TLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWL 225
Query: 94 SCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V ++N+++SG N + L F M+ G + YT +++ C ++ +
Sbjct: 226 QQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSL 285
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H + K G +L++ + LV Y K ++ AL+VF ++ +D + WN+M++ Y Q
Sbjct: 286 GRELHAALLKCGSELNIQCNALLV-MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQ 344
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ +A++ F M + G V + SAL + NGR H +K + + V
Sbjct: 345 NSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQV 404
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+DMY K + + ++FE M +D SW +I+ Q H L + + G
Sbjct: 405 GNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGI 464
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D + ++L C L ++ +Q+H Y + NGL D+ + N L+D+Y +C
Sbjct: 465 MVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLL---------DLILENRLIDIYGEC 515
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + +F ++ KKD+ SW MI +G+ A+ +F+ M +A ++PD V V +L
Sbjct: 516 GEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSIL 575
Query: 453 SACSHSGFLSQGREFLPLMESRYGVV--PTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
A + L++G++ + R + P + + ++DM G +N A +
Sbjct: 576 VAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV---SSLVDMYSGCGSMNYAIRV-FERAKC 631
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLM-----SNIYVAGGKY 563
+ V+W ++ A+ +HG+ A +R+ Q L P H L+ S + G Y
Sbjct: 632 KDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHY 691
Query: 564 EEVLDIRHTMR 574
+++ ++ ++
Sbjct: 692 LDIMVSKYRLK 702
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 10/216 (4%)
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+G LR R L+ P + VL + A GRQ+H + V GS + D
Sbjct: 39 EGDLRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVT-----TGSLNEDD 93
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D F+ L+ MY +CG + DA+ +F M + V SWN ++ Y G EA+ ++ M
Sbjct: 94 DGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMR 153
Query: 438 EAKL---KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
+ PD T VL AC G G E L + G+ + +I M +
Sbjct: 154 ASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGL-AVKVGLDKSTLVANALIGMYAKC 212
Query: 495 GQLNEAYELALAMPNEANPVV-WRTLLAASRLHGNT 529
G L+ A + + +A V W ++++ +G T
Sbjct: 213 GLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 321/581 (55%), Gaps = 41/581 (7%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+YS + +L +FN + P + ++I + S+ + L F M G+ PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPP-ALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHN 107
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA------- 188
FP ++K C +M + + +HG + ++GLD D+Y G+AL+N Y K +F+EE+
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167
Query: 189 -------------------------LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
K+FE +P +D+V WN ++ G A+ G + + L +
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R M + FT++ VL + G+ +HG ++ G D+ + V ++LIDMY K
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V ++ +F ++ E+D SWNSI+ Q G D LR F +ML A +P +FS+++
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
PAC+HL L G+Q+HGYI NG +N +F+ ++L+DMY KCG++R A+ +F
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDEN--------IFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M +D+ SW MI+G + GQ +A+++F M +KP+ V F+ VL+ACSH G + +
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDE 459
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++ M +G+ P +EHY V D+LGRAG+L EAY+ M +W TLL+A
Sbjct: 460 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC 519
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R+H N D+AE A R+ +++P + G Y+L++NIY A +++E R +MR+ +RK P
Sbjct: 520 RVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPA 579
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSWIE+K+ ++ F++ D SHP + I + L + + G
Sbjct: 580 CSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEG 620
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L L A ++ +G+EIH +R G+ +SLI+MY+KC ++ + V
Sbjct: 240 FTLSSV---LPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L+ E + ++N++I+G N +GL FF M + P Y+F ++ C +
Sbjct: 297 FTLLT-ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTT 355
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + G D +++I S+LV+ Y KC + A ++F+ + LRD+V W AM+ G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
A G+ A+E+F +M EGI + VL+A G + + + G
Sbjct: 416 CALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 475
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDRM 327
GV A+ D+ G+ + EA + M S W ++++ N D ++ +R+
Sbjct: 476 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRI 535
Query: 328 L 328
L
Sbjct: 536 L 536
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/578 (36%), Positives = 326/578 (56%), Gaps = 19/578 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQM-----KYALFVFNNLSCEPNVFTYNAMI 106
+ IH+ +LR + D + +LI CC + Y+ VF+ + EPN+F +N MI
Sbjct: 33 KHIHARLLRLHL-DQDNYLLNLI----LCCALDFGSTNYSKLVFSQVK-EPNIFLWNTMI 86
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
G S D + + MR G LP+ +T P ++K C + V KIH L+ K G D
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV++ ++L++ Y+KC ++ALKVF+++P ++VV W A++ GY G F +A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G+ F++ VL+A +G +G + + G V V +L+DMY K +
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A IF M EKDI SW++++ + G L LF +M S +PD T VL AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L AL G + N N + AL+DMY+KCGS+ A +FT M
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNP--------VLGTALIDMYSKCGSVTQAWEIFTAMK 378
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
KKD WN M++G M+G K +FS + + ++PDE TF+G+L C+H GF+++GR+
Sbjct: 379 KKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQ 438
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
F M+ + + P+IEHY C++D+LGRAG LNEA++L MP + N VVW LL +LH
Sbjct: 439 FFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
+T LAE +++ +LEP + GNYV +SNIY ++EE IR TM++Q ++K CSW
Sbjct: 499 KDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSW 558
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ +H F+ D+SH ++ IYA+L L L+ G
Sbjct: 559 IEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 192/382 (50%), Gaps = 9/382 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA + +++ G +IHS +++ G TSL+++Y KC AL VF+++ + N
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKN 179
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A+I+G+ S+ + + F + ++G+ PD ++ ++ C + + I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G+ +V++ ++L++ Y+KC +E A +F +P +D+V W+ M+ GYA G +
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++F +M E + +T+ GVLSA +G G ++ + + S + ALID
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V +A EIF M++KD WN++M G+ LF + G +PD T
Sbjct: 360 MYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +L C+H + GRQ N + + S + + ++D+ + G + +A
Sbjct: 420 FIGLLCGCTHGGFVNEGRQF-----FNNMKRVFSLTPSIEHY--GCMVDLLGRAGLLNEA 472
Query: 399 QMVFTKMS-KKDVASWNIMILG 419
+ M K + W ++ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G S M R + +P+ T+LI+MYSKC + A +F +
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V +NAM+ G N A F+ + + G+ PD+ TF L+ C V E
Sbjct: 378 KKKDRV-VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEG 436
Query: 154 KKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
++ VF L ++ Y +V+ + + EA ++ +P++ + V+W A++ G
Sbjct: 437 RQFFNNMKRVFSLTPSIEHY--GCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMS 234
+ H A +V +++ + W S
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNS 519
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/628 (35%), Positives = 346/628 (55%), Gaps = 39/628 (6%)
Query: 28 HPFTLATCIASLQLCAH-QTNLQKGQEIHSYMLRTGIIDSP--LSITSLINMYSKCCQMK 84
HP + T ++ L C+H +L+ G+E H++ L+ G +D + +L++MY++ +
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217
Query: 85 YALFVFNNLSCEPN----VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
A +F ++ + V T+N M+S + + ++ M GV PD TF
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277
Query: 141 IKCCCDVMAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP--L 197
+ C + + +++H V K L + ++ SALV+ Y + + A +VF+ +P
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRV 256
R + LWNAMV GYAQ G +ALE+F RM E G+ S T+ GVL A F
Sbjct: 338 RQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEA 397
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VHG V+K G V NAL+D+Y + + A IF +E +D+ SWN+++T G+
Sbjct: 398 VHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGH 457
Query: 317 HDGTLRLFDRMLSAG------------------FQPDLVTFSTVLPACSHLAALMHGRQI 358
+L M G P+ VT T+LP C+ LAA G++I
Sbjct: 458 IHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEI 517
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
HGY + + L D+ + +AL+DMY KCG + ++ VF ++ K++V +WN++I+
Sbjct: 518 HGYAMRHALDS--------DIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIM 569
Query: 419 GYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
YGM G G EA+ +F M + + KP+EVTF+ L+ACSHSG + +G E M+ +GV
Sbjct: 570 AYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGV 629
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAM-PNEANPVVWRTLLAASRLHGNTDLAEIAA 536
PT + + C +D+LGRAG+L+EAY + +M P E W + L A RLH N L EIAA
Sbjct: 630 QPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAA 689
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+R+FQLEP +YVL+ NIY A G +E+ ++R+ MRQ+ V K PGCSWIEL +H F
Sbjct: 690 ERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRF 749
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
++ + +HPE+ ++A + +L R+R G
Sbjct: 750 MAGESAHPESTLVHAHMDALWERMRNQG 777
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 228/516 (44%), Gaps = 49/516 (9%)
Query: 52 QEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+ IH LR ++ +P +L+ Y++C + AL +FN + + T+N++I+
Sbjct: 79 RSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSR-DAVTFNSLIAAL 137
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLG-LDL 167
LD M G +T ++ C + L + ++ H K G LD
Sbjct: 138 CLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDG 197
Query: 168 DVYIG-SALVNTYLKCQFMEEALKVFEELPLRD-----VVLWNAMVNGYAQIGEFHKALE 221
D +AL++ Y + +++A +F + D VV WN MV+ Q G +A+E
Sbjct: 198 DERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIE 257
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP----VMNALI 277
V M G+ T L A + GR +H V+K DS + V +AL+
Sbjct: 258 VIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLK---DSDLAANSFVASALV 314
Query: 278 DMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQP 334
DMY + VG A +F+M+ + + WN+++ + Q G + L LF RM AG P
Sbjct: 315 DMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVP 374
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
T + VLPAC+ +HGY++ G+A D+ F+ NALMD+Y + G
Sbjct: 375 SETTIAGVLPACARSETFAGKEAVHGYVLKRGMA--------DNPFVQNALMDLYARLGD 426
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC----------------- 437
M A+ +F + +DV SWN +I G + G +A + M
Sbjct: 427 MEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGT 486
Query: 438 -EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E + P+ VT + +L C+ ++G+E + R+ + I + ++DM + G
Sbjct: 487 DEEPVVPNNVTLMTLLPGCAMLAAPAKGKE-IHGYAMRHALDSDIAVGSALVDMYAKCGC 545
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
L + + +P N + W L+ A +HG D A
Sbjct: 546 LALSRAVFDRLPKR-NVITWNVLIMAYGMHGLGDEA 580
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 196/410 (47%), Gaps = 24/410 (5%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL--DLDVYIGSALVNTYLKCQFMEEALK 190
D + P K + +++ V+ IHG + L + +AL+ Y +C + AL
Sbjct: 58 DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F +P RD V +N+++ + AL+ R M EG +S FT+ VL A +
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177
Query: 251 -FKNGRVVHGIVVKMGYDSGVP--VMNALIDMYGKGKCVGEALEIFEMMEEKD-----IF 302
+ GR H +K G+ G NAL+ MY + V +A +F ++ D +
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+WN+++++ Q G + + M++ G +PD +TF++ LPACS L L GR++H Y+
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297
Query: 363 VVNG-LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM--SKKDVASWNIMILG 419
+ + LA N F+ +AL+DMY + A+ VF + + + WN M+ G
Sbjct: 298 LKDSDLAANS--------FVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCG 349
Query: 420 YGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
Y G +EAL++F+ M EA + P E T GVL AC+ S + G+E + + G+
Sbjct: 350 YAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFA-GKEAVHGYVLKRGMA 408
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++D+ R G + EA A + V W TL+ + G+
Sbjct: 409 DNPFVQNALMDLYARLGDM-EAARWIFAAIEPRDVVSWNTLITGCVVQGH 457
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 318/545 (58%), Gaps = 17/545 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + +VF++N++I+ + + + L F+ MR+L + P + +FPC IK C ++
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+ H F G D+++ SAL+ Y C +E+A KVF+E+P R++V W +M+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 209 GYAQIGEFHKALEVFRRMSKE------GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
GY G A+ +F+ + E +++ + V+SA + +H V+
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210
Query: 263 KMGYDSGVPVMNALIDMYGKGK--CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
K G+D GV V N L+D Y KG V A +IF+ + +KD S+NSIM+V+ Q G +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 321 LRLFDRMLSAGFQP-DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+F R++ + +T STVL A SH AL G+ IH ++ GL DDV
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE--------DDV 322
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ +++DMY KCG + A++ F +M K+V SW MI GYGM G +AL++F M ++
Sbjct: 323 IVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P+ +TFV VL+ACSH+G G + M+ R+GV P +EHY C++D+LGRAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L M E + ++W +LLAA R+H N +LAEI+ R+F+L+P +CG Y+L+S+IY
Sbjct: 443 AYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYAD 502
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
G++++V +R TM+ + + K PG S +EL +H F+ D HP+ + IY L L +
Sbjct: 503 SGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 620 LREHG 624
L E G
Sbjct: 563 LLEAG 567
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 172/338 (50%), Gaps = 12/338 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+++ C+ ++ G++ H G ++LI MYS C +++ A VF+ + +
Sbjct: 82 AIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KR 140
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM------RQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+ ++ +MI G+ N A + F + + D +I C V A
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKG 200
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPLRDVVLWNAMVNG 209
+ IH V K G D V +G+ L++ Y K + A K+F+++ +D V +N++++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++A +VFRR+ KE + + T++ VL A+ G + G+ +H V++MG +
Sbjct: 261 YAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V ++IDMY K V A F+ M+ K++ SW +++ + G+ L LF M+
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+G +P+ +TF +VL ACSH A +H H + + G
Sbjct: 381 DSGVRPNYITFVSVLAACSH--AGLHDVGWHWFNAMKG 416
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 98/185 (52%), Gaps = 7/185 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TFN TL+T + ++ +H L+ G+ IH ++R G+ D + TS+I+MY KC +++
Sbjct: 284 TFN-CITLSTVLLAV---SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A F+ + NV ++ AMI+G+ + A K L+ F M GV P+ TF ++ C
Sbjct: 340 TARLAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 145 CDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVL 202
+ + + + + G++ + +V+ + F+++A + +++ + D ++
Sbjct: 399 SHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSII 458
Query: 203 WNAMV 207
W++++
Sbjct: 459 WSSLL 463
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/629 (35%), Positives = 343/629 (54%), Gaps = 39/629 (6%)
Query: 27 NHPFTLATCIASLQLCAH-QTNLQKGQEIHSYMLRTGIIDSP--LSITSLINMYSKCCQM 83
HP T T ++ L C+H +L+ G+E H++ L+ G +D + +L++MY++ +
Sbjct: 155 GHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLV 214
Query: 84 KYALFVFNNLSCEP----NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
A +F ++ V T+N M+S + + ++ M GV PD TF
Sbjct: 215 DDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFAS 274
Query: 140 LIKCCCDVMAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL- 197
+ C + + +++H V K L + ++ SALV+ Y + + A VF+ +P
Sbjct: 275 ALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAG 334
Query: 198 -RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGR 255
R + LWNAM+ GYAQ G ALE+F RM E G+ S T+ GVL + F
Sbjct: 335 ERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKE 394
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VHG VVK G V NAL+D+Y + + A IF +E +D+ SWN+++T G
Sbjct: 395 AVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQG 454
Query: 316 NHDGTLRLFDRMLSAG------------------FQPDLVTFSTVLPACSHLAALMHGRQ 357
+ +L M G P+ +T T+LP C+ LAA G++
Sbjct: 455 HIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKE 514
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
IHGY V + L DV + +AL+DMY KCG + ++ VF ++ +++V +WN++I
Sbjct: 515 IHGYAVRHALDS--------DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLI 566
Query: 418 LGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ YGM G G EA+ +F M + + KP+EVTF+ L+ACSHSG + +G E M+ +G
Sbjct: 567 MAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHG 626
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAM-PNEANPVVWRTLLAASRLHGNTDLAEIA 535
V PT + + C +D+LGRAG+L+EAY + +M P E W + L A RLH N L EIA
Sbjct: 627 VEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIA 686
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+R+F+LEP +YVL+ NIY A G +E+ ++R MRQ+ V K PGCSWIEL +H
Sbjct: 687 AERLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWIELDGVIHR 746
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHG 624
F++ + +HPE+ ++A + +L R+R+ G
Sbjct: 747 FMAGESAHPESTLVHAHMDALWERMRDQG 775
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 200/411 (48%), Gaps = 26/411 (6%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD---VYIGSALVNTYLKCQFMEEAL 189
D++ P K + ++ V+ IHG + L LD + +AL+ Y +C + AL
Sbjct: 56 DRFALPPAAKSAAALRSLTAVRSIHGAALRHDL-LDGPTPAVSNALLTAYARCGDLTAAL 114
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F+ +P RD V +N+++ + AL+ R M EG ++ FT+ VL A +
Sbjct: 115 ALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLA 174
Query: 250 F-FKNGRVVHGIVVKMGYDSGVP--VMNALIDMYGKGKCVGEALEIFEMMEEKD-----I 301
+ GR H +K G+ G NAL+ MY + V +A +F + D +
Sbjct: 175 EDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGV 234
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
+WN+++++ Q G + + M++ G +PD VTF++ LPACS L L GR++H Y
Sbjct: 235 VTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAY 294
Query: 362 IVVNG-LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF--TKMSKKDVASWNIMIL 418
++ + LA N F+ +AL+DMY + A++VF ++ + WN MI
Sbjct: 295 VLKDADLAANS--------FVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMIC 346
Query: 419 GYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY G ++AL++F+ M EA + P E T GVL +C+ S + G+E + + G+
Sbjct: 347 GYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFA-GKEAVHGYVVKRGM 405
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++D+ R G ++ A + A + V W TL+ + G+
Sbjct: 406 ADNPFVQNALMDLYARLGDMDAARWI-FATIEPRDVVSWNTLITGCVVQGH 455
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/581 (35%), Positives = 319/581 (54%), Gaps = 42/581 (7%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+++ +++H+ + +P L+ Y+ C + VF+ +S + NV YN
Sbjct: 30 QNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS-DRNVVFYN 88
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
MI + +N GL F M G PD YT+PC++K C + IHG V K+
Sbjct: 89 VMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKV 148
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
GLD ++++G+ L+ Y KC + EA +VF+E+ +DVV WN+MV GYA F ALE+
Sbjct: 149 GLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEIC 208
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R M G T+ ++ A+ + N L
Sbjct: 209 REMEDYGQKPDGCTMASLMPAV----------------------ANTSSENVLY------ 240
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+IF +E K++ SWN ++ V+ + + L+ +M +PD +TF++VL
Sbjct: 241 -----VEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
PAC L+AL+ GR+IH Y+ L N + + N+L+DMY +CG + DA+ VF
Sbjct: 296 PACGDLSALLLGRRIHEYVEKKKLCPN--------LLLENSLIDMYARCGCLDDAKRVFD 347
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M +DVASW +I YGM GQG A+ +F+ M + PD + FV +LSACSHSG L +
Sbjct: 348 RMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDE 407
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
GR + M Y + P IEHY C++D+LGRAG+++EAY + MP E N VW TLL++
Sbjct: 408 GRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSC 467
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R+ N D+ +AA + QL P G YVL+SNIY G+++EV +IR M+++ +RK PG
Sbjct: 468 RVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPG 527
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S +EL + +HTF++ D SHP++K IY EL L A+++E G
Sbjct: 528 ISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELG 568
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 181/432 (41%), Gaps = 62/432 (14%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ NL+ G IH +L+ G+ + LI MY KC + A VF+ + + +
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWK-D 184
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+M++G+ N L+ M G PD T L+
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLM----------------- 227
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
A+ NT + E K+F L ++++ WN M+ Y + +
Sbjct: 228 --------------PAVANTSSENVLYVE--KIFVNLERKNLISWNVMIRVYMKNSLPTQ 271
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A++++ +M K + T VL A + GR +H V K + + N+LID
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY + C+ +A +F+ M+ +D+ SW S+++ + G + LF ML++G PD +
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIA 391
Query: 339 FSTVLPACSHLAALMHGR--------------QIHGYI-VVNGLAKNGSCKDIDDVFMNN 383
F +L ACSH L GR +I Y +V+ L + G + ++
Sbjct: 392 FVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQM 451
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG-------------YGMDGQGKEAL 430
+ ++ + VFT M +A+ N++ L Y G+ KE
Sbjct: 452 PIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVT 511
Query: 431 DMFSCMCEAKLK 442
++ S M K++
Sbjct: 512 EIRSVMKRKKIR 523
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + L G+ IH Y+ + + + L SLI+MY++C + A VF+ +
Sbjct: 290 TFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRM 349
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+V ++ ++IS + + F M G PD F ++ C
Sbjct: 350 KFR-DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSAC 399
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/664 (31%), Positives = 362/664 (54%), Gaps = 52/664 (7%)
Query: 9 NPFSSCFNFST-SSGNQTFNHPFTLATCIASLQL-CAHQTNLQKGQEIHSYMLRTGIIDS 66
N F + F ++ + HP I SL L C H +L +G+++H+ ++ G+ +
Sbjct: 62 NAFKTFFQIQHHAASSHLLLHP------IGSLLLACTHFKSLSQGKQLHAQVISLGLDQN 115
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
P+ ++ L+N Y+ + A FV + S + +N +IS + N F + L + +M
Sbjct: 116 PILVSRLVNFYTNVNLLVDAQFVTES-SNTLDPLHWNLLISAYVRNGFFVEALCVYKNML 174
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ PD+YT+P ++K C + + ++H + ++ +++ +ALV+ Y + +E
Sbjct: 175 NKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLE 234
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG------IW-------- 232
A +F+ +P RD V WN +++ YA G + +A ++F M +EG IW
Sbjct: 235 IARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCL 294
Query: 233 -----------MSRFTVTGVLSALIM---------MGFFKNGRVVHGIVVKMGYDSGVPV 272
+S+ + L A+ M +G K G+ +HG V+ +D V
Sbjct: 295 HSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNV 354
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALI MY + + +G A +F EEK + +WN++++ + ++ LF ML G
Sbjct: 355 KNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGM 414
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD-VFMNNALMDMYTK 391
+P+ VT ++VLP C+ +A L HG++ H YI+ + K ++ + + NAL+DMY++
Sbjct: 415 EPNYVTIASVLPLCARIANLQHGKEFHCYIMKH--------KQFEEYLLLWNALVDMYSR 466
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + +A+ VF ++K+D ++ MILGYGM G+G+ L +F MC+ ++KPD VT V V
Sbjct: 467 SGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAV 526
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSHSG ++QG+ M +G+VP +EHY C+ D+ GRAG LN+A E MP +
Sbjct: 527 LTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKP 586
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+W TLL A R+HGNT++ E AA ++ +++P H G YVL++N+Y A G + ++ ++R
Sbjct: 587 TSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAAAGSWRKLAEVRT 646
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTL 631
MR VRK PGC+W+++ F+ D S+P A IY + L +++ G + L
Sbjct: 647 YMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLNELMKDAGYVRSEEL 706
Query: 632 FDSD 635
S+
Sbjct: 707 VSSE 710
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/596 (34%), Positives = 326/596 (54%), Gaps = 9/596 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ + CA L +++H++ ++ + T+++++Y+K + A F L
Sbjct: 257 SAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP-H 315
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV T NAM+ G + + F M + GV D + + C +V + ++
Sbjct: 316 HNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQV 375
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L K G D+DV + +A+++ Y KC+ + EA VF+E+ RD V WNA++ Q +
Sbjct: 376 HCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 435
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ M + G+ FT VL A + + G VVHG +K G V + +
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K + EA ++ + + +++ SWNSI++ + R F ML G +PD
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDH 555
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T++TVL C++LA + G+QIHG I+ + + D ++++ L+DMY KCG+M
Sbjct: 556 FTYATVLDTCANLATIELGKQIHGQIIKQEM--------LGDEYISSTLVDMYAKCGNMP 607
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D+ ++F K K D SWN MI GY + GQG EAL+MF M A + P+ TFV VL ACS
Sbjct: 608 DSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACS 667
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G L G ++ LM SRY +VP +EH+ C++D+LGR+ EA E +MP EA+ VVW
Sbjct: 668 HVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVW 727
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLL+ ++ + ++AE AA V +L+P Y+L+SN+Y GK+ +V R MRQ
Sbjct: 728 KTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQG 787
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
+RK PGCSWIE++ +H F+ D+ HP +K +Y L+SL ++ G A LF
Sbjct: 788 RLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPASALF 843
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 261/496 (52%), Gaps = 23/496 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G +IH+ ++TG+ + ++L++MY KC + AL F+ + E N
Sbjct: 158 LKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMG-ERN 216
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A I+G N+ +G++ F M++LG+ + + + C + + +++H
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP +V NAM+ G + G +
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+++F+ M++ G+ +++GV SA + + G VH + VK G+D V V NA++D
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+YGK K + EA +F+ ME++D SWN+I+ EQ ++ T+ + ML +G +PD T
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL AC+ L +L +G +HG + +GL D F+++ ++DMY KCG++ +A
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGL--------DAFVSSTVVDMYCKCGAITEA 508
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q + ++ +++ SWN +I G+ + Q +EA FS M + +KPD T+ VL C++
Sbjct: 509 QKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANL 568
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ G++ +G + E + ++DM + G + ++ L + +
Sbjct: 569 ATIELGKQI-------HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSL-LMFEKARKLD 620
Query: 513 PVVWRTLLAASRLHGN 528
V W ++ LHG
Sbjct: 621 FVSWNAMICGYALHGQ 636
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 140/568 (24%), Positives = 259/568 (45%), Gaps = 65/568 (11%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAH--QTNLQKGQEIHSYMLRTGIIDSP 67
P +C + TF+H + QLCA ++ L GQ H+ ML +G + +
Sbjct: 4 PPHACSAGAGFVATATFSHLY---------QLCASAGRSALTTGQAAHARMLVSGFMPTT 54
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLS------------------------------CEP 97
L+ MY++C +A VF+ + +P
Sbjct: 55 FVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDP 114
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++N +ISG+ + + M + GV D+ T L+K C + + +IH
Sbjct: 115 DVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIH 174
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L K GL+ DV GSALV+ Y KC+ +++AL+ F + R+ V W A + G Q ++
Sbjct: 175 ALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYT 234
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+ +E+F +M + G+ +S+ + M R +H +K + S V A++
Sbjct: 235 RGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIV 294
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D+Y K + +A F + ++ + N++M + G ++LF M +G D++
Sbjct: 295 DVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVI 354
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S V AC+ + G Q+H V +G D+ DV + NA++D+Y KC ++ +
Sbjct: 355 SLSGVFSACAEVKGYFQGLQVHCLAVKSGF-------DV-DVCVRNAILDLYGKCKALVE 406
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS- 456
A +VF +M ++D SWN +I + ++ + + M + ++PD+ T+ VL AC+
Sbjct: 407 AYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAG 466
Query: 457 ----HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
G + G+ ++S G+ + + V+DM + G + EA +L + +
Sbjct: 467 LQSLEYGLVVHGKA----IKSGLGLDAFVS--STVVDMYCKCGAITEAQKLHDRIGGQ-E 519
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVF 540
V W ++++ L ++ AQR F
Sbjct: 520 LVSWNSIISGFSLTKQSE----EAQRFF 543
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 326/578 (56%), Gaps = 19/578 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQM-----KYALFVFNNLSCEPNVFTYNAMI 106
+ IH+ +LR + D + +LI CC + Y+ VF+ + EPN+F +N MI
Sbjct: 33 KHIHARLLRLHL-DQDNYLLNLI----LCCALDFGSTNYSKLVFSQVK-EPNIFLWNTMI 86
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
G S D + + MR G LP+ +T P ++K C + V KIH L+ K G D
Sbjct: 87 RGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYD 146
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV++ ++L++ Y+KC ++ALKVF+++P ++VV W A++ GY G F +A+ F+++
Sbjct: 147 HDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKL 206
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G+ F++ VL+A +G +G + + G V V +L+DMY K +
Sbjct: 207 LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL 266
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A IF M EKDI SW++++ + G L LF +M S +PD T VL AC
Sbjct: 267 ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSAC 326
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L AL G + N N + AL+DMY+KCGS+ A +FT M
Sbjct: 327 ATLGALDLGIWASSLMDRNEFLSNP--------VLGTALIDMYSKCGSVTQAWEIFTAMK 378
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+KD WN M++G M+G K +FS + + ++PDE TF+G+L C+H GF+++GR+
Sbjct: 379 RKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQ 438
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
F M+ + + P+IEHY C++D+LGRAG LNEA++L MP + N VVW LL +LH
Sbjct: 439 FFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLH 498
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
+T LAE +++ +LEP + GNYV +SNIY ++EE IR TM++Q ++K CSW
Sbjct: 499 KDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSW 558
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ +H F+ D+SH ++ IYA+L L L+ G
Sbjct: 559 IEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVG 596
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 191/382 (50%), Gaps = 9/382 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA + +++ G +IHS +++ G TSL+++Y KC AL VF+++ + N
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIP-DKN 179
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A+I+G+ S+ + + F + ++G+ PD ++ ++ C + + I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G+ +V++ ++L++ Y+KC +E A +F +P +D+V W+ M+ GYA G +
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++F +M E + +T+ GVLSA +G G ++ + + S + ALID
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V +A EIF M+ KD WN++M G+ LF + G +PD T
Sbjct: 360 MYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENT 419
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +L C+H + GRQ N + + S + + ++D+ + G + +A
Sbjct: 420 FIGLLCGCTHGGFVNEGRQF-----FNNMKRVFSLTPSIEHY--GCMVDLLGRAGLLNEA 472
Query: 399 QMVFTKMS-KKDVASWNIMILG 419
+ M K + W ++ G
Sbjct: 473 HQLINNMPMKPNAVVWGALLGG 494
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G S M R + +P+ T+LI+MYSKC + A +F +
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V +NAM+ G N A F+ + + G+ PD+ TF L+ C V E
Sbjct: 378 KRKDRV-VWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEG 436
Query: 154 KKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
++ VF L ++ Y +V+ + + EA ++ +P++ + V+W A++ G
Sbjct: 437 RQFFNNMKRVFSLTPSIEHY--GCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMS 234
+ H A +V +++ + W S
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNS 519
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 330/593 (55%), Gaps = 12/593 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FTL T L+ CA+ NL++GQ IHS +++ G + L++MYSKC A+
Sbjct: 313 NEFTLTTV---LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAI 369
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + +P++ ++A+I+ + + + F+ MR LP++YT L+ +
Sbjct: 370 GVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + IH V+K G + DV + +ALV Y+K + + K++E + RD++ WNA +
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+G G + + L +F M +EG + +T +L + + GR VH ++K D
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V ALIDMY K + +A F + +D+F+W I+T + Q + L F +M
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +P+ T + L CS LA+L G+Q+H + +G + D+F+ +AL+D
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG--------HVSDMFVGSALVD 660
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG M +A+ +F + ++D +WN +I GY +GQG +AL F M + + PD VT
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F G+LSACSH G + +G+E M +G+ PT++H C++D+LGR G+ +E + M
Sbjct: 721 FTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
N ++W T+L AS++H N L E AA ++F+L+P +Y+L+SNI+ G++++V
Sbjct: 781 QLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVK 840
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+R M + V+K PGCSW+E +HTF+S D SHP+ + I+ +L L L
Sbjct: 841 RVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDREL 893
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 275/508 (54%), Gaps = 14/508 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FTLAT + + LC L G+++H+ + G++ ++L+++Y+KC +++ A
Sbjct: 212 NEFTLATGLKACSLC---MALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELAS 268
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F + E N T+N +++G+ L F M +L V +++T ++K C +
Sbjct: 269 KMFIGMP-EQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANS 327
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + + IH L+ K G + + +IG LV+ Y KC +A+ VF+ + D+V+W+A++
Sbjct: 328 KNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALI 387
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Q G+ +++++F M +++T+ +LSA G + G+ +H V K G++
Sbjct: 388 TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFE 447
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V V NAL+ MY K CV + +++E M ++D+ SWN+ ++ CG +D L +F M
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHM 507
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
L GF P++ TF ++L +CS L + +GRQ+H +I+ N L N F+ AL+D
Sbjct: 508 LEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN--------FVCTALID 559
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KC + DA + F ++S +D+ +W ++I Y QG++AL+ F M + +KP+E T
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
G LS CS L G++ L M + G V + + ++DM + G + EA L A+
Sbjct: 620 LAGCLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ + W T++ +G + A A
Sbjct: 679 IRR-DTIAWNTIICGYAQNGQGNKALTA 705
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 235/455 (51%), Gaps = 15/455 (3%)
Query: 8 INPFSSCFNFS-----TSSGNQT-FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
++ F FNF + GNQ ++ L + L+ CA + +L + IH +++
Sbjct: 82 VHNFPYRFNFEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKD 141
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
I SL+N+Y+KC YA V + + +V ++ A+I G + FA +
Sbjct: 142 VINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP-DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
F M+ G++P+++T +K C MA+ K++H FKLGL LD+++GSALV+ Y K
Sbjct: 201 FQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
C +E A K+F +P ++ V WN ++NGYAQ G+ L++F M + + + FT+T V
Sbjct: 261 CGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L K G+V+H +++K GY+ + L+DMY K +A+ +F+ +++ DI
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
W++++T +Q G + +++LF M P+ T ++L A ++ L +G+ IH
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ G DV ++NAL+ MY K G + D ++ M +D+ SWN + G
Sbjct: 441 VWKYGFET--------DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
G L +F M E P+ TF+ +L +CS
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 330/593 (55%), Gaps = 12/593 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FTL T L+ CA+ NL++GQ IHS +++ G + L++MYSKC A+
Sbjct: 313 NEFTLTTV---LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAI 369
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + +P++ ++A+I+ + + + F+ MR LP++YT L+ +
Sbjct: 370 GVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNT 428
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + IH V+K G + DV + +ALV Y+K + + K++E + RD++ WNA +
Sbjct: 429 GNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYL 488
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+G G + + L +F M +EG + +T +L + + GR VH ++K D
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V ALIDMY K + +A F + +D+F+W I+T + Q + L F +M
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +P+ T + L CS LA+L G+Q+H + +G + D+F+ +AL+D
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSG--------HVSDMFVGSALVD 660
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG M +A+ +F + ++D +WN +I GY +GQG +AL F M + + PD VT
Sbjct: 661 MYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVT 720
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F G+LSACSH G + +G+E M +G+ PT++H C++D+LGR G+ +E + M
Sbjct: 721 FTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKM 780
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
N ++W T+L AS++H N L E AA ++F+L+P +Y+L+SNI+ G++++V
Sbjct: 781 QLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVK 840
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+R M + V+K PGCSW+E +HTF+S D SHP+ + I+ +L L L
Sbjct: 841 RVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDREL 893
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 275/508 (54%), Gaps = 14/508 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FTLAT + + LC L G+++H+ + G++ ++L+++Y+KC +++ A
Sbjct: 212 NEFTLATGLKACSLC---MALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELAS 268
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F + E N T+N +++G+ L F M +L V +++T ++K C +
Sbjct: 269 KMFIGMP-EQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANS 327
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + + IH L+ K G + + +IG LV+ Y KC +A+ VF+ + D+V+W+A++
Sbjct: 328 KNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALI 387
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Q G+ +++++F M +++T+ +LSA G + G+ +H V K G++
Sbjct: 388 TCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFE 447
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V V NAL+ MY K CV + +++E M ++D+ SWN+ ++ CG +D L +F M
Sbjct: 448 TDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHM 507
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
L GF P++ TF ++L +CS L + +GRQ+H +I+ N L N F+ AL+D
Sbjct: 508 LEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNN--------FVCTALID 559
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KC + DA + F ++S +D+ +W ++I Y QG++AL+ F M + +KP+E T
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
G LS CS L G++ L M + G V + + ++DM + G + EA L A+
Sbjct: 620 LAGCLSGCSSLASLEGGQQ-LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL 678
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ + W T++ +G + A A
Sbjct: 679 IRR-DTIAWNTIICGYAQNGQGNKALTA 705
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 235/455 (51%), Gaps = 15/455 (3%)
Query: 8 INPFSSCFNFS-----TSSGNQT-FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
++ F FNF + GNQ ++ L + L+ CA + +L + IH +++
Sbjct: 82 VHNFPYRFNFEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKD 141
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
I SL+N+Y+KC YA V + + +V ++ A+I G + FA +
Sbjct: 142 VINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP-DRDVVSWTALIQGLVAEGFANDSIYL 200
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
F M+ G++P+++T +K C MA+ K++H FKLGL LD+++GSALV+ Y K
Sbjct: 201 FQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAK 260
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
C +E A K+F +P ++ V WN ++NGYAQ G+ L++F M + + + FT+T V
Sbjct: 261 CGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTV 320
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L K G+V+H +++K GY+ + L+DMY K +A+ +F+ +++ DI
Sbjct: 321 LKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDI 380
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
W++++T +Q G + +++LF M P+ T ++L A ++ L +G+ IH
Sbjct: 381 VVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHAC 440
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ G DV ++NAL+ MY K G + D ++ M +D+ SWN + G
Sbjct: 441 VWKYGFET--------DVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLH 492
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
G L +F M E P+ TF+ +L +CS
Sbjct: 493 DCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCS 527
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/638 (32%), Positives = 339/638 (53%), Gaps = 82/638 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS--- 94
LQLCA +L G+++HS + + +D L + L+++Y+ C +K VF+ +
Sbjct: 106 LQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGL-KLVSLYATCGDLKEGRRVFDTMEKKN 164
Query: 95 -----------------------------------------------CEPNVFTYNAMIS 107
C+ +V ++N+MIS
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ SN +GL+ + M LG+ D T ++ C + + K +H L K +
Sbjct: 225 GYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFER 284
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ + L++ Y KC ++ AL+VFE++ R+VV W +M+ GY + G A+ + ++M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQME 344
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
KEG+ + T +L A G NG+ VH + +S + V NAL+DMY K +
Sbjct: 345 KEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMD 404
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F M KDI SWN+++ +PD T + +LPAC+
Sbjct: 405 GANSVFSTMVVKDIISWNTMI---------------------GELKPDSRTMACILPACA 443
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L+AL G++IHGYI+ NG + D + NAL+D+Y KCG + A+++F +
Sbjct: 444 SLSALERGKEIHGYILRNGYS--------SDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ SW +MI GYGM G G EA+ F+ M +A ++PDEV+F+ +L ACSHSG L QG F
Sbjct: 496 KDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M++ + + P +EHY C++D+L R G L++AYE +P + +W LL R++
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYH 615
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+ +LAE A+RVF+LEP + G YVL++NIY K+EEV +R + ++ +RKNPGCSWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWI 675
Query: 588 ELKDGLHTFIS-SDRSHPEAKSIYAELHSLTARLREHG 624
E+K ++ F+S ++ SHP +K I + L + +++E G
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG 713
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 188/390 (48%), Gaps = 32/390 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT I+ L CA+ L G+ +HS +++ +L++MYSKC + AL VF
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV ++ +MI+G+ + + + M + GV D ++ C ++
Sbjct: 311 KMG-ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLD 369
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K +H + ++ ++++ +AL++ Y KC M+ A VF + ++D++ WN M
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTM----- 424
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
IGE SR T+ +L A + + G+ +HG +++ GY S
Sbjct: 425 -IGELKPD--------------SR-TMACILPACASLSALERGKEIHGYILRNGYSSDRH 468
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL+D+Y K +G A +F+M+ KD+ SW +++ + G + + F+ M AG
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAG 528
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM-DMYT 390
+PD V+F ++L ACSH L G + YI+ N +I+ + A M D+ +
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF-------NIEPKLEHYACMVDLLS 580
Query: 391 KCGSMRDA-QMVFTKMSKKDVASWNIMILG 419
+ G++ A + + T D W ++ G
Sbjct: 581 RTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 338/581 (58%), Gaps = 14/581 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KGQE+H+Y+ R+G++D+ +SI +L+NMY KC + A VF + + V ++N+MIS
Sbjct: 472 RKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTV-SWNSMIS 530
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N+ + + F+ M++ G++P ++ + C + + ++IHG FK GLDL
Sbjct: 531 GLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDL 590
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEVFRRM 226
DV + +AL+ Y + + E KVF ++P D V WN+ + A+ +AL+ F M
Sbjct: 591 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 650
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +R T +L+A+ G +H +++K + NAL+ YGK + +
Sbjct: 651 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQM 710
Query: 287 GEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ IF M E +D SWNS+++ + G + L M+ G + D TF+TVL A
Sbjct: 711 EDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSA 770
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ +A L G ++H V L DV + +AL+DMY KCG + A F M
Sbjct: 771 CASVATLERGMEVHACAVRACLE--------SDVVVGSALVDMYAKCGKIDYASRFFELM 822
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+++ SWN MI GY G G++AL +F+ M + PD VTFVGVLSACSH G + +G
Sbjct: 823 PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGY 882
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA-SR 524
+ M YG+ P IEH++C++D+LGRAG + + + MP + N ++WRT+L A R
Sbjct: 883 KHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCR 942
Query: 525 LHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+G NT+L + AA+ + +LEP + NYVL+SN++ AGG +E+V++ R MR+ V+K+ G
Sbjct: 943 ANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAG 1002
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSW+ +KDG+H F++ D++HPE + IY +L L ++R+ G
Sbjct: 1003 CSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAG 1043
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 245/528 (46%), Gaps = 28/528 (5%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
+N ++S + F + TF+H L + ++L +H + +TG D
Sbjct: 120 LNKYNSTYTFLR---HYTFSHS-QLQQLDSEFDRYKTSSSLYDANHLHLQLYKTGFTDDV 175
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+LIN+Y + + A +F+ + + N+ +++ +ISG+ N + F +
Sbjct: 176 FFCNTLINIYVRIGNLVSARKLFDEMP-QKNLVSWSCLISGYTQNRMPDEACSLFKGVIS 234
Query: 128 LGVLPDKYTFPCLIKCC--CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ-F 184
G+LP+ + ++ C C + +IH + KL D+ + + L++ Y C
Sbjct: 235 SGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGS 294
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM----SRFTVTG 240
+++A +VF+E+ R+ V WN++++ Y + G+ A ++F M EG+ + + +T+
Sbjct: 295 IDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCS 354
Query: 241 VLSA---LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+++A L G +++ I K G+ + V +AL++ + + + A IF+ M
Sbjct: 355 LVTAACSLADCGLVLLEQMLTRI-EKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMY 413
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRM---LSAGFQPDLVTFSTVLPACSHLAALMH 354
+++ + N +M + + ++F M + + +V ST +
Sbjct: 414 DRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRK 473
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+++H Y+ +GL + + NAL++MY KC ++ +A VF M KD SWN
Sbjct: 474 GQEVHAYLFRSGLVDA-------RISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWN 526
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G + + +EA+ F M + P + + LS+CS G+L+ GR+ + +
Sbjct: 527 SMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ-IHGEGFK 585
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G+ + ++ + +NE ++ MP E + V W + + A
Sbjct: 586 WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 42/240 (17%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT +++ CA L++G E+H+ +R + + ++L++MY+KC ++ YA
Sbjct: 762 FTFATVLSA---CASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRF 818
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + N++++N+MISG+ + K L F M+Q G PD TF ++ C V
Sbjct: 819 FELMPVR-NIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGL 877
Query: 150 VLE---------------------------------VKKIHGLVFKLGLDLDVYIGSALV 176
V E VKKI + + +D ++ I ++
Sbjct: 878 VDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 937
Query: 177 NTYLKC-----QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ + + A K+ EL ++ V + + N +A G + +E M K +
Sbjct: 938 GACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAV 997
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 326/586 (55%), Gaps = 12/586 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L +G+E+H +++R G + +LI MY KC +K A +F+ + +
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP-RRD 261
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ N +GL+ F MR L V PD T +I C + + IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V G +D+ + ++L YL EA K+F + +D+V W M++GY K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A++ +R M ++ + TV VLSA +G G +H + +K S V V N LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K KC+ +AL+IF + K++ SW SI+ + N +F R + QP+ +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIA-GLRLNNRCFEALIFLRQMKMTLQPNAIT 500
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L AC+ + ALM G++IH +++ G+ +DD F+ NAL+DMY +CG M A
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVG-------LDD-FLPNALLDMYVRCGRMNTA 552
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F KKDV SWNI++ GY GQG +++F M +++++PDE+TF+ +L CS S
Sbjct: 553 WSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ QG + ME YGV P ++HY CV+D+LGRAG+L EA++ MP +P VW
Sbjct: 612 QMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H DL E++AQ +F+L+ G Y+L+ N+Y GK+ EV +R M++ +
Sbjct: 671 LLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ GCSW+E+K +H F+S D+ HP+ K I L ++ E G
Sbjct: 731 TVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 247/470 (52%), Gaps = 18/470 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNN 92
+A ++LC + ++G +++S L + S L + + + M+ + + A +VF
Sbjct: 98 VALVRLCEWKRAQEEGSKVYSIALSSM---SSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVL 151
+S E N+F++N ++ G+ + + + ++ M +G V PD YTFPC+++ C + +
Sbjct: 155 MS-ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H V + G +LD+ + +AL+ Y+KC ++ A +F+ +P RD++ WNAM++GY
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G H+ LE+F M + T+T V+SA ++G + GR +H V+ G+ +
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N+L MY EA ++F ME KDI SW ++++ +E D + + M
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD +T + VL AC+ L L G ++H + L I V + N L++MY+K
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL--------ISYVIVANNLINMYSK 445
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C + A +F + +K+V SW +I G ++ + EAL +F + L+P+ +T
Sbjct: 446 CKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAA 504
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
L+AC+ G L G+E + R GV ++DM R G++N A+
Sbjct: 505 LAACARIGALMCGKEIHAHV-LRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 219/423 (51%), Gaps = 13/423 (3%)
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ G +N + + N M++L V D+ F L++ C A E K++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
L V +G+A + +++ + +A VF ++ R++ WN +V GYA+ G F +A+ ++ R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 226 M-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M G+ +T VL + G+ VH VV+ GY+ + V+NALI MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A +F+ M +DI SWN++++ + + G L LF M PDL+T ++V+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
AC L GR IH Y++ G A D+ + N+L MY GS R+A+ +F++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAV--------DISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M +KD+ SW MI GY + +A+D + M + +KPDE+T VLSAC+ G L G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 465 REFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
E L +++R ++ + +I+M + +++A ++ +P + N + W +++A
Sbjct: 418 VELHKLAIKAR--LISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGL 474
Query: 524 RLH 526
RL+
Sbjct: 475 RLN 477
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 193/394 (48%), Gaps = 27/394 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL + I++ +L + + G++IH+Y++ TG SL MY + A +F
Sbjct: 299 TLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + ++ ++ MISG+ N K +D + M Q V PD+ T ++ C + +
Sbjct: 356 SRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++H L K L V + + L+N Y KC+ +++AL +F +P ++V+ W +++ G
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDS 268
+AL +F R K + + T+T L+A +G G+ +H V++ +G D
Sbjct: 475 RLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+P NAL+DMY + + A F ++KD+ SWN ++T + + G + LFDRM+
Sbjct: 534 FLP--NALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 329 SAGFQPDLVTFSTVLPACSH----LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ +PD +TF ++L CS LM+ ++ Y V L K+ +C
Sbjct: 591 KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL-KHYAC----------- 638
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G +++A KM D A W ++
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 340/638 (53%), Gaps = 82/638 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS--- 94
LQLCA + G+++HS + + +D L + L++ Y+ C +K VF+ +
Sbjct: 106 LQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGL-KLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 95 -----------------------------------------------CEPNVFTYNAMIS 107
C+ +V ++N+MIS
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ SN +GL + M LG+ D T ++ C + + K +H L K +
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ + L++ Y KC ++ AL+VFE++ R+VV W +M+ GY + G A+++ ++M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
KEG+ + +T +L A G NG+ VH + +S + V NAL+DMY K +
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F M KDI SWN+++ G L+ PD T + VLPAC+
Sbjct: 405 AANSVFSTMVVKDIISWNTMI----------GELK-----------PDSRTMACVLPACA 443
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L+AL G++IHGYI+ NG + D + NAL+D+Y KCG + A+++F +
Sbjct: 444 SLSALERGKEIHGYILRNGYS--------SDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ SW +MI GYGM G G EA+ F+ M +A ++PDEV+F+ +L ACSHSG L QG F
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M++ + + P +EHY C++D+L R G L++AYE +P + +W LL R +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYH 615
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+ +LAE A+RVF+LEP + G YVL++NIY K+EEV +R + +Q +RKNPGCSWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675
Query: 588 ELKDGLHTFIS-SDRSHPEAKSIYAELHSLTARLREHG 624
E+K ++ F+S ++ SHP +K+I + L + +++E G
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 187/390 (47%), Gaps = 32/390 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT I+ L CA+ L G+ +HS +++ +L++MYSKC + AL VF
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV ++ +MI+G+ + + + M + GV D ++ C ++
Sbjct: 311 KMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLD 369
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K +H + ++ ++++ +AL++ Y KC ME A VF + ++D++ WN M
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM----- 424
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
IGE SR T+ VL A + + G+ +HG +++ GY S
Sbjct: 425 -IGELKPD--------------SR-TMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL+D+Y K +G A +F+M+ KD+ SW ++ + G + + F+ M AG
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM-DMYT 390
+PD V+F ++L ACSH L G + YI+ N +I+ + A M D+ +
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF-------NIEPKLEHYACMVDLLS 580
Query: 391 KCGSMRDA-QMVFTKMSKKDVASWNIMILG 419
+ G++ A + + T D W ++ G
Sbjct: 581 RTGNLSKAYEFMETLPIAPDATIWGALLCG 610
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 338/599 (56%), Gaps = 14/599 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS+ + T F L + + + C ++ G+++H++ L++ + +L+ M
Sbjct: 140 FSSMLRSGTAADQFALGSAV---RACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTM 196
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKY 135
YSK + +F + + ++ ++ ++I+GF F + L F M G P+++
Sbjct: 197 YSKNGLVDDGFMLFERIK-DKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEF 255
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
F + C V + ++IHGL K LD D+Y+G +L + Y +C+ ++ A F +
Sbjct: 256 HFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRI 315
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
D+V WN++VN Y+ G +AL +F M G+ TV G+L A + +GR
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
++H +VK+G D V V N+L+ MY + + A+++F ++++D+ +WNSI+T Q
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + L+LF + + D ++ + VL A + L +Q+H Y GL
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGL-------- 487
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFS 434
+DD ++N L+D Y KCGS+ DA +F M + +DV SW+ +I+GY G KEA D+FS
Sbjct: 488 VDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFS 547
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M ++P+ VTF+GVL+ACS GF+++G + +ME YG+VPT EH +C++D+L RA
Sbjct: 548 RMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARA 607
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L EA MP E + ++W+TLLAAS++H + ++ + AA+ + ++P H YVL+
Sbjct: 608 GKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLC 667
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
NIY A G + E ++ MR V+K+PG SW++LK L FI DRSHPE++ IYA L
Sbjct: 668 NIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAML 726
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 234/492 (47%), Gaps = 18/492 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYML--RTGIIDSPLSITS-----LINMYSKCCQMKYALFV 89
A + C+ +L +G+ +H +++ + D+ L+ + LI MY +C A V
Sbjct: 49 ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N ++ ++I+ N A L F+ M + G D++ ++ C ++
Sbjct: 109 FDEMPAR-NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V +++H K D+ + +ALV Y K +++ +FE + +D++ W +++ G
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227
Query: 210 YAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+AQ G +AL+VFR M EG + F A +G ++ G +HG+ +K D
Sbjct: 228 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V +L DMY + K + A F +E D+ SWNSI+ + G L LF M
Sbjct: 288 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 347
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+G +PD +T +L AC AL HGR IH Y+V GL DV + N+L+ M
Sbjct: 348 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDG--------DVSVCNSLLSM 399
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +C + A VF ++ +DV +WN ++ +E L +FS + +++ D ++
Sbjct: 400 YARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISL 459
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VLSA + G+ ++ + + G+V +ID + G L++A L M
Sbjct: 460 NNVLSASAELGYFEMVKQ-VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMG 518
Query: 509 NEANPVVWRTLL 520
N + W +L+
Sbjct: 519 NNRDVFSWSSLI 530
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 194/402 (48%), Gaps = 18/402 (4%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLG-------LDLDVYIGSALVNTYLKCQFMEEAL 189
+ L+ C + ++ + +++H + L + +G+ L+ Y +C + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+VF+E+P R+ V W +++ + Q G AL +F M + G +F + + A +G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
GR VH +K S + V NAL+ MY K V + +FE +++KD+ SW SI+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 310 VHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q G L++F M+ G P+ F + AC + + +G QIHG + L
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
+ D+++ +L DMY +C ++ A++ F ++ D+ SWN ++ Y ++G E
Sbjct: 287 R--------DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSE 338
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +FS M ++ L+PD +T G+L AC L GR + + G+ + ++
Sbjct: 339 ALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLL 397
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M R L+ A ++ + ++ + V W ++L A H + +
Sbjct: 398 SMYARCSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPE 438
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 343/586 (58%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + G+ IH+++L+TG+I +SL+NMY+KC Q A+ +F+ + +
Sbjct: 113 LKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFP-QRD 171
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +NA+IS ++ + A L F+ M++LG P+ TF ++ C ++ + K++H
Sbjct: 172 VGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHR 231
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + + LD ++ SALV+ Y KC +E A +VFE++P ++ + WNAM+ GY+ G+
Sbjct: 232 ELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRS 291
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+E+ RM+ EG + T+T ++ A ++G+ +HG +++ D + + +LID
Sbjct: 292 CIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID 351
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K V A IF + + ++ SWN +++ H GNH L ++D M +PD +T
Sbjct: 352 FYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALT 411
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS+ L ACS LAAL GR++H I+ + L N ++ M AL+DMY KCG + +A
Sbjct: 412 FSSTLSACSQLAALDKGRELHYCIINHKLEAN-------EIVM-GALLDMYAKCGDVDEA 463
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F ++ K+D+ SW MI YG GQ EAL +F M + ++ D VTF+ VLSACSH+
Sbjct: 464 RKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHA 523
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE-LALAMPNEANPVVWR 517
G + +G + M +Y + P IEHY+C+ID+LGRAG+L+EAYE L + ++ +
Sbjct: 524 GLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLS 583
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TL +A LH N L + + +++P Y+L+SN+Y + K++EV +R M++
Sbjct: 584 TLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELG 643
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++K+PGCSWIE+ +H F + D+S+P A +Y L+ L + ++
Sbjct: 644 LKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHMEKN 689
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 167/507 (32%), Positives = 274/507 (54%), Gaps = 23/507 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T +++L+ C L++G+ IH + G + + SLI Y C A VF
Sbjct: 4 VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63
Query: 93 LSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAV 150
C +V +NA++S Y+N+F F + L F+ + V PD YT+P ++K C + V
Sbjct: 64 NDCPLDVSLWNALLSA-YTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRV 122
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ ++IH + K GL DV++GS+L+N Y KC +A+K+F+E P RDV WNA+++ Y
Sbjct: 123 IYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCY 182
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ G+ AL+ F +M + G + T T V+S+ + + G+ VH +++
Sbjct: 183 FKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDA 242
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V++AL+DMYGK C+ A E+FE + K+ +WN+++T + G+ + L RM
Sbjct: 243 FVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDE 302
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P L+T ++++ A S L HG+ IHGYI+ N + D+ D+F++ +L+D Y
Sbjct: 303 GTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRI-------DV-DIFIDVSLIDFYF 354
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG + A+ +F +SK +V SWN+MI G+ M G +AL ++ M E +KPD +TF
Sbjct: 355 KCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSS 414
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVP-TIEHYTCV----IDMLGRAGQLNEAYELAL 505
LSACS L +GRE Y ++ +E V +DM + G ++EA +L
Sbjct: 415 TLSACSQLAALDKGREL------HYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFH 468
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLA 532
+P + V W +++ A HG A
Sbjct: 469 QLPKR-DLVSWTSMIFAYGSHGQASEA 494
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 14/300 (4%)
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
M T+ L K G+++H + G+ S + + +LI Y A +
Sbjct: 1 MDYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 293 FEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF-QPDLVTFSTVLPACSHLA 350
F+ + D+ WN++++ + L+LFD++ + +PD T+ VL AC L
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+++GR+IH +++ GL I DVF+ ++LM+MY KC DA +F + ++DV
Sbjct: 121 RVIYGRRIHNHLLKTGL--------IWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDV 172
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LP 469
WN +I Y DG+ + AL F M E +P+ VTF V+S+C+ L +G+E
Sbjct: 173 GCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRE 232
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
L+E R + + + ++DM G+ G L A E+ +P + N + W ++ L G++
Sbjct: 233 LIERRILLDAFV--LSALVDMYGKCGCLEMAKEVFEKIPRK-NAITWNAMITGYSLKGDS 289
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 2/269 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL T + + + L+ G+ IH Y+LR I SLI+ Y KC + A +F
Sbjct: 307 TLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIF 366
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+S + V ++N MISG + L +++M++ V PD TF + C + A+
Sbjct: 367 RTIS-KNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAAL 425
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ +++H + L+ + + AL++ Y KC ++EA K+F +LP RD+V W +M+ Y
Sbjct: 426 DKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAY 485
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYDSG 269
G+ +AL +F M K + T VLSA G G + + +VV+ G
Sbjct: 486 GSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPG 545
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ + LID+ G+ + EA EI + +E
Sbjct: 546 IEHYSCLIDLLGRAGRLHEAYEILQRSKE 574
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 355/597 (59%), Gaps = 18/597 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T++T IA+L A+Q + G +IH+ +++ G L SLI+M SK ++ A V
Sbjct: 204 YTVSTVIAAL---ANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+N+ + +V ++N+MI+G N + + FN+M+ G P TF +IK C +
Sbjct: 261 FDNMENKDSV-SWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVN 208
+ V+ +H K GL + + +AL+ KC+ +++A +F + ++ VV W AM++
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY Q G+ +A+ +F M +EG+ + FT + +L+ + F + +H V+K Y+
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT--VQHAVFISE--IHAEVIKTNYEK 435
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V AL+D + K + +A+++FE++E KD+ +W++++ + Q G + ++F ++
Sbjct: 436 SSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLT 495
Query: 329 SAGFQPDLVTFSTVLPACSH-LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +P+ TF +++ AC+ A++ G+Q H Y + L N C ++++L+
Sbjct: 496 REGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRL-NNALC-------VSSSLVT 547
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y K G++ A +F + ++D+ SWN MI GY GQ K+AL++F M + L+ D +T
Sbjct: 548 LYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAIT 607
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GV+SAC+H+G + +G+ + +M + + + PT+EHY+C+ID+ RAG L +A ++ M
Sbjct: 608 FIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGM 667
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P VWR +LAASR+H N +L ++AA+++ LEP H YVL+SNIY A G + E +
Sbjct: 668 PFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKV 727
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++R M ++ V+K PG SWIE+K+ ++F++ D SHP + IY++L L RLR+ G
Sbjct: 728 NVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVG 784
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 247/505 (48%), Gaps = 27/505 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ L +CA N G+++H ++ G++ SL++MY+K ++ VF+ +
Sbjct: 106 SCV--LSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM 163
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++N++++G+ N F + + F M+ G PD YT +I + AV
Sbjct: 164 G-DRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG 222
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+IH LV KLG + + + ++L++ K + +A VF+ + +D V WN+M+ G+
Sbjct: 223 MQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVIN 282
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ +A E F M G + T V+ + + RV+H +K G + V+
Sbjct: 283 GQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVL 342
Query: 274 NALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ K K + +A +F +M + + SW ++++ + Q G+ D + LF M G
Sbjct: 343 TALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ T+ST+L H + +IH ++ K+ S + AL+D + K
Sbjct: 403 KPNHFTYSTIL-TVQHAVFI---SEIHAEVIKTNYEKSSS--------VGTALLDAFVKI 450
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ DA VF + KDV +W+ M+ GY G+ +EA +F + +KP+E TF ++
Sbjct: 451 GNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSII 510
Query: 453 SACSH-SGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAM 507
+AC+ + + QG++F Y + + + CV + + + G + A+E+
Sbjct: 511 NACTAPTASVEQGKQF-----HAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEI-FKR 564
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
E + V W ++++ HG A
Sbjct: 565 QKERDLVSWNSMISGYAQHGQAKKA 589
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 217/432 (50%), Gaps = 15/432 (3%)
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N ++ + D + L F + + G+ PD YT C++ C +++H
Sbjct: 70 HNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCV 129
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K GL + +G++LV+ Y K + + +VF+E+ RDVV WN+++ GY+ + E
Sbjct: 130 KCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWE 189
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F M EG +TV+ V++AL G G +H +VVK+G+++ V N+LI M
Sbjct: 190 LFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLS 249
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + +A +F+ ME KD SWNS++ H G F+ M AG +P TF++
Sbjct: 250 KSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFAS 309
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
V+ +C+ L L R +H + +GL+ N + + ALM TKC + DA +
Sbjct: 310 VIKSCASLKELGLVRVLHCKTLKSGLSTNQN--------VLTALMVALTKCKEIDDAFSL 361
Query: 402 FTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
F+ M + V SW MI GY +G +A+++FS M +KP+ T+ +L+ H+ F
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTV-QHAVF 420
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+S+ ++++ Y ++ T ++D + G +++A ++ + + + W +L
Sbjct: 421 ISEIHA--EVIKTNYEKSSSVG--TALLDAFVKIGNISDAVKV-FELIETKDVIAWSAML 475
Query: 521 AASRLHGNTDLA 532
A G T+ A
Sbjct: 476 AGYAQAGETEEA 487
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 211/407 (51%), Gaps = 21/407 (5%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F T + Q T AT + ++ CA L + +H L++G+ + +T+L+
Sbjct: 289 FETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVA 348
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
+KC ++ A +F+ + +V ++ AMISG+ N + ++ F+ MR+ GV P+ +T
Sbjct: 349 LTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFT 408
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+ ++ V + + +IH V K + +G+AL++ ++K + +A+KVFE +
Sbjct: 409 YSTILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE 464
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM-MGFFKNGR 255
+DV+ W+AM+ GYAQ GE +A ++F ++++EGI + FT +++A + G+
Sbjct: 465 TKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGK 524
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
H +K+ ++ + V ++L+ +Y K + A EIF+ +E+D+ SWNS+++ + Q G
Sbjct: 525 QFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHG 584
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV----VNGLAKNG 371
L +F+ M + D +TF V+ AC+H + G+ ++ +N ++
Sbjct: 585 QAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHY 644
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
SC ++D+Y++ G + A + M A+ W I++
Sbjct: 645 SC-----------MIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVL 680
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
R AQ +F + +D+ N ++ Y Q +EAL +F + + L PD T VLS C
Sbjct: 53 RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ S F E + + G+V + ++DM + G + + + M + + V
Sbjct: 113 AGS-FNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM-GDRDVVS 170
Query: 516 WRTLL 520
W +LL
Sbjct: 171 WNSLL 175
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 340/638 (53%), Gaps = 82/638 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS--- 94
LQLCA + G+++HS + + +D L + L++ Y+ C +K VF+ +
Sbjct: 106 LQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGL-KLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 95 -----------------------------------------------CEPNVFTYNAMIS 107
C+ +V ++N+MIS
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ SN +GL + M LG+ D T ++ C + + K +H L K +
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ + L++ Y KC ++ AL+VFE++ R+VV W +M+ GY + G A+++ ++M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
KEG+ + +T +L A G NG+ VH + +S + V NAL+DMY K +
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F M KDI SWN+++ G L+ PD T + VLPAC+
Sbjct: 405 AANSVFSTMVVKDIISWNTMI----------GELK-----------PDSRTMACVLPACA 443
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L+AL G++IHGYI+ NG + D + NAL+D+Y KCG + A+++F +
Sbjct: 444 SLSALERGKEIHGYILRNGYS--------SDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ SW +MI GYGM G G EA+ F+ M +A ++PDEV+F+ +L ACSHSG L QG F
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M++ + + P +EHY C++D+L R G L++AYE +P + +W LL R +
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYH 615
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+ +LAE A+RVF+LEP + G YVL++NIY K+EEV +R + +Q +RKNPGCSWI
Sbjct: 616 DIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675
Query: 588 ELKDGLHTFIS-SDRSHPEAKSIYAELHSLTARLREHG 624
E+K ++ F+S ++ SHP +K+I + L + +++E G
Sbjct: 676 EIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEG 713
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 187/390 (47%), Gaps = 32/390 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT I+ L CA+ L G+ +HS +++ +L++MYSKC + AL VF
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV ++ +MI+G+ + + + M + GV D ++ C ++
Sbjct: 311 KMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLD 369
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K +H + ++ ++++ +AL++ Y KC ME A VF + ++D++ WN M
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTM----- 424
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
IGE SR T+ VL A + + G+ +HG +++ GY S
Sbjct: 425 -IGELKPD--------------SR-TMACVLPACASLSALERGKEIHGYILRNGYSSDRH 468
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL+D+Y K +G A +F+M+ KD+ SW ++ + G + + F+ M AG
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM-DMYT 390
+PD V+F ++L ACSH L G + YI+ N +I+ + A M D+ +
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF-------NIEPKLEHYACMVDLLS 580
Query: 391 KCGSMRDA-QMVFTKMSKKDVASWNIMILG 419
+ G++ A + + T D W ++ G
Sbjct: 581 RTGNLSKAYEFIETLPIAPDATIWGALLCG 610
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 334/571 (58%), Gaps = 10/571 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH+ ++++G + + +SL+ MY+K + +L VF+ + E +V ++N +IS FY
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFY 184
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ A K L+ F M G P+ + I C ++ + K+IH K G +LD Y
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ SALV+ Y KC +E A +VF+++P + +V WN+M+ GY G+ +E+ RM EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S+ T+T +L A +G+ +HG V++ ++ + V +LID+Y K A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F ++ SWN +++ + GN + ++D+M+S G +PD+VTF++VLPACS LA
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH L+ + S + D++ + +AL+DMY+KCG+ ++A +F + KKDV
Sbjct: 425 ALEKGKQIH-------LSISESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW +MI YG GQ +EAL F M + LKPD VT + VLSAC H+G + +G +F
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA-NPVVWRTLLAASRLHGNT 529
M S+YG+ P IEHY+C+ID+LGRAG+L EAYE+ P + N + TL +A LH
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEH 596
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
L + A+ + + P Y+++ N+Y +G ++ +R M++ +RK PGCSWIE+
Sbjct: 597 SLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
D + F + DRSH A+++Y L L+ +
Sbjct: 657 SDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 271/514 (52%), Gaps = 22/514 (4%)
Query: 39 LQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C + T +L++ + +H +L G+ + SLIN+Y C A VF N
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 69
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V+ +N+++SG+ N L+ F + + +PD +TFP +IK + + I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H LV K G DV + S+LV Y K E +L+VF+E+P RDV WN +++ + Q GE
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
KALE+F RM G + ++T +SA + + + G+ +H VK G++ V +AL
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK C+ A E+F+ M K + +WNS++ + G+ + + +RM+ G +P
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI---VVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
T +++L ACS L+HG+ IHGY+ VVN D+++N +L+D+Y KCG
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA-----------DIYVNCSLIDLYFKCG 358
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
A+ VF+K K SWN+MI Y G +A++++ M +KPD VTF VL
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 454 ACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACS L +G++ L + ESR + + ++DM + G EA+ + ++P + +
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIPKK-D 475
Query: 513 PVVWRTLLAASRLHGNTD--LAEIAAQRVFQLEP 544
V W +++A HG L + + F L+P
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C+ L+KG++IH + + + L +++L++MYSKC K A +FN
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + +V ++ MIS + S+ + L F+ M++ G+ PD T ++ C +
Sbjct: 470 SIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 152 E-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
E +K + K G++ + S +++ + + EA ++ ++ P
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/588 (36%), Positives = 335/588 (56%), Gaps = 12/588 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC+ L+ A +++ + +H Y+L+ G + + SLI Y K ++ A +F+ L
Sbjct: 474 TCV--LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 531
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S EP+V ++N+MI+G N F+ GL+ F M LGV D T ++ ++ +
Sbjct: 532 S-EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +HG K +V + L++ Y KC + A +VF ++ +V W + + Y +
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + A+ +F M +G+ +TVT ++ A GR VH V+K G S +PV
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 710
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI+MY K V EA +F + KDI SWN+++ + Q + L LF M F+
Sbjct: 711 NALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFK 769
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T + VLPAC+ LAAL GR+IHG+I+ G D+ + AL+DMY KCG
Sbjct: 770 PDDITMACVLPACAGLAALDKGREIHGHILRRGY--------FSDLHVACALVDMYAKCG 821
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ AQ++F + KKD+ SW +MI GYGM G G EA+ F+ M A ++PDE +F +L+
Sbjct: 822 LLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG L++G +F M + GV P +EHY CV+D+L R G L++AY+ +MP + +
Sbjct: 882 ACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDT 941
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL+ R+H + LAE A+ +F+LEP + YV+++N+Y K+EEV +R M
Sbjct: 942 TIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRM 1001
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+++ ++NPGCSWIE+ + F++ + HP+AK I L LT +++
Sbjct: 1002 QKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQ 1049
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 282/541 (52%), Gaps = 17/541 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQLCA + +L+ G+ +HS ++ GI ID L L+ MY C + +F+ + +
Sbjct: 376 LQLCAEKKSLEDGKRVHSVIISNGISIDEALG-AKLVFMYVNCGDLVQGRKIFDKIMND- 433
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
VF +N ++S + + + F M++LGV+ + YTF C++KC + V E K++H
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V KLG + + ++L+ Y K +E A +F+EL DVV WN+M+NG G
Sbjct: 494 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F +M G+ + T+ VL A +G GR +HG VK + V N L+
Sbjct: 554 NGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 613
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A E+F M + I SW S + + + G + + LFD M S G +PD+
Sbjct: 614 DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T ++++ AC+ ++L GR +H Y++ NG+ N + + NAL++MY KCGS+ +
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSN--------LPVTNALINMYAKCGSVEE 725
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF+K+ KD+ SWN MI GY + EAL++F M + + KPD++T VL AC+
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +GRE + R G + ++DM + G L A +L M + + + W
Sbjct: 785 LAALDKGREIHGHILRR-GYFSDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWT 842
Query: 518 TLLAASRLH--GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
++A +H GN ++ R+ +EP V++ N G E ++MR
Sbjct: 843 VMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVIL-NACSHSGLLNEGWKFFNSMRN 901
Query: 576 Q 576
+
Sbjct: 902 E 902
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 203/383 (53%), Gaps = 10/383 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C + ++ + K++H ++ G+ +D +G+ LV Y+ C + + K+F+++
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V LWN +++ YA+IG F +++ +F++M K G+ + +T T VL +G K + VHG
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
V+K+G+ S V+N+LI Y K V A +F+ + E D+ SWNS++ G
Sbjct: 495 YVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGN 554
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L +F +ML G + DL T +VL A +++ L GR +HG+ V + ++V
Sbjct: 555 GLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFS--------EEV 606
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+N L+DMY+KCG++ A VF KM + SW I Y +G +A+ +F M
Sbjct: 607 VFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK 666
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++PD T ++ AC+ S L +GR+ + + G+ + +I+M + G + E
Sbjct: 667 GVRPDIYTVTSIVHACACSSSLDKGRDVHSYV-IKNGMGSNLPVTNALINMYAKCGSVEE 725
Query: 500 AYELALAMPNEANPVVWRTLLAA 522
A + +P + + V W T++
Sbjct: 726 ARLVFSKIPVK-DIVSWNTMIGG 747
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S ++ L ++ +VL C+ +L G+++H I+ NG++ ID+ + L+ M
Sbjct: 362 SKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGIS-------IDEA-LGAKLVFM 413
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y CG + + +F K+ V WN+++ Y G +E++ +F M + + + TF
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 449 VGVL 452
VL
Sbjct: 474 TCVL 477
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/631 (34%), Positives = 333/631 (52%), Gaps = 47/631 (7%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T+ +CI L C+ +L+ G+ IH + L+ G++++ +L+N+Y C ++ A
Sbjct: 242 PVTV-SCI--LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQA 298
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L NV T+N++ S + + F KGL+ F M GV PD ++ C +
Sbjct: 299 VFD-LMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLK 357
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K IHG K G+ DV++ +ALVN Y C + EA VF+ +P R+VV WN++ +
Sbjct: 358 DLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSS 417
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y G K L VFR M G+ T+ +L A + K+G+V+HG V+ G
Sbjct: 418 CYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE 477
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL------- 321
V V NAL+ +Y K CV EA +F+++ +++ SWN I+T + ++ L
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMN 537
Query: 322 ----------------------------RLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+F +M + GF+PD T ++L ACS L
Sbjct: 538 RDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLR 597
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G++IH Y+ + KD D + NAL+DMY KCG + ++ VF M KDV SW
Sbjct: 598 MGKEIHCYVFRHW-------KDWD-LARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSW 649
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI GM G GKEAL +F M + +KPD TF VLSACSHS + +G + M
Sbjct: 650 NTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSR 709
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ V P EHYTCV+D+ RAG L EAY MP E + W+ LA R++ N +LA+
Sbjct: 710 DHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAK 769
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
I+A+++F+++P NYV + NI V + E IR M+++ + K PGCSW + + +
Sbjct: 770 ISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRV 829
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
HTF++ D+S+ E+ IY L L A+++ G
Sbjct: 830 HTFVAGDKSNMESDKIYNFLDELFAKIKAAG 860
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 162/540 (30%), Positives = 279/540 (51%), Gaps = 47/540 (8%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
N+ +P T+++ + C+ +L+ G+EIH +++R G+++ ++ +N Y+KC
Sbjct: 135 NKVKANPLTVSSILPG---CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLC 191
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
++ A VF+ L +V T+N++ S + + F KGL+ F M GV PD T C++
Sbjct: 192 VREAQTVFD-LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILS 250
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C D+ + K IHG K G+ +V++ +ALVN Y C + EA VF+ +P R+V+
Sbjct: 251 ACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVIT 310
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN++ + Y G K L VFR M G+ ++ +L A + K+G+ +HG V
Sbjct: 311 WNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAV 370
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
K G V V AL+++Y CV EA +F++M +++ +WNS+ + + CG L
Sbjct: 371 KHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLN 430
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F M+ G +PDLVT ++L ACS L L G+ IHG+ V +G+ ++DVF+
Sbjct: 431 VFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGM--------VEDVFVC 482
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NAL+ +Y KC +R+AQ+VF + ++VASWN ++ Y + + ++ L MFS M ++K
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 443 PDEVTFVGVLSACSHSGFLSQGRE---------FLPLMESRYGVVPTIEHYTC------- 486
DE+T+ V+ C + + + E F P + Y ++ C
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 487 ------------------VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++DM + G L+ + + MP + + W T++ A+ +HGN
Sbjct: 603 HCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN 661
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 253/487 (51%), Gaps = 11/487 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A + CA + K ++ H R G++ + I+ Y KC ++ A VF++L
Sbjct: 44 MAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVA 103
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V T+N++ + + + F +GL+ F M V + T ++ C D+ + K+
Sbjct: 104 R-DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKE 162
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG V + G+ DV++ SA VN Y KC + EA VF+ +P RDVV WN++ + Y G
Sbjct: 163 IHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGF 222
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
K L VFR M +G+ TV+ +LSA + K+G+ +HG +K G V V NA
Sbjct: 223 PQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNA 282
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+++Y CV EA +F++M +++ +WNS+ + + CG L +F M G +PD
Sbjct: 283 LVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPD 342
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+ S++LPACS L L G+ IHG+ V +G+ ++DVF+ AL+++Y C +
Sbjct: 343 PMAMSSILPACSQLKDLKSGKTIHGFAVKHGM--------VEDVFVCTALVNLYANCLCV 394
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
R+AQ VF M ++V +WN + Y G ++ L++F M +KPD VT + +L AC
Sbjct: 395 REAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHAC 454
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S L G+ + R+G+V + ++ + + + EA + +P+
Sbjct: 455 SDLQDLKSGK-VIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR-EVAS 512
Query: 516 WRTLLAA 522
W +L A
Sbjct: 513 WNGILTA 519
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 212/403 (52%), Gaps = 10/403 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + + R G+ PDK F + K C L+VK+ H + G+ DV IG+A +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y KC+ +E A +VF++L RDVV WN++ Y G + L VFR+M + +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
TV+ +L + K+G+ +HG VV+ G V V +A ++ Y K CV EA +F++M
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D+ +WNS+ + + CG L +F M+ G +PD VT S +L ACS L L G+
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
IHG+ + +G+ +N VF++NAL+++Y C +R+AQ VF M ++V +WN +
Sbjct: 263 AIHGFALKHGMVEN--------VFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
Y G ++ L++F M +KPD + +L ACS L G+ + ++G
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKT-IHGFAVKHG 373
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+V + T ++++ + EA + MP+ N V W +L
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 339/603 (56%), Gaps = 12/603 (1%)
Query: 22 GNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC 81
N + TLA ++ ++ +++ G++ HS ++TG +SL+NMY K
Sbjct: 111 ANNVIPNAHTLAGVFSA---ASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTG 167
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
+ A +F+ + E N ++ MISG+ S+D A K ++ F MR+ + +++ ++
Sbjct: 168 FVFDARKLFDRMP-ERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVL 226
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
+ V +++H L K GL V + +ALV Y KC +++A++ FE ++ +
Sbjct: 227 SALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSI 286
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W+AMV GYAQ G+ KAL++F +M G+ S FT+ GV++A + G+ +H
Sbjct: 287 TWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFA 346
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
K+G+ + V++A++DMY K + +A + FE +++ D+ W SI+T + Q G+++G L
Sbjct: 347 FKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGL 406
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
L+ +M P+ +T ++VL ACS LAAL G+Q+H I+ G +V +
Sbjct: 407 NLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKL--------EVPI 458
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL MYTKCGS+ D ++F +M +DV SWN MI G +G G +AL++F M +
Sbjct: 459 GSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGI 518
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KPD VTFV +LSACSH G + +G E+ +M + + P +EHY C++D+L RAG+LNEA
Sbjct: 519 KPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAK 578
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
E + + +WR LL A + H N +L A +++ +L YVL+S+IY A G
Sbjct: 579 EFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALG 638
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
E V +R M+ + V K PGCSWIELK +H F+ D HP+ I EL LT +
Sbjct: 639 DRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMI 698
Query: 622 EHG 624
+ G
Sbjct: 699 DEG 701
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/497 (30%), Positives = 267/497 (53%), Gaps = 17/497 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEPNVF 100
C H N+ KG+ +H+ +L+TG I S + +N+Y+K + +AL +F++++ + +
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 101 TYNAMISGFYSN----DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
++N++I+ F N +F F MR V+P+ +T + ++ V+ K+
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + K G DVY+GS+L+N Y K F+ +A K+F+ +P R+ V W M++GYA
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
KA+EVF M +E + F +T VLSAL F GR VH + +K G + V V NAL
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY K + +A+ FE +K+ +W++++T + Q G+ D L+LF++M S+G P
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T V+ ACS L A++ G+Q+H + G +++ +A++DMY KCGS+
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQ--------LYVLSAVVDMYAKCGSLA 372
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA+ F + + DV W +I GY +G + L+++ M ++ P+E+T VL ACS
Sbjct: 373 DARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACS 432
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L QG++ + +YG + + + M + G L++ Y + MP+ + + W
Sbjct: 433 SLAALDQGKQMHARI-IKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVISW 490
Query: 517 RTLLA--ASRLHGNTDL 531
+++ + HGN L
Sbjct: 491 NAMISGLSQNGHGNKAL 507
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 338/599 (56%), Gaps = 14/599 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS+ + T F L + + + C ++ G+++H++ L++ + +L+ M
Sbjct: 123 FSSMLRSGTAADQFALGSAV---RACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTM 179
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKY 135
YSK + +F + + ++ ++ ++I+GF F + L F M G P+++
Sbjct: 180 YSKNGLVDDGFMLFERIK-DKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEF 238
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
F + C V + ++IHGL K LD D+Y+G +L + Y +C+ ++ A F +
Sbjct: 239 HFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRI 298
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
D+V WN++VN Y+ G +AL +F M G+ TV G+L A + +GR
Sbjct: 299 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 358
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
++H +VK+G D V V N+L+ MY + + A+++F ++++D+ +WNSI+T Q
Sbjct: 359 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 418
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + L+LF + + D ++ + VL A + L +Q+H Y GL
Sbjct: 419 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGL-------- 470
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFS 434
+DD ++N L+D Y KCGS+ DA +F M + +DV SW+ +I+GY G KEA D+FS
Sbjct: 471 VDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFS 530
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M ++P+ VTF+GVL+ACS GF+++G + +ME YG+VPT EH +C++D+L RA
Sbjct: 531 RMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARA 590
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L EA MP E + ++W+TLLAAS++H + ++ + AA+ + ++P H YVL+
Sbjct: 591 GKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLC 650
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
NIY A G + E ++ MR V+K+PG SW++LK L FI DRSHPE++ IYA L
Sbjct: 651 NIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAML 709
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 228/492 (46%), Gaps = 35/492 (7%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYML--RTGIIDSPLSITS-----LINMYSKCCQMKYALFV 89
A + C+ +L +G+ +H +++ + D+ L+ + LI MY +
Sbjct: 49 ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR---------- 98
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
N ++ ++I+ N A L F+ M + G D++ ++ C ++
Sbjct: 99 --------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 150
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V +++H K D+ + +ALV Y K +++ +FE + +D++ W +++ G
Sbjct: 151 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 210
Query: 210 YAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+AQ G +AL+VFR M EG + F A +G ++ G +HG+ +K D
Sbjct: 211 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 270
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V +L DMY + K + A F +E D+ SWNSI+ + G L LF M
Sbjct: 271 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 330
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+G +PD +T +L AC AL HGR IH Y+V GL DV + N+L+ M
Sbjct: 331 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLD--------GDVSVCNSLLSM 382
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +C + A VF ++ +DV +WN ++ +E L +FS + +++ D ++
Sbjct: 383 YARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISL 442
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VLSA + G+ ++ + + G+V +ID + G L++A L M
Sbjct: 443 NNVLSASAELGYFEMVKQ-VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMG 501
Query: 509 NEANPVVWRTLL 520
N + W +L+
Sbjct: 502 NNRDVFSWSSLI 513
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 11/334 (3%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+ V W +++ + Q G AL +F M + G +F + + A +G GR V
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +K S + V NAL+ MY K V + +FE +++KD+ SW SI+ Q G
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217
Query: 318 DGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
L++F M+ G P+ F + AC + + +G QIHG + L +
Sbjct: 218 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR------- 270
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+++ +L DMY +C ++ A++ F ++ D+ SWN ++ Y ++G EAL +FS M
Sbjct: 271 -DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
++ L+PD +T G+L AC L GR + + G+ + ++ M R
Sbjct: 330 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLLSMYARCSD 388
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
L+ A ++ + ++ + V W ++L A H + +
Sbjct: 389 LSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPE 421
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 336/594 (56%), Gaps = 10/594 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F TC LQ C NL +G++IH ++++ G + TSLI+MYS+C + A V
Sbjct: 177 FNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKV 236
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
++NL+ + +V N MIS + K + F H+ G+ P+ YTF +I C +
Sbjct: 237 YSNLAYK-DVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDID 295
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V ++ +HG+ K G ++ +G+A+V+ Y+K +EEA K F + R++V W A+++G
Sbjct: 296 VEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSG 355
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y + G KALE F ++ + G+ +L G +HG VVK+GY
Sbjct: 356 YVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHD 415
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V ALID+Y K + + A +F + +K+I S+N+I++ + D + LF ++
Sbjct: 416 VSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIGADEED-AMALFSQLRL 474
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
A +PD VTF+ +L + A L+ G+ +H YI+ G N S + NA++ MY
Sbjct: 475 ADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPS--------VGNAVITMY 526
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ DA +F M+ D SWN +I Y + GQG++AL +F M + + PDE+T +
Sbjct: 527 AKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITIL 586
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL ACS+SG L +G MES+YG+ P IEH+ C++D+LGRAG L+EA P
Sbjct: 587 SVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPF 646
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+P++WRTL+ +LHG+ + +IA++ + L P G+Y+L+SN+Y GG E +
Sbjct: 647 SGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARV 706
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
R M V K G SWIE+ + +H F++SD+ HPE+K IYA+L L + ++++
Sbjct: 707 RTVMNDLKVSKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMKQN 760
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 256/497 (51%), Gaps = 14/497 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ+ +L GQ IH+++ + G + +L+N+Y K ++ A VF+ + N
Sbjct: 85 LQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVR-N 143
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ +I G + M +G +++T +++ C + ++ ++IHG
Sbjct: 144 TITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHG 203
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K G D DV++G++L++ Y +C + A KV+ L +DV N M++ Y + G K
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ VF + G+ + +T T V+SA + RV+HG+ +K G + V NA++
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K + EA + F M E+++ SW ++++ + + GN L F ++L G D
Sbjct: 324 VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCC 383
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+T+L CS L G QIHG++V G + DV + AL+D+Y KC +R A
Sbjct: 384 FATLLDGCSECKNLGLGLQIHGFVVKLGY--------VHDVSVGTALIDLYAKCRKLRSA 435
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
++VF + K++ S+N ++ GY + ++A+ +FS + A +KPD VTF +LS +
Sbjct: 436 RLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQ 494
Query: 459 GFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +G+ ++++ + P++ + VI M + G + +A +L +M N + + W
Sbjct: 495 ACLVKGKCLHAYIIKTGFEANPSVGN--AVITMYAKCGSIGDACQLFYSM-NYLDSISWN 551
Query: 518 TLLAASRLHGNTDLAEI 534
+++A LHG A I
Sbjct: 552 AVISAYALHGQGRKALI 568
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 10/292 (3%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H + K+GY + N L+++YGK +G+A +F+ M ++ +W +++ H Q
Sbjct: 97 GQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQ 156
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
+ + R+ M G + + T S +L AC L L+ G QIHG+++ G
Sbjct: 157 VNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFD----- 211
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+DVF+ +L+ MY++CG + A+ V++ ++ KDV N MI YG G G++A+ +F
Sbjct: 212 ---EDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVF 268
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+ + L+P++ TF V+SAC+ + R L M + G I ++ + +
Sbjct: 269 LHLLGSGLEPNDYTFTNVISACNGDIDVEVLR-VLHGMCIKCGCGDEISVGNAIVSVYVK 327
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
G L EA E + E N V W LL+ +GN A ++ +L G
Sbjct: 328 HGMLEEA-EKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVG 378
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/575 (35%), Positives = 326/575 (56%), Gaps = 14/575 (2%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMK-YALFVFNNLSCEPNVFTYNAMISGFYS 111
++H + L+T + T+ ++MY KC + + +FN+L N+ +YNA+I G+
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLP-NHNLQSYNAIIVGYAR 290
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+D + L F +++ G+ D+ + + C + LE ++HGL K ++ +
Sbjct: 291 SDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICV 350
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+A+++ Y KC + EA VFEE+ RD V WNA++ + Q G K L +F M + G+
Sbjct: 351 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 410
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEA 289
FT VL A G +H ++K MG DS V + ALIDMY K + +A
Sbjct: 411 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKA 468
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++ + + E+ + SWN+I++ + + F +ML G PD T++T+L C++L
Sbjct: 469 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 528
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ G+QIH I+ L D ++++ L+DMY+KCG+M+D Q++F K +D
Sbjct: 529 VTVELGKQIHAQIIKKELQS--------DAYISSTLVDMYSKCGNMQDFQLIFEKAPNRD 580
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+WN M+ GY G G+EAL +F M +KP+ TF+ VL AC H G + +G +
Sbjct: 581 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 640
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M S YG+ P +EHY+CV+D++GR+GQ+++A EL MP EA+ V+WRTLL+ ++HGN
Sbjct: 641 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNV 700
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
++AE AA + QLEP YVL+SNIY G + EV +R MR ++K PGCSWIE+
Sbjct: 701 EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEI 760
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K +H F+ D++HP +K IY L LT ++ G
Sbjct: 761 KSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 795
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 168/594 (28%), Positives = 274/594 (46%), Gaps = 93/594 (15%)
Query: 4 KISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI 63
K I+PFSS +T + +TF+H F Q C+ + L G++ H+ M+ T
Sbjct: 25 KTLPISPFSS--YQATPTKKKTFSHIF---------QECSDRKALCPGKQAHARMILTEF 73
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFKGLD 120
+ LI MY KC + +A VF+ + + + ++NAM+ G+ A K D
Sbjct: 74 KPTVFVTNCLIQMYIKCSDLGFAFKVFDGMP-QRDTVSWNAMLFGYAGRGDIGVAQKLFD 132
Query: 121 ------------FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
F M ++G + D+ TF ++K C + +IHGL K+G D D
Sbjct: 133 AMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCD 192
Query: 169 VYIGSALVNTYLKC-------------------------QFMEEALK------------- 190
V GSAL++ Y KC Q ALK
Sbjct: 193 VVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTAT 252
Query: 191 ----------------VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
+F LP ++ +NA++ GYA+ + +AL +FR + K G+ +
Sbjct: 253 LDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLD 312
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
+++G A ++ G VHG+ +K S + V NA++DMYGK + EA +FE
Sbjct: 313 EVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 372
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M +D SWN+I+ HEQ GN + TL LF ML +G +PD T+ +VL AC+ AL
Sbjct: 373 EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNC 432
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G +IH I+ + + D F+ AL+DMY+KCG M A+ + +++++ V SWN
Sbjct: 433 GMEIHNRIIKSRMGL--------DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 484
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMES 473
+I G+ + Q +EA FS M E + PD T+ +L C++ + G++ +++
Sbjct: 485 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 544
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
I + ++DM + G + + + PN + V W ++ HG
Sbjct: 545 ELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG 595
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 213/480 (44%), Gaps = 83/480 (17%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K TF + + C D A+ K+ H + V++ + L+ Y+KC + A KVF+
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFR---------------RMSKEGIWMSRFTV 238
+P RD V WNAM+ GYA G+ A ++F RM + G R T
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTF 161
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE-----ALEIF 293
VL + + G +HG+ VKMG+D V +AL+DMY K CV LE+F
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC-CVQNDDLRGGLELF 220
Query: 294 EMMEEK--------------------------------------------------DIFS 303
+ M++ ++ S
Sbjct: 221 KEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQS 280
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+N+I+ + + L +F + +G D V+ S AC+ + + G Q+H
Sbjct: 281 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVH---- 336
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
GL+ C+ ++ + NA++DMY KCG++ +A +VF +M +D SWN +I + +
Sbjct: 337 --GLSMKSLCQ--SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQN 392
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIE 482
G ++ L +F M ++ ++PDE T+ VL AC+ L+ G E +++SR G+ +
Sbjct: 393 GNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVG 452
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+IDM + G + +A +L + E V W +++ L ++ A+ ++ ++
Sbjct: 453 --IALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 509
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 156/306 (50%), Gaps = 1/306 (0%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+G ++H +++ + ++++MY KC + A VF + V ++NA+I+
Sbjct: 331 EGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV-SWNAIIAAH 389
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N K L F M Q G+ PD++T+ ++K C A+ +IH + K + LD
Sbjct: 390 EQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDS 449
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++G AL++ Y KC ME+A K+ + L + VV WNA+++G++ + +A + F +M +
Sbjct: 450 FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 509
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G+ FT +L + + G+ +H ++K S + + L+DMY K + +
Sbjct: 510 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDF 569
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IFE +D +WN+++ + Q G + L++F+ M +P+ TF VL AC H+
Sbjct: 570 QLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHM 629
Query: 350 AALMHG 355
+ G
Sbjct: 630 GLVEKG 635
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT L CA+ ++ G++IH+ +++ + ++L++MYSKC M+ +
Sbjct: 516 FTYATI---LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLI 572
Query: 90 FNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F PN T+NAM+ G+ + + L F +M+ V P+ TF +++ C
Sbjct: 573 FEK---APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGH- 628
Query: 148 MAVLE--VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
M ++E + H ++ GLD + S +V+ + + +AL++ E +P D V+W
Sbjct: 629 MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWR 688
Query: 205 AMVN 208
+++
Sbjct: 689 TLLS 692
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 328/592 (55%), Gaps = 9/592 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A+ + C+H L G+++H +++ D P TSL+ MY+K ++ A VF+
Sbjct: 245 ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQ 304
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + V NAMIS F N A+ L +N M+ D +T L+ C V +
Sbjct: 305 V-LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 363
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +H V K + +V I SAL+ Y KC E+A VF + RDVV W +M+ G+ Q
Sbjct: 364 GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQ 423
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
F AL++FR M KEG+ +T V+SA + + + G ++HG +K G +S V V
Sbjct: 424 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFV 483
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+L+DMY K A +F M K++ +WNS+++ + G + ++ L ++L GF
Sbjct: 484 ACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGF 543
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V+ +TVL A S +AAL+ G+ +H Y + + D+ + NAL+DMY KC
Sbjct: 544 YLDSVSITTVLVAVSSVAALLKGKTLHAYQI--------RLQIPSDLQVENALIDMYVKC 595
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ AQ++F M ++++ +WN MI GYG G +EA+ +F M ++ PDEVTF+ ++
Sbjct: 596 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 655
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
++CSHSG + +G LM YGV P +EHY V+D+LGRAG+L++AY MP +A+
Sbjct: 656 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 715
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LL A R H N +L E+ A + ++EP NYV + N+Y ++ ++R +
Sbjct: 716 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 775
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ + ++K+PGCSWIE+K+ + F S D S IY L SL + + G
Sbjct: 776 MKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 827
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 231/482 (47%), Gaps = 10/482 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G++IH Y++R P T+LI MYS C + A +F L N+ +N MI GF
Sbjct: 161 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 220
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N K L+ ++ + +F C + +++H V K+ D Y
Sbjct: 221 ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 280
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++L+ Y K +E+A KVF+++ ++V L NAM++ + G + AL ++ +M
Sbjct: 281 VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE 340
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ FT++ +LS ++G + GR VH V+K S V + +AL+ MY K +A
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F M+E+D+ +W S++ Q L LF M G + D ++V+ A L
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+ G IHG+ + GL DVF+ +L+DMY+K G A+MVF+ M K++
Sbjct: 461 NVELGHLIHGFAIKRGLE--------SDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNL 512
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI Y +G + ++++ + + D V+ VL A S L +G+ L
Sbjct: 513 VAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKT-LHA 571
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ R + ++ +IDM + G L A + MP N V W +++A HGN +
Sbjct: 572 YQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMIAGYGSHGNCE 630
Query: 531 LA 532
A
Sbjct: 631 EA 632
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/502 (27%), Positives = 240/502 (47%), Gaps = 40/502 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ CA +NL G+ IH+ ++ G+ P TSLINMY KC + AL VF+ +S
Sbjct: 62 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 121
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
P++ +N +I G++ +GL F M++L + +
Sbjct: 122 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELS-------------------WYMAGR 162
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQI 213
+IHG + + + D Y+ +AL+ Y C EA +F +L R ++V WN M+ G+ +
Sbjct: 163 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + K+LE++ E + + TG +A GR VH V+KM + V
Sbjct: 223 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 282
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+L+ MY K V +A ++F+ + +K++ N++++ G L L+++M +
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 342
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D T S++L CS + + GR +H ++ + N V + +AL+ MY KCG
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN--------VAIQSALLTMYYKCG 394
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S DA VF M ++DV +W MI G+ + + K+ALD+F M + +K D V+S
Sbjct: 395 STEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVIS 454
Query: 454 ACSHSGFLSQGREFLPLMES---RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
A G + E L+ + G+ + ++DM + G A + +MPN+
Sbjct: 455 A----GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK 510
Query: 511 ANPVVWRTLLAASRLHGNTDLA 532
N V W ++++ +G +++
Sbjct: 511 -NLVAWNSMISCYSWNGLPEMS 531
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+++ ++ C+ + G+ +H+ +++ + + ++L+ MY KC + A V
Sbjct: 346 FTISSLLSG---CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 402
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E +V + +MI+GF N LD F M + GV D +I +
Sbjct: 403 FYTMK-ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN 461
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V IHG K GL+ DV++ +LV+ Y K F E A VF +P +++V WN+M++
Sbjct: 462 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISC 521
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+ G ++ + ++ + G ++ ++T VL A+ + G+ +H +++ S
Sbjct: 522 YSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSD 581
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NALIDMY K C+ A IFE M +++ +WNS++ + GN + +RLF M
Sbjct: 582 LQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKR 641
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
+ PD VTF ++ +CSH + G
Sbjct: 642 SETAPDEVTFLALITSCSHSGMVEEG 667
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 185/395 (46%), Gaps = 35/395 (8%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K+TFP L+K C + + + IH + +GL D YI ++L+N Y+KC + AL+VF+
Sbjct: 55 KFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFD 114
Query: 194 EL-----PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++ D+ +WN +++GY + G F + L F RM + +
Sbjct: 115 KMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQE-------------------L 155
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSI 307
++ GR +HG +++ ++ + ALI MY EA +F +E + +I +WN +
Sbjct: 156 SWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVM 215
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + G + +L L+ + + +F+ ACSH L GRQ+H ++
Sbjct: 216 IGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNF 275
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DD ++ +L+ MY K GS+ DA+ VF ++ K+V N MI + +G+
Sbjct: 276 Q--------DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAY 327
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+AL +++ M + D T +LS CS G GR + R + + + +
Sbjct: 328 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR-SMQSNVAIQSAL 386
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ M + G +A + M E + V W +++A
Sbjct: 387 LTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIAG 420
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 33/269 (12%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+ + Q G++ +ALE+ + + ++FT +L + +GR +H +V
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-----DIFSWNSIMTVHEQCGNHD 318
MG S + +LI+MY K +G AL++F+ M E DI WN ++ + + G+ +
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
L F RM L+ M GRQIHGYI+ N D
Sbjct: 144 EGLAQFCRM-------------------QELSWYMAGRQIHGYIIRNMFE--------GD 176
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
++ AL+ MY+ C +A +F K+ ++ ++ +WN+MI G+ +G +++L+++S
Sbjct: 177 PYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAK 236
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
K +F G +ACSH L GR+
Sbjct: 237 NENCKLVSASFTGAFTACSHGEVLDFGRQ 265
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 33/225 (14%)
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S NS + Q G + L L + + TF ++L C+ L+ L HGR IH I
Sbjct: 22 SINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI 81
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-----DVASWNIMI 417
V GL D ++ +L++MY KCG + A VF KMS+ D+ WN +I
Sbjct: 82 VTMGLQ--------SDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 133
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY G +E L F M E S +++ + ++ + +
Sbjct: 134 DGYFKYGHFEEGLAQFCRMQEL------------------SWYMAGRQIHGYIIRNMFEG 175
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
P +E T +I M + EA+ L + N +N V W ++
Sbjct: 176 DPYLE--TALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGG 218
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 340/591 (57%), Gaps = 19/591 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ SL +L+ ++ HS +L G+ + L T LI Y+ C ++ VF++L
Sbjct: 27 LQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQ- 85
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NVF +N++I+G+ N + FN M VLPD +T L K ++ A+ K
Sbjct: 86 HKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG ++G D + +++++ Y KC EE+ KVF+E+ +R+ WN ++ GYA G
Sbjct: 146 IHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205
Query: 216 FH---KALEVFRRMSKEGIWMSRFTVTGVLSALIM-MGFFKNGRVVHGIVVK----MGYD 267
+ + E ++M + + +T++ +L G + GR +H +VK +G D
Sbjct: 206 CNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLD 265
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF-DR 326
S V + LIDMY + V +F+ M+ +++FSW +++ + + G+ D L LF D
Sbjct: 266 SDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDM 325
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ G +P+ V+ +VLPACS + L+ GRQIHG+ V L ++V + NAL+
Sbjct: 326 QVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELN--------NEVSLCNALI 377
Query: 387 DMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
DMY+KCGS+ A+ VF S KD SW+ MI GYG+ G+G+EA+ ++ M +A ++PD
Sbjct: 378 DMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDM 437
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+T VG+LSACS SG +++G + + YG+ PT+E + C++DMLGRAGQL+ A +
Sbjct: 438 ITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIK 497
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
AMP E P VW L++ S +HG+ ++ E+A + + QLEP + NYV +SN+Y + +++
Sbjct: 498 AMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDA 557
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
V ++R M+ + +RK PGCSWI + + H F +D++HP A SIY L L
Sbjct: 558 VAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDL 608
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 328/592 (55%), Gaps = 9/592 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A+ + C+H L G+++H +++ D P TSL+ MY+K ++ A VF+
Sbjct: 650 ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQ 709
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + V NAMIS F N A+ L +N M+ D +T L+ C V +
Sbjct: 710 V-LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDF 768
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +H V K + +V I SAL+ Y KC E+A VF + RDVV W +M+ G+ Q
Sbjct: 769 GRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQ 828
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
F AL++FR M KEG+ +T V+SA + + + G ++HG +K G +S V V
Sbjct: 829 NRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFV 888
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+L+DMY K A +F M K++ +WNS+++ + G + ++ L ++L GF
Sbjct: 889 ACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGF 948
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V+ +TVL A S +AAL+ G+ +H Y + + D+ + NAL+DMY KC
Sbjct: 949 YLDSVSITTVLVAVSSVAALLKGKTLHAYQI--------RLQIPSDLQVENALIDMYVKC 1000
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ AQ++F M ++++ +WN MI GYG G +EA+ +F M ++ PDEVTF+ ++
Sbjct: 1001 GCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALI 1060
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
++CSHSG + +G LM YGV P +EHY V+D+LGRAG+L++AY MP +A+
Sbjct: 1061 TSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDAD 1120
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LL A R H N +L E+ A + ++EP NYV + N+Y ++ ++R +
Sbjct: 1121 RSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRAS 1180
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ + ++K+PGCSWIE+K+ + F S D S IY L SL + + G
Sbjct: 1181 MKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKG 1232
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 250/502 (49%), Gaps = 21/502 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ CA +NL G+ IH+ ++ G+ P TSLINMY KC + AL VF+ +S
Sbjct: 448 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 507
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
P++ +N +I G++ +GL F M++LG+ PD Y+ ++ C + + +
Sbjct: 508 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGR 567
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQI 213
+IHG + + + D Y+ +AL+ Y C EA +F +L R ++V WN M+ G+ +
Sbjct: 568 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 627
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + K+LE++ E + + TG +A GR VH V+KM + V
Sbjct: 628 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 687
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+L+ MY K V +A ++F+ + +K++ N++++ G L L+++M +
Sbjct: 688 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 747
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D T S++L CS + + GR +H ++ + N V + +AL+ MY KCG
Sbjct: 748 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSN--------VAIQSALLTMYYKCG 799
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S DA VF M ++DV +W MI G+ + + K+ALD+F M + +K D V+S
Sbjct: 800 STEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVIS 859
Query: 454 ACSHSGFLSQGREFLPLMES---RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
A G + E L+ + G+ + ++DM + G A + +MPN+
Sbjct: 860 A----GLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK 915
Query: 511 ANPVVWRTLLAASRLHGNTDLA 532
N V W ++++ +G +++
Sbjct: 916 -NLVAWNSMISCYSWNGLPEMS 936
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 25/445 (5%)
Query: 84 KYALFVFNNLSCEPNVFTYNAMIS-GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
K A+ NL P V A++ G YS + L+ + + K+TFP L+K
Sbjct: 398 KKAVLELMNL---PQVEEIKALVQQGKYS-----QALELHSKTPHSALTTAKFTFPSLLK 449
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-----L 197
C + + + IH + +GL D YI ++L+N Y+KC + AL+VF+++
Sbjct: 450 TCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSA 509
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
D+ +WN +++GY + G F + L F RM + GI ++++ VL + ++ GR +
Sbjct: 510 PDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQI 569
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGN 316
HG +++ ++ + ALI MY EA +F +E + +I +WN ++ + G
Sbjct: 570 HGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGM 629
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ +L L+ + + +F+ ACSH L GRQ+H ++
Sbjct: 630 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQ-------- 681
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DD ++ +L+ MY K GS+ DA+ VF ++ K+V N MI + +G+ +AL +++ M
Sbjct: 682 DDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM 741
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ D T +LS CS G GR + R + + + ++ M + G
Sbjct: 742 KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR-SMQSNVAIQSALLTMYYKCGS 800
Query: 497 LNEAYELALAMPNEANPVVWRTLLA 521
+A + M E + V W +++A
Sbjct: 801 TEDADSVFYTM-KERDVVAWGSMIA 824
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+++ ++ C+ + G+ +H+ +++ + + ++L+ MY KC + A V
Sbjct: 751 FTISSLLSG---CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 807
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E +V + +MI+GF N LD F M + GV D +I +
Sbjct: 808 FYTMK-ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN 866
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V IHG K GL+ DV++ +LV+ Y K F E A VF +P +++V WN+M++
Sbjct: 867 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISC 926
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+ G ++ + ++ + G ++ ++T VL A+ + G+ +H +++ S
Sbjct: 927 YSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSD 986
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NALIDMY K C+ A IFE M +++ +WNS++ + GN + +RLF M
Sbjct: 987 LQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKR 1046
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
+ PD VTF ++ +CSH + G
Sbjct: 1047 SETAPDEVTFLALITSCSHSGMVEEG 1072
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/602 (36%), Positives = 333/602 (55%), Gaps = 58/602 (9%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM------KYALFV 89
+++LQ C L+ +IH+ +++T + SP + ++ S C +YAL +
Sbjct: 41 LSTLQTCKSIKGLK---QIHASIIKT--MPSPDAQLTISTRLSALCAQSLPIDPRYALSL 95
Query: 90 FNNLSCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
L PN+ YNA+I G SN+ + +GL + M G++PD YT P ++K C +
Sbjct: 96 LAQLRT-PNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESR 154
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
AV E +++HG K+GL DVY+ + L+ Y C + A KVF+ P RD+V W M+
Sbjct: 155 AVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQ 214
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY ++G ++EG+ G + I+ +
Sbjct: 215 GYVKMG-----------FAREGV-----------------GLY--------IIRNSNVNL 238
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V NAL+DMY K A ++F+ M K++ SWNS+++ Q G +L +F +M
Sbjct: 239 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 298
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +PD VT VL +C++L L G+ +H Y+ N + +G F+ NAL+DM
Sbjct: 299 RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADG--------FIGNALVDM 350
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ A VF M++KDV S+ MI+G M GQG +ALD+FS M + ++PDEVTF
Sbjct: 351 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 410
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VGVL+ACSH G + +GR++ M + Y + P +EHY C++D+LGRAG +NEA E MP
Sbjct: 411 VGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP 470
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E + V LL A ++HG +L E +++ ++EP G YVLMSNIY + ++ + L
Sbjct: 471 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALK 530
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA 628
+R TM+++N+ K PGCS IEL +H F D+SHP+ K IY L + + L+ + +C
Sbjct: 531 LRKTMKERNLEKTPGCSSIELDGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLK-NNECLT 589
Query: 629 GT 630
T
Sbjct: 590 RT 591
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 12/191 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A L CA+ L+ G+ +H+Y+ R I +L++MY+KC + A +VF +
Sbjct: 308 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAM 367
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V++Y AMI G + K LD F+ M ++G+ PD+ TF ++ C V V E
Sbjct: 368 N-RKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEG 426
Query: 154 KKIH---GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM--- 206
+K ++ L L+ Y +V+ + + EA + +P+ D + A+
Sbjct: 427 RKYFEDMSTIYNLRPQLEHY--GCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGA 484
Query: 207 --VNGYAQIGE 215
++G ++GE
Sbjct: 485 CKIHGKVELGE 495
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/645 (33%), Positives = 340/645 (52%), Gaps = 79/645 (12%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
K + H+ +L++G + LI YS A + ++ +P V++++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIP-DPTVYSFSSLIYAL 91
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + F+ M G++PD + P L K C ++ A K+IH + GLD+D
Sbjct: 92 TKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDA 151
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ +L + Y++C M +A KVF+ + +DVV +A++ GYA+ G + + + M K
Sbjct: 152 FVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211
Query: 230 GIWMSRFTVTGVLSALIMMGFFKN-----------------------------------G 254
GI + + G+LS G+ K G
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK-------------------GKC---------- 285
R +HG V+K G V++A++DMYGK G C
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331
Query: 286 --VGEALEIFEMMEEK----DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
V +ALE+F + +E+ ++ SW SI+ Q G L LF M AG +P+ VT
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++LPAC ++AAL HGR HG+ V L +DDV + +AL+DMY KCG ++ +Q
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHL--------LDDVHVGSALIDMYAKCGRIKMSQ 443
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+VF M K++ WN ++ GY M G+ KE + +F + +LKPD ++F +LSAC G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+G ++ +M YG+ P +EHY+C++++LGRAG+L EAY+L +P E + VW L
Sbjct: 504 LTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGAL 563
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L + RL N DLAEIAAQ++F LEP + G YVLMSNIY A G + EV IR+ M ++
Sbjct: 564 LNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
KNPGCSWI++K+ ++T ++ D+SHP+ I ++ ++ +R+ G
Sbjct: 624 KNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSG 668
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 73/407 (17%)
Query: 17 FSTSSG--NQTFNHPFTLATCIAS--LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS 72
FS S G ++ F+H T + ++CA + + G++IH +G+ S
Sbjct: 97 FSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGS 156
Query: 73 LINMYSKCCQMKYALFVFNNLS----------------------------------CEPN 98
L +MY +C +M A VF+ +S EPN
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N ++SGF + + + + F M LG PD+ T ++ D + ++IHG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD------------------- 199
V K GL D + SA+++ Y K + +K+F+E + +
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336
Query: 200 ----------------VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
VV W +++ G AQ G+ +ALE+FR M G+ +R T+ +L
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A + +GR HG V++ V V +ALIDMY K + + +F MM K++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
WNS+M + G + +F+ ++ +PD ++F+++L AC +
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + L G+ H + +R ++D ++LI+MY+KC ++K + VFN +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ +N++++G+ + A + + F + + + PD +F L+ C V E
Sbjct: 450 PTK-NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 154 KKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
K ++ + G+ + S +VN + ++EA + +E+P D +W A++N
Sbjct: 509 WKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLN 565
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/601 (35%), Positives = 337/601 (56%), Gaps = 18/601 (2%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
TF+ FT A+ ++S+ GQ+ H+ ++ +SL+NMY K +
Sbjct: 112 HTFSGIFTAASNLSSIFF---------GQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLL 162
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+ + E N T+ MISG+ A + + F MR+ +++ F ++
Sbjct: 163 FEAREVFDRMP-ERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSA 221
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
V K+IH L K GL + + I +ALV Y KC ++++L+VFE ++ + W
Sbjct: 222 LAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITW 281
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
+AM+ GYAQ G+ HKAL++F RM GI S FT+ GVL+A + G+ VH ++K
Sbjct: 282 SAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLK 341
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+G++S + +M AL+DMY K +A + F +++ D+ W S++ + Q G ++ L L
Sbjct: 342 LGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSL 401
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ RM G P+ +T ++VL ACS+LAA GRQIH + GL +V + +
Sbjct: 402 YCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGL--------EVTIGS 453
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL MY KCG++ + +VF +M ++D+ SWN MI G +G GKEAL++F M + KP
Sbjct: 454 ALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKP 513
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+VTFV VLSACSH G + G + +M +G++P +EHY C++D+L RAG+L EA E
Sbjct: 514 DDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEF 573
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
+ + +WR LL A R + N +L A +++ +L YVL+S IY A G+
Sbjct: 574 IESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRP 633
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
E+V +R M+ + V K PGCSWIELK +H F+ D+ HP I E+ L+ ++++
Sbjct: 634 EDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDE 693
Query: 624 G 624
G
Sbjct: 694 G 694
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 266/503 (52%), Gaps = 15/503 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYA 86
HP L++ + +Q HQ +LQKG+ +H+ +++ S + + SLIN Y+KCC + A
Sbjct: 4 HPQNLSSFNSLVQF-THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG--LDFFNHMRQLGVLPDKYTFPCLIKCC 144
VF+ + +V ++N +I+G+ ++ F MR +LP+ +TF +
Sbjct: 63 KLVFDRIH-NKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAA 121
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
++ ++ ++ H + K+ DV++GS+L+N Y K + EA +VF+ +P R+ V W
Sbjct: 122 SNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWA 181
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M++GYA +A EVF M +E ++ F T VLSAL + F +G+ +H + VK
Sbjct: 182 TMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKT 241
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G + ++NAL+ MY K + ++L++FEM +K+ +W++++T + Q G+ L+LF
Sbjct: 242 GLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLF 301
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
RM AG P T VL ACS A+ G+Q+H Y++ G +++ A
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQ--------LYIMTA 353
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY K G DA+ F + + D+ W MI GY +G+ ++AL ++ M + P+
Sbjct: 354 LVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPN 413
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
E+T VL ACS+ QGR+ + +YG+ + + + M + G L E +
Sbjct: 414 ELTMASVLKACSNLAAFDQGRQ-IHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVF 472
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
MP E + + W +++ +G
Sbjct: 473 RRMP-ERDIISWNAMISGLSQNG 494
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 126/310 (40%), Gaps = 25/310 (8%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L+ C++ +G++IH+ ++ G+ ++L MY+KC ++ VF +
Sbjct: 416 TMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRM 475
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E ++ ++NAMISG N + + L+ F MRQ PD TF ++ C + V
Sbjct: 476 P-ERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG 534
Query: 154 KKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYA 211
++F + GL V + +V+ + + EA + E + + LW ++
Sbjct: 535 WLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACR 594
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ ++ + G S SA +++ GI +G V
Sbjct: 595 NYRNYELGAYAGEKLMELGSQES--------SAYVLLS---------GIYTALGRPEDVE 637
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN-HDGTLRLFDRMLSA 330
+ +++ + G K G E+ +F M H G LRL +M
Sbjct: 638 RVRSMMKVRGVSKEPG--CSWIELKSNVHVFVVGDQM--HPCIGEIRTEILRLSKQMKDE 693
Query: 331 GFQPDLVTFS 340
G+QP VT S
Sbjct: 694 GYQPASVTDS 703
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/596 (36%), Positives = 337/596 (56%), Gaps = 16/596 (2%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+Y+ + G T+LI+ YS C + A VF+ + + ++ ++ M++ + N
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFK-DMVSWTGMVACYAENY 184
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L F MR +G P+ +T +K C + A K +HG K+ D D+Y+G
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL+ Y K + EA + FEE+P D++ W+ M++ YAQ + +ALE+F RM + + +
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304
Query: 234 -SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ FT VL A + G +H V+K+G DS V V NAL+D+Y K + ++++
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKL 364
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F EK+ +WN+I+ + Q G+ + L LF ML QP VT+S+VL A + L AL
Sbjct: 365 FTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVAL 424
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQIH + K D + N+L+DMY KCG + DA++ F KM K+D S
Sbjct: 425 EPGRQIHSLTIKTMYNK--------DSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS 476
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I GY + G G EAL++F M ++ KP+++TFVGVLSACS++G L +GR M
Sbjct: 477 WNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSML 536
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
YG+ P IEHYTC++ +LGR+GQ +EA +L +P + + +VWR LL A +H N DL
Sbjct: 537 QDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLG 596
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
++ AQRV ++EP +VL+SN+Y +++ V +R M+++ V+K PG SW+E +
Sbjct: 597 KVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGV 656
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGTLFDSDSTASGFEKHRL 646
+H F D SHP K I+A L L + R+ G C+ L D + EK RL
Sbjct: 657 VHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDD----EKERL 708
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/492 (28%), Positives = 249/492 (50%), Gaps = 16/492 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ + G+ +H ++L+ G + L+N Y ++ A +F+ + N
Sbjct: 10 LQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPL-TN 68
Query: 99 VFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ + GF S+ F R+ G +++ F L+K + +H
Sbjct: 69 TVSFVTLAQGFSRSHQFQRARRLLLRLFRE-GYEVNQFVFTTLLKLLVSMDLADTCLSVH 127
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V+KLG D ++G+AL++ Y C ++ A +VF+ + +D+V W MV YA+
Sbjct: 128 AYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHE 187
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+L +F +M G + FT++ L + + FK G+ VHG +K+ YD + V AL+
Sbjct: 188 DSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALL 247
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQPDL 336
++Y K + EA + FE M + D+ W+ +++ + Q L LF RM S+ P+
Sbjct: 248 ELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNN 307
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
TF++VL AC+ L L G QIH ++ GL N VF++NALMD+Y KCG +
Sbjct: 308 FTFASVLQACASLVLLNLGNQIHSCVLKVGLDSN--------VFVSNALMDVYAKCGEIE 359
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
++ +FT ++K+ +WN +I+GY G G++AL++FS M ++P EVT+ VL A +
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419
Query: 457 HSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L GR+ L +++ Y + + +IDM + G++++A L ++ + V
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVAN--SLIDMYAKCGRIDDA-RLTFDKMDKQDEVS 476
Query: 516 WRTLLAASRLHG 527
W L+ +HG
Sbjct: 477 WNALICGYSIHG 488
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 143/281 (50%), Gaps = 6/281 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ LQ CA L G +IHS +L+ G+ + +L+++Y+KC +++ ++ +
Sbjct: 308 FTFASV---LQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKL 364
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F S E N +N +I G+ K L+ F++M L + P + T+ +++ ++A
Sbjct: 365 FTG-STEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVA 423
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++IH L K + D + ++L++ Y KC +++A F+++ +D V WNA++ G
Sbjct: 424 LEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICG 483
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYDS 268
Y+ G +AL +F M + ++ T GVLSA G GR ++ G +
Sbjct: 484 YSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEP 543
Query: 269 GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIM 308
+ ++ + G+ EA+++ E+ + + W +++
Sbjct: 544 CIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALL 584
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 341/601 (56%), Gaps = 12/601 (1%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMK 84
N + T + L A +L+ G+++H +++G+ DS +S+ SL+NMYSK
Sbjct: 898 LNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGL-DSDVSVANSLVNMYSKMGCAY 956
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+A VFN++ ++ ++N+MIS + + ++ F + G+ PD +T +++ C
Sbjct: 957 FAREVFNDMK-HLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRAC 1015
Query: 145 CDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
++ L + ++IH K G D ++ + L++ Y K MEEA +F+ D+ W
Sbjct: 1016 SSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACW 1075
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NAM+ GY + KALE+F + K G + T+ A + G+ +H +K
Sbjct: 1076 NAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK 1135
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G+DS + V + ++DMY K + A +F + D +W S+++ GN D LR+
Sbjct: 1136 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 1195
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ RM + PD TF+T++ A S + AL GRQ+H ++ + D F+
Sbjct: 1196 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI--------KLDCVSDPFVGT 1247
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+L+DMY KCG++ DA +F KM+ +++A WN M++G G +EA+++F M ++P
Sbjct: 1248 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 1307
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D V+F+G+LSACSH+G S+ E+L M + YG+ P IEHY+C++D LGRAG + EA ++
Sbjct: 1308 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 1367
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP +A+ + R LL A R+ G+ + + A R+F LEP YVL+SNIY A ++
Sbjct: 1368 IETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 1427
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++V D R M+++NV+K+PG SWI++K+ LH F+ DRSHP+A IY ++ + +RE
Sbjct: 1428 DDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED 1487
Query: 624 G 624
G
Sbjct: 1488 G 1488
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 237/512 (46%), Gaps = 37/512 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T L+LC + L + +H Y ++ G+ +L+N+YSKC +M+ A +F
Sbjct: 726 TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 785
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + E +V +N M+ G+ + F+ + G+ PD+++ ++ V
Sbjct: 786 DWMR-ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN------GV 838
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
EV G +L Q A K+ DV WN ++
Sbjct: 839 SEVNWDEG-------------------KWLADQVQAYAAKLSLSDDNPDVFCWNKKLSEC 879
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G+ A+E F M+ I T+ VL+A+ + G+ VHGI VK G DS V
Sbjct: 880 LWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDV 939
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+L++MY K C A E+F M+ D+ SWNS+++ Q + ++ LF +L
Sbjct: 940 SVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 999
Query: 331 GFQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD T ++VL ACS L L RQIH + + G +I D F+ L+D+Y
Sbjct: 1000 GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTG--------NIADSFVATTLIDVY 1051
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K G M +A+ +F D+A WN M+ GY + GK+AL++FS + ++ K D++T
Sbjct: 1052 SKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLA 1111
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
AC L QG++ + + G + + ++DM + G + A + +
Sbjct: 1112 TAAKACGCLVLLDQGKQ-IHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNA-GIVFNYIS 1169
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
+ V W ++++ +GN D A R+ Q
Sbjct: 1170 APDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 224/485 (46%), Gaps = 52/485 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL G+ H+ ++ +G +L+ MYSKC + A VF+ + E ++ T+NA++
Sbjct: 636 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDT-TPERDLVTWNAIL 694
Query: 107 SGFY----SND-FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ SND A +GL F +R + T ++K C + + + +HG
Sbjct: 695 GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 754
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+GL+ DV++ ALVN Y KC M +A +F+ + RDVVLWN M+ GY Q+G +A +
Sbjct: 755 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 814
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F + G+ F+V +L+ GV +N +
Sbjct: 815 LFSEFHRSGLRPDEFSVQLILN-------------------------GVSEVN-----WD 844
Query: 282 KGKCVGEALEIFEMM-----EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+GK + + ++ + + D+F WN ++ G++ G + F M D
Sbjct: 845 EGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDA 904
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT VL A + L G+Q+HG V +GL DV + N+L++MY+K G
Sbjct: 905 VTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDS--------DVSVANSLVNMYSKMGCAY 956
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF M D+ SWN MI +E++++F + LKPD T VL ACS
Sbjct: 957 FAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS 1016
Query: 457 H-SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L+ R+ + + + G + T +ID+ ++G++ EA E ++ +
Sbjct: 1017 SLIDGLNISRQ-IHVHALKTGNIADSFVATTLIDVYSKSGKMEEA-EFLFQNKDDLDLAC 1074
Query: 516 WRTLL 520
W ++
Sbjct: 1075 WNAMM 1079
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 5/215 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ +L K H + G D ++ + L+ Y KC + A +VF+ P RD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 200 VVLWNAMVNGYA-----QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+V WNA++ YA G + L +FR + +R T+ VL + G
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
VHG +K+G + V V AL+++Y K + +A +F+ M E+D+ WN ++ + Q
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
G +LF +G +PD + +L S +
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV 841
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 345/618 (55%), Gaps = 15/618 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT L +CA + +L G ++HS ++ G+ +L++MY+KC + A +F
Sbjct: 243 ATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFEL 302
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L ++ T+N MISG N + L F M + G PD T L+ D+ + +
Sbjct: 303 LP-RDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQ 361
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++HG + + + +D ++ SALV+ Y KC+ + A +++ DVV+ + +++GY
Sbjct: 362 GKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVL 421
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G KAL++FR + ++ I + TV VL A + G+ +HG V++ Y+ V
Sbjct: 422 NGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYV 481
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+AL+DMY K + + IF M KD +WNS+++ Q G L LF +M G
Sbjct: 482 ESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGI 541
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + VT S+ L AC+ L A+ +G++IHG +++ G K D+F +AL+DMY KC
Sbjct: 542 KYNNVTISSALSACASLPAIYYGKEIHG-VIIKGPIKA-------DIFAESALIDMYAKC 593
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+M A VF M K+ SWN +I YG G KE++ M E KPD VTF+ ++
Sbjct: 594 GNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALI 653
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC+H+G + +G + M Y + P +EH+ C++D+ R+G+L++A + MP + +
Sbjct: 654 SACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPD 713
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W LL A R+H N +LA+IA+Q +F+L+PG+ G YVLMSNI G+++ V +R
Sbjct: 714 AGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRL 773
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-----DCC 627
M+ + K PG SW+++ + H F++SD+SHPE++ IY L +L LRE G D C
Sbjct: 774 MKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLC 833
Query: 628 AGTLFDSDSTASGFEKHR 645
+ ++T GF+K++
Sbjct: 834 -HPMHPDNNTQVGFKKYK 850
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 151/523 (28%), Positives = 262/523 (50%), Gaps = 19/523 (3%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLI 74
+T S + + +A L+ C +L G +IH+ + +G + + + T L+
Sbjct: 18 TTFSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLL 77
Query: 75 NMYSKCCQMKYALFVFNNL--SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGV 130
MY + + A+ VF+ L + + +N +I GF + + F+ M
Sbjct: 78 GMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAP 137
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
PD +T P ++K C + AV + +H GL DVY+GSAL+ Y + +A
Sbjct: 138 SPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARD 197
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
F+ +P RD VLWN M++GY + G+ A+ +FR M G + T+ LS
Sbjct: 198 AFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEAD 257
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+G +H + VK G + V V N L+ MY K +C+ +A +FE++ D+ +WN +++
Sbjct: 258 LLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISG 317
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G D L LF ML +G +PD VT ++LPA + L L G+++HGYI+ N
Sbjct: 318 CVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRN----- 372
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
C + D F+ +AL+D+Y KC +R A+ ++ DV + +I GY ++G ++AL
Sbjct: 373 --CVHM-DAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKAL 429
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVID 489
MF + E +KP+ VT VL AC+ L G+E ++ + Y +E + ++D
Sbjct: 430 QMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMD 487
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
M + G+L+ ++ + M + + V W +++++ +G A
Sbjct: 488 MYAKCGRLDLSHYIFSKM-SLKDEVTWNSMISSFSQNGEPQEA 529
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 330/586 (56%), Gaps = 20/586 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT + I + C+ ++ G+++H+++L++ ++ +LI+MY+K + AL V
Sbjct: 165 FTFGSIIKA---CSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDV 221
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVM 148
F+ ++ ++ ++ +MI+GF + + L +F M GV LP+++ F + C ++
Sbjct: 222 FSRMATR-DLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLL 280
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+++HG+ K GL DV+ G +L + Y KC + A VF ++ D+V WNA++
Sbjct: 281 QPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIA 340
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A G+ +A+ F +M +G+ TV +L A G VHG + KMG D
Sbjct: 341 GFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDL 400
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGT---LRLF 324
VPV N L+ MY K + +A+ FE M D+ SWN+I+T C HD RL
Sbjct: 401 DVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTA---CMRHDQAEEVFRLL 457
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M + +PD +T + VL A + ++ G Q+H Y + GL +C D + N
Sbjct: 458 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGL----NC----DTSVTNG 509
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+D+Y KCGS++ A +F M DV SW+ +ILGY G G+EAL +F M +KP+
Sbjct: 510 LIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPN 569
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VTFVGVL+ACSH G + +G + ME +G+ PT EH +C++D+L RAG LNEA
Sbjct: 570 HVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFI 629
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
M + + VVW+TLLAA + HGN D+ + AA+ + +++P + +VL+ NIY + G +E
Sbjct: 630 HQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWE 689
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
+V +R M+Q+ VRK PG SWIE+KD +H F D HPE IY
Sbjct: 690 DVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIY 735
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/521 (28%), Positives = 258/521 (49%), Gaps = 15/521 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
TL+T + C++ +L+ G++IH +ML++ ++NMY KC +K A V
Sbjct: 61 LTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKV 120
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + E NV ++ ++I+G+ N L+F+ M Q GV+PD++TF +IK C +
Sbjct: 121 FDAMP-ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGD 179
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +++H V K + +AL++ Y K + +AL VF + RD++ W +M+ G
Sbjct: 180 IGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAG 239
Query: 210 YAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
++Q+G +AL F+ M +G+++ + F V SA + + GR +HG+ +K G
Sbjct: 240 FSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGR 299
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V +L DMY K + A +F + D+ +WN+I+ G+ + F +M
Sbjct: 300 DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMR 359
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G PD +T ++L AC+ + L G Q+HGYI GL D+ DV + N L+ M
Sbjct: 360 HQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGL-------DL-DVPVCNTLLTM 411
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
Y KC +RDA F +M D+ SWN ++ Q +E + MC ++ +PD +T
Sbjct: 412 YAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYIT 471
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
VL A + + + G + + + G+ +ID+ + G L A+++ +M
Sbjct: 472 LTNVLGASAETVSIEIGNQ-VHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM 530
Query: 508 PNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
N + V W +L+ A +G L R ++P H
Sbjct: 531 IN-PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNH 570
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 225/454 (49%), Gaps = 24/454 (5%)
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
A K +F ++ G T+ LI C + ++ KKIH + K D+ + +
Sbjct: 46 AIKAFEFLQ--KKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNH 103
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
++N Y KC+ +++A KVF+ +P R+VV W +++ GY+Q G+ ALE + +M + G+
Sbjct: 104 ILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPD 163
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
+FT ++ A +G GR +H V+K + + + NALI MY K + +AL++F
Sbjct: 164 QFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFS 223
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
M +D+ SW S++ Q G L F ML G + P+ F +V ACS L
Sbjct: 224 RMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+GRQ+HG + GL + DVF +L DMY KCG + A++VF ++ + D+ +W
Sbjct: 284 YGRQLHGMSIKFGLGR--------DVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAW 335
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I G+ G KEA+ FS M L PDE+T +L AC+ L QG + + +
Sbjct: 336 NAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYI-N 394
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G+ + ++ M + +L +A M A+ V W +L A H
Sbjct: 395 KMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ----- 449
Query: 534 IAAQRVFQLEPGHC-----GNYVLMSNIYVAGGK 562
A+ VF+L C +Y+ ++N+ A +
Sbjct: 450 --AEEVFRLLKLMCISQHRPDYITLTNVLGASAE 481
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/630 (33%), Positives = 342/630 (54%), Gaps = 38/630 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYA 86
P+ L L L A ++ ++IHS ++++G+ ++ + + LI S + YA
Sbjct: 19 PYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYA 78
Query: 87 LFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
L +F+++ +P N+F +N +I L F+ M G+ P+ +TFP L K C
Sbjct: 79 LSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCA 138
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGS-------------------------------A 174
A E K++H KL L L ++ + A
Sbjct: 139 KSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTA 198
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L+ Y+ +++A ++F+E+P +DVV WNAM+ GY Q G F +AL F RM + + +
Sbjct: 199 LITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPN 258
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
+ T+ VLSA + + G+ + V G+ + ++NAL+DMY K +G A ++F+
Sbjct: 259 QSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFD 318
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
ME+KD+ WN+++ + ++ L LF+ ML P+ VTF VLPAC+ L AL
Sbjct: 319 GMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDL 378
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+ +H YI N L G ++++V + +++ MY KCG + A+ VF M + +ASWN
Sbjct: 379 GKWVHAYIDKN-LKGTG---NVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWN 434
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G M+G + AL +F M +PD++TFVGVLSAC+ +GF+ G + M
Sbjct: 435 AMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKD 494
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
YG+ P ++HY C+ID+L R+G+ +EA L M E + +W +LL A R+HG + E
Sbjct: 495 YGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY 554
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
A+R+F+LEP + G YVL+SNIY G++++V IR + + ++K PGC+ IE+ +H
Sbjct: 555 VAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVH 614
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F+ D+ HP++++I+ L + L E G
Sbjct: 615 EFLVGDKFHPQSENIFRMLDEVDRLLEETG 644
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 349/657 (53%), Gaps = 82/657 (12%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM---KYALFVFNNLSCEP 97
L + +L + ++ H+ +LR + TSL++ Y+ + + +L + ++L P
Sbjct: 9 LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLP-HP 67
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+F+++++I F + L F+H+ L ++PD + P IK C + A+ +++H
Sbjct: 68 TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G D + S+L + YLKC + +A K+F+ +P RDVV+W+AM+ GY+++G
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSA----------------LIMMGFFKNGRVV---- 257
+A E+F M G+ + + G+L+ +++ GF+ +G V
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL 247
Query: 258 ---------------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
HG V+K G S V++A++DMYGK CV E +F+ +EE +I
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIG 307
Query: 303 S-----------------------------------WNSIMTVHEQCGNHDGTLRLFDRM 327
S W SI+ Q G L LF M
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G +P+ VT +++PAC +++ALMHG++IH + + G+ DDV++ +AL+D
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGI--------FDDVYVGSALID 419
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG ++ A+ F KMS ++ SWN ++ GY M G+ KE ++MF M ++ KPD VT
Sbjct: 420 MYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVT 479
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F VLSAC+ +G +G M +G+ P +EHY C++ +L R G+L EAY + M
Sbjct: 480 FTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEM 539
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E + VW LL++ R+H N L EIAA+++F LEP + GNY+L+SNIY + G ++E
Sbjct: 540 PFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEEN 599
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR M+ + +RKNPG SWIE+ +H ++ D+SHP+ K I +L L ++++ G
Sbjct: 600 RIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSG 656
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 212/486 (43%), Gaps = 81/486 (16%)
Query: 6 SRINPFSSCFNFSTSSGNQTFNHPFTLAT----CIASLQLCAHQTNLQKGQEIHSYMLRT 61
S I+ F+ +F + HP L ++++ CA L GQ++H++ +
Sbjct: 74 SLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAAS 133
Query: 62 GIIDSPLSITSLINMYSKCCQMKYALFVFNNL---------------------------- 93
G + + +SL +MY KC ++ A +F+ +
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF 193
Query: 94 ------SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
EPN+ ++N M++GF +N F + + F M G PD T C++ +
Sbjct: 194 GEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL 253
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL------------ 195
V+ ++HG V K GL D ++ SA+++ Y KC ++E +VF+E+
Sbjct: 254 EDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFL 313
Query: 196 -----------------PLRD------VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+D VV W +++ +Q G+ +ALE+FR M G+
Sbjct: 314 TGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVE 373
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ T+ ++ A + +G+ +H ++ G V V +ALIDMY K + A
Sbjct: 374 PNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRC 433
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ M ++ SWN++M + G T+ +F ML +G +PDLVTF+ VL AC+
Sbjct: 434 FDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQ---- 489
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVA 411
+G G+ N +++ + + + L+ + ++ G + +A + +M + D
Sbjct: 490 -NGLTEEGWRCYNSMSEEHGIEPKMEHYA--CLVTLLSRVGKLEEAYSIIKEMPFEPDAC 546
Query: 412 SWNIMI 417
W ++
Sbjct: 547 VWGALL 552
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 356/659 (54%), Gaps = 55/659 (8%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q F H L TCIA + +L G+ +HS +++ I S I +YSKC ++
Sbjct: 9 QRFRH--LLKTCIA-------ERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRL 59
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF--------------------------- 116
+A F ++S +PNVF++NA+I+ +
Sbjct: 60 AWARKAFQDIS-DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC 118
Query: 117 ----KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
L F+ MR++G+ D +T +I CCD + + + ++H + G D V +
Sbjct: 119 GETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVN 176
Query: 173 SALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL+ Y K +++A +VF + +RD V WN+M+ Y Q E KAL +F+ M + G+
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGL 236
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEAL 290
+ FT+ VL+A + G HG ++K G+ V + LID+Y K G + +
Sbjct: 237 NVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCR 296
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++FE + E D+ WN++++ + Q + L F +M G++P+ +F V+ ACS+L
Sbjct: 297 KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNL 356
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ G+QIH + + + N + ++NAL+ MY+KCG+++DA+ +F +M++ +
Sbjct: 357 SSPSQGKQIHSLALKSDIPSN-------RISVDNALIAMYSKCGNLQDARRLFDRMAEHN 409
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
S N MI GY G E+L +F M E ++ P +TF+ VLSAC+H+G + +G +
Sbjct: 410 TVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFN 469
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+M+ ++ + P EHY+C+ID+LGRAG+L+EA L MP + W +LL A R HGN
Sbjct: 470 MMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNI 529
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+LA AA +V QLEP + YV++SN+Y + G++EEV +R MR + V+K PGCSWIE+
Sbjct: 530 ELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGTLFDSDSTASGFEKHRL 646
K +H F++ D SHP K IY L ++ +++ G L D T G ++ RL
Sbjct: 590 KKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRL 648
>gi|414879964|tpg|DAA57095.1| TPA: hypothetical protein ZEAMMB73_812209 [Zea mays]
Length = 554
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/541 (40%), Positives = 332/541 (61%), Gaps = 19/541 (3%)
Query: 54 IHSYMLRTG-IIDSPLSITSLINMYSKC-CQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+H++++ +G + SP +ITSL+++Y++ + ++ + S P + +NA +S
Sbjct: 27 LHAHLVVSGRLAASPAAITSLVSLYARGPAALNSSIPLLLPASAPPPLPCFNAALS--LP 84
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ FA L F + + PD ++FP L + + +H L + GL D++
Sbjct: 85 HAFA---LPLFRRL-LVAHSPDAFSFPPLFS---SAPSSPHLLALHALALRFGLAHDLFC 137
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG- 230
SAL+ L+ + A ++F+EL RDVV+WN+MVNG+ ++G F +A E FR+M +EG
Sbjct: 138 ASALLRGCLRFGLADHAHRLFDELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREEGE 197
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +S FTVTG+LS +G VHG+ V+ G+D V NALID+YGK V +A
Sbjct: 198 VEISSFTVTGILSVCTATADLGSGAAVHGLSVRSGFDKEASVCNALIDLYGKCHQVHDAT 257
Query: 291 EIFEMMEE--KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+FE + + KD+FSWNS+++ H+ +H GT+ LF RM PD VT + VLPAC+
Sbjct: 258 MVFEGLPDTDKDLFSWNSMLSAHQYSADHAGTMCLFARMRRTTLLPDSVTVAAVLPACAQ 317
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
AAL GR +HGYIV +GLA +G+ DVF NAL DMYTK G + +A+ VF +
Sbjct: 318 TAALKVGRVVHGYIVTSGLACDGAL----DVFACNALADMYTKSGGLDEARCVFDWTRLR 373
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DVASWNIMI GY G+G+EAL +F M E L PDE+T +G LSACSHSG + +G+ FL
Sbjct: 374 DVASWNIMIDGYASHGRGREALMLFHQMIEEGLVPDEITLLGALSACSHSGLVEEGKGFL 433
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
M+ +G+ P +EHY CV DMLGRAG+L+EA ++ + + WRT LAA R+HG+
Sbjct: 434 MRMKEEFGLEPQLEHYACVTDMLGRAGRLDEARKV-IEEAGDVGAGAWRTYLAACRMHGD 492
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
+ A+ AA+ + E G +VL++N Y + G +EE+ ++R M++Q V+K GCSW+E
Sbjct: 493 KERAQQAARMLMMAEESGSGGWVLLANTYGSDGNFEELEEVREEMKRQGVQKAVGCSWVE 552
Query: 589 L 589
+
Sbjct: 553 V 553
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%), Gaps = 14/295 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T L +C +L G +H +R+G +LI++Y KC Q+ A VF L
Sbjct: 204 TVTGILSVCTATADLGSGAAVHGLSVRSGFDKEASVCNALIDLYGKCHQVHDATMVFEGL 263
Query: 94 -SCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ ++F++N+M+S YS D A + F MR+ +LPD T ++ C A+
Sbjct: 264 PDTDKDLFSWNSMLSAHQYSADHA-GTMCLFARMRRTTLLPDSVTVAAVLPACAQTAALK 322
Query: 152 EVKKIHGLVFKLGL----DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +HG + GL LDV+ +AL + Y K ++EA VF+ LRDV WN M+
Sbjct: 323 VGRVVHGYIVTSGLACDGALDVFACNALADMYTKSGGLDEARCVFDWTRLRDVASWNIMI 382
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+GYA G +AL +F +M +EG+ T+ G LSA G + G+ G +++M +
Sbjct: 383 DGYASHGRGREALMLFHQMIEEGLVPDEITLLGALSACSHSGLVEEGK---GFLMRMKEE 439
Query: 268 SGV-PVMN---ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
G+ P + + DM G+ + EA ++ E + +W + + G+ +
Sbjct: 440 FGLEPQLEHYACVTDMLGRAGRLDEARKVIEEAGDVGAGAWRTYLAACRMHGDKE 494
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 350/655 (53%), Gaps = 45/655 (6%)
Query: 27 NHPFTLATCIASLQLCAH---QTNLQKGQEIHSYMLRTGIIDS---PLSITSLINMYSKC 80
H + T ++ L C+H + G+E H++ L+ G +D +L++MY++
Sbjct: 164 RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARL 223
Query: 81 CQMKYALFVFNNLSC--EP---NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+ A +F + P +V T+N MIS + ++ M LGV PD
Sbjct: 224 GLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGV 283
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
TF + C + + +++H +V K L + ++ SALV+ Y + + A +VF+
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDM 343
Query: 195 LP--LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFF 251
+P R + +WNAM+ GYAQ G +ALE+F RM E G S T++GVL A F
Sbjct: 344 VPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF 403
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+HG VVK G V NAL+DMY + + A IF M++ +D+ SWN+++T
Sbjct: 404 AGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463
Query: 312 EQCGNHDGTLRLFDRML----------------SAGFQPDLVTFSTVLPACSHLAALMHG 355
G+ +L M + P+ +T T+LP C+ LAA G
Sbjct: 464 VVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARG 523
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
++IHGY V + L D+ + +AL+DMY KCG + ++ VF ++ +++V +WN+
Sbjct: 524 KEIHGYAVRHALES--------DIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNV 575
Query: 416 MILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+I+ YGM G G EA+ +F M + P+EVTF+ L+ACSHSG + +G E ME
Sbjct: 576 LIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERD 635
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM-PNEANPVVWRTLLAASRLHGNTDLAE 533
+GV PT + + CV+D+LGRAG+L+EAY + +M P E W +LL A RLH N +L E
Sbjct: 636 HGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGE 695
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+AA+R+F+LEPG +YVL+ NIY A G +++ + +R MR+Q V K PGCSWIEL +
Sbjct: 696 VAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAI 755
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG----DCCAGTLFDSDSTASGFEKH 644
H F++ + SHP + ++A + +L R+R G C D D A+ H
Sbjct: 756 HRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYH 810
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 87/239 (36%), Gaps = 73/239 (30%)
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSK--KDVASWNIMILGYGMDGQGKEALDMFSCM-C 437
+ NAL+ Y +CG + A +F + +D S+N +I + Q + ALD M
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161
Query: 438 EAKLKPDEVTFVGVLSACSH-------------------SGFLSQGREFLPLMESRYGVV 478
E + T V VL ACSH GFL +GRE P
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFP--------- 212
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQR 538
+ ++ M R G +++A L +RT AA
Sbjct: 213 -----FNALLSMYARLGLVDDAQSL------------FRTTAAA---------------- 239
Query: 539 VFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN--------PGCSWIEL 589
F G + M ++ V GG+ E +++ + M VR + P CS +E+
Sbjct: 240 -FSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEM 297
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/659 (32%), Positives = 356/659 (54%), Gaps = 55/659 (8%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q F H L TCIA + +L G+ +HS +++ I S I +YSKC ++
Sbjct: 9 QRFRH--LLKTCIA-------ERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRL 59
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF--------------------------- 116
+A F ++S +PNVF++NA+I+ +
Sbjct: 60 AWARKAFQDIS-DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADC 118
Query: 117 ----KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
L F+ MR++G+ D +T +I CCD + + + ++H + G D V +
Sbjct: 119 GETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVN 176
Query: 173 SALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL+ Y K +++A +VF + +RD V WN+M+ Y Q E KAL +F+ M + G+
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGL 236
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEAL 290
+ FT+ VL+A + G HG ++K G+ V + LID+Y K G + +
Sbjct: 237 NVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCR 296
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++FE + E D+ WN++++ + Q + L F +M G++P+ +F V+ ACS+L
Sbjct: 297 KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNL 356
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ G+QIH + + + N + ++NAL+ MY+KCG+++DA+ +F +M++ +
Sbjct: 357 SSPSQGKQIHSLALKSDIPSN-------RISVDNALIAMYSKCGNLQDARRLFDRMAEHN 409
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
S N MI GY G E+L +F M E ++ P +TF+ VLSAC+H+G + +G +
Sbjct: 410 TVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFN 469
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+M+ ++ + P EHY+C+ID+LGRAG+L+EA L MP + W +LL A R HGN
Sbjct: 470 MMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNI 529
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+LA AA +V QLEP + YV++SN+Y + G++EEV +R MR + V+K PGCSWIE+
Sbjct: 530 ELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGTLFDSDSTASGFEKHRL 646
K +H F++ D SHP K IY L ++ +++ G L D T G ++ RL
Sbjct: 590 KKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRL 648
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/622 (34%), Positives = 342/622 (54%), Gaps = 48/622 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ-----MKYALFVFNNL 93
L L ++ + ++IHS + TG+I +P+ +I CC+ M+YA VF+ +
Sbjct: 23 LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAF---CCKHELGDMEYARMVFDTM 79
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
PN F +N MI G+ + + M + GV+PD+YT+P L+K AV
Sbjct: 80 P-GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCG 138
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + KLG +V++ +AL++ Y + A VF+ DVV WN M++GY +
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRS 198
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+F +++++F M + + S T+ VLSA + G+ VH V + + +
Sbjct: 199 KQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLE 258
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH---------------- 317
NALIDMY + AL IF+ M+ +D+ SW +I+T G
Sbjct: 259 NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFV 318
Query: 318 ------DGTLR---------LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
DG L+ LF M +A +PD T ++L AC+HL AL G I YI
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
N + D F+ NAL+DMY CG++ A +F M +D SW +I G +
Sbjct: 379 DKNEIKI--------DSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAI 430
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+G G+EALDMFS M +A + PDEVT +GVL AC+HSG + +G++F M +++G+ P +
Sbjct: 431 NGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVA 490
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+LGRAG L EA+E+ MP + N +VW +LL A R+H + ++AE+AAQ++ +L
Sbjct: 491 HYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILEL 550
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP + YVL+ NIY A ++E++ ++R M + ++K PGCS IE+ +H F++ D+
Sbjct: 551 EPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQV 610
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HP++K IY++L ++ L+ G
Sbjct: 611 HPQSKEIYSKLDEMSVDLKFAG 632
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 185/428 (43%), Gaps = 51/428 (11%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C+ +L G+ +H Y+ I + +LI+MY+ C M AL +F+N+
Sbjct: 222 TLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNM 281
Query: 94 SCEPNVFTYNAMISGFYS----------------NDFA--------------FKG-LDFF 122
+V ++ A+++GF + DF FK L F
Sbjct: 282 KSR-DVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLF 340
Query: 123 NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
M+ + PD++T ++ C + A+ + I + K + +D ++G+AL++ Y C
Sbjct: 341 REMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNC 400
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+E+A+++F +P RD + W A++ G A G +AL++F +M K I T GVL
Sbjct: 401 GNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVL 460
Query: 243 SALIMMGFFKNGRVVHG-IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-D 300
A G G+ + + G + V ++D+ G+ + EA E+ + M K +
Sbjct: 461 CACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPN 520
Query: 301 IFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPD----LVTFSTVLPACSHLAALMHG 355
W S++ C H D + +P+ V + AC+ L
Sbjct: 521 SIVWGSLLGA---CRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEV 577
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
R++ ++ G+ K C I+ MN ++ + ++ +++K+ D S ++
Sbjct: 578 RKL---MMDRGIKKTPGCSLIE---MNGSVHEFVAGDQVHPQSKEIYSKL---DEMSVDL 628
Query: 416 MILGYGMD 423
GY D
Sbjct: 629 KFAGYSPD 636
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 341/595 (57%), Gaps = 22/595 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L +C +L+ G+ IH+ + +G+ L SLI+MY KC ++ +A VF + E
Sbjct: 47 ALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-EL 105
Query: 98 NVFTYNAMISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-CDVMAVLEV 153
+ ++N++I+G+ SND + L M + G+ + Y +K C + + +E
Sbjct: 106 DSVSWNSLIAGYVRIGSND---EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 162
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +HG KLGLDLDV +G+AL++TY K +E+A K+F+ +P +VV++NAM+ G+ Q
Sbjct: 163 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 222
Query: 213 I----GEF-HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ EF ++A+ +F M G+ S FT + +L A + F+ G+ +H + K
Sbjct: 223 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 282
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + NAL+++Y + + L+ F + D+ SW S++ H Q G +G L LF +
Sbjct: 283 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 342
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
L +G +PD T S +L AC++LAA+ G QIH Y + G+ + + N+ +
Sbjct: 343 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIG--------NFTIIQNSQIC 394
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A M F + D+ SW++MI G KEA+D+F M + + P+ +T
Sbjct: 395 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 454
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVL ACSH G + +G + +M+ +G+ P ++H C++D+LGRAG+L EA +
Sbjct: 455 FLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDS 514
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E +PV+WR+LL+A R+H TD + A+RV +LEP +YVL+ NIY G
Sbjct: 515 GFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 574
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+IR+ M+ + V+K PG SWIE+ + +H+F++ DRSHP ++ IY +L + +++
Sbjct: 575 EIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 629
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 241/500 (48%), Gaps = 42/500 (8%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++N++ISG+ F + ++ F R + DK+TF + C + + + IH
Sbjct: 5 NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 64
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L+ GL V + ++L++ Y KC ++ A VFE D V WN+++ GY +IG
Sbjct: 65 ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSAL--IMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ L + +M + G+ ++ + + L A + G+++HG VK+G D V V A
Sbjct: 125 EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTA 184
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM-------TVHEQCGNHDGTLRLFDRML 328
L+D Y K + +A +IF++M + ++ +N+++ T+ ++ N + LF M
Sbjct: 185 LLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE--AMYLFFEMQ 242
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S G +P TFS++L ACS + A G+QIH I L D F+ NAL+++
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQS--------DEFIGNALVEL 294
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+ GS+ D F K DV SW +I+G+ +GQ + L +F + + KPDE T
Sbjct: 295 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 354
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELA 504
+LSAC++ + G + Y + I ++T + I M + G ++ A
Sbjct: 355 SIMLSACANLAAVKSGEQI-----HAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA---N 406
Query: 505 LAMPNEANP--VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH--CGNYVLMSNIYVA- 559
+ NP V W +++++ HG A +F+L G N++ + VA
Sbjct: 407 MTFKETKNPDIVSWSVMISSNAQHGCAK----EAVDLFELMKGSGIAPNHITFLGVLVAC 462
Query: 560 --GGKYEEVLDIRHTMRQQN 577
GG EE L M++ +
Sbjct: 463 SHGGLVEEGLRYFEIMKKDH 482
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 140/269 (52%), Gaps = 15/269 (5%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R+VV WN++++GY Q+G +H+ + +F+ + + +FT + LS + G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R++H ++ G V + N+LIDMY K + A +FE +E D SWNS++ + +
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC-SHLAALMH-GRQIHGYIVVNGLAKNGS 372
G++D LRL +ML G + + L AC S+ ++ + G+ +HG V GL
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL----- 175
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY-----GMDGQGK 427
D+ DV + AL+D Y K G + DA +F M +V +N MI G+ D
Sbjct: 176 --DL-DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFAN 232
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACS 456
EA+ +F M +KP E TF +L ACS
Sbjct: 233 EAMYLFFEMQSRGMKPSEFTFSSILKACS 261
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 12/229 (5%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M ++++ SWNS+++ + Q G + + LF + + D TFS L C L G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
R IH I V+GL V + N+L+DMY KCG + A++VF + D SWN
Sbjct: 61 RLIHALITVSGLG--------GPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 112
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS--QGREFLPLMES 473
+I GY G E L + M L + L AC S F S + + L
Sbjct: 113 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACG-SNFSSSIECGKMLHGCAV 171
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G+ + T ++D + G L +A ++ MP + N V++ ++A
Sbjct: 172 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/666 (33%), Positives = 355/666 (53%), Gaps = 74/666 (11%)
Query: 25 TFNHPFT--LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
T + PF L +CI L+L A +H+ ++++G + LI+ Y+KC
Sbjct: 17 TVSSPFAKLLDSCI-KLKLSAIDVRC-----VHASVIKSGFSNEVFIQNRLIDAYAKCGS 70
Query: 83 MKYALFVFNNLSCEPNVFTYNA-------------------------------MISGFYS 111
++ +F+ + + NVFT+N+ M+SGF
Sbjct: 71 LEDGRQLFDKMP-QRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQ 129
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+D + L +F M + G + ++YTF + C + + +IH L+ K DVYI
Sbjct: 130 HDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYI 189
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
GSALV+ Y KC + +A +VF+E+ R+VV WN+++ Y Q G +AL+VF+ M + +
Sbjct: 190 GSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWV 249
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEAL 290
T+ V+SA + K G+ VH VVKM + + + NA +DMY K + EA
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 291 EIFE-------------------------------MMEEKDIFSWNSIMTVHEQCGNHDG 319
IF+ M E+++ SWN+++ + Q G ++
Sbjct: 310 FIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF + P TF+ +L AC+ LA L G Q H +++ +G + DD+
Sbjct: 370 ALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSG--EEDDI 427
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ N+L+DMY KCG + + +VF KM ++D SWN MI+G+ +G G EAL++F M ++
Sbjct: 428 FVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDS 487
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
KPD +T +GVLSAC H+GF+ +GR + M +GV P +HYTC++D+LGRAG L E
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A + MP + + V+W +LLAA ++H N L + A+++F++E + G YVL+SN+Y
Sbjct: 548 AKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAE 607
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
GK+ + +++R MR++ V K PGCSWI++ H F+ D+SHP K I++ L L A
Sbjct: 608 LGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAE 667
Query: 620 LREHGD 625
+R+ D
Sbjct: 668 MRQKQD 673
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 317/578 (54%), Gaps = 35/578 (6%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S +L++ ++ + AL +F + +P+ +YNA+++ + L F M
Sbjct: 82 FSYNALLSACARLGRADDALALFGAIP-DPDQCSYNAVVAALAQHGRGGDALRFLAAMHA 140
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ + Y+F + C A +++H LV K DVYIG+ALV+ Y KC+ EE
Sbjct: 141 DDFVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEE 200
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A KVF+ +P R++V WN+++ Y Q G +AL +F RM K+G T+ V+SA
Sbjct: 201 AQKVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAG 260
Query: 248 MGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGK------GKCV-------------- 286
+ + GR VH +VK + + + NAL+DMY K KCV
Sbjct: 261 LAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETS 320
Query: 287 -----------GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
G+A +F M EK++ +WN ++ + + LRLF R+ P
Sbjct: 321 MITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPT 380
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T+ VL AC++LA L G+Q H +++ G + + DVF+ N+L+DMY K GS+
Sbjct: 381 HYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPES--DVFVGNSLVDMYLKTGSI 438
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D VF +M+ +D SWN MI+GY +G+ K+AL +F M + +PD VT +GVLSAC
Sbjct: 439 SDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSAC 498
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
HSG + +GR + M +G++PT +HYTC+ID+LGRAG L E EL MP E + V+
Sbjct: 499 GHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL 558
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LL A RLH N D+ E AA ++F+L+P + G YVL+SN+Y GK+ +V +R +M+
Sbjct: 559 WASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKH 618
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
+ V K PGCSWIE+ ++ F++ D HP I+ L
Sbjct: 619 RGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTL 656
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDS-PLSI----TSLINMYSKCCQMKYALFVFNN 92
L CA+ NLQ GQ+ H ++L+ G DS P S SL++MY K + VF
Sbjct: 388 LNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFER 447
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ NV ++NAMI G+ N A L F M PD T ++ C V E
Sbjct: 448 MAARDNV-SWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKE 506
Query: 153 VKKI-------HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
++ HG++ D Y + +++ + ++E ++ E +P+ D VLW
Sbjct: 507 GRRYFQSMTEDHGIIPT----RDHY--TCMIDLLGRAGHLKEVEELIENMPMEPDAVLWA 560
Query: 205 AMV 207
+++
Sbjct: 561 SLL 563
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F + +T+L A + L +L R+ V +G+ + F NAL+ +
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARR-----VFDGMPHR-------NTFSYNALLSACAR 93
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G DA +F + D S+N ++ G+G +AL + M + +F
Sbjct: 94 LGRADDALALFGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASA 153
Query: 452 LSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
LSAC+ G + L+ +S +G I T ++DM + + EA ++ AMP E
Sbjct: 154 LSACASEKASRTGEQVHALVTKSSHGSDVYIG--TALVDMYAKCERPEEAQKVFDAMP-E 210
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
N V W +L+ +G D E A V ++ G + V ++++ A
Sbjct: 211 RNIVSWNSLITCYEQNGPVD--EALALFVRMMKDGFVPDEVTLASVMSA 257
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 319/600 (53%), Gaps = 17/600 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLA+ + + C+ L +GQ++H+Y + G + +L+N+Y+KC ++ AL F
Sbjct: 351 TLASLVVA---CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
E NV +N M+ + D F M+ ++P++YT+P ++K C + +
Sbjct: 408 LETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 466
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH + K L+ Y+ S L++ Y K ++ A + +DVV W M+ GY
Sbjct: 467 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 526
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL FR+M GI +T +SA + K G+ +H G+ S +
Sbjct: 527 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 586
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
P NAL+ +Y + + E+ FE E D +WN++++ +Q GN++ LR+F RM
Sbjct: 587 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 646
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-AKNGSCKDIDDVFMNNALMDMY 389
G + TF + + A S A + G+Q+H I G ++ C NAL+ MY
Sbjct: 647 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC---------NALISMY 697
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ DA+ F ++S K+ SWN +I Y G G EALD F M + ++P+ VT V
Sbjct: 698 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 757
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSACSH G + +G + M S YG+ P EHY CV+DML RAG L+ A E MP
Sbjct: 758 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 817
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + +VWRTLL+A +H N ++ E AA + +LEP YVL+SN+Y K++
Sbjct: 818 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 877
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M+++ V+K PG SWIE+K+ +H+F D++HP A I+ LT R E G DC
Sbjct: 878 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC 937
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 240/499 (48%), Gaps = 14/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C +L+ G+++H +L+ G +L+++Y + A
Sbjct: 248 PYAFSSVLSA---CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 304
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+S + + TYN +I+G + K ++ F M G+ PD T L+ C
Sbjct: 305 IFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 363
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLG + I AL+N Y KC +E AL F E + +VVLWN M+
Sbjct: 364 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + + + +FR+M E I +++T +L I +G + G +H ++K +
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + LIDMY K + A +I KD+ SW +++ + Q D L F +ML
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + D V + + AC+ L AL G+QIH V+G + D+ NAL+ +
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS--------DLPFQNALVTL 595
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y++CG + ++ + F + D +WN ++ G+ G +EAL +F M + + TF
Sbjct: 596 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ A S + + QG++ ++ ++ G E +I M + G +++A + L +
Sbjct: 656 GSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 714
Query: 509 NEANPVVWRTLLAASRLHG 527
+ N V W ++ A HG
Sbjct: 715 TK-NEVSWNAIINAYSKHG 732
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 15/489 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ +L G+ DS + LI++YS+ + A VF+ L + + ++ AMISG
Sbjct: 167 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVAMISGLSK 225
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N+ + + F M LG++P Y F ++ C + ++ +++HGLV KLG D Y+
Sbjct: 226 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 285
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV+ Y + A +F + RD V +N ++NG +Q G KA+E+F+RM +G+
Sbjct: 286 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 345
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ ++ A G G+ +H K+G+ S + AL+++Y K + AL+
Sbjct: 346 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 405
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E +++ WN ++ + + + R+F +M P+ T+ ++L C L
Sbjct: 406 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 465
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH I+ N ++ + L+DMY K G + A + + + KDV
Sbjct: 466 LELGEQIHSQIIKTNFQLNA--------YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 517
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY +AL F M + ++ DEV +SAC+ L +G++ +
Sbjct: 518 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQ 576
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + ++ + R G++ E+Y LA + + W L++ + GN +
Sbjct: 577 ACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNE- 634
Query: 532 AEIAAQRVF 540
A RVF
Sbjct: 635 ---EALRVF 640
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 238/480 (49%), Gaps = 18/480 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +G+++HS +L+ G+ + L + Y + A VF+ + E +FT+N MI
Sbjct: 60 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-ERTIFTWNKMI 118
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGL 165
S + + F M V P++ TF +++ C +V ++IH + GL
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ + L++ Y + F++ A +VF+ L L+D W AM++G ++ +A+ +F
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M GI + + + VLSA + + G +HG+V+K+G+ S V NAL+ +Y
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 298
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A IF M ++D ++N+++ QCG + + LF RM G +PD T ++++ A
Sbjct: 299 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 358
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L G+Q+H Y G A N + AL+++Y KC + A F +
Sbjct: 359 CSADGTLFRGQQLHAYTTKLGFASNNK--------IEGALLNLYAKCADIETALDYFLET 410
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V WN+M++ YG+ + + +F M ++ P++ T+ +L C G L G
Sbjct: 411 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470
Query: 466 EF-LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++++ + + Y C +IDM + G+L+ A+++ + + + V W T++A
Sbjct: 471 QIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 525
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 11/225 (4%)
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY-GKGKCVGEALEIFEMMEEKDIFSWNSI 307
G GR +H ++K+G DS + L D Y KG G A ++F+ M E+ IF+WN +
Sbjct: 59 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG-AFKVFDEMPERTIFTWNKM 117
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC-SHLAALMHGRQIHGYIVVNG 366
+ LF RM+S P+ TFS VL AC A QIH I+ G
Sbjct: 118 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 177
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L D + N L+D+Y++ G + A+ VF + KD +SW MI G +
Sbjct: 178 LR--------DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 229
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
EA+ +F M + P F VLSAC L G + L+
Sbjct: 230 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 274
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 329/577 (57%), Gaps = 17/577 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYS--KCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
++IH+ MLRTG+ P + + ++ S + ++YA VF+ + P +T N++I G
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIP-NPTSYTCNSIIRGC 63
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + L F+ M G++PD+YTFP L K C + E K+IH KLG D
Sbjct: 64 TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDT 120
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK- 228
Y + L+N Y C + A KVF+++ + VV W M+ +AQ + ++A+ +F RM K
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
E + + T+ VL+A + +H + + G+ V + L+D+Y K CV
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A ++F+ +EK++FSWN ++ H + N++ L LF M + G + D VT +++L AC+H
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L AL G+ +H YI + ID DV + AL+DMY KCGS+ A VF +M +
Sbjct: 301 LGALELGKWLHAYI---------KKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPE 351
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KDV +W +ILG M GQ + AL F M +KPD +TFVGVL+ACSH+GF+ +G
Sbjct: 352 KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISH 411
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M YG+ PTIEHY ++D+LGRAG++ EA EL +MP + V LL A R+HG
Sbjct: 412 FNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHG 471
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N + AE AA+++ +++P H G YVL+SNIY + K+EE R M ++ +RK PGCS I
Sbjct: 472 NLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQI 531
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ +H F+ D SH ++ I L + ++L+ G
Sbjct: 532 EVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAG 568
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 155/303 (51%), Gaps = 2/303 (0%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
N +G++IH + + G + +L+NMYS C + A VF+ + + V ++ MI
Sbjct: 100 NSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKME-DKTVVSWATMI 158
Query: 107 SGFYSNDFAFKGLDFFNH-MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
D + + F+ M+ V P++ T ++ C + VK+IH + + G
Sbjct: 159 GVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGF 218
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
V + + L++ Y KC ++ A +F++ +++ WN M+NG+ + + +AL +FR
Sbjct: 219 GRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFRE 278
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M +GI + T+ +L A +G + G+ +H + K D V + AL+DMY K
Sbjct: 279 MQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGS 338
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A+++F M EKD+ +W +++ CG + L+ FD M G +PD +TF VL A
Sbjct: 339 IETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398
Query: 346 CSH 348
CSH
Sbjct: 399 CSH 401
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 4/265 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +L + IH Y+ G + T L+++Y KC ++ A +F+
Sbjct: 189 TLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKA 248
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N+F++N MI+G + + L F M+ G+ DK T L+ C + A+
Sbjct: 249 Q-EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELG 307
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + K +D+DV +G+ALV+ Y KC +E A++VF E+P +DV+ W A++ G A
Sbjct: 308 KWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMC 367
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH--GIVVKMGYDSGVP 271
G+ AL+ F M +G+ T GVL+A GF G + H + G +
Sbjct: 368 GQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEG-ISHFNSMSDTYGIQPTIE 426
Query: 272 VMNALIDMYGKGKCVGEALEIFEMM 296
L+D+ G+ + EA E+ + M
Sbjct: 427 HYGGLVDILGRAGRIAEAEELIKSM 451
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 341/635 (53%), Gaps = 56/635 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP- 97
L+ C + + G +H+ + +G + L++MY +C + A VF+ +
Sbjct: 152 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 211
Query: 98 -NVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
++ ++N++++ + + + + F M + LG+ PD + ++ C V A K+
Sbjct: 212 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 271
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG + GL DV++G+A+V+ Y KC MEEA KVFE + ++DVV WNAMV GY+QIG
Sbjct: 272 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 331
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF-------FKN--------------- 253
F AL +F ++ +E I ++ T + V++ G F+
Sbjct: 332 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVS 391
Query: 254 --------GRVVHG-------IVVKMGYDSGVP-----VMNALIDMYGKGKCVGEALEIF 293
G ++HG I + D P V+NALIDMY K K A +F
Sbjct: 392 LLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 451
Query: 294 EMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACSHL 349
+++ KD + +W ++ + Q G + L LF +ML P+ T S L AC+ L
Sbjct: 452 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 511
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL GRQIH Y++ N + +F+ N L+DMY+K G + A++VF M +++
Sbjct: 512 GALRFGRQIHAYVLRNRF-------ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 564
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SW ++ GYGM G+G+EAL +F M + L PD VTFV VL ACSHSG + QG +
Sbjct: 565 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFN 624
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M +GVVP EHY C++D+L RAG+L+EA EL MP + P VW LL+A R++ N
Sbjct: 625 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 684
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+L E AA ++ +LE G+ G+Y L+SNIY +++V IR+ M+ ++K PGCSW++
Sbjct: 685 ELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 744
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ G TF + D SHP ++ IY L L R++ G
Sbjct: 745 RKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALG 779
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 170/584 (29%), Positives = 279/584 (47%), Gaps = 71/584 (12%)
Query: 1 MLSKISRINP-----FSSCFNFSTSSGNQTFNHP-FTLATCIASLQLCAHQTNLQKGQEI 54
ML + R+ P F + F FST+S F +AS +L
Sbjct: 20 MLISLPRLKPKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAEL------------T 67
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSND 113
H +L G+ P T +I+MY AL V L VF +N +I
Sbjct: 68 HQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLG 124
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
F L + M++LG PD YTFP ++K C ++ + +H +VF G + +V++G+
Sbjct: 125 FLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGN 184
Query: 174 ALVNTYLKCQFMEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMSKE- 229
LV+ Y +C E A +VF+E+ R D+V WN++V Y Q G+ +A+++F RM+++
Sbjct: 185 GLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDL 244
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
GI ++ VL A +G + G+ VHG ++ G V V NA++DMY K + EA
Sbjct: 245 GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEA 304
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR----------------------- 326
++FE M+ KD+ SWN+++T + Q G D L LF++
Sbjct: 305 NKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQR 364
Query: 327 ------------MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV--VNGLAKNGS 372
ML G +P++VT ++L C+ L+HG++ H + + + L +N
Sbjct: 365 GLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDP 424
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMDGQGKEAL 430
DD+ + NAL+DMY+KC S + A+ +F + KD V +W ++I G G+ EAL
Sbjct: 425 G---DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEAL 481
Query: 431 DMFSCMCEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
++FS M + + P+ T L AC+ G L GR+ + + C+I
Sbjct: 482 ELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLI 541
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
DM ++G ++ A + M ++ N V W +L+ +HG + A
Sbjct: 542 DMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEA 584
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 12/280 (4%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGII-------DSPLSITSLINMYSKCCQMK 84
+ T ++ L CA L G+E H + ++ + D + I +LI+MYSKC K
Sbjct: 386 VVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPK 445
Query: 85 YALFVFNNLSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLI 141
A +F+ + + +V T+ +I G + A + L+ F+ M Q V+P+ +T C +
Sbjct: 446 AARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCAL 505
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
C + A+ ++IH V + + +++ + L++ Y K ++ A VF+ + R+
Sbjct: 506 MACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNG 565
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHG 259
V W +++ GY G +AL++F M K + T VL A G G +G
Sbjct: 566 VSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNG 625
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ G G ++D+ + + EA+E+ M K
Sbjct: 626 MNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 665
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 99/191 (51%), Gaps = 9/191 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNN 92
T +L CA L+ G++IH+Y+LR + L + + LI+MYSK + A VF+N
Sbjct: 500 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 559
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + N ++ ++++G+ + + L F M+++ ++PD TF ++ C V +
Sbjct: 560 MH-QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQ 618
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAMVNG- 209
+ +G+ G+ + +V+ + ++EA+++ +P++ +W A+++
Sbjct: 619 GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 678
Query: 210 --YA--QIGEF 216
YA ++GE+
Sbjct: 679 RVYANVELGEY 689
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/635 (34%), Positives = 340/635 (53%), Gaps = 56/635 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP- 97
L+ C + + G +H+ + +G + L++MY +C + A VF+ +
Sbjct: 133 LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGV 192
Query: 98 -NVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
++ ++N++++ + + + + F M + LG+ PD + ++ C V A K+
Sbjct: 193 GDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQ 252
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG + GL DV++G+A+V+ Y KC MEEA KVFE + ++DVV WNAMV GY+QIG
Sbjct: 253 VHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGR 312
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGV---------------------------------- 241
F AL +F ++ +E I ++ T + V
Sbjct: 313 FDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVS 372
Query: 242 -LSALIMMGFFKNGRVVHGIVVK--MGYDSGVP-----VMNALIDMYGKGKCVGEALEIF 293
LS + G +G+ H +K + D P V+NALIDMY K K A +F
Sbjct: 373 LLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMF 432
Query: 294 EMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACSHL 349
+++ KD + +W ++ + Q G + L LF +ML P+ T S L AC+ L
Sbjct: 433 DLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARL 492
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL GRQIH Y++ N + +F+ N L+DMY+K G + A++VF M +++
Sbjct: 493 GALRFGRQIHAYVLRNRF-------ESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 545
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SW ++ GYGM G+G+EAL +F M + L PD VTFV VL ACSHSG + QG +
Sbjct: 546 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFN 605
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M +GVVP EHY C++D+L RAG+L+EA EL MP + P VW LL+A R++ N
Sbjct: 606 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANV 665
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+L E AA ++ +LE G+ G+Y L+SNIY +++V IR+ M+ ++K PGCSW++
Sbjct: 666 ELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 725
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ G TF + D SHP ++ IY L L R++ G
Sbjct: 726 RKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALG 760
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 169/583 (28%), Positives = 280/583 (48%), Gaps = 69/583 (11%)
Query: 1 MLSKISRINP-----FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIH 55
ML + R+ P F + F FST+S +T + L +L + IH
Sbjct: 1 MLISLPRLKPKPPLLFLTTFFFSTAS-----------STTDLTSTLFHQCKSLASAELIH 49
Query: 56 SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSNDF 114
+L G+ P T +I+MY AL V L VF +N +I F
Sbjct: 50 QQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGF 106
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
L + M++LG PD YTFP ++K C ++ + +H +VF G + +V++G+
Sbjct: 107 LEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNG 166
Query: 175 LVNTYLKCQFMEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-G 230
LV+ Y +C E A +VF+E+ R D+V WN++V Y Q G+ +A+++F RM+++ G
Sbjct: 167 LVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLG 226
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I ++ VL A +G + G+ VHG ++ G V V NA++DMY K + EA
Sbjct: 227 IRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEAN 286
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR------------------------ 326
++FE M+ KD+ SWN+++T + Q G D L LF++
Sbjct: 287 KVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRG 346
Query: 327 -----------MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV--VNGLAKNGSC 373
M G +P++VT ++L C+ L+HG++ H + + + L +N
Sbjct: 347 LGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPG 406
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMDGQGKEALD 431
DD+ + NAL+DMY+KC S + A+ +F + KD V +W ++I G G+ EAL+
Sbjct: 407 ---DDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 463
Query: 432 MFSCMCEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+FS M + + P+ T L AC+ G L GR+ + + C+ID
Sbjct: 464 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
M ++G ++ A + M ++ N V W +L+ +HG + A
Sbjct: 524 MYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEA 565
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 12/281 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII-------DSPLSITSLINMYSKCCQM 83
+ T ++ L CA L G+E H + ++ + D + I +LI+MYSKC
Sbjct: 366 NVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSP 425
Query: 84 KYALFVFNNLSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCL 140
K A +F+ + + +V T+ +I G + A + L+ F+ M Q V+P+ +T C
Sbjct: 426 KAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCA 485
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+ C + A+ ++IH V + + +++ + L++ Y K ++ A VF+ + R+
Sbjct: 486 LMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRN 545
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVH 258
V W +++ GY G +AL++F M K G+ T VL A G G +
Sbjct: 546 GVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFN 605
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
G+ G G ++D+ + + EA+E+ M K
Sbjct: 606 GMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMK 646
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNN 92
T +L CA L+ G++IH+Y+LR + L + + LI+MYSK + A VF+N
Sbjct: 481 TISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDN 540
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + N ++ ++++G+ + + L F M+++G++PD TF ++ C V +
Sbjct: 541 MH-QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQ 599
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAMVNG- 209
+ +G+ G+ + +V+ + ++EA+++ +P++ +W A+++
Sbjct: 600 GINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSAC 659
Query: 210 --YA--QIGEF 216
YA ++GE+
Sbjct: 660 RVYANVELGEY 670
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/619 (34%), Positives = 345/619 (55%), Gaps = 38/619 (6%)
Query: 34 TCIASLQLCAH-QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ C+H + ++ G+++H+Y LR G + + + +L+ MY++ ++ A +F
Sbjct: 435 TLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRT-YTNNALVTMYARLGRVNDAKALFGV 493
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ ++ ++N +IS ND + L + M GV PD T ++ C + +
Sbjct: 494 FDGK-DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRI 552
Query: 153 VKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IH + G L + ++G+ALV+ Y C+ ++ VF+ + R V +WNA++ GYA
Sbjct: 553 GREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYA 612
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTV-TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ +AL +F M E + T VL A + F + +HG +VK G+
Sbjct: 613 RNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDK 672
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-- 328
V NAL+DMY + V + IF M ++DI SWN+++T CG +D L L M
Sbjct: 673 YVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRR 732
Query: 329 ----------------SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
F+P+ VT TVLP C+ LAAL G++IH Y V LA
Sbjct: 733 QGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAM--- 789
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DV + +AL+DMY KCG + A VF +M ++V +WN++I+ YGM G+G+EAL++
Sbjct: 790 -----DVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALEL 844
Query: 433 FSCMCEAK------LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
F M ++P+EVT++ + +ACSHSG + +G M++ +GV P +HY C
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
++D+LGR+G++ EAYEL MP+ N V W +LL A R+H + + EIAA+ +F LEP
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPN 964
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+YVLMSNIY + G +++ L +R M++ VRK PGCSWIE D +H F+S D SHP+
Sbjct: 965 VASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQ 1024
Query: 606 AKSIYAELHSLTARLREHG 624
+K ++ L +L+ R+R+ G
Sbjct: 1025 SKELHEYLETLSQRMRKEG 1043
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 244/520 (46%), Gaps = 37/520 (7%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT---SLINMYSKCCQMKYALFVFNNL 93
A L+ A +L G++IH+++ + G P S+ SL+NMY KC + A VF+++
Sbjct: 335 AVLKAAAAVHDLCLGKQIHAHVFKFGHA-PPSSVAVANSLVNMYGKCGDLTAARQVFDDI 393
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N+MI+ + L F M V P +T + C V + +
Sbjct: 394 PDRDHV-SWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRL 452
Query: 154 -KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G DL Y +ALV Y + + +A +F +D+V WN +++ +Q
Sbjct: 453 GKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQ 511
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
F +AL M +G+ T+ VL A + + GR +H ++ G
Sbjct: 512 NDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSF 571
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-A 330
V AL+DMY K + +F+ + + + WN+++ + + D LRLF M+S +
Sbjct: 572 VGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISES 631
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
F P+ TF++VLPAC IHGYIV G K D ++ NALMDMY+
Sbjct: 632 EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGK--------DKYVQNALMDMYS 683
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---------- 440
+ G + ++ +F +M+K+D+ SWN MI G + G+ +AL++ M +
Sbjct: 684 RMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVD 743
Query: 441 --------LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
KP+ VT + VL C+ L +G+E + + + + + ++DM
Sbjct: 744 YEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKE-IHAYAVKQKLAMDVAVGSALVDMYA 802
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ G LN A + MP N + W L+ A +HG + A
Sbjct: 803 KCGCLNLASRVFDQMPIR-NVITWNVLIMAYGMHGKGEEA 841
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 202/405 (49%), Gaps = 16/405 (3%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG--LDLDVYIGSALVNTYLKCQFMEEALK 190
D + FP ++K V + K+IH VFK G V + ++LVN Y KC + A +
Sbjct: 329 DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQ 388
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI-MMG 249
VF+++P RD V WN+M+ + E+ +L +FR M E + + FT+ V A + G
Sbjct: 389 VFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG 448
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ G+ VH ++ G D NAL+ MY + V +A +F + + KD+ SWN++++
Sbjct: 449 GVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVIS 507
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q + L M+ G +PD VT ++VLPACS L L GR+IH Y + NG
Sbjct: 508 SLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG--- 564
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
I++ F+ AL+DMY C + ++VF + ++ VA WN ++ GY + +A
Sbjct: 565 ----DLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQA 620
Query: 430 LDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR-YGVVPTIEHYTCV 487
L +F M E++ P+ TF VL AC S + R +G +++ +
Sbjct: 621 LRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQN--AL 678
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+DM R G++ E + N+ + V W T++ + G D A
Sbjct: 679 MDMYSRMGRV-EISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R W ++ F A+ + M F VL A + G+ +
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352
Query: 258 HGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
H V K G+ S V V N+L++MYGK + A ++F+ + ++D SWNS++ +
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL-AALMHGRQIHGYIVVNGLAKNGSCK 374
+ +L LF MLS P T +V ACSH+ + G+Q+H Y + NG +
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR----- 467
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ NNAL+ MY + G + DA+ +F KD+ SWN +I + + +EAL
Sbjct: 468 ----TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVY 523
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
M ++PD VT VL ACS L GRE
Sbjct: 524 LMIVDGVRPDGVTLASVLPACSQLERLRIGREI 556
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 10/228 (4%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+E + W ++ + + + ML+A PD F VL A + + L G
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+QIH ++ G A S V + N+L++MY KCG + A+ VF + +D SWN
Sbjct: 350 KQIHAHVFKFGHAPPSS------VAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNS 403
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH-SGFLSQGREFLPLMESR 474
MI + + +L +F M + P T V V ACSH G + G++ + R
Sbjct: 404 MIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQ-VHAYTLR 462
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G + T + ++ M R G++N+A L + + + V W T++++
Sbjct: 463 NGDLRTYTN-NALVTMYARLGRVNDAKAL-FGVFDGKDLVSWNTVISS 508
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 341/595 (57%), Gaps = 22/595 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L +C +L+ G+ IH+ + +G+ L SLI+MY KC ++ +A VF + E
Sbjct: 126 ALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-EL 184
Query: 98 NVFTYNAMISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-CDVMAVLEV 153
+ ++N++I+G+ SND + L M + G+ + Y +K C + + +E
Sbjct: 185 DSVSWNSLIAGYVRIGSND---EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIEC 241
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +HG KLGLDLDV +G+AL++TY K +E+A K+F+ +P +VV++NAM+ G+ Q
Sbjct: 242 GKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQ 301
Query: 213 I----GEF-HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ EF ++A+ +F M G+ S FT + +L A + F+ G+ +H + K
Sbjct: 302 METMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQ 361
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + NAL+++Y + + L+ F + D+ SW S++ H Q G +G L LF +
Sbjct: 362 SDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHEL 421
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
L +G +PD T S +L AC++LAA+ G QIH Y + G+ + + N+ +
Sbjct: 422 LFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIG--------NFTIIQNSQIC 473
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A M F + D+ SW++MI G KEA+D+F M + + P+ +T
Sbjct: 474 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 533
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVL ACSH G + +G + +M+ +G+ P ++H C++D+LGRAG+L EA +
Sbjct: 534 FLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDS 593
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E +PV+WR+LL+A R+H TD + A+RV +LEP +YVL+ NIY G
Sbjct: 594 GFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 653
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+IR+ M+ + V+K PG SWIE+ + +H+F++ DRSHP ++ IY +L + +++
Sbjct: 654 EIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKK 708
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/569 (27%), Positives = 270/569 (47%), Gaps = 43/569 (7%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T +Q +L G+ H +M++T + +L+ MY KC + A
Sbjct: 16 PLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKK 75
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + NV ++N++ISG+ F + ++ F R + DK+TF + C +
Sbjct: 76 LFDRMP-KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL 134
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + IH L+ GL V + ++L++ Y KC ++ A VFE D V WN+++
Sbjct: 135 DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA 194
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL--IMMGFFKNGRVVHGIVVKMGY 266
GY +IG + L + +M + G+ ++ + + L A + G+++HG VK+G
Sbjct: 195 GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 254
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM-------TVHEQCGNHDG 319
D V V AL+D Y K + +A +IF++M + ++ +N+++ T+ ++ N
Sbjct: 255 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANE-- 312
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ LF M S G +P TFS++L ACS + A G+QIH I L D
Sbjct: 313 AMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQS--------DE 364
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ NAL+++Y+ GS+ D F K DV SW +I+G+ +GQ + L +F + +
Sbjct: 365 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 424
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAG 495
KPDE T +LSAC++ + G + Y + I ++T + I M + G
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQI-----HAYAIKTGIGNFTIIQNSQICMYAKCG 479
Query: 496 QLNEAYELALAMPNEANP--VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH--CGNYV 551
++ A + NP V W +++++ HG A +F+L G N++
Sbjct: 480 DIDSA---NMTFKETKNPDIVSWSVMISSNAQHGCAK----EAVDLFELMKGSGIAPNHI 532
Query: 552 LMSNIYVA---GGKYEEVLDIRHTMRQQN 577
+ VA GG EE L M++ +
Sbjct: 533 TFLGVLVACSHGGLVEEGLRYFEIMKKDH 561
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 171/336 (50%), Gaps = 15/336 (4%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
LG+ D T+ L++C +++ K H + K +++ + L+ Y KC +
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A K+F+ +P R+VV WN++++GY Q+G +H+ + +F+ + + +FT + LS
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ GR++H ++ G V + N+LIDMY K + A +FE +E D SWNS+
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC--SHLAALMHGRQIHGYIVVN 365
+ + + G++D LRL +ML G + + L AC + +++ G+ +HG V
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKL 252
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY----- 420
GL D+ DV + AL+D Y K G + DA +F M +V +N MI G+
Sbjct: 253 GL-------DL-DVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMET 304
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D EA+ +F M +KP E TF +L ACS
Sbjct: 305 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACS 340
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/602 (34%), Positives = 331/602 (54%), Gaps = 48/602 (7%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM----KYALFVFNNLSCEPNVFTYN 103
+K + S M +G+ ++ ++I+ Y++ Q KY L + +PNV ++
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWT 331
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
A+I+G N + F+ L F M GV P+ T + C ++ + ++IHG K+
Sbjct: 332 ALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKV 391
Query: 164 G-LDLDVYIGSALVNTYLKCQFME-------------------------------EALKV 191
LD D+ +G++LV+ Y KC+ +E EA+++
Sbjct: 392 EELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIEL 451
Query: 192 FEELPLR----DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
E+ + D++ WN +V G+ Q G+ ALE F+RM G+ + T++G L+A
Sbjct: 452 LSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQ 511
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ K G+ +HG V++ + V +ALI MY + A +F + +D+ WNSI
Sbjct: 512 VRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSI 571
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
++ Q G L L M + + + VT + LPACS LAAL G++IH +I+ GL
Sbjct: 572 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL 631
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+C F+ N+L+DMY +CGS++ ++ +F M ++D+ SWN+MI YGM G G
Sbjct: 632 ---DTCN-----FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 683
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+A+++F LKP+ +TF +LSACSHSG + +G ++ +M++ Y + P +E Y C+
Sbjct: 684 DAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 743
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+D+L RAGQ NE E MP E N VW +LL A R+H N DLAE AA+ +F+LEP
Sbjct: 744 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSS 803
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
GNYVLM+NIY A G++E+ IR M+++ V K PGCSWIE+K LH+F+ D SHP +
Sbjct: 804 GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLME 863
Query: 608 SI 609
I
Sbjct: 864 QI 865
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 265/579 (45%), Gaps = 68/579 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C NL+ G ++H+ ++ G+ + L+ +Y + ++ A +F+ +S E N
Sbjct: 96 LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS-ERN 154
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF++ A++ + + + F M GV PD + FP + K C ++ K ++
Sbjct: 155 VFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYD 214
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +G + + + ++++ ++KC M+ A + FEE+ +DV +WN MV+GY GEF K
Sbjct: 215 YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKK 274
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL+ M G+ + T ++S G F+ ++
Sbjct: 275 ALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEAS------------------KYFLE 316
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
M G L+ F + ++ SW +++ EQ G L +F +M+ G +P+ +T
Sbjct: 317 MGG--------LKDF----KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSIT 364
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRD 397
++ + AC++L+ L HGR+IHGY + +++D D+ + N+L+D Y KC S+
Sbjct: 365 IASAVSACTNLSLLRHGREIHGYCI--------KVEELDSDLLVGNSLVDYYAKCRSVEV 416
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ F + + D+ SWN M+ GY + G +EA+++ S M ++PD +T+ G+++ +
Sbjct: 417 ARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQ 476
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G EF M S G+ P + T + L GQ+ L + E + V R
Sbjct: 477 YGDGKAALEFFQRMHS-MGMDP---NTTTISGALAACGQVRN-----LKLGKEIHGYVLR 527
Query: 518 TLLAAS--------RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ S ++ D E+A +L + + + G+ LD+
Sbjct: 528 NHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDL 587
Query: 570 RHTMRQQNVRKN--------PGCSWI-ELKDG--LHTFI 597
M NV N P CS + L+ G +H FI
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI 626
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 180/357 (50%), Gaps = 35/357 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++ C + + L+ G+EIH Y ++ +DS L + SL++ Y+KC ++ A F
Sbjct: 364 TIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM 423
Query: 93 LS----------------------------------CEPNVFTYNAMISGFYSNDFAFKG 118
+ EP++ T+N +++GF
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L+FF M +G+ P+ T + C V + K+IHG V + ++L +GSAL++
Sbjct: 484 LEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISM 543
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y C +E A VF EL RDVV+WN++++ AQ G AL++ R M+ + ++ T+
Sbjct: 544 YSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTM 603
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
L A + + G+ +H +++ G D+ ++N+LIDMYG+ + ++ IF++M +
Sbjct: 604 VSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQ 663
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+D+ SWN +++V+ G + LF + G +P+ +TF+ +L ACSH + G
Sbjct: 664 RDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEG 720
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 3/278 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T +L C NL+ G+EIH Y+LR I S ++LI+MYS C ++ A VF+
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSE 559
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS +V +N++IS + + LD M V + T + C + A+ +
Sbjct: 560 LSTR-DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K+IH + + GLD +I ++L++ Y +C ++++ ++F+ +P RD+V WN M++ Y
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVP 271
G A+ +F+ G+ + T T +LSA G + G + + + D V
Sbjct: 679 HGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ + E LE E M E + W S++
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 334 PD--LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD + ++++L C L L G Q+H +VVNG+ D+ + F+ + L+++Y +
Sbjct: 85 PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGV-------DVCE-FLGSRLLEVYCQ 136
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + DA+ +F KMS+++V SW ++ Y G +E + +F M ++PD F V
Sbjct: 137 TGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKV 196
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAM 507
ACS G++ M S E +CV +DM + G+++ A +
Sbjct: 197 FKACSELKNYRVGKDVYDYMLS-----IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEI 251
Query: 508 PNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+ + +W +++ G L I+ ++ ++P ++S Y G++EE
Sbjct: 252 EFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISG-YAQSGQFEE 309
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 319/600 (53%), Gaps = 17/600 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLA+ + + C+ L +GQ++H+Y + G + +L+N+Y+KC ++ AL F
Sbjct: 391 TLASLVVA---CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
E NV +N M+ + D F M+ ++P++YT+P ++K C + +
Sbjct: 448 LETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH + K L+ Y+ S L++ Y K ++ A + +DVV W M+ GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL FR+M GI +T +SA + K G+ +H G+ S +
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
P NAL+ +Y + + E+ FE E D +WN++++ +Q GN++ LR+F RM
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-AKNGSCKDIDDVFMNNALMDMY 389
G + TF + + A S A + G+Q+H I G ++ C NAL+ MY
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC---------NALISMY 737
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ DA+ F ++S K+ SWN +I Y G G EALD F M + ++P+ VT V
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSACSH G + +G + M S YG+ P EHY CV+DML RAG L+ A E MP
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + +VWRTLL+A +H N ++ E AA + +LEP YVL+SN+Y K++
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M+++ V+K PG SWIE+K+ +H+F D++HP A I+ LT R E G DC
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC 977
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 240/499 (48%), Gaps = 14/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C +L+ G+++H +L+ G +L+++Y + A
Sbjct: 288 PYAFSSVLSA---CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+S + + TYN +I+G + K ++ F M G+ PD T L+ C
Sbjct: 345 IFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLG + I AL+N Y KC +E AL F E + +VVLWN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + + + +FR+M E I +++T +L I +G + G +H ++K +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + LIDMY K + A +I KD+ SW +++ + Q D L F +ML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + D V + + AC+ L AL G+QIH V+G + D+ NAL+ +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS--------DLPFQNALVTL 635
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y++CG + ++ + F + D +WN ++ G+ G +EAL +F M + + TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ A S + + QG++ ++ ++ G E +I M + G +++A + L +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 509 NEANPVVWRTLLAASRLHG 527
+ N V W ++ A HG
Sbjct: 755 TK-NEVSWNAIINAYSKHG 772
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 15/489 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ +L G+ DS + LI++YS+ + A VF+ L + + ++ AMISG
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVAMISGLSK 265
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N+ + + F M LG++P Y F ++ C + ++ +++HGLV KLG D Y+
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV+ Y + A +F + RD V +N ++NG +Q G KA+E+F+RM +G+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ ++ A G G+ +H K+G+ S + AL+++Y K + AL+
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E +++ WN ++ + + + R+F +M P+ T+ ++L C L
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH I+ N ++ + L+DMY K G + A + + + KDV
Sbjct: 506 LELGEQIHSQIIKTNFQLNA--------YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY +AL F M + ++ DEV +SAC+ L +G++ +
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQ 616
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + ++ + R G++ E+Y LA + + W L++ + GN +
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNE- 674
Query: 532 AEIAAQRVF 540
A RVF
Sbjct: 675 ---EALRVF 680
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 238/480 (49%), Gaps = 18/480 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +G+++HS +L+ G+ + L + Y + A VF+ + E +FT+N MI
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-ERTIFTWNKMI 158
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGL 165
S + + F M V P++ TF +++ C +V ++IH + GL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ + L++ Y + F++ A +VF+ L L+D W AM++G ++ +A+ +F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M GI + + + VLSA + + G +HG+V+K+G+ S V NAL+ +Y
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A IF M ++D ++N+++ QCG + + LF RM G +PD T ++++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L G+Q+H Y G A N + AL+++Y KC + A F +
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNK--------IEGALLNLYAKCADIETALDYFLET 450
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V WN+M++ YG+ + + +F M ++ P++ T+ +L C G L G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 466 EF-LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++++ + + Y C +IDM + G+L+ A+++ + + + V W T++A
Sbjct: 511 QIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY-GKGKCVGEALEIFEMMEEKDIFSWNSI 307
G GR +H ++K+G DS + L D Y KG G A ++F+ M E+ IF+WN +
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG-AFKVFDEMPERTIFTWNKM 157
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC-SHLAALMHGRQIHGYIVVNG 366
+ LF RM+S P+ TFS VL AC A QIH I+ G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L D + N L+D+Y++ G + A+ VF + KD +SW MI G +
Sbjct: 218 LR--------DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
EA+ +F M + P F VLSAC L G +
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/599 (33%), Positives = 338/599 (56%), Gaps = 14/599 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS+ + T F L + + + C ++ G+++H++ L++ + +L+ M
Sbjct: 140 FSSMLRSGTAADQFALGSAV---RACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTM 196
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKY 135
YSK + +F + + ++ ++ ++I+GF F + L F M G P+++
Sbjct: 197 YSKNGLVDDGFMLFERIK-DKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEF 255
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
F + C V + ++IHGL K LD D+Y+G +L + Y + + ++ A F +
Sbjct: 256 HFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRI 315
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
D+V WN++VN Y+ G +AL +F M G+ TV G+L A + +GR
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
++H +VK+G D V V N+L+ MY + + A+++F ++++D+ +WNSI+T Q
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + L+LF + + D ++ + VL A + L +Q+H Y GL
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGL-------- 487
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFS 434
+DD ++N L+D Y KCGS+ DA +F M + +DV SW+ +I+GY G KEALD+FS
Sbjct: 488 VDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFS 547
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M ++P+ VTF+GVL+ACS GF+++G + +ME YG+VPT EH +C++D+L RA
Sbjct: 548 RMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARA 607
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L EA MP E + ++W+TLLAAS++H + ++ + AA+ + ++P H YVL+
Sbjct: 608 GKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLC 667
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
NIY A G + E ++ MR V+K+PG SW++LK L FI DRSHPE++ IYA L
Sbjct: 668 NIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAML 726
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 243/520 (46%), Gaps = 20/520 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYML--RTGIIDSPLSITS-----LINMYSKCCQMKYALFV 89
A + C+ +L +G+ +H +++ + D+ L+ + LI MY +C A V
Sbjct: 49 ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N ++ ++I+ N A L F+ M + G D++ ++ C ++
Sbjct: 109 FDEMPAR-NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V +++H K D+ + +ALV Y K +++ +FE + +D++ W +++ G
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227
Query: 210 YAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+AQ G +AL+VFR+M EG + F A +G ++ G +HG+ +K D
Sbjct: 228 FAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V +L DMY + K + A F +E D+ SWNSI+ + G L LF M
Sbjct: 288 DLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 347
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+G +PD +T +L AC AL HGR IH Y+V GL DV + N+L+ M
Sbjct: 348 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLD--------GDVSVCNSLLSM 399
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +C + A VF ++ +DV +WN ++ +E L +FS + +++ D ++
Sbjct: 400 YARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISL 459
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VLSA + G+ ++ + + G+V +ID + G L++A L M
Sbjct: 460 NNVLSASAELGYFEMVKQ-VHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMG 518
Query: 509 NEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
N + W +L+ A + L + R + P H
Sbjct: 519 NNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNH 558
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 194/402 (48%), Gaps = 18/402 (4%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLG-------LDLDVYIGSALVNTYLKCQFMEEAL 189
+ L+ C + ++ + +++H + L + +G+ L+ Y +C + A
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+VF+E+P R+ V W +++ + Q G AL +F M + G +F + + A +G
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
GR VH +K S + V NAL+ MY K V + +FE +++KD+ SW SI+
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 310 VHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q G L++F +M+ G P+ F + AC + + +G QIHG + L
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
+ D+++ +L DMY + ++ A++ F ++ D+ SWN ++ Y ++G E
Sbjct: 287 R--------DLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSE 338
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +FS M ++ L+PD +T G+L AC L GR + + G+ + ++
Sbjct: 339 ALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL-VKLGLDGDVSVCNSLL 397
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M R L+ A ++ + ++ + V W ++L A H + +
Sbjct: 398 SMYARCSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPE 438
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/504 (39%), Positives = 301/504 (59%), Gaps = 14/504 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + + M + GV D T+ LIKCC AV E K++H +F G + +++ + L+
Sbjct: 38 RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y+K +EEA +F+E+P R+VV W M++ Y+ KAL+ M +EG+ + F
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMF 156
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T + VL A N R +H ++K G +S V V +ALID+Y K + AL +F+ M
Sbjct: 157 TYSSVLRAC---DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D+ WNSI+ Q + + L LF RM AGF D T ++VL AC+ LA L GR
Sbjct: 214 PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H +++ K D+ +NNAL+DMY KCGS+ DA F++M +KDV SW+ M
Sbjct: 274 QVHVHVL----------KFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTM 323
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ G +G ++AL++F M E+ +P+ +T +GVL ACSH+G + +G + M+ +G
Sbjct: 324 VAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFG 383
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
V P EHY C+ID+LGRAG+L+EA +L M E + V WRTLL A R+H N DLA AA
Sbjct: 384 VDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAA 443
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+++ +LEP G Y+L+SNIY ++E+V ++R TM + +RK PGCSWIE+ +H F
Sbjct: 444 KKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVF 503
Query: 597 ISSDRSHPEAKSIYAELHSLTARL 620
I D SHP+ + I L+ L R+
Sbjct: 504 ILGDTSHPKIEEIVQRLNDLIERV 527
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 204/384 (53%), Gaps = 23/384 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C+ + +Q+G+ +H ++ G + +L+NMY K ++ A +F+ + E N
Sbjct: 62 IKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMP-ERN 120
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ MIS YSN K L M + GV P+ +T+ +++ C + ++++H
Sbjct: 121 VVSWTTMISA-YSNKLNDKALKCLILMFREGVRPNMFTYSSVLRAC---DGLPNLRQLHC 176
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K GL+ DV++ SAL++ Y K ++ AL VF+E+P RD+V+WN+++ G+AQ + ++
Sbjct: 177 GIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNE 236
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F+RM + G + T+T VL A + + GR VH V+K +D + + NALID
Sbjct: 237 ALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALID 294
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A F M EKD+ SW++++ Q G L LF+ M +G +P+ +T
Sbjct: 295 MYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYIT 354
Query: 339 FSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
VL ACSH + G R + V+ ++ C L+D+ + G
Sbjct: 355 VLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGC-----------LIDLLGRAGR 403
Query: 395 MRDAQMVFTKMS-KKDVASWNIMI 417
+ +A + +M + D +W ++
Sbjct: 404 LDEAVKLIHEMECEPDSVTWRTLL 427
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 167/331 (50%), Gaps = 21/331 (6%)
Query: 196 PLRDVVLWNAMVNGYAQI---GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
PLR V + +VN +A + H+A+ M + G++ T + ++ G +
Sbjct: 13 PLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQ 72
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ VH + GY+ + V+N L++MY K + EA ++F+ M E+++ SW ++++ +
Sbjct: 73 EGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS 132
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
N D L+ M G +P++ T+S+VL AC L L RQ+H I+ GL
Sbjct: 133 NKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLES--- 185
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DVF+ +AL+D+Y+K + +A VF +M +D+ WN +I G+ + G EAL++
Sbjct: 186 -----DVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNL 240
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDML 491
F M A D+ T VL AC+ L GR+ + +++ ++ +IDM
Sbjct: 241 FKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQDLILN----NALIDMY 296
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G L +A A + E + + W T++A
Sbjct: 297 CKCGSLEDANS-AFSRMVEKDVISWSTMVAG 326
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 317/546 (58%), Gaps = 18/546 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN +V+++N++I+ + + L F+ MR+L + P++ TFPC IK C +
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+ H G + D+++ SAL++ Y KC + A +F+E+P R++V W +++
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 209 GYAQIGEFHKALEVFRRMSKE---------GIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
GY Q + H+AL VF+ E G + + VLSA + VHG
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ +K+G D + V N L+D Y K V + ++F+ M EKD+ SWNS++ V+ Q G
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276
Query: 320 TLRLFDRMLSAGF-QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+F ML AG + + VT ST+L AC+H AL G +H ++ G +++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGY--------VNN 328
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
V M +++DMY KCG A+ F M +K+V SW MI GYGM G +EALD+F M
Sbjct: 329 VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
A +KP+ +TF+ VL+ACSH+GFL +G + M Y V P +EHY C++D+LGRAG +
Sbjct: 389 AGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIK 448
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
EAY L +M + V+W +LLAA R+H + +LAEI+A+ +F+L+P +CG YVL++NIY
Sbjct: 449 EAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYA 508
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
G++++V +R ++ + + K PG S +ELK +H F+ D+ HP+ + IY L L+
Sbjct: 509 DAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSV 568
Query: 619 RLREHG 624
+L+E G
Sbjct: 569 KLQEAG 574
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 201/421 (47%), Gaps = 29/421 (6%)
Query: 13 SCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS 72
SC + S + + +T +++ C+ +L G++ H L G ++
Sbjct: 63 SCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSA 122
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM------- 125
LI+MYSKC ++ A +F+ + N+ T+ ++I+G+ ND A + L F
Sbjct: 123 LIDMYSKCGKLSNARVLFDEIP-RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEG 181
Query: 126 --RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
++G D ++ C V + +HG+ K+GLD + + + L++ Y KC
Sbjct: 182 NGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCG 241
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW-MSRFTVTGVL 242
+ + KVF+++ +DVV WN+M+ YAQ G A EVF M K G + T++ +L
Sbjct: 242 EVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLL 301
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A G + G +H V+KMGY + V + ++IDMY K A F+ M+EK++
Sbjct: 302 LACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVR 361
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI---- 358
SW +++ + G L +F +M+ AG +P+ +TF +VL ACSH L G +
Sbjct: 362 SWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAM 421
Query: 359 -HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIM 416
H Y V G+ G ++D+ + G +++A + M ++D W +
Sbjct: 422 SHEYNVEPGVEHYG------------CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSL 469
Query: 417 I 417
+
Sbjct: 470 L 470
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F+ +G +N TL+T + + CAH+ L+ G +H +++ G +++ + TS+I
Sbjct: 281 FHGMLKAGGGKYNE-VTLSTLLLA---CAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
+MY KC Q + A F+ + E NV ++ AMI+G+ + FA + LD F M GV P+
Sbjct: 337 DMYCKCGQAEMARNAFDGMK-EKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395
Query: 135 YTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
TF ++ C + E + + + + ++ V +V+ + +++EA + +
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455
Query: 194 ELPL-RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ + RD VLW +++ HK +E+ ++E
Sbjct: 456 SMKVRRDFVLWGSLLAA----CRIHKDVELAEISARE 488
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/582 (36%), Positives = 323/582 (55%), Gaps = 10/582 (1%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
A + L+ + +H + G I +LI+MY+KC + A VF+ + C+ +V ++
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISW 492
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
NAM+ G N + F M+Q G++PD T+ L+ A+ V ++H +
Sbjct: 493 NAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVE 552
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
GL D +GSA ++ Y++C +++A +F++L +R V WNAM+ G AQ +AL +
Sbjct: 553 TGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSL 612
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M +EG T +LSA + + + VH G + V NAL+ Y K
Sbjct: 613 FLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSK 671
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
V A ++F+ M E+++ +W ++ Q G F +ML G PD T+ ++
Sbjct: 672 CGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSI 731
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ AL +++H + V GL + D+ + NAL+ MY KCGS+ DA+ VF
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGL--------VSDLRVGNALVHMYAKCGSIDDARSVF 783
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
M ++DV SW +MI G G+G EALD F M KP+ ++V VL+ACSH+G +
Sbjct: 784 DDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVD 843
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+GR M YG+ PT+EHYTC++D+LGRAG L EA L MP E + W LL A
Sbjct: 844 EGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGA 903
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
+GN ++AE AA+ +L+P YVL+SNIY A GK+E+ L +R M+++ +RK P
Sbjct: 904 CVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEP 963
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
G SWIE+ + +H+F+ D SHPE+K IYA+L+ L RL+ G
Sbjct: 964 GRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKG 1005
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 235/464 (50%), Gaps = 12/464 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C Q ++ +++H ++++G+ + L+ +Y +C +++ A VF+ L + N
Sbjct: 125 LQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKL-LKKN 183
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ + MI G+ A + ++ MRQ P++ T+ ++K CC + + KKIH
Sbjct: 184 IYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHA 243
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G DV + +ALVN Y+KC +E+A +F+++ R+V+ W M+ G A G +
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +F +M +EG + +T +L+A G + + VH V G + V NAL+
Sbjct: 304 AFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH 363
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +F+ M E+DIFSW ++ Q G LF +M G P+L T
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTT 423
Query: 339 FSTVL--PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+ ++L A + +AL + +H + G I D+ + NAL+ MY KCGS+
Sbjct: 424 YLSILNASAIASTSALEWVKVVHKHAEEAGF--------ISDLRIGNALIHMYAKCGSID 475
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA++VF M +DV SWN M+ G +G G EA +F M + L PD T++ +L+
Sbjct: 476 DARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHG 535
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ L E + G++ + I M R G +++A
Sbjct: 536 STDALEWVNE-VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDA 578
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 218/423 (51%), Gaps = 11/423 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L+ C NL+ G++IH++++++G T+L+NMY KC ++ A +F+ +
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++ MI G + F M++ G +P+ YT+ ++ A+ V
Sbjct: 281 -VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H GL LD+ +G+ALV+ Y K +++A VF+ + RD+ W M+ G AQ
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVL--SALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A +F +M + G + T +L SA+ + +VVH + G+ S +
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLR 459
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ NALI MY K + +A +F+ M ++D+ SWN++M Q G +F +M G
Sbjct: 460 IGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEG 519
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T+ ++L AL ++H + V GL I D + +A + MY +
Sbjct: 520 LVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL--------ISDFRVGSAFIHMYIR 571
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA+++F K+S + V +WN MI G G+EAL +F M PD TF+ +
Sbjct: 572 CGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINI 631
Query: 452 LSA 454
LSA
Sbjct: 632 LSA 634
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 198/377 (52%), Gaps = 13/377 (3%)
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
Q G+ D +++ +++ C +L K++H + K G++ ++Y+ + L+ Y++C ++
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A +VF++L +++ +W M+ GYA+ G A+ V+ +M +E + T +L A
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
K G+ +H +++ G+ S V V AL++MY K + +A IF+ M E+++ SW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ G LF +M GF P+ T+ ++L A + AL +++H + V G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
LA D+ + NAL+ MY K GS+ DA++VF M+++D+ SW +MI G G+G
Sbjct: 351 LAL--------DLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRG 402
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME---SRYGVVPTIEH 483
+EA +F M P+ T++ +L+A + + + E++ ++ G + +
Sbjct: 403 QEAFSLFLQMQRNGCLPNLTTYLSILNASAIAS--TSALEWVKVVHKHAEEAGFISDLRI 460
Query: 484 YTCVIDMLGRAGQLNEA 500
+I M + G +++A
Sbjct: 461 GNALIHMYAKCGSIDDA 477
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 169/331 (51%), Gaps = 20/331 (6%)
Query: 204 NAMVNGYAQ----IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
NA V+G A+ + A+ + + ++GI + F+ +L + + VH
Sbjct: 83 NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142
Query: 260 IVVKMGYDSGVPVMNALIDMY---GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
++K G + + V N L+ +Y G+ +C A ++F+ + +K+I+ W +++ + + G+
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQC---ARQVFDKLLKKNIYIWTTMIGGYAEYGH 199
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ +R++D+M QP+ +T+ ++L AC L G++IH +I+ +G
Sbjct: 200 AEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQS------- 252
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + AL++MY KCGS+ DAQ++F KM +++V SW +MI G G+G+EA +F M
Sbjct: 253 -DVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQM 311
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
P+ T+V +L+A + +G L +E + G+ + ++ M ++G
Sbjct: 312 QREGFIPNSYTYVSILNANASAGALEWVKE-VHSHAVNAGLALDLRVGNALVHMYAKSGS 370
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+++A + M E + W ++ HG
Sbjct: 371 IDDARVVFDGM-TERDIFSWTVMIGGLAQHG 400
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L+ +E+H++ + G++ +L++MY+KC + A VF+++
Sbjct: 727 TYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM 786
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +VF++ MI G + + LDFF M+ G P+ Y++ ++ C V E
Sbjct: 787 -VERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEG 845
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYA 211
++ + G++ + + +V+ + +EEA +P+ D W A++
Sbjct: 846 RRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACV 905
Query: 212 QIGEFHKA 219
G A
Sbjct: 906 TYGNLEMA 913
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 347/622 (55%), Gaps = 40/622 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM---KYA 86
FTL + + + L G++IH R G + S +L+ MY+K ++ K
Sbjct: 114 FTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRT-FSNNALMAMYAKLGRLDDAKSL 172
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
L +F + ++ T+N+MIS F N+ + L F M GV PD TF ++ C
Sbjct: 173 LVLFED----RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSH 228
Query: 147 VMAVLEVKKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + K+IH + ++ ++GSALV+ Y C +E VF+ + R + LWNA
Sbjct: 229 LDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNA 288
Query: 206 MVNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+ GYAQ KAL +F M + G++ + T++ ++ A + +HG V+K
Sbjct: 289 MIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR 348
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G ++ + NALIDMY + + + IF+ ME++DI SWN+I+T + CG L L
Sbjct: 349 GLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLL 408
Query: 325 DRML----------------SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
M F+P+ +T TVLP C+ L+AL G++IH Y + N LA
Sbjct: 409 HEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLA 468
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
V + +AL+DMY KCG + A+ VF +M ++V +WN++I+ YGM G+GKE
Sbjct: 469 SQ--------VTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKE 520
Query: 429 ALDMFSCMCE-----AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+L++F M ++KP EVTF+ + ++CSHSG + +G M++ +G+ P +H
Sbjct: 521 SLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDH 580
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQL 542
Y C++D++GRAG++ EAY L MP+ + V W +LL A R++ N ++ EIAA+ + QL
Sbjct: 581 YACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQL 640
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P +YVL+SNIY + G +++ +++R M+ V+K PGCSWIE D +H F++ D S
Sbjct: 641 QPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLS 700
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HP+++ ++ L +L+ RL++ G
Sbjct: 701 HPQSEKLHDFLETLSERLKKEG 722
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 241/517 (46%), Gaps = 39/517 (7%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIID-SPLSI-TSLINMYSKCCQMKYALFVFNNLS 94
A L+ A L G++IH+++ + G S ++I +L+NMY KC + A VF+ ++
Sbjct: 15 AVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRIT 74
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM---AVL 151
E + ++N++IS + + F M G P +T + C ++ +
Sbjct: 75 -ERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLW 133
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K+IHG F+ G + +AL+ Y K +++A + RD+V WN+M++ ++
Sbjct: 134 LGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFS 192
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q F +AL R M EG+ T VL A + + G+ +H ++ D +
Sbjct: 193 QNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRT--DDVIE 250
Query: 272 ---VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM- 327
V +AL+DMY V +F+ + ++ I WN+++ + Q + + L LF M
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+AG + T S+++PA + IHGY++ GL N ++ NAL+D
Sbjct: 311 AAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN--------RYLQNALID 362
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC---------- 437
MY++ G ++ ++ +F M +D+ SWN +I Y + G+ +AL + M
Sbjct: 363 MYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDG 422
Query: 438 ------EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+ KP+ +T + VL C+ L++G+E + R + + + ++DM
Sbjct: 423 DYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKE-IHAYAIRNLLASQVTVGSALVDMY 481
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ G LN A + MP N + W ++ A +HG
Sbjct: 482 AKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHGK 517
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 204/423 (48%), Gaps = 20/423 (4%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFME 186
G PD + FP ++K + + K+IH VFK G V I + LVN Y KC +
Sbjct: 5 GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+A KVF+ + RD V WN++++ + E+ A++ FR M EG S FT+ + AL
Sbjct: 65 DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM--ALA 122
Query: 247 MMGFFKN-----GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
K G+ +HG + G+ NAL+ MY K + +A + + E++D+
Sbjct: 123 CSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDRDL 181
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
+WNS+++ Q L M+ G +PD VTF++VLPACSHL L G++IH Y
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ I++ F+ +AL+DMY CG + ++VF + + + WN MI GY
Sbjct: 242 ALRTDDV-------IENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYA 294
Query: 422 MDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
++AL +F M A L + T ++ A +S+ +E + + G+
Sbjct: 295 QSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISR-KEGIHGYVIKRGLETN 353
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+IDM R G + + + +M + + V W T++ + + G + A + +
Sbjct: 354 RYLQNALIDMYSRMGDIKTSKRIFDSMEDR-DIVSWNTIITSYVICGRSSDALLLLHEMQ 412
Query: 541 QLE 543
++E
Sbjct: 413 RIE 415
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 164/367 (44%), Gaps = 32/367 (8%)
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS--GVPVMNALIDMYGKGKCVGEALEIF 293
F VL A+ + G+ +H V K GY S V + N L++MYGK +G+A ++F
Sbjct: 11 FAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVF 70
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA--- 350
+ + E+D SWNSI++ + + ++ F ML GF+P T ++ ACS+L
Sbjct: 71 DRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRD 130
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G+QIHG G + F NNALM MY K G + DA+ + +D+
Sbjct: 131 GLWLGKQIHGCCFRKGHWR---------TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDL 181
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI + + + EAL M +KPD VTF VL ACSH L G+E
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
V+ + ++DM GQ+ E+ L + +W ++A + ++
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQV-ESGRLVFDSVLDRKIGLWNAMIAG---YAQSE 297
Query: 531 LAEIAAQRVFQLE--PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
E A ++E G N MS+I A +R + + + G
Sbjct: 298 HDEKALMLFIEMEAAAGLYSNATTMSSIVPA------------YVRCEGISRKEGIHGYV 345
Query: 589 LKDGLHT 595
+K GL T
Sbjct: 346 IKRGLET 352
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 339/592 (57%), Gaps = 18/592 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C + +++ G+ +H + T + + T +I MYS C + VF+ L
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-RK 170
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA++S + N+ + F+ + + PD +T PC+IK C ++ + + I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK-VFEELPLRDVVLWNAMVNGYAQIGE 215
HG+ K+ L DV++G+AL+ Y KC +EEA+K VF+ + + V WNA++ GYAQ +
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
KAL+++ +M+ G+ FT+ +L A M G +HG ++ G + +
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGIS 350
Query: 276 LIDMYGKGKCVGE---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
L+ +Y C G+ A +F+ ME + + SWN ++ + Q G D + LF +MLS G
Sbjct: 351 LLSLY---ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
QP + V ACS L+AL G+++H + + L +D+F++++++DMY K
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT--------EDIFVSSSIIDMYAKG 459
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + +Q +F ++ +KDVASWN++I GYG+ G+GKEAL++F M LKPD+ TF G+L
Sbjct: 460 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACSH+G + G E+ M + + + P +EHYTCV+DMLGRAG++++A L MP + +
Sbjct: 520 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD 579
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W +LL++ R+HGN L E A ++ +LEP NYVL+SN++ GK+++V +R
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGR 639
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ ++K+ GCSWIE+ +H F+ D PE + + L ++ G
Sbjct: 640 MKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIG 691
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 315/545 (57%), Gaps = 17/545 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + +VF++N++I+ + + + L F+ MR+L + P + +FPC IK C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+ H F G D+++ SAL+ Y C +E+A KVF+E+P RD+V W +M+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150
Query: 209 GYAQIGEFHKALEVFRRM------SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
GY G A+ +F+ + + +++ + V+SA + +H V+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 263 KMGYDSGVPVMNALIDMYGKGK--CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
K G+D GV V N L+D Y KG V A +IF+ + +KD S+NSIM+V+ Q G +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 321 LRLFDRMLSAGFQP-DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+F R++ + +T STVL A SH AL G+ IH ++ GL DDV
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE--------DDV 322
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ +++DMY KCG + A+ F +M K+V SW MI GYGM G +AL++F M ++
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P+ +TFV VL+ACSH+G +G + M+ R+GV P +EHY C++D+LGRAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L M + + ++W +LLAA R+H N +LAEI+ R+F+L+ +CG Y+L+S+IY
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
G++++V +R M+ + + K PG S +EL +H F+ D HP+ + IY L L +
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 620 LREHG 624
L E G
Sbjct: 563 LLEAG 567
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 167/327 (51%), Gaps = 10/327 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+++ C+ ++ G++ H G ++LI MYS C +++ A VF+ + +
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KR 140
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM------RQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ ++ +MI G+ N A + F + + D +I C V A
Sbjct: 141 DIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPLRDVVLWNAMVNG 209
+ IH V K G D V +G+ L++ Y K + A K+F+++ +D V +N++++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++A EVFRR+ K + + T++ VL A+ G + G+ +H V++MG +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V ++IDMY K V A + F+ M+ K++ SW +++ + G+ L LF M+
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
+G +P+ +TF +VL ACSH + G
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEG 407
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TFN TL+T + ++ +H L+ G+ IH ++R G+ D + TS+I+MY KC +++
Sbjct: 284 TFN-AITLSTVLLAV---SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A F+ + NV ++ AMI+G+ + A K L+ F M GV P+ TF ++ C
Sbjct: 340 TARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 145 CDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVL 202
+ V + + + + G++ + +V+ + F+++A + + + ++ D ++
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 203 WNAMV 207
W++++
Sbjct: 459 WSSLL 463
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/580 (34%), Positives = 330/580 (56%), Gaps = 9/580 (1%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA + L+ G ++H++ L+ T+ ++MY+KC + A +FN+L + ++
Sbjct: 287 CAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP-KHSLQC 345
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
YNA+I G N+ F+ L FF + + G+ ++ + C + L+ +++H L
Sbjct: 346 YNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSV 405
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K L ++ + +++++ Y KC+ + EA +F+E+ RD V WNA++ + Q G + L
Sbjct: 406 KSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLN 465
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F M + + +FT VL A +G +H ++K G V ALIDMY
Sbjct: 466 LFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYC 525
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + EA +I + +E++ + SWN+I+ + + F ML +PD T++
Sbjct: 526 KCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAI 585
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC++LA++ G+QIHG I+ L DV++ + L+DMY+KCG+M+D+ +V
Sbjct: 586 VLDACANLASVGLGKQIHGQIIKLELH--------SDVYITSTLVDMYSKCGNMQDSALV 637
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F K KD +WN MI GY G G+EAL F M ++P+ TFV +L AC+H GF+
Sbjct: 638 FEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFI 697
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G + M + YG+ P IEHY+C+ID++GR+G+++EA +L MP EA+ V+WRTLL+
Sbjct: 698 DKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
++HGN ++AE A + QLEP +L+SNIY G + +V ++R MR ++K
Sbjct: 758 ICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKE 817
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
PGCSWIE+KD +H F+ +++HP + IY L L ++
Sbjct: 818 PGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMK 857
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 161/601 (26%), Positives = 290/601 (48%), Gaps = 68/601 (11%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T L+ C+ + G ++H ++R G ++ ++L++MY+KC ++ +L +
Sbjct: 174 FDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKI 233
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + + N ++A+I+G ND GL+ F M+++G+ + + + + C + A
Sbjct: 234 FSEIPVK-NWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSA 292
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++H K D+ +G+A ++ Y KC + +A ++F LP + +NA++ G
Sbjct: 293 LKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVG 352
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ + +AL+ F+ + K G+ + +++G SA + +GR +H + VK S
Sbjct: 353 CVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN 412
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V N+++DMYGK + + EA +F+ ME +D SWN+++ HEQ GN + TL LF ML
Sbjct: 413 ICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLR 472
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+PD T+ +VL ACS AL G +IH I+ +GL D F+ AL+DMY
Sbjct: 473 LRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL--------DSFVGGALIDMY 524
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + +A+ + ++ ++ + SWN +I G+ + ++A F M + +KPD T+
Sbjct: 525 CKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYA 584
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV------IDMLGRAGQLNEAYEL 503
VL AC++ + G++ +G + +E ++ V +DM + G + ++ +
Sbjct: 585 IVLDACANLASVGLGKQI-------HGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALV 637
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
PN+ + V W ++ CG Y G
Sbjct: 638 FEKAPNK-DFVTWNAMI--------------------------CG--------YAQHGLG 662
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
EE L M+ +NVR N TF+S R+ I LH A L E+
Sbjct: 663 EEALGYFERMQLENVRPNHA-----------TFVSILRACAHMGFIDKGLHYFNAMLTEY 711
Query: 624 G 624
G
Sbjct: 712 G 712
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 281/571 (49%), Gaps = 61/571 (10%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+ +K RI F + ST NQT P + T +Q C+ +L+ G++ H+ M+
Sbjct: 16 LYNKTLRIFTFCT---ISTLQQNQT-KLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIV 71
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF-------YSND 113
+G I L+ MY +C + YA VF +S + +V +YN MISG+ +N+
Sbjct: 72 SGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMS-QRDVISYNTMISGYADAGEMNLANE 130
Query: 114 FAF------------------------KGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVM 148
F + K +D F M R V D+ TF ++K C
Sbjct: 131 FFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKAC---- 186
Query: 149 AVLEVK----KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+VLE ++HGL+ ++G DV GSAL++ Y KC+ ++++LK+F E+P+++ V W+
Sbjct: 187 SVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWS 246
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A++ G Q E LE+F+ M K GI +S+ V + + K G +H +K
Sbjct: 247 AIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKC 306
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLR 322
+ S + V A +DMY K + +A IF + + + +N+I+ V + G L+
Sbjct: 307 DFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFE--ALQ 364
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
F +L +G + ++ S AC+ + + GRQ+H V + L N + +
Sbjct: 365 FFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSN--------ICVA 416
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+++DMY KC ++ +A +F +M ++D SWN +I + +G +E L++F+ M +++
Sbjct: 417 NSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRME 476
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
PD+ T+ VL ACS L+ G E +++S G+ + +IDM + G + EA
Sbjct: 477 PDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEAK 534
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ + + V W ++A L +++ A
Sbjct: 535 KIHDRIEQQ-TMVSWNAIIAGFTLLKHSEDA 564
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 214/453 (47%), Gaps = 53/453 (11%)
Query: 131 LPDKY-TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
LP K TF +I+ C D ++ K+ H + G DVYI + L+ YL+C + A
Sbjct: 39 LPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAY 98
Query: 190 KVFEELPLRDVVLWNAMVNGYA-------------------------------QIGEFHK 218
KVFE++ RDV+ +N M++GYA Q GE K
Sbjct: 99 KVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRK 158
Query: 219 ALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+++VF M + E + + T VL A ++ G VHG++V+MG+ V +AL+
Sbjct: 159 SIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALL 218
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K K + ++L+IF + K+ W++I+ Q H L LF M G
Sbjct: 219 DMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQS 278
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+++V +C+ L+AL G Q+H + + C D+ + A +DMY KCGS+ D
Sbjct: 279 IYASVFRSCAGLSALKVGTQLHAHAL--------KCDFGSDITVGTATLDMYAKCGSLAD 330
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ +F + K + +N +I+G + +G EAL F + ++ L +E++ G SAC+
Sbjct: 331 AQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACAS 390
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANP 513
GR+ L V T+ CV +DM G+ L+EA + M +
Sbjct: 391 IKGDLDGRQLHSL-----SVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERR-DA 444
Query: 514 VVWRTLLAASRLHGNTD--LAEIAAQRVFQLEP 544
V W ++AA +GN + L A+ ++EP
Sbjct: 445 VSWNAVIAAHEQNGNEEETLNLFASMLRLRMEP 477
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 333/586 (56%), Gaps = 11/586 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L C+ N G++IH +++ G+ + P TSL++MYSKC + A VF+ + +
Sbjct: 776 GALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCV-VD 834
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ +NAM++ + ND + L+ F MRQ VLPD +T +I CC K +
Sbjct: 835 KRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSV 894
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H +FK + I SAL+ Y KC +A VF+ + +D+V W ++++G + G+F
Sbjct: 895 HAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 954
Query: 217 HKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL+VF M + + +T V++A + G VHG ++K G V V +
Sbjct: 955 KEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGS 1014
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LID+Y K AL++F M ++I +WNS+++ + + + ++ LF+ MLS G P
Sbjct: 1015 SLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFP 1074
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D V+ ++VL A S A+L+ G+ +HGY + G+ D + NAL+DMY KCG
Sbjct: 1075 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP--------SDTHLKNALIDMYVKCGF 1126
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F KM K + +WN+MI GYG G + AL +F + +A PD+VTF+ ++SA
Sbjct: 1127 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISA 1186
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+HSGF+ +G+ F +M+ YG+ P +EHY ++D+LGRAG+L EAY AMP EA+
Sbjct: 1187 CNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSS 1246
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W LL+ASR H N +L ++A+++ ++EP YV + N+Y+ G E + M+
Sbjct: 1247 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMK 1306
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++ ++K PGCSWIE+ D + F S S P I+ L+ L + +
Sbjct: 1307 ERGLQKQPGCSWIEVSDISNVFFSGGSSSPIKAEIFKVLNRLKSNM 1352
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 255/531 (48%), Gaps = 23/531 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ C+ TNL G+ IH ++ G P TSL+NMY KC + YA+ VF+ S
Sbjct: 568 LKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGV 627
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLE 152
+V N+MI G++ +G+ F M LGV PD ++ ++ C +
Sbjct: 628 SARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRRED 687
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYA 211
K+IHG + + LD D ++ +AL++ Y K +A +VF E+ + +VVLWN M+ G+
Sbjct: 688 GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFG 747
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+LE++ + + + TG L A GR +H VVKMG D+
Sbjct: 748 GSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +L+ MY K VGEA +F + +K + WN+++ + + N L LF M
Sbjct: 808 VSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKS 867
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T S V+ CS +G+ +H + + + + +AL+ +Y+K
Sbjct: 868 VLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPA--------IESALLTLYSK 919
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC--EAKLKPDEVTFV 449
CG DA +VF M +KD+ +W +I G +G+ KEAL +F M + LKPD
Sbjct: 920 CGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 979
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
V++AC+ LS G + M + G V + + +ID+ + G A ++ +M
Sbjct: 980 SVINACAGLEALSFGLQVHGSM-IKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRP 1038
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRV-FQLEPGHCGNYVLMSNIYVA 559
E N V W ++++ + +L E++ + L G + V ++++ VA
Sbjct: 1039 E-NIVAWNSMISC---YSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVA 1085
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 204/399 (51%), Gaps = 24/399 (6%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE- 193
+TFP L+K C + + K IHG + LG D +I ++LVN Y+KC F++ A++VF+
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 194 ----ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+ RDV + N+M++GY + F + + FRRM G+ F+++ V+S L G
Sbjct: 622 WSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681
Query: 250 FFK--NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNS 306
F+ +G+ +HG +++ D + ALIDMY K +A +F +E+K ++ WN
Sbjct: 682 NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV--TFSTVLPACSHLAALMHGRQIHGYIVV 364
++ + +L L+ ML+ LV +F+ L ACS GRQIH +V
Sbjct: 742 MIVGFGGSEICESSLELY--MLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVK 799
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
GL +D +++ +L+ MY+KCG + +A+ VF+ + K + WN M+ Y +
Sbjct: 800 MGLD--------NDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVEND 851
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEH 483
G AL++F M + + PD T V+S CS G G+ L + P IE
Sbjct: 852 NGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIE- 910
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++ + + G +AY + +M E + V W +L++
Sbjct: 911 -SALLTLYSKCGCDTDAYLVFKSM-EEKDMVAWGSLISG 947
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 21/329 (6%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
N+ + Q GE+ +AL ++ + +W S FT +L A + +G+ +HG ++
Sbjct: 529 NSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSII 588
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE-----KDIFSWNSIMTVHEQCGNH 317
+G+ + +L++MY K + A+++F+ + +D+ NS++ + +
Sbjct: 589 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRF 648
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH--GRQIHGYIVVNGLAKNGSCKD 375
+ F RML G +PD + S V+ G+QIHGY++ N L
Sbjct: 649 KEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLD------- 701
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFS 434
D F+ AL+DMY K G DA VF ++ K +V WN+MI+G+G + +L+++
Sbjct: 702 -GDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYM 760
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGR 493
+K +F G L ACS S + GR+ +++ P + T ++ M +
Sbjct: 761 LAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVS--TSLLSMYSK 818
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAA 522
G + EA E + + +W ++AA
Sbjct: 819 CGMVGEA-ETVFSCVVDKRLEIWNAMVAA 846
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/587 (36%), Positives = 328/587 (55%), Gaps = 14/587 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G + H+ ++T +SLINMY K M A VF+ + E N ++ +ISG+
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP-ERNTVSWATIISGYA 190
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
AF+ + F MR+ DK+ + ++ V K+IH L K GL
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ALV Y KC +++ALK FE +D + W+AM+ GYAQ G+ H+AL +F M G
Sbjct: 251 VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT GV++A +G + G+ +HG +K GY+ + M AL+DMY K + +A
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ F+ ++E DI W S+++ + Q G ++ L L+ RM P +T ++VL ACS LA
Sbjct: 371 KGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLA 430
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH + G + +V + +AL MY KCGS+ D +VF +M +D+
Sbjct: 431 ALEQGKQIHAQTIKYGFSL--------EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDI 482
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI G +G+G +AL++F + KPD VTFV VLSACSH G + +G+ + +
Sbjct: 483 MTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRM 542
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +G+VP +EHY C++D+L RAG+L+E E + + +WR LL A R + N +
Sbjct: 543 MLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYE 602
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L A +++ +L Y+L+S+IY A G+ ++V +R M+ + V K PGCSWIELK
Sbjct: 603 LGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELK 662
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREH-GDCCAGTLFDSDS 636
+H F+ D+ HP+ I +EL RLR+H D C + D++S
Sbjct: 663 SQVHVFVVGDQIHPQIVKICSELR----RLRDHMKDECYESFNDTNS 705
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 157/489 (32%), Positives = 254/489 (51%), Gaps = 15/489 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C Q +LQKG+ IH+ +LRTG S SL+N+Y+KC + A VF +++ +V +
Sbjct: 20 CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT-NKDVVS 78
Query: 102 YNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+N +I+G+ ++F ++ F MR LP+ +TF + + H
Sbjct: 79 WNCLINGYSQKGTVGYSFV-MELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHA 137
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K DV++GS+L+N Y K M +A KVF+ +P R+ V W +++GYA +
Sbjct: 138 LAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFE 197
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A E+F M +E +F T VLSAL + G+ +H + +K G S V NAL+
Sbjct: 198 AWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVT 257
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK C+ +AL+ FE+ +KD +W++++T + Q G+ L LF M G +P T
Sbjct: 258 MYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFT 317
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F V+ ACS + AL G+QIHGY + G C+ ++ AL+DMY KCGS+ DA
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGY----ECQ----IYFMTALVDMYAKCGSLVDA 369
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ F + + D+ W MI GY +G+ + AL ++ M ++ P E+T VL ACS
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L QG++ + +YG + + + M + G L + + MP+ + + W
Sbjct: 430 AALEQGKQ-IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-DIMTWNA 487
Query: 519 LLAASRLHG 527
+++ +G
Sbjct: 488 MISGLSQNG 496
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 197/403 (48%), Gaps = 12/403 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P +F L+ C + + K IH + + G VY+ ++LVN Y KC + +A V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 192 FEELPLRDVVLWNAMVNGYAQIGE--FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
FE + +DVV WN ++NGY+Q G + +E+F+RM E + T +GV +A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G H + +K V V ++LI+MY K C+ +A ++F+ + E++ SW +I++
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ LF M D +++VL A + + +G+QIH + NGL
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
S + NAL+ MY KCG + DA F KD +W+ MI GY G EA
Sbjct: 248 IAS--------VGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEA 299
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
L++F M KP E TFVGV++ACS G L +G++ + + G I T ++D
Sbjct: 300 LNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQ-IHGYSLKAGYECQIYFMTALVD 358
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
M + G L +A + E + V+W ++++ +G + A
Sbjct: 359 MYAKCGSLVDARK-GFDYLKEPDIVLWTSMISGYAQNGENETA 400
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 134/262 (51%), Gaps = 2/262 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + C+ L++G++IH Y L+ G +T+L++MY+KC + A F+ L
Sbjct: 317 TFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYL 376
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
EP++ + +MISG+ N L + M+ ++P + T +++ C + A+ +
Sbjct: 377 K-EPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQG 435
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K G L+V IGSAL Y KC +E+ VF +P RD++ WNAM++G +Q
Sbjct: 436 KQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQN 495
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGVPV 272
GE KALE+F + T VLSA MG + G+V +++ + G V
Sbjct: 496 GEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEH 555
Query: 273 MNALIDMYGKGKCVGEALEIFE 294
++D+ + + E E E
Sbjct: 556 YACMVDILSRAGKLHETKEFIE 577
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 327/573 (57%), Gaps = 10/573 (1%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+ IH + + G + SLI Y K ++ A +F+ L + +V ++N+MISG
Sbjct: 573 KRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELG-DRDVVSWNSMISGCVM 631
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N F+ L+FF M L V D T + C +V ++ + +HG K +V
Sbjct: 632 NGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMF 691
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L++ Y KC + +A++ FE++ + VV W +++ Y + G + A+ +F M +G+
Sbjct: 692 NNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGV 751
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+++T VL A GR VH + K +PV NAL+DMY K + EA
Sbjct: 752 SPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYL 811
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F + KDI SWN+++ + + + L+LF M +PD +T + +LPAC LAA
Sbjct: 812 VFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAA 870
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GR IHG I+ NG + ++ + NAL+DMY KCGS+ A+++F + +KD+
Sbjct: 871 LEIGRGIHGCILRNGYSS--------ELHVANALIDMYVKCGSLVHARLLFDMIPEKDLI 922
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+W +MI G GM G G EA+ F M A +KPDE+TF +L ACSHSG L++G F M
Sbjct: 923 TWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSM 982
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
S + P +EHY C++D+L R G L++AY L MP + + +W LL R+H + +L
Sbjct: 983 ISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVEL 1042
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
AE A+ VF+LEP + G YVL++NIY K+EEV +R + ++ ++K+PGCSWIE++
Sbjct: 1043 AEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQG 1102
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
TF+S+D +HP+AKSI++ L++L +++ G
Sbjct: 1103 KFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEG 1135
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 267/508 (52%), Gaps = 13/508 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA LQ+G+ +HS + GI + L+ MY C ++ +F+++ +
Sbjct: 458 LQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNK 517
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF +N M+S + + + F M++LG+ + YTF C++KC + V E K+IHG
Sbjct: 518 VFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHG 577
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V+KLG + ++L+ TY K ++ A K+F+EL RDVV WN+M++G G H
Sbjct: 578 CVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHS 637
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE F +M + + T+ ++A +G GR +HG VK + V N L+D
Sbjct: 638 ALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLD 697
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A++ FE M +K + SW S++ + + G +D +RLF M S G PD+ +
Sbjct: 698 MYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYS 757
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++VL AC+ +L GR +H YI N +A C + +NALMDMY KCGSM +A
Sbjct: 758 MTSVLHACACGNSLDKGRDVHNYIRKNNMAL---CLPV-----SNALMDMYAKCGSMEEA 809
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+VF+++ KD+ SWN MI GY + EAL +F+ M + + +PD +T +L AC
Sbjct: 810 YLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSL 868
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L GR + R G + +IDM + G L A L M E + + W
Sbjct: 869 AALEIGRGIHGCI-LRNGYSSELHVANALIDMYVKCGSLVHA-RLLFDMIPEKDLITWTV 926
Query: 519 LLAASRLH--GNTDLAEIAAQRVFQLEP 544
+++ +H GN +A R+ ++P
Sbjct: 927 MISGCGMHGLGNEAIATFQKMRIAGIKP 954
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 201/391 (51%), Gaps = 11/391 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D + +++ C + + E K +H ++ G+ ++ +G+ LV Y+ C + E ++F
Sbjct: 450 DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIF 509
Query: 193 EE-LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
+ L V LWN M++ YA+IG++ +++ +F++M K GI + +T + +L +G
Sbjct: 510 DHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRV 569
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ +HG V K+G+ S V+N+LI Y K V A ++F+ + ++D+ SWNS+++
Sbjct: 570 GECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGC 629
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G L F +ML DL T + AC+++ +L GR +HG V ++
Sbjct: 630 VMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSR-- 687
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
+V NN L+DMY+KCG++ DA F KM +K V SW +I Y +G +A+
Sbjct: 688 ------EVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIR 741
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M + PD + VL AC+ L +GR+ + + + + ++DM
Sbjct: 742 LFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIR-KNNMALCLPVSNALMDMY 800
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G + EAY + +P + + V W T++
Sbjct: 801 AKCGSMEEAYLVFSQIPVK-DIVSWNTMIGG 830
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 22/395 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT + S+ CA+ +L G+ +H ++ + +L++MYSKC + A+ F
Sbjct: 654 LATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFE 713
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + V ++ ++I+ + + F M GV PD Y+ ++ C ++
Sbjct: 714 KMG-QKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLD 772
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ + +H + K + L + + +AL++ Y KC MEEA VF ++P++D+V WN M+ GY+
Sbjct: 773 KGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYS 832
Query: 212 QIGEFHKALEVFRRMSKEGIWMSR---FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ ++AL++F M KE SR T+ +L A + + GR +HG +++ GY S
Sbjct: 833 KNSLPNEALKLFAEMQKE----SRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSS 888
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH---DGTLRLFD 325
+ V NALIDMY K + A +F+M+ EKD+ +W +++ CG H + + F
Sbjct: 889 ELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS---GCGMHGLGNEAIATFQ 945
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+M AG +PD +TF+++L ACSH L G ++ C + +
Sbjct: 946 KMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMI-------SECNMEPKLEHYACM 998
Query: 386 MDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+D+ + G++ A + M K D W ++ G
Sbjct: 999 VDLLARTGNLSKAYNLIETMPIKPDATIWGALLCG 1033
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/614 (34%), Positives = 338/614 (55%), Gaps = 18/614 (2%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY--SKCCQMKYALFVFNNLSCEPN 98
L H T++ K ++ H+ +LRT ++ +PL + LI+ S + YA +F + P+
Sbjct: 17 LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQ-NPD 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
F N MI G+ + ++ + + M + GV D YT+P ++ C + AV ++ H
Sbjct: 76 PFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHC 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K G D+++ +AL+ Y C A VF+E +RDVV WN M+N + G K
Sbjct: 136 EVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEK 195
Query: 219 ALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A ++ M+K + + T+ ++ A +G + G+ +H ++G D + V NA++
Sbjct: 196 AFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAIL 255
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A E+F + EKD+ SW S+++ + G L LF +M + D +
Sbjct: 256 DMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEI 315
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T VL AC+ AL G+ IH ++++ N D+ + AL+DMY KCGS+
Sbjct: 316 TLVGVLSACAQTGALDQGKYIH--LLIDKFEINC------DLVLETALVDMYAKCGSIDL 367
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF +M ++V +WN +I G M G G++A+ +F M KL PD+VTF+ +L ACSH
Sbjct: 368 ALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSH 427
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G M++++ + P +EHY CV+D+L RA ++++A MP +AN V+W
Sbjct: 428 AGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWA 487
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A R G+ DLAE +RV +LEP CG YV++SN+Y +++ L +R M+ +
Sbjct: 488 TLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKG 547
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGT---LFDS 634
+ K PGCSWIEL +H F++ DRSH + + IYA + +T R+ G GT LFD
Sbjct: 548 IEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDI 607
Query: 635 DSTASGFEKHRLYL 648
+ ++H L+L
Sbjct: 608 EEEE---KEHSLFL 618
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 149/304 (49%), Gaps = 5/304 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ + CA NL++G+ +HSY G+ ++ ++++MY KC ++ A VFN +
Sbjct: 215 TMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI 274
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++ +M+SG + + + L F M+ + D+ T ++ C A+ +
Sbjct: 275 R-EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG 333
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH L+ K ++ D+ + +ALV+ Y KC ++ AL+VF + +R+V WNA++ G A
Sbjct: 334 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMH 393
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV-HGIVVKMGYDSGVPV 272
G A+ +F +M + + T +L A G G + + K + +
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEH 453
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
++D+ + + V +AL E M K + W +++ G+ D ++ R++
Sbjct: 454 YGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIE-- 511
Query: 332 FQPD 335
+PD
Sbjct: 512 LEPD 515
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 323/591 (54%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA KG+++HSY+++ G+ + SL+++Y KC ++ A F
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV +N M+ + + F M+ G++P++YT+P +++ C + A+
Sbjct: 376 ETE-NVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G +VY+ S L++ Y K ++ A + + L DVV W AM+ GY Q
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH 494
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +AL++F+ M +GI + +SA + G+ +H GY + +
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+ +Y + +A FE ++ KD SWN++++ Q G+ + L++F +M AG +
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+L TF + + A ++ A + G+QIH ++ G +N L+ +Y+KCG
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEA--------SNVLITLYSKCG 666
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA+ F +M +K+V SWN MI GY G G EA+ +F M + L P+ VTFVGVLS
Sbjct: 667 SIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLS 726
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G +++G + M +G+VP EHY CV+D+LGRA L A E MP E +
Sbjct: 727 ACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDA 786
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++WRTLL+A +H N ++ E AA+ + +LEP YVL+SN+Y GK++ R M
Sbjct: 787 MIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMM 846
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + V+K PG SWIE+K+ +H F DR HP A+ IY + L R E G
Sbjct: 847 KDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIG 897
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 254/499 (50%), Gaps = 14/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C + G+++H ++++ G+ +L+ +YS+ + A
Sbjct: 213 PYVFSSVLSA---CTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +YN++ISG F+ + L F M+ + PD T L+ C V
Sbjct: 270 IFSKMHRRDRI-SYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVG 328
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A + K++H V K+G+ D+ I +L++ Y+KC +E A + F +VVLWN M+
Sbjct: 329 AGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLV 388
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y Q+G ++ +F +M EG+ +++T +L +G G +H V+K G+
Sbjct: 389 AYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQF 448
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V + LIDMY K + A I + + E+D+ SW +++ + Q L+LF M
Sbjct: 449 NVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEME 508
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ G + D + FS+ + AC+ + AL G+QIH ++G + +D+ + NAL+ +
Sbjct: 509 NQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYS--------EDLSIGNALVSL 560
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG +DA + F K+ KD SWN +I G+ G +EAL +FS M +A ++ + TF
Sbjct: 561 YARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTF 620
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+SA +++ + QG++ +M + G E +I + + G + +A MP
Sbjct: 621 GSAVSATANTANIKQGKQIHAMM-IKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMP 679
Query: 509 NEANPVVWRTLLAASRLHG 527
E N V W ++ HG
Sbjct: 680 -EKNVVSWNAMITGYSQHG 697
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 249/501 (49%), Gaps = 12/501 (2%)
Query: 33 ATCIASLQLCAH-QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+T + L+ C+ + Q ++IH+ ++ G SPL LI++YSK + A VF
Sbjct: 112 STFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE 171
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
L + +V ++ AMISG N + + F M + V+P Y F ++ C +
Sbjct: 172 RLFLKDSV-SWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFK 230
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+++HG + K GL + ++ +ALV Y + + A ++F ++ RD + +N++++G A
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G +AL++F +M + + TV +LSA +G G+ +H V+KMG S +
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLI 350
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +L+D+Y K + A E F E +++ WN ++ + Q GN + +F +M G
Sbjct: 351 IEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG 410
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ T+ ++L C+ L AL G QIH ++ +G N V++ + L+DMY K
Sbjct: 411 LMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN--------VYVCSVLIDMYAK 462
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A+ + ++ ++DV SW MI GY EAL +F M ++ D + F
Sbjct: 463 HGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSA 522
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+SAC+ L+QG++ + G + ++ + R G+ +AY LA +
Sbjct: 523 ISACAGIQALNQGQQ-IHAQSYISGYSEDLSIGNALVSLYARCGRAQDAY-LAFEKIDAK 580
Query: 512 NPVVWRTLLAASRLHGNTDLA 532
+ + W L++ G+ + A
Sbjct: 581 DNISWNALISGFAQSGHCEEA 601
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 248/489 (50%), Gaps = 18/489 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C + +L +++H+ + ++G + + LI++Y ++ A+ +F+++ NV
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP-SSNVSF 78
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLV 160
+N +ISG + A + L F+ M V PD+ TF +++ C A +V ++IH +
Sbjct: 79 WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
G + + L++ Y K ++ A VFE L L+D V W AM++G +Q G +A+
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F +M K + + + + VLSA + FK G +HG +VK G S V NAL+ +Y
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLY 258
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ + A +IF M +D S+NS+++ Q G D L+LF++M +PD VT +
Sbjct: 259 SRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++L AC+ + A G+Q+H Y++ G++ D+ + +L+D+Y KC + A
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKMGMSS--------DLIIEGSLLDLYVKCFDIETAHE 370
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
F ++V WN+M++ YG G E+ +F M L P++ T+ +L C+ G
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 461 LSQGREF-LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L G + +++S + Y C +IDM + G+L+ A + L E + V W
Sbjct: 431 LDLGEQIHTQVIKSGF----QFNVYVCSVLIDMYAKHGELDTARGI-LQRLREEDVVSWT 485
Query: 518 TLLAASRLH 526
++A H
Sbjct: 486 AMIAGYTQH 494
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 11/405 (2%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G+ + T+ L + C + ++L+ KK+H +FK G D + +GS L++ YL
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
++ A+K+F+++P +V WN +++G + L +F M E + T VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 245 LI-MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
F+ +H ++ G+ S V N LID+Y K V A +FE + KD S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W ++++ Q G D + LF +M + P FS+VL AC+ + G Q+HG+IV
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
GL+ + F+ NAL+ +Y++ G++ A+ +F+KM ++D S+N +I G
Sbjct: 241 KWGLSS--------ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQR 292
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G AL +F M +KPD VT +LSAC+ G +G++ + + G+ +
Sbjct: 293 GFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYV-IKMGMSSDLII 351
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++D+ + + A+E L E N V+W +L A GN
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVMLVAYGQLGN 395
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 23/200 (11%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT + +++ A+ N+++G++IH+ M++TG + LI +YSKC ++ A
Sbjct: 618 FTFGSAVSA---TANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E NV ++NAMI+G+ + + + + F M+QLG++P+ TF ++ C V
Sbjct: 675 FFEMP-EKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGL 733
Query: 150 VLE-------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVV 201
V E + K HGLV K + Y+ +V+ + + A + EE+P+ D +
Sbjct: 734 VNEGLSYFRSMSKEHGLVPK----PEHYV--CVVDLLGRAALLCCAREFIEEMPIEPDAM 787
Query: 202 LWNAM-----VNGYAQIGEF 216
+W + V+ +IGEF
Sbjct: 788 IWRTLLSACTVHKNIEIGEF 807
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 336/586 (57%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L + + ++ G+++H ++R+G+ PL +L+ +YSK Q+ A +F+ + + +
Sbjct: 118 LSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMP-QID 176
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +N MI G+ N F FN M G+ PD TF + + ++ ++K+IHG
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G+ LDVY+ SAL++ Y KC+ A K+F D+V++ AM++GY G
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+FR + ++ + + T + +L A + K GR +HG ++K + PV +A+++
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMN 356
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + A IF + KD WNSI+T Q G + + LF +M G + D VT
Sbjct: 357 MYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVT 416
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S L AC+++ AL +G++IHG+++ D+F +AL++MY KCG + A
Sbjct: 417 VSAALSACANIPALHYGKEIHGFMIKGAFES--------DLFDMSALINMYAKCGKLNIA 468
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
++VF M +K+ +WN +I YG G ++L +F M E ++PD +TF+ +LS+C H+
Sbjct: 469 RLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHA 528
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G + M YG+ +EHY C+ D+ GRAG L+EA+E+ +MP VW T
Sbjct: 529 GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGT 588
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+HGN +LAE+A++ + LEP + G Y+L++++ GK+ V I+H M+++ V
Sbjct: 589 LLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGV 648
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCSWIE+ + F ++D SHPE+ IY+ L SL LR+ G
Sbjct: 649 QKVPGCSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVG 694
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 230/411 (55%), Gaps = 24/411 (5%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
GV PDKYTFP +IKCC + V K I ++ ++G DLD+++ S+L+ Y +E+A
Sbjct: 5 GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+ F+++ +D VLWN M+NGY Q GE A+++F+ M T VLS
Sbjct: 65 RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
+ GR +HG+VV+ G D V N L+ +Y KG+ +G+A ++F+MM + D+ WN ++
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ Q G D LF+ M+SAG +PD +TF++ LP+ + ++L ++IHGYIV +G+
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGV- 243
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM---VFTKMSKKDVASWNIMILGYGMDGQ 425
I DV++N+AL+D+Y KC RDA M +F +K D+ + MI GY ++G
Sbjct: 244 -------ILDVYLNSALIDLYFKC---RDAVMACKMFNLSTKFDIVIYTAMISGYVLNGM 293
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY- 484
K+AL++F + + K+ P+ +TF +L AC+ + GRE Y + +E
Sbjct: 294 NKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGREL-----HGYIIKNELEEKC 348
Query: 485 ---TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ +++M + G+L+ A+ L + + + W +++ + G + A
Sbjct: 349 PVGSAIMNMYAKCGRLDLAH-LIFGRISIKDAICWNSIITSFSQDGKPEEA 398
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/489 (30%), Positives = 247/489 (50%), Gaps = 11/489 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C N++ G+ I +L G +SLI +Y+ ++ A F+ + + +
Sbjct: 17 IKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKM-IDKD 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+N MI+G+ + + F M PD TF C++ C V +++HG
Sbjct: 76 CVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHG 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
LV + GLD +G+ LV Y K + + +A K+F+ +P D+V+WN M+ GY Q G
Sbjct: 136 LVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDD 195
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +F M GI T T L +L K + +HG +V+ G V + +ALID
Sbjct: 196 ASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALID 255
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K + A ++F + + DI + ++++ + G + L +F +L P+ +T
Sbjct: 256 LYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALT 315
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS++LPAC+ LAA+ GR++HGYI+ N L + C + +A+M+MY KCG + A
Sbjct: 316 FSSILPACAGLAAIKLGRELHGYIIKNELEEK--CP------VGSAIMNMYAKCGRLDLA 367
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
++F ++S KD WN +I + DG+ +EA+ +F M +K D VT LSAC++
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L G+E M + + + +I+M + G+LN A L + E N V W +
Sbjct: 428 PALHYGKEIHGFM-IKGAFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAWNS 485
Query: 519 LLAASRLHG 527
++AA HG
Sbjct: 486 IIAAYGYHG 494
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 189/344 (54%), Gaps = 6/344 (1%)
Query: 12 SSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT 71
S FN S+G + + FT + L A ++L++ +EIH Y++R G+I +
Sbjct: 197 SMLFNEMISAGIKPDSITFT-----SFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNS 251
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
+LI++Y KC A +F NLS + ++ Y AMISG+ N L+ F + Q ++
Sbjct: 252 ALIDLYFKCRDAVMACKMF-NLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMI 310
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P+ TF ++ C + A+ +++HG + K L+ +GSA++N Y KC ++ A +
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F + ++D + WN+++ ++Q G+ +A+ +FR+M EG+ TV+ LSA +
Sbjct: 371 FGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPAL 430
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
G+ +HG ++K ++S + M+ALI+MY K + A +F +M+EK+ +WNSI+ +
Sbjct: 431 HYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAY 490
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
G +L LF ML G QPD +TF T+L +C H + G
Sbjct: 491 GYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDG 534
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 93/193 (48%), Gaps = 8/193 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ T A+L CA+ L G+EIH +M++ +++LINMY+KC ++ A V
Sbjct: 412 YDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLV 471
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F NL E N +N++I+ + + + L F++M + G+ PD TF ++ C
Sbjct: 472 F-NLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQ 530
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV-LWNAM- 206
V + V+ + + G+ + + + + + + ++EA +V +P +W +
Sbjct: 531 VEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLL 590
Query: 207 ----VNGYAQIGE 215
V+G ++ E
Sbjct: 591 GACRVHGNVELAE 603
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/619 (34%), Positives = 336/619 (54%), Gaps = 52/619 (8%)
Query: 30 FTLATCIASLQLCAH----QTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMK 84
FT + + LC +++ +++HS + + + +P L+ Y+ C +
Sbjct: 1018 FTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPW 1077
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+F+ + + NV +N MI + +N L F +M G+ PD YT+PC++K
Sbjct: 1078 STRHIFDEIP-KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKAS 1136
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ +IH V ++GLDL+V++G+ L++ Y KC + EA +V +Z+P RDVV WN
Sbjct: 1137 SGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWN 1196
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++V G A+ G+F ALEV + M G+ T+ +L A
Sbjct: 1197 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------------------- 1236
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
V N +D V E+F + K + SWN ++ V+ + +F
Sbjct: 1237 -------VTNTCLDN------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 1283
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+M PD ++ ++VLPAC L+AL+ GR+IH Y+V L N + + NA
Sbjct: 1284 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN--------LLLENA 1335
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY KCG + A+ VF +M +DV SW MI YGM+G+G++A+ +FS M + L PD
Sbjct: 1336 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 1395
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ FV VLSACSH+G L +GR + LM +VP IEH+ C++D+LGRAGQ++EAY
Sbjct: 1396 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFI 1455
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP E N VW LL+A R++ N + +AA ++FQL P G YVL+SNIY G++E
Sbjct: 1456 KQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWE 1515
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V +R M+ + ++K PG S EL + +HTF++ D+SHP++K IY EL L +++E
Sbjct: 1516 DVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKE-- 1573
Query: 625 DCCAGTLFDSDSTASGFEK 643
AG + ++DS E+
Sbjct: 1574 ---AGYVPETDSALHDVEE 1589
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/554 (36%), Positives = 316/554 (57%), Gaps = 47/554 (8%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L+ +Y+ C + A +F+ ++ + NV +N MI + +N L + M G +P
Sbjct: 60 LMRVYAACGEPGLARHIFDEIT-DKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP 118
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YT+PC++K ++ +IHG V K+GLDL++Y+G+ L+ Y KC+ ++EA +V
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVL 178
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P RDVV WN+MV+ YAQ G F+ ALE+ R M + + T+ +L A
Sbjct: 179 DEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA-------- 230
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALID--MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
V N D +Y K E+F + +K + SWN ++ +
Sbjct: 231 -------------------VTNTTSDNVLYVK--------EMFLKLTKKSVISWNVMIAM 263
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + L+ +M + G +PD+V+ +VLPA L+AL GR++H + L N
Sbjct: 264 YVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPN 323
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+ + NAL+DMY KCG +RDA+ VF +M +DV SW +I YG GQG++A+
Sbjct: 324 --------LLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAV 375
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F+ M + L PD + FV VL+ACSH+G L GR + LM + G+ P +EH+ CV+D+
Sbjct: 376 AVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM-AECGITPKLEHFACVVDL 434
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGRAG+++EAY MP E + VW LL+A R++ N ++ +AA ++ L P H G Y
Sbjct: 435 LGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYY 494
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+SNIY G++ +V IR M ++ ++K PG S +EL DG+HTF++ D SHP++K IY
Sbjct: 495 VLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIY 554
Query: 611 AELHSLTARLREHG 624
EL L +++E G
Sbjct: 555 EELDVLVGKMKELG 568
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 172/371 (46%), Gaps = 44/371 (11%)
Query: 153 VKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+KK+HG V L + +G L+ Y C A +F+E+ ++VV +N M+ Y
Sbjct: 37 LKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYV 96
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ AL V++ M +G +T VL A G +HG V+K+G D +
Sbjct: 97 NNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLY 156
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N LI MYGK K + EA ++ + + +D+ SWNS+++V+ Q G + L L M +
Sbjct: 157 VGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALN 216
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ T +++LPA ++ + D+V +Y K
Sbjct: 217 LKPNDCTMASLLPAVTNTTS-------------------------DNV--------LYVK 243
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
+F K++KK V SWN+MI Y + KEA+ ++S M ++PD V+ V V
Sbjct: 244 --------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSV 295
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L A LS GR E R ++P + +IDM + G L +A + M
Sbjct: 296 LPAYGDLSALSLGRRVHKFAE-RKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR- 353
Query: 512 NPVVWRTLLAA 522
+ V W ++++A
Sbjct: 354 DVVSWTSIISA 364
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L G+ +H + R ++ + L +LI+MY+KC ++ A VFN + +V ++ ++IS
Sbjct: 305 LSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR-DVVSWTSIIS 363
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + F MR G+ PD F ++ C + + + L+ + G+
Sbjct: 364 AYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITP 423
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
+ + +V+ + ++EA ++PL D +W +++
Sbjct: 424 KLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 338/601 (56%), Gaps = 16/601 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T L+LC + L + +H Y ++ G+ +L+N+YSKC +M+ A +F
Sbjct: 182 TRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLF 241
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV-MA 149
+ + E +V +N M+ G+ + F+ + G+ PD+++ ++ C
Sbjct: 242 DWMR-ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTD 300
Query: 150 VLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
LE+ K++HG+ K GLD DV + ++LVN Y K A +VF ++ D++ WN+M++
Sbjct: 301 DLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMIS 360
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-----FFKNGRVVHGIVVK 263
AQ +++ +F + EG+ FT+ + A G+ +H +K
Sbjct: 361 SCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIK 420
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G+DS + V + ++DMY K + A +F + D +W S+++ GN D LR+
Sbjct: 421 AGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRI 480
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ RM + PD TF+T++ A S + AL GRQ+H ++ C + D F+
Sbjct: 481 YHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI------KLDC--VSDPFVGT 532
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+L+DMY KCG++ DA +F KM+ +++A WN M++G G +EA+++F M ++P
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D V+F+G+LSACSH+G S+ E+L M + YG+ P IEHY+C++D LGRAG + EA ++
Sbjct: 593 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 652
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP +A+ + R LL A R+ G+ + + A R+F LEP YVL+SNIY A ++
Sbjct: 653 IETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 712
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++V D R M+++NV+K+PG SWI++K+ LH F+ DRSHP+A IY ++ + +RE
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIRED 772
Query: 624 G 624
G
Sbjct: 773 G 773
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 255/498 (51%), Gaps = 23/498 (4%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL G+ H+ ++ +G +L+ MYSKC + A VF+ + E ++ T+NA++
Sbjct: 92 NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDT-TPERDLVTWNAIL 150
Query: 107 SGFY----SND-FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ SND A +GL F +R + T ++K C + + + +HG
Sbjct: 151 GAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+GL+ DV++ ALVN Y KC M +A +F+ + RDVVLWN M+ GY Q+G +A +
Sbjct: 211 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 270
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGF--FKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+F + G+ F+V +L+ + G + G+ VHGI VK G DS V V N+L++M
Sbjct: 271 LFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM 330
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD---- 335
Y K C A E+F M+ D+ SWNS+++ Q + ++ LF +L G +PD
Sbjct: 331 YSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTL 390
Query: 336 -LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+T +T AC L L G+QIH + + G D+ +N+ ++DMY KCG
Sbjct: 391 ASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDS--------DLHVNSGILDMYIKCGD 442
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M +A +VF +S D +W MI G +G +AL ++ M ++++ PDE TF ++ A
Sbjct: 443 MVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKA 502
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
S L QGR+ L + V T ++DM + G + +AY L M N N
Sbjct: 503 SSCVTALEQGRQ-LHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIA 560
Query: 515 VWRTLLAASRLHGNTDLA 532
+W +L HGN + A
Sbjct: 561 LWNAMLVGLAQHGNAEEA 578
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/596 (34%), Positives = 336/596 (56%), Gaps = 12/596 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T A L+LCA + +L G+ +H+ + G+ ++ T+L NMY KC + A VF+
Sbjct: 16 LRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFD 75
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIKCCCDVMA 149
+ V +NA+++G+ N ++ M+ + G PD T ++ C D A
Sbjct: 76 RMPSRDRV-AWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARA 134
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +++H + GLD V + +A+++ Y KC +E A VF+ +P+R+ V WNAM++G
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA G +A+ +F RM +EG+ ++ +V L A +G+ R VH ++V++G S
Sbjct: 195 YADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSN 254
Query: 270 VPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V NALI Y K K A ++F E+ +K SWN+++ Q + RLF RM
Sbjct: 255 VSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQ 314
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+PD T +V+PA + ++ + R IHGY + + L + DV++ AL+DM
Sbjct: 315 LENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ--------DVYVLTALIDM 366
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCG + A+ +F + V +WN MI GYG G G+ A+++F M P+E TF
Sbjct: 367 YSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTF 426
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL+ACSH+G + +G+++ M+ YG+ P +EHY ++D+LGRAG+L+EA+ MP
Sbjct: 427 LSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP 486
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E V+ +L A +LH N +LAE +AQ +F+L P +VL++NIY +++V
Sbjct: 487 IEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVAR 546
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++ ++K PG S I+LK+ +HTF S +H AK IYA L L +++ G
Sbjct: 547 VRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMG 602
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFV 89
T A+ +A+LQ C L + + +H ++R G+ S +S+T +LI Y+KC + A V
Sbjct: 219 TDASVLAALQACGELGYLDEVRRVHELLVRVGL-SSNVSVTNALITTYAKCKRADLAAQV 277
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN L + ++NAMI GF N+ F M+ V PD +T +I D+
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
L+ + IHG + LD DVY+ +AL++ Y KC + A ++F+ R V+ WNAM++G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDS 268
Y G A+E+F M G + T VL+A G G+ + K G +
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEP 457
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMM 296
G+ ++D+ G+ + EA + M
Sbjct: 458 GMEHYGTMVDLLGRAGKLDEAWSFIKNM 485
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P L TF+ +L C+ A L GR +H + GLA + + AL +MY KC
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLAS--------ESIASTALANMYFKCR 65
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC--EAKLKPDEVTFVGV 451
DA+ VF +M +D +WN ++ GY +G A++ M E +PD VT V V
Sbjct: 66 RPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSV 125
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+ + L RE + R G+ + T V+D + G + A + MP
Sbjct: 126 LPACADARALHACRE-VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR- 183
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
N V W ++ +GN A R+ Q
Sbjct: 184 NSVSWNAMIDGYADNGNATEAMALFWRMVQ 213
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/620 (33%), Positives = 344/620 (55%), Gaps = 15/620 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
AT L +CA +L G ++HS ++ G+ +L+ MY+KC + A +F
Sbjct: 241 NFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLF 300
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L + ++ T+N MISG N + F M++ G PD T L+ D+ +
Sbjct: 301 E-LMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGL 359
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K++HG + + +++DV++ SALV+ Y KC+ + A +++ DVV+ + M++GY
Sbjct: 360 KQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGY 419
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G +AL++FR + ++ I + T+ VL M G+ +HG V++ Y+
Sbjct: 420 VLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKC 479
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +AL+DMY K + + IF M +KD +WNS+++ Q G L LF +M
Sbjct: 480 YVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCME 539
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + + +T S L AC+ L A+ +G++IHG + + G K D+F +AL+DMY
Sbjct: 540 GIKYNNITISAALSACASLPAIYYGKEIHG-VTIKGPIKA-------DIFAESALIDMYA 591
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG++ A VF M K+ SWN +I YG G KE++ + M E KPD VTF+
Sbjct: 592 KCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLA 651
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
++SAC+H+G + +G + M +Y + P +EH+ C++D+ R+G+L++A + MP +
Sbjct: 652 LISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFK 711
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ +W LL A R+H N +LA+IA+Q +F+L+P + G YVLMSNI G+++ V +R
Sbjct: 712 PDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVR 771
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-----D 625
M+ + K PG SW+++ + H F++SD+SHPE++ IY L +L LRE G D
Sbjct: 772 RLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPD 831
Query: 626 CCAGTLFDSDSTASGFEKHR 645
C + ++T F+K++
Sbjct: 832 LC-HPMHPDNNTQVEFKKYK 850
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 256/505 (50%), Gaps = 19/505 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNN 92
+A L+ C +L G +IH+ + +G + + T L+ MY + + A+ VF+
Sbjct: 36 LAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSA 95
Query: 93 L--SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCLIKCCCDVM 148
L + + +N +I GF + + F+ M PD +T P ++K C +
Sbjct: 96 LPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALG 155
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ + +H +GL DVY+GSALV Y + A F+ +P RD VLWN M++
Sbjct: 156 AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMD 215
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G + G+ A+ +FR M G + T+ LS +G +H + VK G +
Sbjct: 216 GCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEP 275
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V N L+ MY K +C+ +A +FE+M + D+ +WN +++ Q G LF M
Sbjct: 276 EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+G +PD +T ++LPA + L L G+++HGYIV N C ++ DVF+ +AL+D+
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRN-------CVNM-DVFLVSALVDI 387
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC +R AQ ++ DV + MI GY ++G +EAL MF + E +KP+ VT
Sbjct: 388 YFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTI 447
Query: 449 VGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
VL C+ L G++ ++ + Y +E + ++DM + G+L+ ++ + L M
Sbjct: 448 ASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLKM 505
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
++ + V W +++++ +G A
Sbjct: 506 -SQKDEVTWNSMISSFSQNGKPQEA 529
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 337/593 (56%), Gaps = 12/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNN 92
T + L + A L+ G++IH ++R+G+ D +S+ + LINMY K + A VF
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGL-DQVVSVGNCLINMYVKAGSVSRARSVFGQ 995
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA-VL 151
++ E ++ ++N MISG + + F H+ + +LPD++T +++ C +
Sbjct: 996 MN-EVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYY 1054
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+IH K G+ LD ++ +AL++ Y K MEEA +F D+ WNA+++GY
Sbjct: 1055 LATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYI 1114
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G+F KAL ++ M + G + T+ A + K G+ +H +VVK G++ +
Sbjct: 1115 VSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLF 1174
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + ++DMY K + A +F + D +W ++++ + G + L + +M +
Sbjct: 1175 VTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSK 1234
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
QPD TF+T++ ACS L AL GRQIH IV A D F+ +L+DMY K
Sbjct: 1235 VQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAF--------DPFVMTSLVDMYAK 1286
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ DA+ +F + + + +ASWN MI+G G KEAL F M + PD VTF+GV
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGV 1346
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSHSG +S+ E M+ YG+ P IEHY+C++D L RAG++ EA ++ +MP EA
Sbjct: 1347 LSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEA 1406
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ ++RTLL A R+ + + + A+++ LEP YVL+SN+Y A ++E V R+
Sbjct: 1407 SASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARN 1466
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR+ NV+K+PG SW++LK+ +H F++ DRSH E IY ++ + R+RE G
Sbjct: 1467 MMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEG 1519
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 207/437 (47%), Gaps = 13/437 (2%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N +S F A++ +D F M V D TF ++ + + K+IH
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G+V + GLD V +G+ L+N Y+K + A VF ++ D++ WN M++G G
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMM-GFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
++ +F + ++ + +FTV VL A + G + +H +K G V AL
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
ID+Y K + EA +F + D+ SWN+IM + G+ LRL+ M +G + D
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQ 1138
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T A L L G+QIH +V G D+F+ + ++DMY KCG M
Sbjct: 1139 ITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNL--------DLFVTSGVLDMYLKCGEME 1190
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF+++ D +W MI G +GQ + AL + M +K++PDE TF ++ ACS
Sbjct: 1191 SARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACS 1250
Query: 457 HSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L QGR+ +++ P + T ++DM + G + +A L N
Sbjct: 1251 LLTALEQGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGL-FKRTNTRRIAS 1307
Query: 516 WRTLLAASRLHGNTDLA 532
W ++ HGN A
Sbjct: 1308 WNAMIVGLAQHGNAKEA 1324
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 230/503 (45%), Gaps = 39/503 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++C + + +H Y ++ G+ +L+N+Y+K ++ A +F
Sbjct: 759 TRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLF 818
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ ++ +V +N M+ + ++ + F+ + G PD T L + +
Sbjct: 819 DGMAVR-DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNI 877
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
LE+K+ KL + D GS DV++WN ++ +
Sbjct: 878 LELKQFKAYATKLFMYDD--DGS-------------------------DVIVWNKALSRF 910
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q GE +A++ F M + T +L+ + + + G+ +HGIV++ G D V
Sbjct: 911 LQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVV 970
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N LI+MY K V A +F M E D+ SWN++++ G + ++ +F +L
Sbjct: 971 SVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRD 1030
Query: 331 GFQPDLVTFSTVLPACSHLAALMH-GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
PD T ++VL ACS L + QIH + G+ + D F++ AL+D+Y
Sbjct: 1031 SLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGV--------VLDSFVSTALIDVY 1082
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K G M +A+ +F D+ASWN ++ GY + G +AL ++ M E+ + D++T V
Sbjct: 1083 SKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLV 1142
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
A L QG++ ++ R G + + V+DM + G++ A + +P+
Sbjct: 1143 NAAKAAGGLVGLKQGKQIHAVVVKR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPS 1201
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
+ V W T+++ +G + A
Sbjct: 1202 -PDDVAWTTMISGCVENGQEEHA 1223
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 215/485 (44%), Gaps = 63/485 (12%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+L C + L+ ++L G+ H+ +L +G +LI MY+KC + A +F
Sbjct: 655 SLPQCFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLF 714
Query: 91 NNL-SCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+ ++ T+NA++S ++ D + G F +R+ V ++T + K C
Sbjct: 715 DTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSA 774
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + +HG K+GL DV++ ALVN Y K + EA +F+ + +RDVVLWN M+
Sbjct: 775 SPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMK 834
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y ++A+ +F + G T+ + RVV
Sbjct: 835 AYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL------------SRVV----------- 871
Query: 269 GVPVMNALIDMYGKGKCVGEALEI--FEMMEEK---------DIFSWNSIMTVHEQCGNH 317
KC LE+ F+ K D+ WN ++ Q G
Sbjct: 872 ---------------KCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEA 916
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ F M+++ D +TF +L + L L G+QIHG ++ +GL +
Sbjct: 917 WEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQV------- 969
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
V + N L++MY K GS+ A+ VF +M++ D+ SWN MI G + G + ++ MF +
Sbjct: 970 -VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLL 1028
Query: 438 EAKLKPDEVTFVGVLSACS--HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
L PD+ T VL ACS G+ + M++ GVV T +ID+ + G
Sbjct: 1029 RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKA--GVVLDSFVSTALIDVYSKRG 1086
Query: 496 QLNEA 500
++ EA
Sbjct: 1087 KMEEA 1091
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 315/545 (57%), Gaps = 17/545 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + +VF++N++I+ + + + L F+ MR+L + P + +FPC IK C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+ H F G D+++ SAL+ Y C +E+A KVF+E+P R++V W +M+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 209 GYAQIGEFHKALEVFRRM------SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
GY G A+ +F+ + + +++ + V+SA + +H V+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 263 KMGYDSGVPVMNALIDMYGKGK--CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
K G+D GV V N L+D Y KG V A +IF+ + +KD S+NSIM+V+ Q G +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 321 LRLFDRMLSAGFQP-DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+F R++ + +T STVL A SH AL G+ IH ++ GL DDV
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE--------DDV 322
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ +++DMY KCG + A+ F +M K+V SW MI GYGM G +AL++F M ++
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P+ +TFV VL+ACSH+G +G + M+ R+GV P +EHY C++D+LGRAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L M + + ++W +LLAA R+H N +LAEI+ R+F+L+ +CG Y+L+S+IY
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
G++++V +R M+ + + K PG S +EL +H F+ D HP+ + IY L L +
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 620 LREHG 624
L E G
Sbjct: 563 LLEAG 567
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 167/327 (51%), Gaps = 10/327 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+++ C+ ++ G++ H G ++LI MYS C +++ A VF+ + +
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KR 140
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM------RQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+ ++ +MI G+ N A + F + + D +I C V A
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPLRDVVLWNAMVNG 209
+ IH V K G D V +G+ L++ Y K + A K+F+++ +D V +N++++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++A EVFRR+ K + + T++ VL A+ G + G+ +H V++MG +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V ++IDMY K V A + F+ M+ K++ SW +++ + G+ L LF M+
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
+G +P+ +TF +VL ACSH + G
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEG 407
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TFN TL+T + ++ +H L+ G+ IH ++R G+ D + TS+I+MY KC +++
Sbjct: 284 TFN-AITLSTVLLAV---SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A F+ + NV ++ AMI+G+ + A K L+ F M GV P+ TF ++ C
Sbjct: 340 TARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 145 CDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVL 202
+ V + + + + G++ + +V+ + F+++A + + + ++ D ++
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 203 WNAMV 207
W++++
Sbjct: 459 WSSLL 463
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 323/559 (57%), Gaps = 22/559 (3%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ +V+++N++I+ F + + + L F+ MR+L + P++ TFPC IK C + + K+
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH F G D+++ SAL++ Y KC ++ +A K+F+E+P R+VV W +M++GY Q
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167
Query: 216 FHKALEVFRR-----------MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+A+ +F+ + G+ + + V+SA + VHG+ VK
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G++ + V N L+D Y K + + ++F+ MEE D+ SWNS++ V+ Q G LF
Sbjct: 228 GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLF 287
Query: 325 DRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
M+ G + + VT S VL AC+H AL G+ IH +V L D++ +
Sbjct: 288 SDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELE--------DNLVVGT 339
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+++DMY KCG + A+ F ++ +K+V SW +M+ GYGM G GKEA+ +F M +KP
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ +TFV VL+ACSH+G L +G + M+ + V P IEHY+C++D+LGRAG L EAY L
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGL 459
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
M + + +VW +LL A R+H N +L EI+A+++F+L+P +CG YVL+SNIY G++
Sbjct: 460 IQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRW 519
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++V +R M+ + K PG S +E K +H F+ D+ HP+ + IY L L +L+E
Sbjct: 520 DDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEV 579
Query: 624 G--DCCAGTLFDSDSTASG 640
G L+D D G
Sbjct: 580 GYMPNVTSVLYDVDVEEKG 598
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 22/358 (6%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
FSS S TF P T+ +C + LCA G++IH G
Sbjct: 73 AFSSMRKLSLHPNRSTF--PCTIKSCSSLYDLCA-------GKQIHQQAFVFGYGSDIFV 123
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFF------- 122
++LI+MYSKC + A +F+ + E NV ++ +MISG+ N+ A + + F
Sbjct: 124 ASALIDMYSKCGYLNDARKLFDEIP-ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVD 182
Query: 123 ----NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
+ + +GV D C+I C V + +HGL K G + + +G+ L++
Sbjct: 183 ETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDA 242
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFT 237
Y KC + + KVF+ + DV WN+++ YAQ G +A +F M K G + + T
Sbjct: 243 YAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVT 302
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
++ VL A G + G+ +H VVKM + + V +++DMY K V A + F+ ++
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
K++ SW ++ + G+ +++F M+ G +P+ +TF +VL ACSH L G
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG 420
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ T A L CAH LQ G+ IH +++ + D+ + TS+++MY KC +++ A
Sbjct: 298 YNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKA 357
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L NV ++ M++G+ + + + F M + G+ P+ TF ++ C A
Sbjct: 358 FDRLK-RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSH--A 414
Query: 150 VLEVKKIHGLVFKLGLDLDVYIG----SALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
L + H K+ + DV G S +V+ + +++EA + +E+ ++ D ++W
Sbjct: 415 GLLKEGWHWF-NKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWG 473
Query: 205 AMVNGYAQIGEFHKALEV 222
+++ G +I HK +E+
Sbjct: 474 SLL-GACRI---HKNVEL 487
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/586 (35%), Positives = 327/586 (55%), Gaps = 15/586 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI+ YS + A VF+++ C+ ++ ++ M++ + N F + L FN MR +G
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCK-DMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P+ +T +K C + A K +HG K D D+++G AL+ Y K + +A +
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+FEE+P D++ W+ M+ YAQ +AL++F RM + + + FT VL A
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
G+ +H V+K G +S V V NA++D+Y K + ++++FE + +++ +WN+I+
Sbjct: 354 LDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVG 413
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q G+ + + LF ML QP VT+S+VL A + LAAL G QIH + K
Sbjct: 414 YVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNK- 472
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D + N+L+DMY KCG + DA++ F KM+K+D SWN MI GY M G EAL
Sbjct: 473 -------DTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEAL 525
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
++F M KP+++TFVGVLSACS++G L +G+ M Y + P IEHYTC++ +
Sbjct: 526 NLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWL 585
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGR G+ +EA +L + + + +VWR LL A +H DL + AQ V ++EP +
Sbjct: 586 LGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATH 645
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+SN+Y G+++ V +R M+++ VRK PG SW+E + +H F D SHP+ K I
Sbjct: 646 VLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLIC 705
Query: 611 AELHSLTARLREHG---DCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
A L L + R+ G DC A L D E+H E +A
Sbjct: 706 AMLEWLNKKTRDAGYVPDCNAVLLDVQDDEK---ERHLWVHSERLA 748
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 195/367 (53%), Gaps = 10/367 (2%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + K G LD++ + L+N Y++ +++A K+F+E+P + + + + GY++
Sbjct: 55 KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+FH+AL R+ KEG ++ F T +L L+ M +H V K+G+ + V
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG 174
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALID Y V A +F+ + KD+ SW ++ + + ++ +L+LF++M G++
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ T S L +C L A G+ +HG + C D D+F+ AL+++Y K G
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCAL-------KGCYD-HDLFVGIALLELYAKSG 286
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DAQ +F +M K D+ W++MI Y + KEALD+F M + + P+ TF VL
Sbjct: 287 EIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQ 346
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+ S L G++ + ++G+ + ++D+ + G++ + +L +P+ N
Sbjct: 347 ACASSVSLDLGKQIHSCV-LKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDR-ND 404
Query: 514 VVWRTLL 520
V W T++
Sbjct: 405 VTWNTII 411
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 156/330 (47%), Gaps = 25/330 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ LQ CA +L G++IHS +L+ G+ + +++++Y+KC +++ ++ +
Sbjct: 339 FTFASV---LQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKL 395
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L + N T+N +I G+ + ++ F HM + + P + T+ +++ + A
Sbjct: 396 FEELP-DRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAA 454
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +IH L K + D + ++L++ Y KC + +A F+++ RD V WNAM+ G
Sbjct: 455 LEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICG 514
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-- 267
Y+ G +AL +F M ++ T GVLSA G G+ H + YD
Sbjct: 515 YSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQ-AHFESMSKDYDIK 573
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIM---TVHEQ------CGNH 317
+ ++ + G+ EA+++ E+ + + W +++ +H++ C H
Sbjct: 574 PCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQH 633
Query: 318 --------DGTLRLFDRMLSAGFQPDLVTF 339
D T L M + + D V F
Sbjct: 634 VLEMEPHDDATHVLLSNMYATAGRWDNVAF 663
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/606 (34%), Positives = 342/606 (56%), Gaps = 9/606 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
AT L +CA + +L G ++H+ ++ G+ +L++MY+KC ++ A +F
Sbjct: 247 NFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLF 306
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L ++ T+N MISG N L F M++ G+ PD T L+ ++
Sbjct: 307 G-LMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGF 365
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K+IHG + + +DV++ SALV+ Y KC+ + A VF+ DVV+ + M++GY
Sbjct: 366 KQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGY 425
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+++FR + GI + V L A M + G+ +HG V+K Y+
Sbjct: 426 VLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRC 485
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +AL+DMY K + + +F M KD +WNS+++ Q G + L LF +M+
Sbjct: 486 YVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIME 545
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + + VT S++L AC+ L A+ +G++IHG I++ G + D+F +AL+DMY
Sbjct: 546 GVKYNNVTISSILSACAGLPAIYYGKEIHG-IIIKGPIRA-------DLFAESALIDMYG 597
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG++ A VF M +K+ SWN +I YG G KE++D+ CM E K D VTF+
Sbjct: 598 KCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLA 657
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
++SAC+H+G + +G M Y + P +EH +C++D+ RAG+L++A + MP +
Sbjct: 658 LISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFK 717
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ +W LL A R+H N +LAEIA+Q +F+L+P +CG YVLMSNI G+++ V +R
Sbjct: 718 PDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMR 777
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGT 630
M+ + V+K PG SW+++ + H F+++D++HP+++ IY L SL L++ G+
Sbjct: 778 RLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELKQEGNGNLIV 837
Query: 631 LFDSDS 636
+F S S
Sbjct: 838 MFPSGS 843
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 268/532 (50%), Gaps = 24/532 (4%)
Query: 11 FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS---- 66
S+ F+ + SS + L +A L+ C ++L G IH+ + +G++D+
Sbjct: 18 LSAAFSETASSATNASPCAYRL---LALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPG 74
Query: 67 PLSI-TSLINMYSKCCQMKYALFVFNNLS--CEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
P ++ T L+ MY + + A+ VF++L +N +I GF + F+
Sbjct: 75 PAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYV 134
Query: 124 HM--RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
M PD +T P ++K C + A+ + +H LGLD D+Y+GSAL+ Y
Sbjct: 135 KMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYAD 194
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
++ A +VF+ + RD VLWN M++GY + G+ A+ +FR M G + T+
Sbjct: 195 AGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACF 254
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
LS +G +H + VK G + V V N L+ MY K +C+ EA +F +M D+
Sbjct: 255 LSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL 314
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
+WN +++ Q G D LRLF M +G QPD VT +++LPA + L G++IHGY
Sbjct: 315 VTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGY 374
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
IV N C + DVF+ +AL+D+Y KC +R AQ VF DV + MI GY
Sbjct: 375 IVRN-------CAHV-DVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYV 426
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPT 480
++ + A+ MF + +KP+ V L AC+ + G+E ++++ Y
Sbjct: 427 LNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCY 486
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+E + ++DM + G+L+ ++ + M + + V W +++++ +G + A
Sbjct: 487 VE--SALMDMYSKCGRLDLSHYMFSKM-SAKDEVTWNSMISSFAQNGEPEEA 535
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/595 (35%), Positives = 326/595 (54%), Gaps = 10/595 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T +A L CA +L+ G EIH +L+ G T+LINMY+KC ++ A F
Sbjct: 105 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 164
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L +V ++ AMI+ +D + M+ GV+P+K T + D +
Sbjct: 165 KRLE-HRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYL 223
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
E K I+ LV ++ DV + ++ +N + + +A ++FE++ RDVV WN ++ Y
Sbjct: 224 SEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFY 283
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q F +A+ +F R+ ++GI + T +L+ + G+V+H +V + GYD V
Sbjct: 284 VQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDV 343
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+ +YG+ + G+A +IF M KD+ +W + + Q G L+LF M
Sbjct: 344 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 403
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P T VL C+HLAAL GRQIH +I+ NG ++ + AL++MY
Sbjct: 404 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRM--------EMVVETALINMYG 455
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M +A+ VF KM+K+D+ WN M+ Y G E L +F+ M K D V+FV
Sbjct: 456 KCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVS 515
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN- 509
VLSA SHSG ++ G ++ M + + PT E Y CV+D+LGRAG++ EA ++ L +
Sbjct: 516 VLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGC 575
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ ++W TLL A R H TD A+ AA++V + +P H G YV++SN+Y A G ++ V +
Sbjct: 576 LPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRM 635
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R MR + V+K PG S IE+ + +H F+ DRSHP IYAEL L + +R G
Sbjct: 636 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 690
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 252/496 (50%), Gaps = 13/496 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A LQ C+ N+ G+ +H ++ G + L LI MY++C + A VF L
Sbjct: 9 VALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE- 67
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+VF + MI + + L F M++ V+P K T+ ++ C ++ + +
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + + G + DV++G+AL+N Y KC + A F+ L RDVV W AM+ Q +
Sbjct: 128 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 187
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
F A ++RRM +G+ ++ T+ V +A + G+ ++ +V +S V VMN+
Sbjct: 188 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNS 247
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++M+G +G+A +FE M ++D+ +WN ++T + Q N +RLF R+ G + +
Sbjct: 248 AMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAN 307
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+TF +L + L +L G+ IH + G + DV + ALM +Y +C +
Sbjct: 308 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR--------DVVVATALMSLYGRCEAP 359
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A +F M KDV +W +M + Y +G KEAL +F M +P T V VL C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419
Query: 456 SHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+H L +GR+ ++E+ + + +E T +I+M G+ G++ EA + M + +
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFEKMAKR-DIL 476
Query: 515 VWRTLLAASRLHGNTD 530
VW ++L A HG D
Sbjct: 477 VWNSMLGAYAQHGYYD 492
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 195/399 (48%), Gaps = 16/399 (4%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD F L++ C V +++H V G + + + L+ Y +C + EA +V
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
FE L +DV W M+ Y Q G++ +AL +F +M +E + ++ T +L+A
Sbjct: 63 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
K+G +HG +++ G++ V V ALI+MY K V A + F+ +E +D+ SW +++
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA- 181
Query: 312 EQCGNHDG---TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
C HD L+ RM G P+ +T TV A L G+ I+ + +
Sbjct: 182 --CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
DV + N+ M+M+ G + DA+ +F M +DV +WNI+I Y + E
Sbjct: 240 S--------DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGE 291
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+ +F + + +K +++TFV +L+ + L++G+ L++ G + T ++
Sbjct: 292 AVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEA-GYDRDVVVATALM 350
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ GR +A+++ + M ++ + + W + A +G
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNG 388
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 110/230 (47%), Gaps = 12/230 (5%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F+PD F +L CS + HGR++H ++ G +N + L+ MY +
Sbjct: 1 FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNN--------LVCGHLIQMYAQ 52
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ +AQ VF + +KDV +W MI Y G AL MF M E + P +VT+V +
Sbjct: 53 CGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAI 112
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+AC+ + L G E + + G + T +I+M + G + A++ +
Sbjct: 113 LNACASTESLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWD-SFKRLEHR 170
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
+ V W ++AA H LA +R+ QL+ G N + + ++ A G
Sbjct: 171 DVVSWTAMIAACVQHDQFALARWLYRRM-QLD-GVVPNKITLYTVFNAYG 218
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/585 (34%), Positives = 331/585 (56%), Gaps = 13/585 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G +H+ +L+TG ++NMY+KC +A VF+ + E N
Sbjct: 10 LHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM-FEKN 68
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +++AMISG+ +D ++ Q+ ++P++Y F +I C + AV +KIH
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYS---QMFLVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G + ++ ++L++ Y+KC +AL VF P + V +NA++ G+ + + +
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
LE F+ M ++G+ RF GVL K G +H VK+ DS + N +I
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLV 337
MY + + EA + F ++EEKD+ SWN+++ C +H LR+F M +PD
Sbjct: 246 MYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDF 305
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF++ L AC+ LA++ HG+QIH +++ L + D+ + NAL++MY KCG +
Sbjct: 306 TFTSALAACAGLASMSHGKQIHAHLMRTRLYQ--------DLGVGNALVNMYAKCGCIGY 357
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +F+KM ++ SWN +I G+G G G+ A+++F M + ++PD VTF+G+L+AC+H
Sbjct: 358 AYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNH 417
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G+ + ME YG+ P IEH++C+IDMLGRAG+LNEA E P +PVV
Sbjct: 418 AGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLV 477
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL+ASRLHG+ + E A+ + +L+P YVL+SN+Y + G ++ V + R ++
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
++K PG S IE+ + F D +H K I L +L+ + E
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLSWAVGE 582
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/612 (32%), Positives = 338/612 (55%), Gaps = 42/612 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L A ++ KG+E+H +++R + + ++L++MYSKC ++ A VF +L E N
Sbjct: 384 LMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL-LERN 442
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+YNA+++G+ A + L+ ++ M+ + G+ PD++TF L+ C + + ++IH
Sbjct: 443 EVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 502
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ + + ++ + + LV+ Y +C + A ++F + R+ WN+M+ GY Q GE
Sbjct: 503 AHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 562
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL +F++M GI F+++ +LS+ + + + GR +H +V+ + + L+
Sbjct: 563 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV 622
Query: 278 DMYGK--------------------------------GKCVGEALEIFEMMEEKDIFSWN 305
DMY K G+ +A +F+ ME+++ WN
Sbjct: 623 DMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR-ANDAKNLFDQMEQRNTALWN 681
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
SI+ + G + F ML + + D++T T++ CS L AL HG Q+H I+
Sbjct: 682 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKK 741
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
G +C V + AL+DMY+KCG++ A+ VF M+ K++ SWN MI GY G
Sbjct: 742 GFV---NCS----VVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGC 794
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
KEAL ++ M + + P+EVTF+ +LSACSH+G + +G M+ Y + EHYT
Sbjct: 795 SKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYT 854
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+LGRAG+L +A E MP E W LL A R+H + D+ +AAQR+F+L+P
Sbjct: 855 CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQ 914
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+ G YV+MSNIY A G+++EV DIR M+ + V+K+PG SWIE+ + F + ++HP+
Sbjct: 915 NPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPK 974
Query: 606 AKSIYAELHSLT 617
+ IY L LT
Sbjct: 975 TEEIYNNLRHLT 986
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 159/541 (29%), Positives = 279/541 (51%), Gaps = 30/541 (5%)
Query: 11 FSSCFNFSTSSGNQTFN-----HPFTLATCIAS----------LQLCAHQTNLQKGQEIH 55
FS+ F +T++ FN P ++ T AS +Q C + Q+G+ IH
Sbjct: 35 FSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIH 94
Query: 56 SYMLRTGIIDSPLSITSLINMYSKC-C--QMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+ M+ G +T ++ +Y++ C + YA +F + E N+ +N MI +
Sbjct: 95 TQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMP-ERNLTAWNTMILAYARV 153
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
D + L + MR G DK+TFP +IK C + + V+++ V K GL+ ++++G
Sbjct: 154 DDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVG 213
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
ALV+ Y + +M++A+ +E+ VV WNA++ GY +I + +A +F RM K G+
Sbjct: 214 GALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVC 273
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
FT L + G+ VH ++ G+ V NALIDMY K L++
Sbjct: 274 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 333
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ M E++ +WNSI++ Q G+ + L LF RM +G++ + ++L A + LA +
Sbjct: 334 FDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADI 393
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GR++HG++V N L D+ + +AL+DMY+KCG + +A VF + +++ S
Sbjct: 394 GKGRELHGHLVRNLLNS--------DIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVS 445
Query: 413 WNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+N ++ GY +G+ +EAL+++ M E ++PD+ TF +L+ C++ +QGR+ +
Sbjct: 446 YNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 505
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
R + I T ++ M G+LN A E+ M E N W +++ + +G T
Sbjct: 506 -IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQE 563
Query: 532 A 532
A
Sbjct: 564 A 564
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 103/196 (52%), Gaps = 13/196 (6%)
Query: 24 QTFNH---------PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSL 73
++FNH + + T + + LC+ L+ G ++HS +++ G ++ + + T+L
Sbjct: 695 ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
++MYSKC + A VF+N++ + N+ ++NAMISG+ + + + L + M + G+ P+
Sbjct: 755 VDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPN 813
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIH-GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
+ TF ++ C V E +I + ++ + +V+ + +E+A +
Sbjct: 814 EVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFV 873
Query: 193 EELPLR-DVVLWNAMV 207
E++P+ +V W A++
Sbjct: 874 EKMPIEPEVSTWGALL 889
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 329/580 (56%), Gaps = 13/580 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G +H+ +L+TG ++NMY+KC +A VF+ + E N
Sbjct: 10 LHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM-FEKN 68
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +++AMISG+ +D ++ Q+ ++P++Y F +I C + AV +KIH
Sbjct: 69 LVSWSAMISGYDQAGEPQMAIDLYS---QMFLVPNEYVFASVISACASLSAVTLGQKIHS 125
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G + ++ ++L++ Y+KC +AL VF P + V +NA++ G+ + + +
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
LE F+ M ++G+ RF GVL K G +H VK+ DS + N +I
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIIT 245
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLV 337
MY + + EA + F ++EEKD+ SWN+++ C +H LR+F M +PD
Sbjct: 246 MYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDF 305
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF++ L AC+ LA++ HG+QIH +++ L + D+ + NAL++MY KCG +
Sbjct: 306 TFTSALAACAGLASMSHGKQIHAHLMRTRLYQ--------DLGVGNALVNMYAKCGCIGY 357
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +F+KM ++ SWN +I G+G G G+ A+++F M + ++PD VTF+G+L+AC+H
Sbjct: 358 AYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNH 417
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G+ + ME YG+ P IEH++C+IDMLGRAG+LNEA E P +PVV
Sbjct: 418 AGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLV 477
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL+ASRLHG+ + E A+ + +L+P YVL+SN+Y + G ++ V + R ++
Sbjct: 478 SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSG 537
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++K PG S IE+ + F D +H K I L +L+
Sbjct: 538 LKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTLS 577
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 339/645 (52%), Gaps = 79/645 (12%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
K + H+ +L++G + LI YS A V ++ +P +++++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP-DPTIYSFSSLIYAL 91
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + F+ M G++PD + P L K C ++ A K+IH + GLD+D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ ++ + Y++C M +A KVF+ + +DVV +A++ YA+ G + + + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 230 GIWMSRFTVTGVLSALIMMGFFKN-----------------------------------G 254
GI + + G+LS G+ K G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK-------------------GKC---------- 285
R++HG V+K G V++A+IDMYGK G C
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 286 --VGEALEIFEMMEEK----DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
V +ALE+FE+ +E+ ++ SW SI+ Q G L LF M AG +P+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++LPAC ++AAL HGR HG+ V L +D+V + +AL+DMY KCG + +Q
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHL--------LDNVHVGSALIDMYAKCGRINLSQ 443
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+VF M K++ WN ++ G+ M G+ KE + +F + +LKPD ++F +LSAC G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+G ++ +M YG+ P +EHY+C++++LGRAG+L EAY+L MP E + VW L
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L + RL N DLAEIAA+++F LEP + G YVL+SNIY A G + EV IR+ M ++
Sbjct: 564 LNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
KNPGCSWI++K+ ++T ++ D+SHP+ I ++ ++ +R+ G
Sbjct: 624 KNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 69/381 (18%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
++CA + + G++IH +G+ S+ +MY +C +M A VF+ +S
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 95 ------------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
E N+ ++N ++SGF + + + + F
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC-- 182
+ LG PD+ T ++ D + + IHG V K GL D + SA+++ Y K
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 183 ---------QF--------------------MEEALKVFEELPLR----DVVLWNAMVNG 209
QF +++AL++FE + +VV W +++ G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AQ G+ +ALE+FR M G+ + T+ +L A + +GR HG V++
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V +ALIDMY K + + +F MM K++ WNS+M G + +F+ ++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 330 AGFQPDLVTFSTVLPACSHLA 350
+PD ++F+++L AC +
Sbjct: 483 TRLKPDFISFTSLLSACGQVG 503
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + L G+ H + +R ++D+ ++LI+MY+KC ++ + VFN +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ +N++++GF + A + + F + + + PD +F L+ C V E
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 154 KKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
K ++ + G+ + S +VN + ++EA + +E+P D +W A++N
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/638 (33%), Positives = 338/638 (52%), Gaps = 82/638 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS--- 94
LQLCA +L G+++HS + + +D L + L++ Y+ C +K VF+ +
Sbjct: 106 LQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGL-KLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 95 -----------------------------------------------CEPNVFTYNAMIS 107
C+ +V ++N+MIS
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ SN +GL + M LG+ D T ++ C + + K +H L K +
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ + L++ Y KC ++ AL+VFE++ R+VV W +M+ GY + G A+ + ++M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 344
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
KEG+ + +T +L A G NG+ VH + S + V NAL+DMY K +
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F M KDI SWN+++ G L+ PD T + +LPAC+
Sbjct: 405 GANSVFSTMVVKDIISWNTMV----------GELK-----------PDSRTMACILPACA 443
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L+AL G++IHGYI+ NG + D + NAL+D+Y KCG + A+++F +
Sbjct: 444 SLSALERGKEIHGYILRNGYS--------SDRHVANALVDLYVKCGVLGLARLLFDMIPS 495
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ SW +MI GYGM G G EA+ F+ M +A ++PDEV+F+ +L ACSHSG L QG F
Sbjct: 496 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRF 555
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M++ + + P +EHY C++D+L R G L++AY+ +P + +W LL R++
Sbjct: 556 FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYH 615
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+ +LAE A+RVF+LEP + G YVL++NIY K EEV +R + ++ +RKNPGCSWI
Sbjct: 616 DIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675
Query: 588 ELKDGLHTFIS-SDRSHPEAKSIYAELHSLTARLREHG 624
E+K ++ F+S ++ SHP +K I + L + +++E G
Sbjct: 676 EIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG 713
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 32/390 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT I+ L CA+ L G+ +HS +++ +L++MYSKC + AL VF
Sbjct: 251 LATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 310
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV ++ +MI+G+ + ++ + M + GV D ++ C ++
Sbjct: 311 KMG-ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLD 369
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K +H + + ++++ +AL++ Y KC ME A VF + ++D++ WN MV
Sbjct: 370 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---- 425
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
GE SR T+ +L A + + G+ +HG +++ GY S
Sbjct: 426 --GELKPD--------------SR-TMACILPACASLSALERGKEIHGYILRNGYSSDRH 468
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL+D+Y K +G A +F+M+ KD+ SW ++ + G + + F+ M AG
Sbjct: 469 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 528
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM-DMYT 390
+PD V+F ++L ACSH L G + YI+ N +I+ + A M D+ +
Sbjct: 529 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF-------NIEPKLEHYACMVDLLS 580
Query: 391 KCGSMRDA-QMVFTKMSKKDVASWNIMILG 419
+ G++ A + + T D W ++ G
Sbjct: 581 RTGNLSKAYKFIETLPIAPDATIWGALLCG 610
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 339/645 (52%), Gaps = 79/645 (12%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
K + H+ +L++G + LI YS A V ++ +P +++++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP-DPTIYSFSSLIYAL 91
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + F+ M G++PD + P L K C ++ A K+IH + GLD+D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ ++ + Y++C M +A KVF+ + +DVV +A++ YA+ G + + + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 230 GIWMSRFTVTGVLSALIMMGFFKN-----------------------------------G 254
GI + + G+LS G+ K G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK-------------------GKC---------- 285
R++HG V+K G V++A+IDMYGK G C
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 286 --VGEALEIFEMMEEK----DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
V +ALE+FE+ +E+ ++ SW SI+ Q G L LF M AG +P+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++LPAC ++AAL HGR HG+ V L +D+V + +AL+DMY KCG + +Q
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHL--------LDNVHVGSALIDMYAKCGRINLSQ 443
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+VF M K++ WN ++ G+ M G+ KE + +F + +LKPD ++F +LSAC G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+G ++ +M YG+ P +EHY+C++++LGRAG+L EAY+L MP E + VW L
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L + RL N DLAEIAA+++F LEP + G YVL+SNIY A G + EV IR+ M ++
Sbjct: 564 LNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
KNPGCSWI++K+ ++T ++ D+SHP+ I ++ ++ +R+ G
Sbjct: 624 KNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 69/381 (18%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
++CA + + G++IH +G+ S+ +MY +C +M A VF+ +S
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 95 ------------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
E N+ ++N ++SGF + + + + F
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC-- 182
+ LG PD+ T ++ D + + IHG V K GL D + SA+++ Y K
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 183 ---------QF--------------------MEEALKVFEELPLR----DVVLWNAMVNG 209
QF +++AL++FE + +VV W +++ G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AQ G+ +ALE+FR M G+ + T+ +L A + +GR HG V++
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V +ALIDMY K + + +F MM K++ WNS+M G + +F+ ++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 330 AGFQPDLVTFSTVLPACSHLA 350
+PD ++F+++L AC +
Sbjct: 483 TRLKPDFISFTSLLSACGQVG 503
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + L G+ H + +R ++D+ ++LI+MY+KC ++ + VFN +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ +N++++GF + A + + F + + + PD +F L+ C V E
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 154 KKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
K ++ + G+ + S +VN + ++EA + +E+P D +W A++N
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 340/581 (58%), Gaps = 12/581 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ + ++IH+ +L G+ S IT LI+ S + +A VF++L P VF +NA+
Sbjct: 32 THKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLP-RPQVFPWNAI 90
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I G+ N+ L ++ M+ V PD +TFP L+K C + + + +H VF+LG
Sbjct: 91 IRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGF 150
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVF 223
+ DV++ + L+ Y KC+ + A VFE LPL R +V W A+V+ YAQ GE +ALE+F
Sbjct: 151 EADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIF 210
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+M K + + VL+A + + GR +H V+KMG ++ ++ +L MY K
Sbjct: 211 SQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKC 270
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A +F+ M+ ++ WN++++ + + G + LF M++ +PD ++ ++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAI 330
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ + +L R + Y+ + DDVF+++AL+DM+ KCGS+ A+ VF
Sbjct: 331 SACAQVGSLEQARWMDEYVSRSDYR--------DDVFISSALIDMFAKCGSVECARSVFD 382
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +DV W+ MI+GYG+ GQ +EA+ ++ M + P++VTF+G+L AC+HSG + +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVRE 442
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G F M + + + P +HY C+ID+LGRAG L++AYE+ MP + VW LL+A
Sbjct: 443 GWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H + +L + AAQ++F ++P + G+YV +SN+Y A ++ V ++R M+++ + K+ G
Sbjct: 502 KKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSW+E++ L F D+SHP + I ++ + +RL+E G
Sbjct: 562 CSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 159/318 (50%), Gaps = 1/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC-EP 97
L+ C ++LQ G+ +H+ + R G LI +Y+KC ++ A VF L E
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ A++S + N + L+ F+ MR++ V PD ++ + + + + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K+GL+ + + +L Y KC + A +F+++ +++LWNAM++GYA+ G
Sbjct: 246 ASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAK 305
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+++F M + + ++T +SA +G + R + V + Y V + +ALI
Sbjct: 306 DAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALI 365
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DM+ K V A +F+ ++D+ W++++ + G + L+ M G P+ V
Sbjct: 366 DMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDV 425
Query: 338 TFSTVLPACSHLAALMHG 355
TF +L AC+H + G
Sbjct: 426 TFLGLLIACNHSGMVREG 443
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+++ CA +L++ + + Y+ R+ D ++LI+M++KC ++ A VF+ + +
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDR-TLD 386
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++AMI G+ + A + + + M + GV P+ TF L+ C V E
Sbjct: 387 RDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWF 446
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNG 209
+ ++ + +++ + +++A +V + +P++ V +W A+++
Sbjct: 447 FNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 330/586 (56%), Gaps = 11/586 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L C+ N G++IH +++ G+ + P TSL++MYSKC + A VF+ + +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV-VD 335
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ +NAM++ + ND+ + LD F MRQ VLPD +T +I CC + K +
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSV 395
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H +FK + I SAL+ Y KC +A VF+ + +D+V W ++++G + G+F
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 217 HKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL+VF M + + +T V +A + + G VHG ++K G V V +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LID+Y K AL++F M +++ +WNS+++ + + + ++ LF+ MLS G P
Sbjct: 516 SLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D V+ ++VL A S A+L+ G+ +HGY + G+ D + NAL+DMY KCG
Sbjct: 576 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS--------DTHLKNALIDMYVKCGF 627
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F KM K + +WN+MI GYG G AL +F M +A PD+VTF+ ++SA
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+HSGF+ +G+ M+ YG+ P +EHY ++D+LGRAG L EAY AMP EA+
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W LL+ASR H N +L ++A+++ ++EP YV + N+Y+ G E + M+
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++ + K PGCSWIE+ D + F S S P I+ L+ L + +
Sbjct: 808 EKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 237/494 (47%), Gaps = 21/494 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ C+ TNL G+ IH ++ G P TSL+NMY KC + YA+ VF+ S
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 95 --CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAV 150
+V +N+MI G++ +G+ F M GV PD ++ ++ C
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR 186
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
E K+IHG + + LD D ++ +AL++ Y K +A +VF E+ + +VVLWN M+ G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ G +L+++ + + + TG L A GR +H VVKMG +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+ MY K VGEA +F + +K + WN+++ + + L LF M
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
PD T S V+ CS L +G+ +H + + + + +AL+ +Y
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST--------IESALLTLY 418
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC--EAKLKPDEVT 447
+KCG DA +VF M +KD+ +W +I G +G+ KEAL +F M + LKPD
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
V +AC+ L G + M + G+V + + +ID+ + G A ++ +M
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Query: 508 PNEANPVVWRTLLA 521
E N V W ++++
Sbjct: 538 STE-NMVAWNSMIS 550
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 206/401 (51%), Gaps = 26/401 (6%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE- 193
+TFP L+K C + + K IHG V LG D +I ++LVN Y+KC F++ A++VF+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 194 ------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
+ RDV +WN+M++GY + F + + FRRM G+ F+++ V+S +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 248 MGFFK--NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSW 304
G F+ G+ +HG +++ D+ + ALIDMY K +A +F +E+K ++ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV--TFSTVLPACSHLAALMHGRQIHGYI 362
N ++ G + +L L+ ML+ LV +F+ L ACS GRQIH +
Sbjct: 241 NVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
V GL +D ++ +L+ MY+KCG + +A+ VF+ + K + WN M+ Y
Sbjct: 299 VKMGLH--------NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTI 481
+ G ALD+F M + + PD T V+S CS G + G+ L + TI
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
E + ++ + + G +AY + +M E + V W +L++
Sbjct: 411 E--SALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWGSLISG 448
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
N+ + Q GE+ +AL ++ + W S FT +L A + G+ +HG VV
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE-------KDIFSWNSIMTVHEQCG 315
+G+ + +L++MY K + A+++F+ + +D+ WNS++ + +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH--GRQIHGYIVVNGLAKNGSC 373
+ F RML G +PD + S V+ G+QIHG+++ N L
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT---- 203
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDM 432
D F+ AL+DMY K G DA VF ++ K +V WN+MI+G+G G + +LD+
Sbjct: 204 ----DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH---YTC--V 487
+ +K +F G L ACS S GR+ VV H Y C +
Sbjct: 260 YMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI------HCDVVKMGLHNDPYVCTSL 313
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ M + G + EA E + + +W ++AA
Sbjct: 314 LSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/610 (34%), Positives = 342/610 (56%), Gaps = 14/610 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT L + A +++L G ++H+ ++ G+ +L++MY+KC + +F
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
L ++ T+N MISG N F + L F M++ G+ PD T L+ D+
Sbjct: 307 -LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K++HG + + + +DV++ SALV+ Y KC+ + A V++ DVV+ + M++GY
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A+++FR + ++GI + + VL A M K G+ +H +K Y+
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +AL+DMY K + + IF + KD +WNS+++ Q G + L LF M G
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ VT S+VL AC+ L A+ +G++IHG +V+ G + D+F +AL+DMY K
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHG-VVIKGPIRA-------DLFAESALIDMYGK 597
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ A VF M +K+ SWN +I YG G KE++ + M E K D VTF+ +
Sbjct: 598 CGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+SAC+H+G + +G M Y + P +EH+ C++D+ RAG+L++A EL + MP +
Sbjct: 658 VSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKP 717
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W LL A R+H N +LAEIA+Q +F+L+P + G YVLMSNI G+++ V +R
Sbjct: 718 DAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRR 777
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-----DC 626
M+ V+K PG SW+++ + H F+++D+SHP+++ IY L S+ LRE G D
Sbjct: 778 LMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIPMPDL 837
Query: 627 CAGTLFDSDS 636
C T DS +
Sbjct: 838 CCPTHLDSST 847
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/504 (29%), Positives = 257/504 (50%), Gaps = 19/504 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGI--IDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+A L+ C ++L G ++H + G+ D+ L T L+ MY + + A+ VF++L
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQ-TRLVGMYVLARRFRDAVAVFSSL 101
Query: 94 S--CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCLIKCCCDVMA 149
+N +I G L F+ M LPD +TFP ++K C + A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +H LGLD D+++GSAL+ Y + +A +VF+ + RD VLWN M++G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y + G A+E+F M G + T+ LS G +H + VK G +S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V N L+ MY K KC+ + ++F +M D+ +WN +++ Q G D L LF M
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G +PD VT ++LPA + L G+++HGYIV N C + DVF+ +AL+D+Y
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN-------CVHM-DVFLVSALVDIY 393
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC ++R AQ V+ DV + MI GY ++G +EA+ MF + E ++P+ V
Sbjct: 394 FKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIA 453
Query: 450 GVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL AC+ + G+E +++ Y +E + ++DM + G+L+ ++ + +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYI-FSKI 510
Query: 509 NEANPVVWRTLLAASRLHGNTDLA 532
+ + V W +++++ +G + A
Sbjct: 511 SAKDEVTWNSMISSFAQNGEPEEA 534
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
++ T + L CA + G+EIH +++ I + ++LI+MY KC +++A V
Sbjct: 548 YSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRV 607
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F ++ E N ++N++I+ + + + + HM++ G D TF L+ C
Sbjct: 608 FESMP-EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQ 666
Query: 150 VLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
V E ++ + +++ ++ + + +V+ Y + +++A+++ ++P + D +W A
Sbjct: 667 VQEGLRLFRCMTEEYQIAPRMEHF--ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGA 724
Query: 206 MVNGYAQIGEFHKALEVFRRMSKE 229
+++ H+ +E+ S+E
Sbjct: 725 LLHA----CRVHRNVELAEIASQE 744
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 342/591 (57%), Gaps = 18/591 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C G+ IH+ +++TG++ + +SL+ MY+KC + A+++FN + E +
Sbjct: 113 LKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP-EKD 171
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N +IS +Y + + L++F MR+ G P+ T I C ++ + +IH
Sbjct: 172 VACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHE 231
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G LD +I SALV+ Y KC +E A++VFE++P + VV WN+M++GY G+
Sbjct: 232 ELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSIS 291
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMM----GFFKNGRVVHGIVVKMGYDSGVPVMN 274
+++F+RM EG+ + T+T LS+LIM+ G+ VHG ++ S V + +
Sbjct: 292 CIQLFKRMYNEGV---KPTLT-TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L+D+Y K V A IF+++ + + SWN +++ + G L LF M + +P
Sbjct: 348 SLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEP 407
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D +TF++VL ACS LAAL G +IH I+ L D ++V M AL+DMY KCG+
Sbjct: 408 DAITFTSVLTACSQLAALEKGEEIHNLIIEKKL-------DNNEVVMG-ALLDMYAKCGA 459
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ +A VF + K+D+ SW MI YG GQ AL++F+ M ++ +KPD VTF+ +LSA
Sbjct: 460 VDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSA 519
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C H+G + +G + M + YG++P +EHY+C+ID+LGRAG+L+EAYE+ P + V
Sbjct: 520 CGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDV 579
Query: 515 -VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ TL +A RLH N DL A+ + +P Y+L+SN+Y + K++EV +R M
Sbjct: 580 ELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKM 639
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++ ++KNPGCSWIE+ + F D SH + ++ L L+ + +
Sbjct: 640 KELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDES 690
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 272/496 (54%), Gaps = 13/496 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + +L++G+ IH ++ G+ + +LIN+Y C +A VF+N+
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCE 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +N +++G+ N + L+ F + L PD YT+P ++K C + + K IH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GL +D+ +GS+LV Y KC E+A+ +F E+P +DV WN +++ Y Q G F
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+ALE F M + G + T+T +S+ + G +H ++ G+ + +AL+
Sbjct: 190 EALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMYGK + A+E+FE M +K + +WNS+++ + G+ ++LF RM + G +P L
Sbjct: 250 DMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLT 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+++ CS A L+ G+ +HGY + N + DVF+N++LMD+Y KCG +
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ--------SDVFINSSLMDLYFKCGKVEL 361
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ +F + K V SWN+MI GY +G+ EAL +FS M ++ ++PD +TF VL+ACS
Sbjct: 362 AENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQ 421
Query: 458 SGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L +G E L +E + + ++DM + G ++EA+ + +P + V W
Sbjct: 422 LAALEKGEEIHNLIIEKKLDNNEVV--MGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSW 478
Query: 517 RTLLAASRLHGNTDLA 532
+++ A HG +A
Sbjct: 479 TSMITAYGSHGQAYVA 494
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 169/325 (52%), Gaps = 4/325 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T I+S CA +L +G EIH ++ +G + ++L++MY KC ++ A+ VF
Sbjct: 209 TITTAISS---CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVF 265
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + V +N+MISG+ + + F M GV P T LI C +
Sbjct: 266 EQMP-KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARL 324
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
LE K +HG + + DV+I S+L++ Y KC +E A +F+ +P VV WN M++GY
Sbjct: 325 LEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGY 384
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G+ +AL +F M K + T T VL+A + + G +H ++++ D+
Sbjct: 385 VAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNE 444
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
VM AL+DMY K V EA +F+ + ++D+ SW S++T + G L LF ML +
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQS 504
Query: 331 GFQPDLVTFSTVLPACSHLAALMHG 355
+PD VTF +L AC H + G
Sbjct: 505 NMKPDRVTFLAILSACGHAGLVDEG 529
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 199/391 (50%), Gaps = 12/391 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR- 198
L++ C + ++ + K IH V LGL D+++ L+N YL C + A VF+ +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRR-MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
++ LWN ++ GY + + +ALE+F + + + +T VL A + + G+++
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMI 128
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +VK G + V ++L+ MY K +A+ +F M EKD+ WN++++ + Q GN
Sbjct: 129 HTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L F M GF+P+ VT +T + +C+ L L G +IH ++ +G +
Sbjct: 189 KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF--------LL 240
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D F+++AL+DMY KCG + A VF +M KK V +WN MI GYG+ G + +F M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMY 300
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+KP T ++ CS S L +G+ F+ R + + + ++D+ + G++
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGK-FVHGYTIRNRIQSDVFINSSLMDLYFKCGKV 359
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGN 528
A + +P ++ V W +++ G
Sbjct: 360 ELAENIFKLIP-KSKVVSWNVMISGYVAEGK 389
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/599 (34%), Positives = 337/599 (56%), Gaps = 16/599 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF T L+L + +H+ + + G + T+LI+ Y+ C + A
Sbjct: 40 NPFVFTTI---LKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSAR 96
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F+ ++C+ ++ ++ M++ + ND L F MR +G P+ +TF ++K C +
Sbjct: 97 QAFDAIACK-DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGL 155
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A K +HG V K ++D+Y+G L++ Y K + L+VFEE+P DV+ W+ M+
Sbjct: 156 EAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMI 215
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ YAQ + +A+E+F +M + + ++FT VL + + + G+ VH V+K+G D
Sbjct: 216 SRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLD 275
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V NAL+D+Y K + ++++F + ++ +WN+++ + Q G+ D L L+ M
Sbjct: 276 GNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNM 335
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI--DDVFMNNAL 385
L Q VT+S+VL AC+ LAA+ G QIH S K I DV + NAL
Sbjct: 336 LECQVQASEVTYSSVLRACASLAAMELGTQIHSL----------SLKTIYDKDVVVGNAL 385
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCGS+++A++VF +S++D SWN MI GY M G EAL F M E + P++
Sbjct: 386 IDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNK 445
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TFV +LSACS++G L G+ + M YG+ P +EHYTC++ +LGR+G L++A +L
Sbjct: 446 LTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIE 505
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+P E N VWR LL A +H + DL ++AQ++ Q++P +VL+SNIY ++
Sbjct: 506 EIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNS 565
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V +R M+ + V+K PG SWIE + +H F D SHP+ K I L L + + G
Sbjct: 566 VASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAG 624
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 224/433 (51%), Gaps = 12/433 (2%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ N ++ +I G+ + + +D F+ + + G + + F ++K V
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H ++KLG + + ++G+AL++ Y C + A + F+ + +D+V W MV YA+
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
F +L++F M G + FT GVL A I + F G+ VHG V+K Y+ + V
Sbjct: 123 FQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG 182
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+D+Y K + L +FE M + D+ W+ +++ + Q + LF +M A P+
Sbjct: 183 LLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPN 242
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF++VL +C+ + L G+Q+H +++ GL N VF++NALMD+Y KCG +
Sbjct: 243 QFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGN--------VFVSNALMDVYAKCGRL 294
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
++ +F ++ ++ +WN MI+GY G G +AL ++ M E +++ EVT+ VL AC
Sbjct: 295 DNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRAC 354
Query: 456 SHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ + G + L +++ Y + + +IDM + G + A L M +E + +
Sbjct: 355 ASLAAMELGTQIHSLSLKTIYDKDVVVGN--ALIDMYAKCGSIKNA-RLVFDMLSERDEI 411
Query: 515 VWRTLLAASRLHG 527
W +++ +HG
Sbjct: 412 SWNAMISGYSMHG 424
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 173/338 (51%), Gaps = 10/338 (2%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R+ V + ++ GY Q + + +++F R+ +EG ++ F T +L L+ + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+H + K+G++S V ALID Y V A + F+ + KD+ SW ++ + +
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+L+LF M GF P+ TF+ VL AC L A G+ +HG ++ +C
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVL-------KTCY 173
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
++ D+++ L+D+YTK G D VF +M K DV W+ MI Y Q +EA+++F
Sbjct: 174 EM-DLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFG 232
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M A + P++ TF VL +C+ L G++ + + G+ + ++D+ +
Sbjct: 233 QMRRAFVLPNQFTFASVLQSCASIENLQLGKQ-VHCHVLKVGLDGNVFVSNALMDVYAKC 291
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G+L+ + +L + +PN N V W T++ G+ D A
Sbjct: 292 GRLDNSMKLFMELPNR-NEVTWNTMIVGYVQSGDGDKA 328
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/597 (33%), Positives = 342/597 (57%), Gaps = 14/597 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT + + S C+ + + +++H+++L++ ++ +LI+MY+K QM A+ V
Sbjct: 200 FTFGSIVKS---CSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVM 148
F+ + + ++ ++ +MI+GF + + L F M V P+++ F C ++
Sbjct: 257 FSRIIIK-DLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++IHGL K GL D++ G +L + Y KC F+E A VF + D+V WNA++
Sbjct: 316 EPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIA 375
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A + ++ F +M G+ + TV +L A +G VH +VKMG++
Sbjct: 376 GFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+PV N+L+ MY K + +AL++FE + K DI SWN+++T Q LRL M
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
++ +PD VT + VL + +A+ G QIH +I+ +GL D+ ++NAL++
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL--------DISVSNALIN 547
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MYTKCGS+ A+ +F + D+ SW+ +I+GY G GKEA ++F M +KP+E+T
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEIT 607
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVG+L+ACSH G + +G + M+ Y + PT EH +C++D+L RAG L+ A + M
Sbjct: 608 FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQM 667
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + VVW+TLLAA ++HGN ++ + AA+ V +++P + V++ NI+ + G +++
Sbjct: 668 PFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFA 727
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R +MR+ +V K PG SWIE+KD +H F++ D HPE IY L L ++ + G
Sbjct: 728 RLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDG 784
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 261/561 (46%), Gaps = 23/561 (4%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T + C+ +L+ G++IH +ML + +++MY KC +K A
Sbjct: 95 PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARN 154
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+++ + NV ++ +MISG+ + + M + G +PD +TF ++K C +
Sbjct: 155 MFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+++H V K D+ +AL++ Y K M +A+ VF + ++D++ W +M+
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G++Q+G +AL FR M + ++ + F SA + GR +HG+ +K G
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + +L DMY K + A +F +E+ D+ +WN+I+ N + F +M
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G P+ VT ++L ACS L HG Q+H YIV G D+ + N+L+
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL--------DIPVCNSLLS 445
Query: 388 MYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY+KC ++ DA VF + +K D+ SWN ++ Q E L + M +++KPD V
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHV 505
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VL + G + + + G+ I +I+M + G L A ++ +
Sbjct: 506 TLTNVLVSSGQIASYEVGSQIHCFI-MKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564
Query: 507 MPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG---G 561
+ N + + W +L+ A G R ++P N + I A G
Sbjct: 565 IGN-PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKP----NEITFVGILTACSHIG 619
Query: 562 KYEEVLDIRHTMRQQNVRKNP 582
EE L + TM Q++ R +P
Sbjct: 620 MVEEGLKLYRTM-QEDYRISP 639
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 18/451 (3%)
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
A K D F + YT LI C + ++ +KIH + D+ + +
Sbjct: 81 ALKAFDIFQKCSSSPLKSVTYTH--LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
+++ Y KC ++EA +F+ +PL++VV W +M++GY++ GE A+ ++ +M + G
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
FT ++ + + FK R +H V+K + + + NALI MY K + +A+ +F
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
+ KD+ SW S++ Q G L F MLS +QP+ F + ACS L
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GRQIHG + GL D+F +L DMY KCG + A+ VF + K D+ +W
Sbjct: 319 CGRQIHGLCIKFGLG--------SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I G+ KE+ FS M L P++VT + +L ACS L+ G + +
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI-V 429
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G I ++ M + LN+A ++ + N+A+ V W TLL A
Sbjct: 430 KMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVL 489
Query: 534 IAAQRVF--QLEPGHCGNYVLMSNIYVAGGK 562
+ +F +++P H V ++N+ V+ G+
Sbjct: 490 RLTKLMFASRIKPDH----VTLTNVLVSSGQ 516
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/585 (36%), Positives = 331/585 (56%), Gaps = 22/585 (3%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KG+++H Y +RTG+ D+ +++ LINMY+KC + +A VF L + + ++N+MI+
Sbjct: 119 RKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFG-LMVDKDSVSWNSMIT 177
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N + +N MR+ G++P + + C + +L ++ HG KLGLD+
Sbjct: 178 GLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDM 237
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG-EFHKALEVFRRM 226
DV + + L+ Y + + E KVF + RD V WN ++ A G +A+EVF M
Sbjct: 238 DVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEM 297
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +R T +L+ + + K +H +++K + NAL+ YGK +
Sbjct: 298 MRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEM 357
Query: 287 GEALEIFEMM-EEKDIFSWNSIMT--VHEQ--CGNHDGTLRLFDRMLSAGFQPDLVTFST 341
EIF M E +D SWNS+++ +H + C D L M+ G + D TF+T
Sbjct: 358 ENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMD----LVWLMMQRGQRLDCFTFAT 413
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC+ +A L G ++H + L DV + +AL+DMY+KCG + A
Sbjct: 414 VLSACATVATLECGMEVHACAIRACLES--------DVVIGSALVDMYSKCGRIDYASRF 465
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F M +++ SWN MI GY G G AL +F+ M + PD +TFVGVLSACSH G +
Sbjct: 466 FNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLV 525
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G E+ M YG+VP +EHY+C++D+LGRAG+L++ MP + N ++WRT+L
Sbjct: 526 DEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLG 585
Query: 522 A-SRLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
A R +G T+L AA+ +F ++P + NYVL+SN+Y +GGK+E++ R MR+ V+
Sbjct: 586 ACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVK 645
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K GCSW+ +KDG+H F++ D SHPE IYA+L L ++R+ G
Sbjct: 646 KEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAG 690
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 227/482 (47%), Gaps = 15/482 (3%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H +L+ G +LIN+Y + A +F+ + + N T+ +ISG+ N
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMP-DRNGVTWACLISGYTQNGM 81
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGL-DLDVYIG 172
M G LP+++ F I+ C + M +++HG + GL D V +G
Sbjct: 82 PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVG 141
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ L+N Y KC ++ A VF + +D V WN+M+ G Q F A++ + M K G+
Sbjct: 142 NGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLM 201
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
S F + LS+ +G G+ HG +K+G D V V N L+ +Y + + E ++
Sbjct: 202 PSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKV 261
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F M E+D SWN+++ G + +F M+ AG+ P+ VTF +L S L+
Sbjct: 262 FSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLST 321
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDV 410
QIH I+ + DD + NAL+ Y K G M + + +F++MS ++D
Sbjct: 322 SKLSHQIHALILKYNVK--------DDNAIENALLACYGKSGEMENCEEIFSRMSERRDE 373
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI GY + +A+D+ M + + D TF VLSAC+ L G E +
Sbjct: 374 VSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME-VHA 432
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
R + + + ++DM + G+++ A MP N W ++++ HG+ D
Sbjct: 433 CAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARHGHGD 491
Query: 531 LA 532
A
Sbjct: 492 NA 493
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 205/425 (48%), Gaps = 20/425 (4%)
Query: 12 SSCFNFSTSSGN---QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
+ CF + S N +T P A I++L CA + GQ+ H ++ G +D +
Sbjct: 182 NKCFEDAVKSYNSMRKTGLMPSNFAL-ISALSSCASLGCILLGQQTHGEGIKLG-LDMDV 239
Query: 69 SIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMR 126
S++ +L+ +Y++ ++ VF+ + E + ++N +I + + + ++ F M
Sbjct: 240 SVSNTLLALYAETSRLAECQKVFSWM-LERDQVSWNTVIGALADSGASVSEAIEVFLEMM 298
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ G P++ TF L+ + +IH L+ K + D I +AL+ Y K ME
Sbjct: 299 RAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEME 358
Query: 187 EALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
++F + RD V WN+M++GY KA+++ M + G + FT VLSA
Sbjct: 359 NCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSAC 418
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + G VH ++ +S V + +AL+DMY K + A F +M ++++SWN
Sbjct: 419 ATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWN 478
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV-V 364
S+++ + + G+ D LRLF RM +G PD +TF VL ACSH+ + G + + V
Sbjct: 479 SMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEV 538
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMD 423
GL + V + ++D+ + G + + KM K ++ W +LG
Sbjct: 539 YGL--------VPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRT-VLGACCR 589
Query: 424 GQGKE 428
G G++
Sbjct: 590 GNGRK 594
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 339/591 (57%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TCI L +CA + N G ++H ++ +G P +L+ MYSKC + YA +FN +
Sbjct: 217 TCI--LSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTM 274
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T+N +I+G+ N F + FN M GV PD TF + + ++
Sbjct: 275 P-QTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 333
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + + + DVY+ SAL++ Y K +E A K+F++ L DV + AM++GY
Sbjct: 334 KEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLH 393
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G A+ FR + +EG+ + T+ VL A + K G+ +H ++K ++ V V
Sbjct: 394 GLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVG 453
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+A+ DMY K + A E F M ++D WNS+++ Q G + + LF +M +G +
Sbjct: 454 SAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAK 513
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D V+ S+ L A ++L AL +G+++HGY++ N + D F+ + L+DMY+KCG
Sbjct: 514 FDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSS--------DTFVASTLIDMYSKCG 565
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ A VF M K+ SWN +I YG G +E LD++ M A + PD VTF+ ++S
Sbjct: 566 NLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIIS 625
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC H+G + +G + M YG+ +EHY C++D+ GRAG+++EA++ +MP +
Sbjct: 626 ACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDA 685
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW TLL A RLHGN +LA++A++ + +L+P + G YVL+SN++ G++ VL +R M
Sbjct: 686 GVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLM 745
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ V+K PG SWI++ G H F ++D +HPE+ IY L SL LR+ G
Sbjct: 746 KEKGVQKIPGYSWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQG 796
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 260/504 (51%), Gaps = 14/504 (2%)
Query: 31 TLATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+L T + SL + C+ + +Q+ +++H+ ++ G+ D + ++ +Y C + + A +
Sbjct: 9 SLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNL 68
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L +N MI G Y + L F+ M V PDKYTFP +IK C +
Sbjct: 69 FFELELR-YALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNN 127
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V +H LG +D++ GSAL+ Y ++ +A +VF+ELPLRD +LWN M+ G
Sbjct: 128 VPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRG 187
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y + G+F A+ F M ++ T T +LS G F G +HG+V+ G++
Sbjct: 188 YVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFD 247
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V N L+ MY K + A ++F M + D +WN ++ + Q G D LF+ M+S
Sbjct: 248 PQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 307
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
AG +PD VTF++ LP+ +L H +++H YIV + + DV++ +AL+D+Y
Sbjct: 308 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF--------DVYLKSALIDVY 359
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K G + A+ +F + DVA MI GY + G +A++ F + + + + +T
Sbjct: 360 FKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMA 419
Query: 450 GVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL AC+ L G+E +++ R + + + + DM + G+L+ AYE M
Sbjct: 420 SVLPACAAVAALKPGKELHCHILKKRLENIVNVG--SAITDMYAKCGRLDLAYEFFRRM- 476
Query: 509 NEANPVVWRTLLAASRLHGNTDLA 532
++ + V W +++++ +G ++A
Sbjct: 477 SDRDSVCWNSMISSFSQNGKPEIA 500
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 331/604 (54%), Gaps = 16/604 (2%)
Query: 10 PFSSCFNFSTSSGNQT-FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
P +F S +QT F HP T + SL C+ + + +IHS ++ T ++ P
Sbjct: 9 PLHPNLSFFKSHYHQTPFLHPLT---SLNSLLNCSRTS--KHATQIHSQLITTALLSLPF 63
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCE-PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+L+N+Y+KC + L +F++ + NV ++ ++I+ FK L FFNHMR+
Sbjct: 64 LFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRR 123
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV P+ YTF ++ C D A + +++H LV+K G +V++ SALV+ Y KC M
Sbjct: 124 SGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLM 183
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW-MSRFTVTGVLSALI 246
A KVFEE+P+R++V WN M+ G+ Q + +A+ F+ + E + + + + V SA
Sbjct: 184 AEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACA 243
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G + G+ VHG+ +K+G + V + N+L DMYGK + ++F +D+ +WN
Sbjct: 244 NAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNI 303
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + N++ F M G PD ++S+VL +C++LAAL G IH I+ +G
Sbjct: 304 MIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSG 363
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
KN + + ++L+ MY KCGS+ DA +F + ++V W +I G
Sbjct: 364 FVKN--------LRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHA 415
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+++F M +KPD +TFV VLSACSH+G + +G + M +G+ P EHY C
Sbjct: 416 NWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYAC 475
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+L RAG+L+ A MP + + VW LL+A R H N + + A ++F LEP +
Sbjct: 476 IVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDN 535
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
GNYVL+ NI G E ++R M VRK PGCSWI++K+ + F D+SH +
Sbjct: 536 PGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKT 595
Query: 607 KSIY 610
K IY
Sbjct: 596 KEIY 599
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 341/656 (51%), Gaps = 64/656 (9%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
+ S + N TF PF + C ++++ G+ H+ L TG I + +L+
Sbjct: 120 SLSWTPDNYTF--PFVF-------KACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDK 134
MYS+C + A VF+ +S +V ++N++I + L+ F+ M + G PD
Sbjct: 171 MYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN 229
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
T ++ C + K++H + ++++G+ LV+ Y KC M+EA VF
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM--------------------- 233
+ ++DVV WNAMV GY+QIG F A+ +F +M +E I M
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 234 --------------SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-------GYDSGVPV 272
+ T+ VLS +G +G+ +H +K G+ V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 273 MNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+N LIDMY K K V A +F+ + +E+D+ +W ++ + Q G+ + L L M
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 331 GFQ--PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
Q P+ T S L AC+ LAAL G+QIH Y + N ++ +F++N L+DM
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ-------QNAVPLFVSNCLIDM 522
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ DA++VF M K+ +W ++ GYGM G G+EAL +F M K D VT
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTL 582
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL ACSHSG + QG E+ M++ +GV P EHY C++D+LGRAG+LN A L MP
Sbjct: 583 LVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E PVVW L+ R+HG +L E AA+++ +L H G+Y L+SN+Y G++++V
Sbjct: 643 MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTR 702
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR MR + V+K PGCSW+E G TF D++HP AK IY L R+++ G
Sbjct: 703 IRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 253/519 (48%), Gaps = 52/519 (10%)
Query: 54 IHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYS 111
IH +L GI+ L++TS LI+ Y + +A+ + + V+ +N++I +
Sbjct: 47 IHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A K L F M L PD YTFP + K C ++ +V + H L G +V++
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-G 230
G+ALV Y +C+ + +A KVF+E+ + DVV WN+++ YA++G+ ALE+F RM+ E G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
T+ VL +G G+ +H V + V N L+DMY K + EA
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR------------------------ 326
+F M KD+ SWN+++ + Q G + +RLF++
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 327 -----------MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSC 373
MLS+G +P+ VT +VL C+ + ALMHG++IH Y + L KNG
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEALD 431
D+ + N L+DMY KC + A+ +F +S K DV +W +MI GY G +AL+
Sbjct: 405 ---DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 432 MFSCMCE--AKLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVI 488
+ S M E + +P+ T L AC+ L G++ + ++ VP C+I
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLI 520
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
DM + G +++A L N V W +L+ +HG
Sbjct: 521 DMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHG 558
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/579 (36%), Positives = 312/579 (53%), Gaps = 10/579 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L + ++ H +LR G+ I L+ +YA VF + PN+F YN +I
Sbjct: 15 SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQ-TPHPNIFLYNTLI 73
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-KIHGLVFKLGL 165
G SND + + MRQ G PD +TFP ++K C + V +H LV K G
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D DV++ + LV Y K F+ +A KVF+E+P ++VV W A++ GY + G F +AL +FR
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
+ + G+ FT+ +L A +G +GR + G + + G V V +L+DMY K
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ EA +F+ M EKD+ W++++ + G L +F M +PD V A
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSA 313
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L AL G G + + N + AL+D Y KCGS+ A+ VF M
Sbjct: 314 CSRLGALELGNWARGLMDGDEFLSN--------PVLGTALIDFYAKCGSVAQAKEVFKGM 365
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+KD +N +I G M G A +F M + ++PD TFVG+L C+H+G + G
Sbjct: 366 RRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGH 425
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M S + V PTIEHY C++D+ RAG L EA +L +MP EAN +VW LL RL
Sbjct: 426 RYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRL 485
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
H +T LAE +++ +LEP + G+YVL+SNIY A +++E IR ++ Q+ ++K PGCS
Sbjct: 486 HKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCS 545
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
W+E+ +H F+ D SHP + IY +L SL LRE G
Sbjct: 546 WVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAG 584
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ +L G+ I YM +G + + TSL++MY+KC M+ A VF+ +
Sbjct: 205 TLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGM 264
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++A+I G+ SN + LD F M++ V PD Y + C + A+
Sbjct: 265 -VEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELG 323
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
GL+ + +G+AL++ Y KC + +A +VF+ + +D V++NA+++G A
Sbjct: 324 NWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMC 383
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G A VF +M K G+ T G+L G +G R G+ +
Sbjct: 384 GHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEH 443
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ + + EA ++ M E + W +++
Sbjct: 444 YGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALL 480
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/571 (34%), Positives = 330/571 (57%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH+ + G + +SLI+ YS C + +A VF+ + + V T+ AM+S + ND
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAV-TWTAMVSCYSEND 230
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L+ F+ MR G P+ + ++K + + + K IHG K D + ++G
Sbjct: 231 IPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGG 290
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y KC ++E+A VFE +P DV+LW+ +++ YAQ + +A E+F RM + +
Sbjct: 291 ALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVP 350
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ F+++GVL A + F G+ +H +V+K+GY+S + V NAL+D+Y K + + +LEIF
Sbjct: 351 NEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIF 410
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + + SWN+I+ + Q G + L +F M +A VTFS+VL AC++ A++
Sbjct: 411 RSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIK 470
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
H QIH I + +D + N+L+D Y KCG +RDA VF + + DV SW
Sbjct: 471 HTVQIHSLIEKSTFN--------NDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSW 522
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY + G+ +AL++F+ M ++ KP++VTFV +LS C +G ++QG M
Sbjct: 523 NAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTM 582
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ + P+++HYTC++ +LGRAG+LN+A + +P+ +P+VWR LL++ +H N L +
Sbjct: 583 DHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGK 642
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A++V ++EP YVL+SN+Y A G ++V +R +MR V+K G SW+E+K +
Sbjct: 643 FSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEV 702
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ + I A L L + G
Sbjct: 703 HAFSVGSADHPDMRIINAMLEWLNLKASREG 733
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 248/504 (49%), Gaps = 14/504 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS--PLSITSLINMYSKCCQMKYALFVFN 91
C LQ C + + + G+ +H+ +++ G + L+N+Y+K + A +F+
Sbjct: 49 ACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFD 108
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E N+ ++ ++ G+ + F +++ G + + ++K + A
Sbjct: 109 GMP-ERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPG 167
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
IH KLG D + ++GS+L++ Y C + A VF+ + +D V W AMV+ Y+
Sbjct: 168 LTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYS 227
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ AL F +M G + F +T VL A + + G+ +HG VK D+
Sbjct: 228 ENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPH 287
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMY K + +A +FE++ D+ W+ +++ + Q ++ +F RM+ +
Sbjct: 288 VGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSS 347
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ + S VL AC+++A L G+QIH ++ G ++F+ NALMD+Y K
Sbjct: 348 VVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYES--------ELFVGNALMDVYAK 399
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C +M ++ +F + + SWN +I+GY G ++AL +F M A + +VTF V
Sbjct: 400 CRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSV 459
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+++ + + L+E TI + +ID + G + +A ++ ++ +
Sbjct: 460 LRACANTASIKHTVQIHSLIEKSTFNNDTIVCNS-LIDTYAKCGCIRDALKVFESII-QC 517
Query: 512 NPVVWRTLLAASRLHGN-TDLAEI 534
+ V W +++ LHG TD E+
Sbjct: 518 DVVSWNAIISGYALHGRATDALEL 541
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 193/392 (49%), Gaps = 16/392 (4%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG--LDLDVYIGSALVNTYLKCQFMEEALK 190
D Y L++ C + +H V + G LD + + L+N Y K + A +
Sbjct: 46 DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F+ +P R++V + +V GYA G F +A +FRR+ +EG ++ F +T +L L+ M
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+H K+G+D V ++LID Y V A +F+ + KD +W ++++
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + + L F +M AG +P+ ++VL A L++ + G+ IHG V
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAV------- 278
Query: 371 GSCKDIDDV--FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
K + D + AL+DMY KCG + DA+ VF + DV W+ +I Y Q ++
Sbjct: 279 ---KTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQ 335
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A +MF M + + P+E + GVL AC++ FL G++ L+ + G + ++
Sbjct: 336 AFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLV-IKLGYESELFVGNALM 394
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
D+ + + + E+ ++ +AN V W T++
Sbjct: 395 DVYAKCRNMENSLEIFRSL-RDANEVSWNTII 425
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 177/331 (53%), Gaps = 10/331 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF L T + +C L KG IH ++T P +L++MY+KC ++ A
Sbjct: 250 NPFVL-TSVLKAAVCLSSAVLGKG--IHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDAR 306
Query: 88 FVFNNLSCEPNVFTYNAMISGF---YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
VF + +V ++ +IS + Y N+ AF + F M + V+P++++ +++ C
Sbjct: 307 TVFEIIP-HDDVILWSFLISRYAQSYQNEQAF---EMFLRMMRSSVVPNEFSLSGVLQAC 362
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+V + ++IH LV KLG + ++++G+AL++ Y KC+ ME +L++F L + V WN
Sbjct: 363 ANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWN 422
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ GY Q G AL VF+ M + ++ T + VL A K+ +H ++ K
Sbjct: 423 TIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS 482
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+++ V N+LID Y K C+ +AL++FE + + D+ SWN+I++ + G L LF
Sbjct: 483 TFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELF 542
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+RM + +P+ VTF +L C + G
Sbjct: 543 NRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 131/294 (44%), Gaps = 18/294 (6%)
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM--NALIDMYGKGKCVGEAL 290
+ + +L I G + GR VH VV+ G + + N L+++Y K + A
Sbjct: 45 LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ M E+++ S+ +++ + G + LF R+ G + + +T+L +
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMD 164
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
A IH G +N F+ ++L+D Y+ CG++ A+ VF + KD
Sbjct: 165 APGLTCCIHACACKLGHDRNA--------FVGSSLIDAYSLCGAVSHARCVFDGIIWKDA 216
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA--CSHSGFLSQGREFL 468
+W M+ Y + ++AL+ FS M A KP+ VL A C S L +G
Sbjct: 217 VTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGC 276
Query: 469 PLMESRYGVVPTIEHY-TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ + T H ++DM + G + +A + +P++ + ++W L++
Sbjct: 277 AVKT----LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD-DVILWSFLIS 325
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T + L+ CA+ +++ +IHS + ++ + + SLI+ Y+KC ++ AL VF
Sbjct: 452 TQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVF 511
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
++ + +V ++NA+ISG+ + A L+ FN M + P+ TF L+ C V
Sbjct: 512 ESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLV 570
Query: 151 ---LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
L + + ++ +D Y + +V + + +ALK ++P ++W A+
Sbjct: 571 NQGLSLFNSMTMDHRIKPSMDHY--TCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRAL 628
Query: 207 -----VNGYAQIGEF--HKALEVFRRMSKEGIWMSR-FTVTGVLSALIMM 248
V+ +G+F K LE+ + + +S + G+L + ++
Sbjct: 629 LSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALL 678
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/619 (34%), Positives = 335/619 (54%), Gaps = 52/619 (8%)
Query: 30 FTLATCIASLQLCAH----QTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMK 84
FT + + LC +++ +++HS + + + +P L+ Y+ C +
Sbjct: 29 FTQQNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPW 88
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+F+ + + NV +N MI + +N L F +M G+ PD YT+PC++K
Sbjct: 89 STRHIFDEIP-KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKAS 147
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ +IH V ++GLDL+V++G+ L++ Y KC + EA +V +++P RDVV WN
Sbjct: 148 SGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWN 207
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++V G A+ G+F ALEV + M G+ T+ +L A
Sbjct: 208 SLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPA-------------------- 247
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
V N +D V E+F + K + SWN ++ V+ + +F
Sbjct: 248 -------VTNTCLDN------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF 294
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+M PD ++ ++VLPAC L+AL+ GR+IH Y+V L N + + NA
Sbjct: 295 LQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN--------LLLENA 346
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY KCG + A+ VF +M +DV SW MI YGM+G+G++A+ +FS M + L PD
Sbjct: 347 LIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPD 406
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ FV VLSACSH+G L +GR + LM +VP IEH+ C++D+LGRAGQ++EAY
Sbjct: 407 SIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFI 466
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP E N VW LL+A R++ N + +AA ++FQL P G YVL+SNIY G++E
Sbjct: 467 KQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWE 526
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V +R M+ + ++K PG S EL + +HTF++ D+SHP++K IY EL +++E
Sbjct: 527 DVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVGKMKE-- 584
Query: 625 DCCAGTLFDSDSTASGFEK 643
AG + ++DS E+
Sbjct: 585 ---AGYVPETDSALHDVEE 600
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 352/661 (53%), Gaps = 67/661 (10%)
Query: 2 LSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
L K + ++ S + STSS FT +CI L+ C ++Q ++I + +LRT
Sbjct: 9 LFKFTSLHFLSKPLHLSTSSH-------FTKKSCIFLLKNCK---SMQHLKQIQTQILRT 58
Query: 62 GIIDSPLSITSLINMYSKCC------QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
G S +N + CC + YA +FN + P +F YN +I F N
Sbjct: 59 GFHQS----GDTLNKFMVCCTDPSIGNLHYAERIFNYIDI-PGLFIYNLVIKAFTKNGSF 113
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
K + F +R+ G+ PD +T+P + K + V E +K++G V K GL+ D Y+ ++L
Sbjct: 114 RKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSL 173
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMS 234
++ Y + ++ +VFEE+P RDVV WN +++GY + + A++VFRRM ++ + +
Sbjct: 174 MDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPN 233
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
TV LSA I + + G+ +H V ++G+ + + NAL+DMY K + A EIF
Sbjct: 234 EATVVSTLSACIALKMLELGKEIHRYVREQLGFT--IKIGNALVDMYCKCGHLSIAREIF 291
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------MLSAGFQ--------- 333
M K + W S+++ + CG D LF+R M++ Q
Sbjct: 292 NDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVA 351
Query: 334 -----------PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
PD T +L C+ L L G+ IHGYI N K + D +
Sbjct: 352 LFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDEN--------KIMIDAVVG 403
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
AL++MY KCG + + +F + +KD ASW +I G M+G+ +AL++F+ M + +K
Sbjct: 404 TALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVK 463
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD++TF+GVLSACSH G + +GR+ M + Y + P +EHY C+ID+LGRAGQL+EA E
Sbjct: 464 PDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEE 523
Query: 503 LALAMPNEANPVV---WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
L PN N V+ + LL+A R HGN ++ E A+R+ +E G + L++NIY +
Sbjct: 524 LIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYAS 583
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
++E+V +R M+ V+K PGCS +E+ +H F+ D SHPE + IY+ L S+
Sbjct: 584 ADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDASHPEMREIYSMLDSIAKP 643
Query: 620 L 620
L
Sbjct: 644 L 644
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/598 (34%), Positives = 336/598 (56%), Gaps = 12/598 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYAL 87
P T I L + A +L+ G++IH ++R G D +S+ S INMY K + YA
Sbjct: 294 PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW-DQFVSVANSAINMYVKAGSVNYAR 352
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F + E ++ ++N +ISG + L F + + G+LPD++T +++ C +
Sbjct: 353 RMFGQMK-EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSL 411
Query: 148 MAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
V +++H K G+ LD ++ +AL++ Y K MEEA +F D+ WNAM
Sbjct: 412 EESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAM 471
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ + +AL +F M + G + T A + + G+ +H +V+KM +
Sbjct: 472 MHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRF 531
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V++ ++DMY K + A ++F + D +W ++++ + G + L + +
Sbjct: 532 HYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQ 591
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M AG QPD TF+T++ ACS L AL G+QIH I+ A D F+ +L+
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF--------DPFVMTSLV 643
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG++ DA +F +M+ + VA WN MI+G G +EAL+ F+ M + PD V
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+GVLSACSHSG S + M+ YGV P IEHY+C++D L RAG + EA ++ +
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP EA+ ++RTLL A R+ G+ + E A+++F ++P YVL+SNIY A ++E
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ R+ M++ NV+K PG SWI++K+ +H F++ DRSH E IY ++ + R++E G
Sbjct: 824 VSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEG 881
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 236/500 (47%), Gaps = 49/500 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+LC + + + Y ++ G+ +L+N+Y+K +++ A +F+ + +
Sbjct: 129 FKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR-D 187
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N M+ + + L F+ + G+ PD C V +L
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD----------CVSVRTIL------- 230
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+G +G V Q A K+F DV +WN ++ Y Q GE +
Sbjct: 231 ----MG------VGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWE 280
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A++ FR M K + T +LS + + + G+ +HG VV+ G+D V V N+ I+
Sbjct: 281 AVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAIN 340
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V A +F M+E D+ SWN++++ + G + +LRLF +L +G PD T
Sbjct: 341 MYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400
Query: 339 FSTVLPACSHL-AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
++VL ACS L + GRQ+H + G+ + D F++ AL+D+Y+K G M +
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGI--------VLDSFVSTALIDVYSKGGKMEE 452
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+++F D+ASWN M+ G+ + +EAL +FS M E K D++TF A
Sbjct: 453 AELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGC 512
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHY-----TCVIDMLGRAGQLNEAYELALAMPNEAN 512
L QG++ + V+ HY + ++DM + G++ A ++ +P+ +
Sbjct: 513 LVRLQQGKQIHAV------VIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPS-PD 565
Query: 513 PVVWRTLLAASRLHGNTDLA 532
V W T+++ +G + A
Sbjct: 566 DVAWTTVISGCVENGEEEQA 585
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 164/377 (43%), Gaps = 47/377 (12%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYA 211
K+ H ++ GL+ D Y+ + L+ Y KC + A K+F+ P RD+V +NA++ YA
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYA 92
Query: 212 QIGEFH------KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
GE H +A +FR + + + +R T++ + ++ G + G VK+G
Sbjct: 93 HTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIG 152
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
V V AL+++Y K + + EA +F+ M +D+ WN +M + + G D L LF
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFS 212
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHG-RQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+G +PD V+ T+L Q+ Y
Sbjct: 213 AFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAY----------------------- 249
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
A +F DV WN + Y G+G EA+D F M ++++ D
Sbjct: 250 -------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCD 296
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+T++ +LS + L G++ + R+G + I+M +AG +N A +
Sbjct: 297 SLTYIVILSVVASLNHLELGKQIHGAV-VRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355
Query: 505 LAMPNEANPVVWRTLLA 521
M E + + W T+++
Sbjct: 356 GQM-KEVDLISWNTVIS 371
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM--MEEKDIFSWNSIMTVH 311
G+ H ++V G + V N LI MY K + A ++F++ ++D+ ++N+I+ +
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 312 EQCGN-HD-----GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
G HD +F + + T S + C + + GY V
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GL DVF+ AL+++Y K +R+A+++F +M +DV WN+M+ Y G
Sbjct: 152 GLQW--------DVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGA 203
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVL 452
G E L +FS + L+PD V+ +L
Sbjct: 204 GDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 326/593 (54%), Gaps = 13/593 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN--V 99
CA T L +++H++ ++ + T+++++Y+K + A F +L PN V
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL---PNHTV 303
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
NAM+ G + L F M + G+ D + + C +V L+ ++H L
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
K G D+DV + +A+++ Y KC+ + EA VF+E+ RD V WNA++ Q +
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDT 423
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+ M + G+ FT VL A + + G VVHG +K G V + ++DM
Sbjct: 424 IAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDM 483
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K + EA ++ + + +++ SWNSI++ + + F ML G +PD T+
Sbjct: 484 YCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTY 543
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+TVL C++LA + G+QIHG I+ + + D ++++ L+DMY KCG+M D+
Sbjct: 544 ATVLDTCANLATIELGKQIHGQIIKQEM--------LGDEYISSTLVDMYAKCGNMPDSL 595
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
++F K K D SWN MI GY + GQG EAL+MF M +A + P+ TFV VL ACSH G
Sbjct: 596 LMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVG 655
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G + LM SRY + P +EH+ C++D+LGR+ EA + +MP EA+ V+W+TL
Sbjct: 656 LLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTL 715
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L+ ++ + ++AE AA V +L+P Y+L+SN+Y GK+ +V R MRQ ++
Sbjct: 716 LSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLK 775
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
K PGCSWIE++ +H F++ D+ HP ++ +Y L++L ++ G A LF
Sbjct: 776 KEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEPASALF 828
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 261/496 (52%), Gaps = 23/496 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G +IH+ ++TG+ + ++L++MY KC ++ AL F+ + E N
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMG-ERN 201
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A I+G N+ +GL+ F M++LG+ + + + + C + + +++H
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP V NAM+ G + G +
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++F+ M++ GI +++GV SA + + G VH + +K G+D V V NA++D
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+YGK K + EA +F+ ME++D SWN+I+ EQ ++ T+ + ML G +PD T
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL AC+ L +L +G +HG + +GL D F+++ ++DMY KCG + +A
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGL--------DAFVSSTVVDMYCKCGMITEA 493
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q + ++ +++ SWN +I G+ ++ Q +EA FS M + +KPD T+ VL C++
Sbjct: 494 QKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANL 553
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ G++ +G + E + ++DM + G + ++ L + +
Sbjct: 554 ATIELGKQI-------HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSL-LMFEKAQKLD 605
Query: 513 PVVWRTLLAASRLHGN 528
V W ++ LHG
Sbjct: 606 FVSWNAMICGYALHGQ 621
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/542 (25%), Positives = 254/542 (46%), Gaps = 53/542 (9%)
Query: 25 TFNHPFTLATCIASLQLCAH--QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
TF+H + QLCA ++ L GQ H+ ML +G + + L+ MY++C
Sbjct: 4 TFSHLY---------QLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGG 54
Query: 83 MKYALFVFNNLS------------------------------CEPNVFTYNAMISGFYSN 112
+A VF+ + +P+V ++NA++SG+
Sbjct: 55 AAHARGVFDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQR 114
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ M + GV PD+ T L+K C + + +IH + K GL++DV G
Sbjct: 115 GMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAG 174
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SALV+ Y KC+ +E+AL+ F + R+ V W A + G Q ++ + LE+F +M + G+
Sbjct: 175 SALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLG 234
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+S+ V + + R +H +K + + V A++D+Y K + +A
Sbjct: 235 VSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRA 294
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + + + N++M + G L+LF M +G D+V+ S V AC+ +
Sbjct: 295 FFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGY 354
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
+ G Q+H + +G D+ DV + NA++D+Y KC ++ +A +VF +M ++D S
Sbjct: 355 LQGLQVHCLAIKSGF-------DV-DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 406
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLM 471
WN +I + ++ + + M ++PD+ T+ VL AC+ L G +
Sbjct: 407 WNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAI 466
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+S G+ + + V+DM + G + EA +L + + V W ++++ L+ ++
Sbjct: 467 KSGLGLDAFVS--STVVDMYCKCGMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQSEE 523
Query: 532 AE 533
A+
Sbjct: 524 AQ 525
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 167/341 (48%), Gaps = 6/341 (1%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F F T SG F + + CA +G ++H +++G +++
Sbjct: 326 FQFMTRSGI-----GFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAIL 380
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
++Y KC + A VF + +V ++NA+I+ N+ + + N M + G+ PD
Sbjct: 381 DLYGKCKALVEAYLVFQEMEQRDSV-SWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDD 439
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+T+ ++K C + ++ +HG K GL LD ++ S +V+ Y KC + EA K+ +
Sbjct: 440 FTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDR 499
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ +++V WN++++G++ + +A + F M G+ FT VL + + G
Sbjct: 500 IGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELG 559
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +HG ++K + + L+DMY K + ++L +FE ++ D SWN+++ +
Sbjct: 560 KQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALH 619
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
G L +F+RM A P+ TF VL ACSH+ L G
Sbjct: 620 GQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/595 (35%), Positives = 325/595 (54%), Gaps = 10/595 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T +A L CA +L+ G EIH +L+ G T+LINMY+KC ++ A F
Sbjct: 104 TKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSF 163
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L +V ++ AMI+ +D + M+ GV+P+K T + D +
Sbjct: 164 KRLE-HRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYL 222
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
E K ++GLV ++ DV + ++ VN + + +A ++FE++ RDVV WN ++ Y
Sbjct: 223 SEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLY 282
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q F +A+ +F R+ ++G+ + T +L+ + G+V+H +V + GYD
Sbjct: 283 VQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDA 342
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+ +YG+ + G+A +IF M KD+ +W + + Q G L+LF M
Sbjct: 343 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 402
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P T VL C+HLAAL GRQIH +I+ N ++ + AL++MY
Sbjct: 403 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRM--------EMVVETALINMYG 454
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M +A VF KM+K+D+ WN M+ Y G E L +F+ M +K D V+FV
Sbjct: 455 KCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVS 514
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN- 509
VLSA SHSG ++ G ++ M + + PT E Y CV+D+LGRAG++ EA ++ L +
Sbjct: 515 VLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGC 574
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ ++W TLL A R H TD A+ AA++V + +P H G YV++SN+Y A G ++ V +
Sbjct: 575 LPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRM 634
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R MR + V+K PG S IE+ + +H F+ DRSHP IYAEL L + +R G
Sbjct: 635 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAG 689
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 254/496 (51%), Gaps = 13/496 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A LQ C+ N+ G+ +H ++ G + L LI MY++C + A VF L
Sbjct: 8 VALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE- 66
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+VF + MI + + L F M++ V+P K T+ ++ C ++ + +
Sbjct: 67 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + + G + DV++G+AL+N Y KC + A F+ L RDVV W AM+ Q +
Sbjct: 127 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 186
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
F A ++RRM +G+ ++ T+ V +A + G+ V+G+V +S V VMN+
Sbjct: 187 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNS 246
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++M+G +G+A +FE M ++D+ +WN ++T++ Q N +RLF R+ G + +
Sbjct: 247 AVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAN 306
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+TF +L + L +L G+ IH + G + D + ALM +Y +C +
Sbjct: 307 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDR--------DAVVATALMSLYGRCEAP 358
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A +F M KDV +W +M + Y +G KEAL +F M +P T V VL C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418
Query: 456 SHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+H L +GR+ ++E+R+ + +E T +I+M G+ G++ EA + M + +
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFEKMAKR-DIL 475
Query: 515 VWRTLLAASRLHGNTD 530
VW ++L A HG D
Sbjct: 476 VWNSMLGAYAQHGYYD 491
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 202/403 (50%), Gaps = 24/403 (5%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD F L++ C V +++H V G + + + L+ Y +C + EA +V
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
FE L +DV W M+ Y Q G++ +AL +F +M +E + ++ T +L+A
Sbjct: 62 FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
K+G +HG +++ G++ V V ALI+MY K V A + F+ +E +D+ SW +++
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA- 180
Query: 312 EQCGNHDG---TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
C HD L+ RM G P+ +T TV A L G+ ++G +V +G+
Sbjct: 181 --CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYG-LVSSGVM 237
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
++ DV + N+ ++M+ G + DA+ +F M +DV +WNI+I Y + E
Sbjct: 238 ES-------DVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGE 290
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES----RYGVVPTIEHY 484
A+ +F + + +K +++TFV +L+ + L++G+ L++ R VV
Sbjct: 291 AVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVA----- 345
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
T ++ + GR +A+++ + M ++ + + W + A +G
Sbjct: 346 TALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNG 387
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD F +L CS + HGR++H ++ G +N + L+ MY +C
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNN--------LVCGHLIQMYAQC 52
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ +AQ VF + +KDV +W MI Y G AL MF M E + P +VT+V +L
Sbjct: 53 GSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAIL 112
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
+AC+ + L G E + + G + T +I+M + G + A++ + +
Sbjct: 113 NACASTESLKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWD-SFKRLEHRD 170
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
V W ++AA H LA +R+ QL+ G N + + ++ A G
Sbjct: 171 VVSWTAMIAACVQHDQFALARWLYRRM-QLD-GVVPNKITLYTVFNAYG 217
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 344/622 (55%), Gaps = 23/622 (3%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
I+ + S F + TF PF L C A + +L+ G+ IH++ G+
Sbjct: 85 IDLYRSMLRFRVAPNKYTF--PFVLKACSALV-------DLRAGRTIHAHAAAAGLHTDL 135
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
T+LI++Y +C + A VF + +V +NAM++G+ ++ + M+
Sbjct: 136 FVSTALIDLYIRCARFGPARNVFAKMPMR-DVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 128 LGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD---VYIGSALVNTYLKCQ 183
G L P+ T L+ A+ + IH + L+ + V IG+AL++ Y KC+
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVL 242
+ A +VF +P+R+ V W+A++ G+ +A +F+ M EG+ ++S +V L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ G +H ++ K G + + N+L+ MY K + EA F+ + KD
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+ ++++ Q G + +F +M + +PD+ T +++PACSHLAAL HG+ HG +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
++ GLA S + N+L+DMY KCG + ++ VF KM +DV SWN MI GYG+
Sbjct: 435 IIRGLALETS--------ICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G GKEA +F M PD+VTF+ +++ACSHSG +++G+ + M +YG++P +E
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+L R G L+EAY+ +MP +A+ VW LL A R+H N DL + ++ + +L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
P GN+VL+SNI+ A G+++E ++R + + +K+PG SWIE+ LH F+ D+S
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQS 666
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HP ++ IY EL ++ +++ G
Sbjct: 667 HPCSRDIYHELDNIMVDIKKLG 688
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 8/315 (2%)
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VF+ +P D +NA++ Y+ +G FH A++++R M + + +++T VL A
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + GR +H G + + V ALID+Y + G A +F M +D+ +WN++
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 308 MTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+ + G H L D G +P+ T ++LP + AL G IH Y +
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L +N + V + AL+DMY KC + A VF M ++ +W+ +I G+ + +
Sbjct: 233 LEQNE-----EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 427 KEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
EA ++F M E + L C+ L G + L+ ++ G+ +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI-AKSGIHADLTASN 346
Query: 486 CVIDMLGRAGQLNEA 500
++ M +AG +NEA
Sbjct: 347 SLLSMYAKAGLINEA 361
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
++ + G + A+ VF ++ D ++N +I Y G A+D++ M ++ P++
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TF VL ACS L GR + + G+ + T +ID+ R + A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRT-IHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
MP + V W +LA HG
Sbjct: 160 KMPMR-DVVAWNAMLAGYANHG 180
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/622 (32%), Positives = 344/622 (55%), Gaps = 23/622 (3%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
I+ + S F + TF PF L C A + +L+ G+ IH++ G+
Sbjct: 85 IDLYRSMLRFRVAPNKYTF--PFVLKACSALV-------DLRAGRTIHAHAAAAGLHTDL 135
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
T+LI++Y +C + A VF + +V +NAM++G+ ++ + M+
Sbjct: 136 FVSTALIDLYIRCARFGPARNVFAKMPMR-DVVAWNAMLAGYANHGMYHHAIAHLLDMQD 194
Query: 128 LGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD---VYIGSALVNTYLKCQ 183
G L P+ T L+ A+ + IH + L+ + V IG+AL++ Y KC+
Sbjct: 195 HGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK 254
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVL 242
+ A +VF +P+R+ V W+A++ G+ +A +F+ M EG+ ++S +V L
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ G +H ++ K G + + N+L+ MY K + EA F+ + KD
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+ ++++ Q G + +F +M + +PD+ T +++PACSHLAAL HG+ HG +
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
++ GLA S + N+L+DMY KCG + ++ VF KM +DV SWN MI GYG+
Sbjct: 435 IIRGLALETS--------ICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGI 486
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G GKEA +F M PD+VTF+ +++ACSHSG +++G+ + M +YG++P +E
Sbjct: 487 HGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 546
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+L R G L+EAY+ +MP +A+ VW LL A R+H N DL + ++ + +L
Sbjct: 547 HYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKL 606
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
P GN+VL+SNI+ A G+++E ++R + + +K+PG SWIE+ LH F+ D+S
Sbjct: 607 GPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQS 666
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HP ++ IY EL ++ +++ G
Sbjct: 667 HPCSRDIYHELDNIMVDIKKLG 688
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 8/315 (2%)
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VF+ +P D +NA++ Y+ +G FH A++++R M + + +++T VL A
Sbjct: 53 ARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSA 112
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + GR +H G + + V ALID+Y + G A +F M +D+ +WN++
Sbjct: 113 LVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAM 172
Query: 308 MTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+ + G H L D G +P+ T ++LP + AL G IH Y +
Sbjct: 173 LAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRAC 232
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L +N + V + AL+DMY KC + A VF M ++ +W+ +I G+ + +
Sbjct: 233 LEQNE-----EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 427 KEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
EA ++F M E + L C+ L G + L+ ++ G+ +
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALI-AKSGIHADLTASN 346
Query: 486 CVIDMLGRAGQLNEA 500
++ M +AG +NEA
Sbjct: 347 SLLSMYAKAGLINEA 361
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
++ + G + A+ VF ++ D ++N +I Y G A+D++ M ++ P++
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TF VL ACS L GR + + G+ + T +ID+ R + A +
Sbjct: 101 YTFPFVLKACSALVDLRAGRT-IHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFA 159
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
MP + V W +LA HG
Sbjct: 160 KMPMR-DVVAWNAMLAGYANHG 180
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 333/616 (54%), Gaps = 49/616 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLR-TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C +L + ++IH + L+ T DS + + L +Y C Q+ A +F+ + P
Sbjct: 15 LEACIQSKSLTEAKKIHQHFLKNTSNADSSV-LHKLTRLYLSCNQVVLARRLFDEIP-NP 72
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N +I + N +D ++ M LGV P+KYT+P ++K C ++A+ + +IH
Sbjct: 73 SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL+ DV++ +ALV+ Y KC + EA ++F + RDVV WNAM+ G + G
Sbjct: 133 SHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCD 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+++ +M +EGI + T+ GVL + + + V G+ ++ + +A+I
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEVSW-------SAMI 245
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
Y C+ EAL+IF MM+ +G PDL
Sbjct: 246 GGYVASDCMKEALDIFRMMQ-------------------------------LSGIDPDLT 274
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T VLPACSHLAAL HG HGY++V G A D + NAL+DMY+KCG +
Sbjct: 275 TMLGVLPACSHLAALQHGFCSHGYLIVRGFAT--------DTLICNALIDMYSKCGKISF 326
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF +M + D+ SWN MI+GYG+ G G EAL +F + LKPD++TF+ +LS+CSH
Sbjct: 327 AREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH 386
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG + +GR + M + +VP +EH C++D+LGRAG ++EA+ MP E + +W
Sbjct: 387 SGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWS 446
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL+A R+H N +L E ++++ L P GN+VL+SNIY A G++++ IR T +
Sbjct: 447 ALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWG 506
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDST 637
++K PGCSWIE+ +H F+ D+SH + I +L L ++ G + D
Sbjct: 507 LKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVE 566
Query: 638 ASGFEKHRLYLEEVIA 653
E+ LY E +A
Sbjct: 567 EEEKEQILLYHSEKLA 582
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 235 RFTVTG----VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
RF V +L A I + +H +K ++ V++ L +Y V A
Sbjct: 4 RFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLAR 63
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ + + WN I+ + G DG + L+ ML G +P+ T+ VL ACS L
Sbjct: 64 RLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLL 123
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
A+ G +IH + + GL DVF+ AL+D Y KCG + +AQ +F+ MS +DV
Sbjct: 124 AIEDGVEIHSHAKMFGLES--------DVFVCTALVDFYAKCGILVEAQRLFSSMSHRDV 175
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+WN MI G + G +A+ + M E + P+ T VGVL C
Sbjct: 176 VAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC 220
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + L C+H LQ G H Y++ G L +LI+MYSKC ++ +A VFN
Sbjct: 273 LTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFN 332
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ ++ ++NAMI G+ + + L F+ + LG+ PD TF CL+ C V+
Sbjct: 333 RMD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVM 391
Query: 152 EVKKIHGLVFKLGLDLDVYIGS------ALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
E G ++ + D I +V+ + ++EA +P DV +W+
Sbjct: 392 E-----GRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWS 446
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKE 229
A+++ HK +E+ +SK+
Sbjct: 447 ALLSAC----RIHKNIELGEEVSKK 467
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC +L ++IH + + N + S + + L +Y C + A+ +
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSS--------VLHKLTRLYLSCNQVVLARRL 65
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F ++ V WN +I Y +G A+D++ M ++P++ T+ VL ACS +
Sbjct: 66 FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G E + +G+ + T ++D + G L EA L +M + + V W ++A
Sbjct: 126 EDGVE-IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIA 183
Query: 522 ASRLHGNTDLAEIAAQRVFQL-EPGHCGN 549
L+G L + A Q + Q+ E G C N
Sbjct: 184 GCSLYG---LCDDAVQLIMQMQEEGICPN 209
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/601 (34%), Positives = 347/601 (57%), Gaps = 26/601 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT + +L A ++ ++ G ++H+ +++ G + +LI MY K + A V
Sbjct: 206 FTFATVLGAL---ADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ +V T+N MI G+ + F +G F+ MR GV + F +K C
Sbjct: 263 FDSMVVRDSV-TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRE 321
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVN 208
+ K++H V K G + I +AL+ TY KC ++EA K+F +VV W AM+
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIG 381
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL----SALIMMGFFKNGRVVHGIVVKM 264
G+ Q KA+++F +MS+EG+ + FT + VL S+L+ +H ++K
Sbjct: 382 GFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQ--------LHAQIIKA 433
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y+ V AL+D Y K V E+ +F + KDI +W++++T Q + + + +F
Sbjct: 434 YYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVF 493
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+++ G +P+ TFS+V+ ACS AA + HG+QIH V +G N C +++
Sbjct: 494 IQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG-KSNALC-------VSS 545
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY+K G++ A+ VFT+ ++D+ SWN MI GYG G K+AL++F M L
Sbjct: 546 ALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPL 605
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+VTF+GVL+AC+H+G + +G ++ +M Y + IEHY+C++D+ RAG ++A ++
Sbjct: 606 DDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDI 665
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A+P +WRTLLAA R+H N +L ++AA+++ L+P YVL+SNI+ G +
Sbjct: 666 INGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNW 725
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
EE +R M ++ V+K GCSWIE+K+ + +F++ D SHP + +YA+L L+ +L++
Sbjct: 726 EEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Query: 624 G 624
G
Sbjct: 786 G 786
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 247/511 (48%), Gaps = 21/511 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L++C + G+++H L++G ++ TSL++MY K + +F+ +
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM 165
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NV ++ +++SG+ N + + N M+ GV P+ +TF ++ D +
Sbjct: 166 GIK-NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H ++ K G + ++ +AL+ YLK + + +A VF+ + +RD V WN M+ GYA I
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + + ++F RM G+ +SR L + +H VVK GY+ +
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ Y K V EA ++F M + ++ +W +++ Q N++ + LF +M G
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGV 404
Query: 333 QPDLVTFSTVLPA-CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ T+STVL S L + +H + I Y + + V AL+D Y K
Sbjct: 405 RPNHFTYSTVLAGKPSSLLSQLHAQIIKAYY-----------EKVPSV--ATALLDAYVK 451
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G++ ++ VF + KD+ +W+ M+ G ++A+++F + + +KP+E TF V
Sbjct: 452 TGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
++ACS S + + + + G + + ++ M + G + E+ E E
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI-ESAEKVFTRQEER 570
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ V W +++ HG+ A VFQ+
Sbjct: 571 DIVSWNSMITGYGQHGDAK----KALEVFQI 597
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 222/440 (50%), Gaps = 16/440 (3%)
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+YA +F+ + ++ YN ++ F N+ + L F + G+ D T C +K
Sbjct: 55 RYAHQLFDETPLK-DISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKV 113
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + +++H K G DV +G++LV+ Y+K + E+ +F+E+ +++VV W
Sbjct: 114 CGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
++++GYA+ G + + + +M EG+ + FT VL AL + G VH ++VK
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G++ V NALI MY K + VG+A +F+ M +D +WN ++ + G + ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F RM AG + F T L CS L +Q+H +V NG +DI
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE---FAQDI-----RT 345
Query: 384 ALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
ALM Y+KC S+ +A +F+ + +V +W MI G+ + ++A+D+F M ++
Sbjct: 346 ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVR 405
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+ T+ VL A S LSQ ++++ Y VP++ T ++D + G + E+
Sbjct: 406 PNHFTYSTVL-AGKPSSLLSQLHA--QIIKAYYEKVPSVA--TALLDAYVKTGNVVESAR 460
Query: 503 LALAMPNEANPVVWRTLLAA 522
+ ++P + + V W +L
Sbjct: 461 VFYSIPAK-DIVAWSAMLTG 479
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/593 (35%), Positives = 338/593 (56%), Gaps = 13/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I L +L GQ++H L+ G+ D L+++ SLINMY K ++ A VFNN
Sbjct: 324 TFILVLATAVRLDSLALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKIGLARTVFNN 382
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S E ++ ++N++I+G +D + + F + + G+ PD YT ++K + L
Sbjct: 383 MS-ERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLS 441
Query: 153 V-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K+IH K D ++ +AL++ Y + + M+EA +F D+V WNAM++GY
Sbjct: 442 LSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYT 500
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q + HK LE+F M K+G FT+ VL + G+ VH +K GYD +
Sbjct: 501 QSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLW 560
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + ++DMY K + A F+ + D +W ++++ + G + L +F +M G
Sbjct: 561 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMG 620
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T +T+ A S L AL GRQIH N L N + D F+ +L+DMY K
Sbjct: 621 VLPDEFTIATLAKASSCLTALEQGRQIHA----NALKLNCT----SDPFVGTSLVDMYAK 672
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA +F ++ ++ +WN M++G G+GKEAL +F M +KPD+VTF+GV
Sbjct: 673 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGV 732
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSHSG +S+ +++ M YG+ P IEHY+C+ D LGRAG + EA L +M EA
Sbjct: 733 LSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEA 792
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ ++RTLLAA R+ G+T+ + A ++ +LEP YVL+SN+Y A K++E+ R
Sbjct: 793 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 852
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ V+K+PG SWIE+K+ +H F+ DRS+P+ + IY ++ + +++ G
Sbjct: 853 MMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEG 905
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 220/444 (49%), Gaps = 24/444 (5%)
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N+ S + + N ++SG+ L F M + + D+ TF ++ + ++
Sbjct: 279 NDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSL 338
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+++H + KLGLDL + + ++L+N Y K + + A VF + RD++ WN+++ G
Sbjct: 339 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGI 398
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM--GFFKNGRV-VHGIVVKMGYD 267
AQ +A+ +F ++ + G+ +T+T VL A + G + ++ VH I D
Sbjct: 399 AQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVAD 458
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG--TLRLFD 325
S V ALID Y + +C+ EA E+ D+ +WN++M+ + Q +HDG TL LF
Sbjct: 459 SFVS--TALIDAYSRNRCMKEA-EVLFGRNNFDLVAWNAMMSGYTQ--SHDGHKTLELFA 513
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G + D T +TVL C L A+ G+Q+H Y + +G D+ D+++++ +
Sbjct: 514 LMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGY-------DL-DLWVSSGI 565
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCG M AQ F + D +W +I G +G+ + AL +FS M + PDE
Sbjct: 566 LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDE 625
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY--TCVIDMLGRAGQLNEAYEL 503
T + A S L QGR+ + + + T + + T ++DM + G +++AY L
Sbjct: 626 FTIATLAKASSCLTALEQGRQ---IHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCL 682
Query: 504 ALAMPNEANPVVWRTLLAASRLHG 527
N W +L HG
Sbjct: 683 -FKRIEMMNITAWNAMLVGLAQHG 705
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 255/574 (44%), Gaps = 89/574 (15%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C L+ ++L G+ H+ +L + +LI+MYSKC + YA VF+ +
Sbjct: 49 CFGFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMP 108
Query: 95 CEPNVFTYNAMISGFYSNDFAF-----KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
E ++ ++N++++ + + + F +RQ V + T ++K C
Sbjct: 109 -ERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVN-------------------------------T 178
V + HG K+GLD D ++ ALVN
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227
Query: 179 YLKCQFMEEALKVFE----------ELPLR----------------------------DV 200
YL+ F EEA+ + E+ LR ++
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEI 287
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
+ N +++GY G++ L+ F M + + + T VL+ + + G+ VH +
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+K+G D + V N+LI+MY K + +G A +F M E+D+ SWNS++ Q
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ LF ++L G +PD T ++VL A S L L +QIH V+ + N ++ D
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIH----VHAIKTN----NVADS 459
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F++ AL+D Y++ M++A+++F + + D+ +WN M+ GY G + L++F+ M +
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ D+ T VL C ++QG++ ++S Y + + + ++DM + G ++
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMS 576
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A + A + V W TL++ +G + A
Sbjct: 577 AA-QFAFDSIPVPDDVAWTTLISGCIENGEEERA 609
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/577 (35%), Positives = 335/577 (58%), Gaps = 14/577 (2%)
Query: 53 EIHSYMLRTGII-DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++H+ LR G++ S + SL++ Y + ++ A VF+ +S E +V +NAM+SG
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMS-ERDVPAWNAMLSGLCR 146
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A + + F M GV D T ++ C + + +H K GLD ++++
Sbjct: 147 NARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFV 206
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL++ Y K +EEA VF + RD+V WN++++G Q G+ AL++F+ M G+
Sbjct: 207 CNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGV 266
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVPVMNALIDMYGKGKCVGEAL 290
T+ + SA+ G ++ + +H V++ G+D + NA++DMY K + A
Sbjct: 267 SPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQ 326
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHL 349
+F+ M +D SWN+++T + Q G + + + M G + TF +VLPA SHL
Sbjct: 327 RMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHL 386
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL G ++H + GL DV++ L+D+Y KCG + +A ++F KM ++
Sbjct: 387 GALQQGMRMHALSIKIGLNV--------DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRS 438
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN +I G G+ G G EAL +FS M + +KPD VTFV +L+ACSH+G + QGR F
Sbjct: 439 TGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD 498
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+M+ Y +VP +HY C+ DMLGRAGQL+EA+ MP + + VW LL A R+HGN
Sbjct: 499 VMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNV 558
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
++ ++A+Q +F+L+P + G YVLMSN+Y GK++ V ++R +R+QN++K PG S IE+
Sbjct: 559 EMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEV 618
Query: 590 KDGLHTFISSDRS--HPEAKSIYAELHSLTARLREHG 624
K ++ F S +++ HP+ + I AEL SL A++R G
Sbjct: 619 KRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVG 655
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 222/433 (51%), Gaps = 16/433 (3%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALK 190
PD +TFP LI+ + ++H +LGL V+ +LV+ YL+ + EA K
Sbjct: 68 PDGFTFPSLIRAAPSNAS---AAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+E+ RDV WNAM++G + +A+ +F RM EG+ TV+ VL +++G
Sbjct: 125 VFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
V+H VK G D + V NALID+YGK + EA +F ME +D+ +WNSI++
Sbjct: 185 QVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISG 244
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
EQ G L++F M +G PD++T ++ A + + +H Y++ G
Sbjct: 245 CEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGW--- 301
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+DD+ NA++DMY K ++ AQ +F M +D SWN +I GY +G EA+
Sbjct: 302 ----DVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357
Query: 431 DMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ + M + + LK + TFV VL A SH G L QG L + G+ + TC+ID
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHAL-SIKIGLNVDVYVGTCLID 416
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHC 547
+ + G+L EA L MP + W +++ +HG+ A R+ Q ++P H
Sbjct: 417 LYAKCGKLAEAMLLFEKMPRRSTG-PWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHV 475
Query: 548 GNYVLMSNIYVAG 560
L++ AG
Sbjct: 476 TFVSLLAACSHAG 488
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/600 (33%), Positives = 343/600 (57%), Gaps = 16/600 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT + + S C+ + + +++H+++L++ ++ +LI+MY+K QM A+ V
Sbjct: 200 FTFGSIVKS---CSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINV 256
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVM 148
F+ + + ++ ++ +MI+GF + + L F M V P+++ F C ++
Sbjct: 257 FSRIIIK-DLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLL 315
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++IHGL K GL D++ G +L + Y KC F+E A VF + D+V WNA++
Sbjct: 316 EPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIA 375
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A + ++ F +M G+ + TV +L A +G VH +VKMG++
Sbjct: 376 GFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL 435
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+PV N+L+ MY K + +AL++FE + K DI SWN+++T Q LRL M
Sbjct: 436 DIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLM 495
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
++ +PD VT + VL + +A+ G QIH +I+ +GL D+ ++NAL++
Sbjct: 496 FASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL--------DISVSNALIN 547
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MYTKCGS+ A+ +F + D+ SW+ +I+GY G GKEA ++F M +KP+E+T
Sbjct: 548 MYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEIT 607
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVG+L+ACSH G + +G + M+ Y + PT EH +C++D+L RAG L+ A + M
Sbjct: 608 FVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQM 667
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + VVW+TLLAA ++HGN ++ + AA+ V +++P + V++ NI+ + G +++
Sbjct: 668 PFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFA 727
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+R +MR+ +V K PG SWIE+KD +H F++ D HPE IY L L ++ + D C
Sbjct: 728 RLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILD--DSC 785
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 261/561 (46%), Gaps = 23/561 (4%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T + C+ +L+ G++IH +ML + +++MY KC +K A
Sbjct: 95 PLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARN 154
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+++ + NV ++ +MISG+ + + M + G +PD +TF ++K C +
Sbjct: 155 MFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLD 213
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+++H V K D+ +AL++ Y K M +A+ VF + ++D++ W +M+
Sbjct: 214 DFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIA 273
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G++Q+G +AL FR M + ++ + F SA + GR +HG+ +K G
Sbjct: 274 GFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLG 333
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + +L DMY K + A +F +E+ D+ +WN+I+ N + F +M
Sbjct: 334 SDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQM 393
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G P+ VT ++L ACS L HG Q+H YIV G D+ + N+L+
Sbjct: 394 RHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNL--------DIPVCNSLLS 445
Query: 388 MYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY+KC ++ DA VF + +K D+ SWN ++ Q E L + M +++KPD V
Sbjct: 446 MYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHV 505
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VL + G + + + G+ I +I+M + G L A ++ +
Sbjct: 506 TLTNVLVSSGQIASYEVGSQIHCFI-MKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564
Query: 507 MPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG---G 561
+ N + + W +L+ A G R ++P N + I A G
Sbjct: 565 IGN-PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKP----NEITFVGILTACSHIG 619
Query: 562 KYEEVLDIRHTMRQQNVRKNP 582
EE L + TM Q++ R +P
Sbjct: 620 MVEEGLKLYRTM-QEDYRISP 639
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 217/451 (48%), Gaps = 18/451 (3%)
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
A K D F + YT LI C + ++ +KIH + D+ + +
Sbjct: 81 ALKAFDIFQKCSSSPLKSVTYTH--LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
+++ Y KC ++EA +F+ +PL++VV W +M++GY++ GE A+ ++ +M + G
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
FT ++ + + FK R +H V+K + + + NALI MY K + +A+ +F
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
+ KD+ SW S++ Q G L F MLS +QP+ F + ACS L
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GRQIHG + GL D+F +L DMY KCG + A+ VF + K D+ +W
Sbjct: 319 CGRQIHGLCIKFGLGS--------DLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I G+ KE+ FS M L P++VT + +L ACS L+ G + +
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI-V 429
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G I ++ M + LN+A ++ + N+A+ V W TLL A
Sbjct: 430 KMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVL 489
Query: 534 IAAQRVF--QLEPGHCGNYVLMSNIYVAGGK 562
+ +F +++P H V ++N+ V+ G+
Sbjct: 490 RLTKLMFASRIKPDH----VTLTNVLVSSGQ 516
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/593 (33%), Positives = 326/593 (54%), Gaps = 16/593 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L CI L CA + G H Y+++ G +LI+ Y+K + A+ VFN
Sbjct: 423 LLKCITCLS-CA-----RDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFN 476
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++N++ISG SN + ++ F M G D T ++ C
Sbjct: 477 RMP-RQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWF 535
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +HG K GL + + +AL++ Y C + ++F + ++VV W AM+ Y
Sbjct: 536 AGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYM 595
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G F K + + M +GI F VT L A K G+ VHG ++ G + +P
Sbjct: 596 RAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLP 655
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL++MY K + V EA IF+ + KD+ SWN+++ + + + + LF ML
Sbjct: 656 VANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ- 714
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F+P+ VT + +LPA + +++L GR+IH Y + G ++D + +NAL+DMY K
Sbjct: 715 FRPNAVTMTCILPAAASISSLERGREIHAYALRRGF--------LEDSYASNALVDMYVK 766
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ A+++F +++KK++ SW IMI GYGM G GK A+ +F M + ++PD +F +
Sbjct: 767 CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAI 826
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC HSG ++GR F M+ Y + P ++HYTC++D+L R G L EA E +MP E
Sbjct: 827 LYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEP 886
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W +LL R+H N LAE A +VF+LEP + G YVL++NIY ++E V +++
Sbjct: 887 DSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKN 946
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + +R+N G SWIE++ +H FI+ +R+HP+ I L + R+R+ G
Sbjct: 947 KIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEG 999
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 250/504 (49%), Gaps = 21/504 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI----------IDSPLSITSLINMYSKCCQM 83
T ++ L CA G+ +H Y +++G+ ID + L+ MY KC M
Sbjct: 307 TVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDM 366
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+ +S + NV +N ++ G+ + L F M +LG+ PD++ CL+KC
Sbjct: 367 ASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKC 426
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
+ + HG + KLG + +AL++ Y K + +A+ VF +P +D + W
Sbjct: 427 ITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISW 486
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N++++G + G +A+E+F RM +G + T+ VL A ++ GRVVHG VK
Sbjct: 487 NSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVK 546
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G + NAL+DMY +IF M +K++ SW +++T + + G D L
Sbjct: 547 TGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL 606
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
M+ G +PD+ ++ L A + +L G+ +HGY + NG+ K + + N
Sbjct: 607 LQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKL--------LPVAN 658
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
ALM+MY KC ++ +A+++F +++ KDV SWN +I GY + E+ +FS M + +P
Sbjct: 659 ALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRP 717
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ VT +L A + L +GRE + R G + ++DM + G L A L
Sbjct: 718 NAVTMTCILPAAASISSLERGRE-IHAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776
Query: 504 ALAMPNEANPVVWRTLLAASRLHG 527
+ N + W ++A +HG
Sbjct: 777 -FDRLTKKNLISWTIMIAGYGMHG 799
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/503 (28%), Positives = 238/503 (47%), Gaps = 32/503 (6%)
Query: 39 LQLCAHQTNLQKGQEIH-----SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+QLC + +L+ + H S TG S L L+ Y KC + A VF+ +
Sbjct: 104 VQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLG-KRLVLAYLKCGDLGEARTVFDGM 162
Query: 94 SCEP-NVFTYNAMISGFY-SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V + +++S + + DF + + F M+ GV PD + C++KC + ++
Sbjct: 163 PPQAADVRVWTSLMSAYAKAGDFQ-EAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E + IHGL+ KLGL + +AL+ Y +C ME+A +VF+ + RD + WN+M+ G
Sbjct: 222 EGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF 281
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G A+++F +M +G +S TV VL A +G+ G+ VHG VK G G+
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLD 341
Query: 272 VMNALID----------MYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGT 320
+ + ID MY K + A +F+ M K ++ WN IM + + G + +
Sbjct: 342 SVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-AKNGSCKDIDDV 379
L LF +M G PD S +L + L+ G HGYIV G A+ C
Sbjct: 402 LSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC------ 455
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
NAL+ Y K + DA +VF +M ++D SWN +I G +G EA+++F M
Sbjct: 456 ---NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQ 512
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ D VT + VL AC+ S + GR + + G++ ++DM
Sbjct: 513 GQELDSVTLLSVLPACAQSRYWFAGR-VVHGYSVKTGLIGETSLANALLDMYSNCSDWQS 571
Query: 500 AYELALAMPNEANPVVWRTLLAA 522
++ +M + N V W ++ +
Sbjct: 572 TNQIFRSM-GQKNVVSWTAMITS 593
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 180/346 (52%), Gaps = 14/346 (4%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----VYIGSALVNTYLKCQFMEEA 188
D ++ +++ C + ++ K+ H L+ +G LV YLKC + EA
Sbjct: 96 DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEA 155
Query: 189 LKVFEELPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
VF+ +P + DV +W ++++ YA+ G+F +A+ +FR+M G+ V+ VL +
Sbjct: 156 RTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+G G V+HG++ K+G V NALI +Y + + +A +F+ M +D SWNS
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ G H + LF +M S G + VT +VLPAC+ L + G+ +HGY V +G
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335
Query: 367 L--AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGMD 423
L + IDD + + L+ MY KCG M A+ VF MS K +V WN+++ GY
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLS-----ACSHSGFLSQG 464
G+ +E+L +F M E + PDE +L +C+ G ++ G
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/493 (40%), Positives = 291/493 (59%), Gaps = 14/493 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T+ LIKCC AV + + +H VF G + ++ + L+N Y+K ++EA +F
Sbjct: 15 DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+P R+VV W M++ Y+ HKAL+ M +EG+ + +T + VL A
Sbjct: 75 DEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRAC---DGLL 131
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
N R +HG ++K+G +S V V +ALID Y K +AL +F M D+ WNSI+
Sbjct: 132 NLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFA 191
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
Q + D TL L+ RM A F D T ++VL AC+ LA L GRQ+H +++
Sbjct: 192 QNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL--------- 242
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALD 431
K D+ +NNAL+DMY KCGS+ DA ++FT+M ++KDV SW+ MI G +G +AL
Sbjct: 243 -KYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALK 301
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M KP+ +T +GVL ACSH+G ++ G + M+ +G+ P EHY C+ID+L
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLL 361
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG+L+EA +L M +E + V WR LL A R+H N DLA AA+ + +L+P G Y+
Sbjct: 362 GRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYI 421
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L+SNIY K+E+V ++R MR + V+K+PGCSWIE+ +H FI D SHP + I
Sbjct: 422 LLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKR 481
Query: 612 ELHSLTARLREHG 624
EL L RL G
Sbjct: 482 ELSQLIQRLMRLG 494
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 207/385 (53%), Gaps = 23/385 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C + +Q+ + +H ++ G I +LINMY K + A +F+ + + N
Sbjct: 23 IKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP-DRN 81
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ MIS + +++ K LDF M + GV P+ YT+ +++ C +L ++++HG
Sbjct: 82 VVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACD---GLLNLRQLHG 138
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K+GL+ DV++ SAL++TY K +AL VF E+ D+V+WN+++ G+AQ + +
Sbjct: 139 SILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDE 198
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +++RM + + T+T VL A + + GR VH V+K YD + + NAL+D
Sbjct: 199 TLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLD 256
Query: 279 MYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + +A +F MM EKD+ SW++++ Q G L+LF+ M S G +P+ +
Sbjct: 257 MYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYI 316
Query: 338 TFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
T VL ACSH + G + + + ++ ++ C ++D+ + G
Sbjct: 317 TILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGC-----------IIDLLGRAG 365
Query: 394 SMRDAQMVFTKMS-KKDVASWNIMI 417
+ +A + +M+ + D +W I++
Sbjct: 366 KLDEAVKLIHEMNHEPDAVTWRILL 390
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 153/308 (49%), Gaps = 23/308 (7%)
Query: 218 KALEVFRR--MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
KA+E R +S + I T + ++ ++ G + R+VH V GY+ ++N
Sbjct: 2 KAMEAMHRNRLSADAI-----TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINT 56
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI+MY K + EA +F+ M ++++ SW ++++ + + L ML G +P+
Sbjct: 57 LINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPN 116
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+ T+S+VL AC L++ RQ+HG I+ GL DVF+ +AL+D Y+K G
Sbjct: 117 MYTYSSVLRACD---GLLNLRQLHGSILKVGLES--------DVFVRSALIDTYSKLGEQ 165
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA VF +M D+ WN +I G+ + G E L ++ M A D+ T VL AC
Sbjct: 166 HDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRAC 225
Query: 456 SHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ L GR+ + +++ ++ ++DM + G L +A L M E + +
Sbjct: 226 TGLALLELGRQVHVHVLKYDQDLILN----NALLDMYCKCGSLEDANLLFTRMMTEKDVI 281
Query: 515 VWRTLLAA 522
W T++A
Sbjct: 282 SWSTMIAG 289
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFN 91
+T + L+ C L+ G+++H ++L+ D L + +L++MY KC ++ A +F
Sbjct: 216 STLTSVLRACTGLALLELGRQVHVHVLK---YDQDLILNNALLDMYCKCGSLEDANLLFT 272
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+ E +V +++ MI+G N F+ L F M+ G P+ T ++ C
Sbjct: 273 RMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFAC 325
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 328/577 (56%), Gaps = 12/577 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
++ GQ++HS M++ G + + ++L++MY+KC +++ A VF +++ N T+NA+IS
Sbjct: 116 VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR-NSVTWNALIS 174
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ + M GV D TF L+ D ++H + K GL
Sbjct: 175 GYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLAS 234
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D + +A++ Y +C +E+A +VF+ + RD+V WN+M+ Y + +A ++F M
Sbjct: 235 DTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEM 294
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG--K 284
G +T T V+SA G+ +HG+V+K G + VP+ N+LI MY K K
Sbjct: 295 QVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSK 354
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ EAL IFE +E KD SWNSI+T Q G + L+ F+ M S D FS VL
Sbjct: 355 SMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLR 414
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+CS LA L G+Q+H ++ +G NG F+ ++L+ MY+KCG + DA+ F
Sbjct: 415 SCSDLATLQLGQQVHVLVLKSGFEPNG--------FVASSLIFMYSKCGVIEDARKSFDA 466
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
K +WN +I GY G+GK ALD+F M + ++K D +TFV VL+ACSH G + +G
Sbjct: 467 TPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 526
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
FL MES YG+ P +EHY C+ID+LGRAG+L+EA L AMP E + +VW+TLL A R
Sbjct: 527 WSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACR 586
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
G+ +LA A + +LEP YVL+S+++ ++ E I+ M+++ V+K PG
Sbjct: 587 TCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGW 646
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
SWIE+K+ + +F + DRSHP + IY L L +R
Sbjct: 647 SWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIR 683
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 249/490 (50%), Gaps = 14/490 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T L + H +++G S + ++I+ Y+KC +++ A +F S + + ++N M
Sbjct: 13 TALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETS-QRDAVSWNTM 71
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I+GF + L+F M++ G D Y+F ++K V V +++H ++ K+G
Sbjct: 72 IAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGY 131
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ +V+ GSAL++ Y KC+ +E+A +VF+ + +R+ V WNA+++GYAQ+G+ A +
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M EG+ + T +L+ L K VH +VK G S V NA+I Y +
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251
Query: 286 VGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ +A +F+ +E +D+ +WNS++ + + +LF M GF+PD+ T+++V+
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS 311
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK--CGSMRDAQMVF 402
A + G+ +HG ++ GL V ++N+L+ MY K SM +A +F
Sbjct: 312 AAFEGSHQGQGKSLHGLVIKRGLEFL--------VPISNSLIAMYLKSHSKSMDEALNIF 363
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ KD SWN ++ G+ G ++AL F M + D F VL +CS L
Sbjct: 364 ESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQ 423
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G++ + ++ + G P + +I M + G + +A + A P +++ + W +L+
Sbjct: 424 LGQQ-VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS-IAWNSLIFG 481
Query: 523 SRLHGNTDLA 532
HG +A
Sbjct: 482 YAQHGRGKIA 491
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ LQ GQ++H +L++G + +SLI MYSKC ++ A F+ +
Sbjct: 411 AVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKD 470
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
++ +N++I G+ + LD F M+ V D TF ++ C + V E
Sbjct: 471 SSI-AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEE---- 525
Query: 157 HGLVFKLGLDLDVYIG------SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
G F ++ D I + +++ + ++EA + E +P D ++W ++
Sbjct: 526 -GWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 584
Query: 210 YAQIGEFHKALEV 222
G+ A +V
Sbjct: 585 CRTCGDIELASQV 597
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 338/605 (55%), Gaps = 18/605 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L +L G++IH+ ++++ SL+NMYSK + A F N
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN- 954
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC--DVMAVL 151
S E ++ ++N MIS + N+ + + F + + G+ PD++T +++ C D
Sbjct: 955 SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYF 1014
Query: 152 EV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ ++H K G+ D ++ +AL++ Y K M+EA + D+ WNA++ GY
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGY 1074
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ + KALE F M + GI + T+ + A + K G+ + +K+G+++ +
Sbjct: 1075 IKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V + ++DMY K + ALE+F + D +W ++++ + + G+ D L ++ M +
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVS 1194
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID---DVFMNNALMD 387
G QPD TF+T++ A S L AL G+QIH +V +D D F+ +L+D
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVV-----------KLDYSLDHFVGTSLVD 1243
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS++DA VF KM + V WN M+LG G EAL++F M ++PD+VT
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVT 1303
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVLSACSHSG S+ ++ M YG+ P IEHY+C++D LGRAG++ EA + +M
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM 1363
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P +A+ ++R LL A R G+ + A+ A ++ L+P YVL+SNIY A ++++V
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
D R+ M+ +NV+K+PG SWI++K+ +H F+ DRSHP+A IY ++ L R+RE G
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYV 1483
Query: 628 AGTLF 632
T F
Sbjct: 1484 PDTDF 1488
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 219/490 (44%), Gaps = 43/490 (8%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+Q + +H Y ++ G +L+N+Y K + A +F+ + E + +N M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLK 791
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ N F + L FF+ + G PD C+I G++
Sbjct: 792 AYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIG---------------------GVNS 830
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV +K A+K+F ++ WN + + G+ A++ F+ +
Sbjct: 831 DVSNNRKRHAEQVKAY----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ I T+ +LSA + G +H +V+K + VPV N+L++MY K V
Sbjct: 887 RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A + F E D+ SWN++++ + Q + F +L G +PD T ++VL ACS
Sbjct: 947 AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006
Query: 348 ---HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
G Q+H Y + C I+D F++ AL+D+Y+K G M +A+ +
Sbjct: 1007 TGDEGEYFTLGSQVHVYAI--------KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG 1058
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
D+ASWN ++ GY + ++AL+ FS M E + DE+T + A L QG
Sbjct: 1059 KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL--ALAMPNEANPVVWRTLLAA 522
++ + + G + + V+DM + G + A EL ++ P+E V W T+++
Sbjct: 1119 KQ-IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE---VAWTTMISG 1174
Query: 523 SRLHGNTDLA 532
+G+ D A
Sbjct: 1175 YIENGDEDHA 1184
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLAT I + NL++G++I +Y ++ G + + +++MY KC M AL +F
Sbjct: 1101 TLATAI---KASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+S P+ + MISG+ N L ++ MR GV PD+YTF LIK + A+
Sbjct: 1158 GEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K+IH V KL LD ++G++LV+ Y KC +++A +VF ++ +R VV WNAM+ G
Sbjct: 1217 EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGL 1276
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSG 269
AQ G +AL +FR M GI + T GVLSA G F + + G
Sbjct: 1277 AQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPE 1336
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDRML 328
+ + L+D G+ + EA + M K S + +++ G+ + R+ D++L
Sbjct: 1337 IEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Query: 329 S 329
+
Sbjct: 1397 A 1397
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 210/465 (45%), Gaps = 49/465 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L+ G+ H+ ++ +G + +LI MYSKC + A VF+ S + ++ T+N+++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDLVTWNSIL 684
Query: 107 SGFY-----SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ + S + +G F +R+ G + T L+K C V + +HG
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+G +LD+++ ALVN Y K + +A +F+++P RD VLWN M+ Y + +AL
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 222 VFRRMSKEGI---WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
F + G + + V G +++ + N R H VK
Sbjct: 805 FFSAFHRSGFXPDFSNLHCVIGGVNSDV-----SNNRKRHAEQVK--------------- 844
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
A+++F + +IF+WN +T G + F +L + D VT
Sbjct: 845 --------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+L A L G QIH ++ + A V ++N+LM+MY+K G + A
Sbjct: 897 LVIILSAAVGADDLDLGEQIHALVIKSSFAPV--------VPVSNSLMNMYSKAGVVYAA 948
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-- 456
+ F + D+ SWN MI Y + EA+ F + LKPD+ T VL ACS
Sbjct: 949 EKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG 1008
Query: 457 -HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ + G + + + + G++ T +ID+ + G+++EA
Sbjct: 1009 DEGEYFTLGSQ-VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 41/382 (10%)
Query: 147 VMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
MA L++ K+ H + G D Y+ + L+ Y KC + A +VF++ RD+V WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 206 MVNGYAQIGE--FHKALEVFRR---MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
++ YAQ + + LE FR + + G ++R T+ +L ++ GF + VHG
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
VK+G++ + V AL+++Y K VG+A +F+ M E+D WN ++ + + D
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
LR F +GF PD FS + + V+ G+ DV
Sbjct: 803 LRFFSAFHRSGFXPD---FSNL------------------HCVIGGVNS--------DVS 833
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
N K +M+ +F ++ +WN + + GQ A+D F + +
Sbjct: 834 NNRKRHAEQVKAYAMK----MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ D VT V +LSA + L G + L+ + P + +++M +AG + A
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
Query: 501 YELALAMPNEANPVVWRTLLAA 522
+ + P E + + W T++++
Sbjct: 949 EKTFINSP-ELDLISWNTMISS 969
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
I M K G+ H +V G + N LI MY K + A ++F+ ++D+ +WN
Sbjct: 622 IAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWN 681
Query: 306 SIMTVHEQCGN--HDGTL---RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
SI+ + Q + ++ L RLF + GF +T + +L C + +HG
Sbjct: 682 SILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y V G D+F++ AL+++Y K G + A+++F KM ++D WN+M+ Y
Sbjct: 742 YAVKIGFEL--------DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAY 793
Query: 421 GMDGQGKEALDMFSCMCEAKLKPD 444
+ EAL FS + PD
Sbjct: 794 VENSFQDEALRFFSAFHRSGFXPD 817
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 338/605 (55%), Gaps = 18/605 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L +L G++IH+ ++++ SL+NMYSK + A F N
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN- 954
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC--DVMAVL 151
S E ++ ++N MIS + N+ + + F + + G+ PD++T +++ C D
Sbjct: 955 SPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYF 1014
Query: 152 EV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ ++H K G+ D ++ +AL++ Y K M+EA + D+ WNA++ GY
Sbjct: 1015 TLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGY 1074
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ + KALE F M + GI + T+ + A + K G+ + +K+G+++ +
Sbjct: 1075 IKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V + ++DMY K + ALE+F + D +W ++++ + + G+ D L ++ M +
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVS 1194
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID---DVFMNNALMD 387
G QPD TF+T++ A S L AL G+QIH +V +D D F+ +L+D
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVV-----------KLDYSLDHFVGTSLVD 1243
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS++DA VF KM + V WN M+LG G EAL++F M ++PD+VT
Sbjct: 1244 MYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVT 1303
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVLSACSHSG S+ ++ M YG+ P IEHY+C++D LGRAG++ EA + +M
Sbjct: 1304 FIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASM 1363
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P +A+ ++R LL A R G+ + A+ A ++ L+P YVL+SNIY A ++++V
Sbjct: 1364 PFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVT 1423
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
D R+ M+ +NV+K+PG SWI++K+ +H F+ DRSHP+A IY ++ L R+RE G
Sbjct: 1424 DARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYV 1483
Query: 628 AGTLF 632
T F
Sbjct: 1484 PDTDF 1488
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 219/490 (44%), Gaps = 43/490 (8%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+Q + +H Y ++ G +L+N+Y K + A +F+ + E + +N M+
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMP-ERDAVLWNVMLK 791
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ N F + L FF+ + G PD C+I G++
Sbjct: 792 AYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIG---------------------GVNS 830
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV +K A+K+F ++ WN + + G+ A++ F+ +
Sbjct: 831 DVSNNRKRHAEQVKAY----AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLL 886
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ I T+ +LSA + G +H +V+K + VPV N+L++MY K V
Sbjct: 887 RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A + F E D+ SWN++++ + Q + F +L G +PD T ++VL ACS
Sbjct: 947 AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006
Query: 348 ---HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
G Q+H Y + C I+D F++ AL+D+Y+K G M +A+ +
Sbjct: 1007 TGDEGEYFTLGSQVHVYAI--------KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG 1058
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
D+ASWN ++ GY + ++AL+ FS M E + DE+T + A L QG
Sbjct: 1059 KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL--ALAMPNEANPVVWRTLLAA 522
++ + + G + + V+DM + G + A EL ++ P+E V W T+++
Sbjct: 1119 KQ-IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDE---VAWTTMISG 1174
Query: 523 SRLHGNTDLA 532
+G+ D A
Sbjct: 1175 YIENGDEDHA 1184
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLAT I + NL++G++I +Y ++ G + + +++MY KC M AL +F
Sbjct: 1101 TLATAI---KASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+S P+ + MISG+ N L ++ MR GV PD+YTF LIK + A+
Sbjct: 1158 GEIS-RPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTAL 1216
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K+IH V KL LD ++G++LV+ Y KC +++A +VF ++ +R VV WNAM+ G
Sbjct: 1217 EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGL 1276
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSG 269
AQ G +AL +FR M GI + T GVLSA G F + + G
Sbjct: 1277 AQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPE 1336
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDRML 328
+ + L+D G+ + EA + M K S + +++ G+ + R+ D++L
Sbjct: 1337 IEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLL 1396
Query: 329 S 329
+
Sbjct: 1397 A 1397
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 211/462 (45%), Gaps = 43/462 (9%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L+ G+ H+ ++ +G + +LI MYSKC + A VF+ S + ++ T+N+++
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDLVTWNSIL 684
Query: 107 SGFY-----SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ + S + +G F +R+ G + T L+K C V + +HG
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+G +LD+++ ALVN Y K + +A +F+++P RD VLWN M+ Y + +AL
Sbjct: 745 KIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR 804
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
F SA GFF + +H ++ + D V N
Sbjct: 805 FF-------------------SAFHRSGFFPDFSNLHCVIGGVNSD----VSNNRKRHAE 841
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+ K A+++F + +IF+WN +T G + F +L + D VT
Sbjct: 842 QVKAY--AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L A L G QIH ++ + A V ++N+LM+MY+K G + A+
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPV--------VPVSNSLMNMYSKAGVVYAAEKT 951
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS---HS 458
F + D+ SWN MI Y + EA+ F + LKPD+ T VL ACS
Sbjct: 952 FINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEG 1011
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ + G + + + + G++ T +ID+ + G+++EA
Sbjct: 1012 EYFTLGSQ-VHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA 1052
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 174/382 (45%), Gaps = 41/382 (10%)
Query: 147 VMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
MA L++ K+ H + G D Y+ + L+ Y KC + A +VF++ RD+V WN+
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682
Query: 206 MVNGYAQIGE--FHKALEVFRR---MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
++ YAQ + + LE FR + + G ++R T+ +L ++ GF + VHG
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
VK+G++ + V AL+++Y K VG+A +F+ M E+D WN ++ + + D
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
LR F +GF PD FS + + V+ G+ DV
Sbjct: 803 LRFFSAFHRSGFFPD---FSNL------------------HCVIGGVNS--------DVS 833
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
N K +M+ +F ++ +WN + + GQ A+D F + +
Sbjct: 834 NNRKRHAEQVKAYAMK----MFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ D VT V +LSA + L G + L+ + P + +++M +AG + A
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALV-IKSSFAPVVPVSNSLMNMYSKAGVVYAA 948
Query: 501 YELALAMPNEANPVVWRTLLAA 522
+ + P E + + W T++++
Sbjct: 949 EKTFINSP-ELDLISWNTMISS 969
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 13/204 (6%)
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
I M K G+ H +V G + N LI MY K + A ++F+ ++D+ +WN
Sbjct: 622 IAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWN 681
Query: 306 SIMTVHEQCGN--HDGTL---RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
SI+ + Q + ++ L RLF + GF +T + +L C + +HG
Sbjct: 682 SILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHG 741
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y V G D+F++ AL+++Y K G + A+++F KM ++D WN+M+ Y
Sbjct: 742 YAVKIGFEL--------DLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAY 793
Query: 421 GMDGQGKEALDMFSCMCEAKLKPD 444
+ EAL FS + PD
Sbjct: 794 VENSFQDEALRFFSAFHRSGFFPD 817
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 339/599 (56%), Gaps = 11/599 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT L + A +++L G ++H+ ++ G+ +L++MY+KC + +F
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
L ++ T+N MISG N F + L F M++ G+ PD T L+ D+
Sbjct: 307 -LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFN 365
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K++HG + + + +DV++ SALV+ Y KC+ + A V++ DVV+ + M++GY
Sbjct: 366 QGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A+++FR + ++GI + + VL A M K G+ +H +K Y+
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +AL+DMY K + + IF + KD +WNS+++ Q G + L LF M G
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ VT S+VL AC+ L A+ +G++IHG +V+ G + D+F +AL+DMY K
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHG-VVIKGPIRA-------DLFAESALIDMYGK 597
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ A VF M +K+ SWN +I YG G KE++ + M E K D VTF+ +
Sbjct: 598 CGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLAL 657
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+SAC+H+G + +G M Y + P +EH+ C++D+ RAG+L++A EL + MP +
Sbjct: 658 VSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKP 717
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W LL A R+H N +LAEIA+Q +F+L+P + G YVLMSNI G+++ V +R
Sbjct: 718 DAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRR 777
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE--HGDCCA 628
M+ V+K PG SW+++ + H F+++D+SHP+++ IY L S+ LRE HGD A
Sbjct: 778 LMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGHGDLIA 836
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 151/504 (29%), Positives = 257/504 (50%), Gaps = 19/504 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGI--IDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+A L+ C ++L G ++H + G+ D+ L T L+ MY + + A+ VF++L
Sbjct: 43 LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQ-TRLVGMYVLARRFRDAVAVFSSL 101
Query: 94 S--CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCLIKCCCDVMA 149
+N +I G L F+ M LPD +TFP ++K C + A
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +H LGLD D+++GSAL+ Y + +A +VF+ + RD VLWN M++G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y + G A+E+F M G + T+ LS G +H + VK G +S
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V N L+ MY K KC+ + ++F +M D+ +WN +++ Q G D L LF M
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G +PD VT ++LPA + L G+++HGYIV N C + DVF+ +AL+D+Y
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN-------CVHM-DVFLVSALVDIY 393
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC ++R AQ V+ DV + MI GY ++G +EA+ MF + E ++P+ V
Sbjct: 394 FKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIA 453
Query: 450 GVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL AC+ + G+E +++ Y +E + ++DM + G+L+ ++ + +
Sbjct: 454 SVLPACASMAAMKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYI-FSKI 510
Query: 509 NEANPVVWRTLLAASRLHGNTDLA 532
+ + V W +++++ +G + A
Sbjct: 511 SAKDEVTWNSMISSFAQNGEPEEA 534
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
++ T + L CA + G+EIH +++ I + ++LI+MY KC +++A V
Sbjct: 548 YSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRV 607
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F ++ E N ++N++I+ + + + + HM++ G D TF L+ C
Sbjct: 608 FESMP-EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQ 666
Query: 150 VLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
V E ++ + +++ ++ + + +V+ Y + +++A+++ ++P + D +W A
Sbjct: 667 VQEGLRLFRCMTEEYQIAPRMEHF--ACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGA 724
Query: 206 MVNGYAQIGEFHKALEVFRRMSKE 229
+++ H+ +E+ S+E
Sbjct: 725 LLHAC----RVHRNVELAEIASQE 744
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 330/586 (56%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G++IH+Y+LR+ + LI+ Y+KC ++K +F+ L + N
Sbjct: 250 LNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVK-N 308
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ MI+G+ N + ++ ++ M ++G PD+Y ++ C V A+ ++IH
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K+ L+ D ++ +AL++ Y KC +++A +VF+ + VV +NAM+ GY++ G
Sbjct: 369 YVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCG 428
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEVF+ M + + S T +L + + + +HG+++K G+ +ALID
Sbjct: 429 ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALID 488
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C+ +A +FE KDI WNS+ + + + +L+ + + +P+ T
Sbjct: 489 VYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFT 548
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ + A S LA+L HG+Q H ++ GL D F+ NAL+DMY KCGS+ +A
Sbjct: 549 FAALTTAASILASLPHGQQFHNQVMKMGLE--------SDPFITNALVDMYAKCGSVEEA 600
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ KD A WN MI Y G+ +EAL MF M + P+ VTFV VLSACSH
Sbjct: 601 EKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHV 660
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
GF+ G + M +RYG+ P IEHY V+ +LGRAG+L EA E M +VWR+
Sbjct: 661 GFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRS 719
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ GN +LA+ AA+ ++P G+YV++SNI+ + G + +V +R M V
Sbjct: 720 LLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGV 779
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PG SWIE+ +H F+S D+ H E IY L LT ++++ G
Sbjct: 780 VKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVG 825
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 256/506 (50%), Gaps = 16/506 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ + LA+ I + C + + G ++HSY++++G + TSL+ +Y+K ++ A
Sbjct: 141 NEYILASII---RACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKAR 197
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ L + V T+ A+I+G+ + + L FN M + V+PDKY ++ C +
Sbjct: 198 LVFDGLVLKTPV-TWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVL 256
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ K+IH V + +DV + L++ Y KC ++ +F+ L +++++ W M+
Sbjct: 257 GYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMI 316
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q +A+E+ M + G + + VL++ + ++GR +H V+K+ +
Sbjct: 317 AGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLE 376
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V NALIDMY K + +A +F+++ + +N+++ + + G G L +F M
Sbjct: 377 HDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEM 436
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
P +TF ++L + L L +QIHG I+ G + D F ++AL+D
Sbjct: 437 RLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSL--------DKFTSSALID 488
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y+KC +RDA+ VF + KD+ WN + GY + + +EA ++S + ++ +P+E T
Sbjct: 489 VYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFT 548
Query: 448 FVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
F + +A S L G++F +M+ P I + ++DM + G + EA E +
Sbjct: 549 FAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN--ALVDMYAKCGSVEEA-EKIFS 605
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLA 532
+ W ++++ HG + A
Sbjct: 606 SSVWKDTACWNSMISMYAQHGKVEEA 631
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/377 (31%), Positives = 197/377 (52%), Gaps = 9/377 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C + L C LQ G++IHSY+++ + +LI+MYSKC + A VF+ ++
Sbjct: 347 CSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT 406
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
C V+ YNAMI G+ + L+ F MR V P TF L+ ++ + K
Sbjct: 407 CHSVVY-YNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSK 465
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IHGL+ K G LD + SAL++ Y KC + +A VFE +D+V+WN++ +GY
Sbjct: 466 QIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQL 525
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ +A +++ + + FT + +A ++ +G+ H V+KMG +S + N
Sbjct: 526 KSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITN 585
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
AL+DMY K V EA +IF KD WNS+++++ Q G + LR+F+ M+S P
Sbjct: 586 ALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINP 645
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VTF +VL ACSH+ + G Q + N +A+ G I+ +++ + + G
Sbjct: 646 NYVTFVSVLSACSHVGFVEDGLQHY-----NSMARYGIEPGIEHY---ASVVTLLGRAGR 697
Query: 395 MRDAQMVFTKMSKKDVA 411
+ +A+ KM+ + A
Sbjct: 698 LTEAREFIEKMTIRPAA 714
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 217/436 (49%), Gaps = 11/436 (2%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLEVKKI 156
N+ ++++++S + + K L +F ++ V ++Y +I+ C ++
Sbjct: 105 NLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQV 164
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K G DVY+G++LV Y K +++A VF+ L L+ V W A++ GY + G
Sbjct: 165 HSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRS 224
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+L++F M + + ++ ++ +L+A ++G+ K G+ +H V++ V N L
Sbjct: 225 EVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVL 284
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
ID Y K V +F+ ++ K+I SW +++ + Q + L M G++PD
Sbjct: 285 IDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDE 344
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
S+VL +C + AL HGRQIH Y++ C + D+ F+ NAL+DMY+KC ++
Sbjct: 345 YACSSVLTSCGSVDALQHGRQIHSYVI-------KVCLEHDN-FVTNALIDMYSKCNALD 396
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA+ VF ++ V +N MI GY G AL++F M + P +TFV +L +
Sbjct: 397 DAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSA 456
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L ++ L+ +YG + +ID+ + + +A + N+ + VVW
Sbjct: 457 ALLCLQLSKQIHGLI-IKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNK-DIVVW 514
Query: 517 RTLLAASRLHGNTDLA 532
+L + L ++ A
Sbjct: 515 NSLFSGYNLQLKSEEA 530
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 200/412 (48%), Gaps = 37/412 (8%)
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S PNV M+ F S + KG N + L + +K ++L
Sbjct: 19 SISPNV---QPMLPSFSSQNVKVKGRALANLL--LAPVSNK--------------SILYY 59
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+K+H V GL DV++ + L+++Y K + +A +F+++P R++V W+++V+ Y Q+
Sbjct: 60 RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119
Query: 214 GEFHKALEVFRRMSKEGI-WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G KAL F + + ++ + + ++ A + + G VH V+K G+ V V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYV 179
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+L+ +Y K + +A +F+ + K +W +I+T + + G + +L+LF+ M+ +
Sbjct: 180 GTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNV 239
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD S++L ACS L L G+QIH Y++ + DV N L+D YTKC
Sbjct: 240 IPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKM--------DVSTYNVLIDFYTKC 291
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ + +F ++ K++ SW MI GY + EA+++ M KPDE VL
Sbjct: 292 GRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVL 351
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEH----YTCVIDMLGRAGQLNEA 500
++C L GR+ Y + +EH +IDM + L++A
Sbjct: 352 TSCGSVDALQHGRQI-----HSYVIKVCLEHDNFVTNALIDMYSKCNALDDA 398
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 335/586 (57%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L +CA + ++ G ++H ++R+G P ++I MYSKC + A +F+ + + +
Sbjct: 285 LSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP-QTD 343
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+N +I+G+ N F + + F M GV D TF + ++ K++H
Sbjct: 344 TVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHS 403
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G+ DVY+ SALV+ Y K +E A K F++ L DV + AM++GY G +
Sbjct: 404 YIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVE 463
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR + +EG+ + T+ VL A + K G+ +H ++K G ++ V +++
Sbjct: 464 ALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITY 523
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + A + F M KD WN ++ Q G + + LF +M ++G + D V+
Sbjct: 524 MYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVS 583
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S L AC++ AL +G+++H ++V N I D F+ + L+DMY+KCG + A
Sbjct: 584 LSATLSACANYPALYYGKELHCFVVRNSF--------ISDTFVASTLIDMYSKCGKLALA 635
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF M K+ SWN +I YG G+ +E LD+F M EA ++PD VTF+ ++SAC H+
Sbjct: 636 RSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHA 695
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G + M YG+ +EH+ C++D+ GRAG+L+EA++ +MP + W +
Sbjct: 696 GLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGS 755
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A RLHGN +LA++A++ + +L+P + G YVL+SN++ G++E VL +R M+++ V
Sbjct: 756 LLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGV 815
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PG SWI++ G H F ++D HP++ IY L +L LR+HG
Sbjct: 816 QKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHG 861
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 258/490 (52%), Gaps = 23/490 (4%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV---FTYNAM 105
Q+ ++IH+ +L G+ S + ++ MY C K NL C + +N +
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDV----GNLFCRLQLCYSLPWNWL 148
Query: 106 ISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
I GF DFA L FF M V PDKYTFP +IK C + V K +H L
Sbjct: 149 IRGFSMLGCFDFA---LMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARS 205
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
+G +D++IGS+L+ Y ++ +A +F+ELP+RD +LWN M+NGY + G+F+ AL
Sbjct: 206 MGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGT 265
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F+ M + + + +LS G + G +HG+V++ G++S V N +I MY K
Sbjct: 266 FQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSK 325
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ +A +IF++M + D +WN ++ + Q G D + LF M+++G + D +TF++
Sbjct: 326 CGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASF 385
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LP+ +L + +++H YIV +G+ DV++ +AL+D+Y K G + A F
Sbjct: 386 LPSVLKSGSLKYCKEVHSYIVRHGVPF--------DVYLKSALVDIYFKGGDVEMACKTF 437
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ + DVA MI GY ++G EAL++F + + + P+ +T VL AC+ L
Sbjct: 438 QQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLK 497
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G+E L + G+ + + + M ++G+L+ AY+ MP + + V W ++ +
Sbjct: 498 LGKE-LHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVS 555
Query: 523 SRLHGNTDLA 532
+G +LA
Sbjct: 556 FSQNGKPELA 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 129/291 (44%), Gaps = 15/291 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +L+ G+E+H +L+ G+ + +S+ MY+K ++ A F +
Sbjct: 482 TMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V +N MI F N +D F M G D + + C + A+
Sbjct: 542 PVKDSV-CWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYG 600
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H V + D ++ S L++ Y KC + A VF+ + ++ V WN+++ Y
Sbjct: 601 KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNH 660
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-------FFKNGRVVHGIVVKMGY 266
G + L++F M + GI T ++SA G +F+ +GI +M +
Sbjct: 661 GRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEH 720
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
++D+YG+ + EA + + M D +W S++ GN
Sbjct: 721 ------FACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGN 765
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/718 (32%), Positives = 362/718 (50%), Gaps = 108/718 (15%)
Query: 2 LSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
L K+S++N SS ST + TF TL+ L C NL++ I S M+ T
Sbjct: 12 LMKLSKLNQLSSALK-STFNHKPTFKPTITLSILETHLHNC---HNLKQFNRILSQMILT 67
Query: 62 GIIDSPLSITSLINMY--SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
G I + + L+ S + Y+L +F+ + N F +N M+ + ++ A K L
Sbjct: 68 GFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIE-NSNGFMWNTMMRAYIQSNSAEKAL 126
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD------------- 166
+ M + V PD YT+P +++ C + K+IH V K+G D
Sbjct: 127 LLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMY 186
Query: 167 ------------------LDVYIGSALVNTYLKCQFMEEALKVFEELPLR---------- 198
LD ++++ Y+K +EEA +F+++P R
Sbjct: 187 AVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIV 246
Query: 199 ---------------------DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
D+V W+A+++GY Q G + +AL +F M+ G+ +
Sbjct: 247 LLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVV 306
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY-GKG------------- 283
V VLSA + K G+++HG+V++MG +S V + NALI MY G G
Sbjct: 307 VVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSH 366
Query: 284 ---------------KC--VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
KC V +A +F++M EKDI SW+++++ + Q TL LF
Sbjct: 367 NLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHE 426
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M +PD +V+ AC+HLAAL G+ +H YI NGL N V + L+
Sbjct: 427 MQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVN--------VILGTTLL 478
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG + +A VF M +K V+SWN +I+G ++G + +LDMFS M + P+E+
Sbjct: 479 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 538
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+GVL AC H G + +GR M ++G+ P ++HY C++D+LGRAG LNEA +L +
Sbjct: 539 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 598
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP + W LL A + HG+T++ E +++ +L+P H G +VL+SNI+ + G +E+V
Sbjct: 599 MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDV 658
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
L++R M+QQ V K PGCS IE +H F++ D++HP + L+ + RL+ G
Sbjct: 659 LEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEG 716
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 348/594 (58%), Gaps = 15/594 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCC-QMKYALFVFNNLS 94
A ++ C++ G+ I+ ++++TG +++ + + LI+M+ K + A VF+ +
Sbjct: 133 AVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 192
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
E N+ T+ MI+ F A +D F M G +PD++T+ ++ C ++ + K
Sbjct: 193 -ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 251
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVLWNAMVNGYA 211
++H V +LGL LDV +G +LV+ Y KC ++++ KVFE++P +V+ W A++ Y
Sbjct: 252 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 311
Query: 212 QIGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q GE K A+E+F +M I + F+ + VL A + G V+ VK+G S
Sbjct: 312 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 371
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY + + +A + F+++ EK++ S+N+I+ + + + LF+ +
Sbjct: 372 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 431
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G TF+++L + + A+ G QIHG ++ G K+ C + NAL+ MY+
Sbjct: 432 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQC-------ICNALISMYS 483
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG++ A VF +M ++V SW MI G+ G AL+MF M E KP+E+T+V
Sbjct: 484 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 543
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G +S+G++ M +G+VP +EHY C++D+LGR+G L EA E +MP
Sbjct: 544 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 603
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +VWRTLL A R+HGNT+L AA+ + + EP Y+L+SN++ + G++++V+ IR
Sbjct: 604 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 663
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+M+++N+ K GCSWIE+++ +H F + SHP+A IY EL L ++++E G
Sbjct: 664 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 717
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 271/518 (52%), Gaps = 18/518 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FST N P L T L+ C N Q G+ +H ++++G+ + + +LI++
Sbjct: 11 FSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISL 70
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
YSKC + A +F + + ++ +++AM+S F +N ++ + F M +LG P++Y
Sbjct: 71 YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYC 130
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEE 194
F +I+ C + + I+G V K G L+ DV +G L++ ++K + A KVF++
Sbjct: 131 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 190
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R++V W M+ +AQ+G A+++F M G RFT + VLSA +G G
Sbjct: 191 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 250
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK---GKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ +H V+++G V V +L+DMY K V ++ ++FE M E ++ SW +I+T +
Sbjct: 251 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 310
Query: 312 EQCGNHDG-TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G D + LF +M+S +P+ +FS+VL AC +L+ G Q++ Y V G+A +
Sbjct: 311 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-S 369
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+C + N+L+ MY + G M DA+ F + +K++ S+N ++ GY + + +EA
Sbjct: 370 VNC-------VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 422
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVID 489
+F+ + + + TF +LS + G + +G + L++ Y I +I
Sbjct: 423 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALIS 480
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M R G + A+++ M + N + W +++ HG
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHG 517
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 14/327 (4%)
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+G H A M+++ T + +L + I F+ G++VH +++ G + V
Sbjct: 4 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 63
Query: 273 MNALIDMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+N LI +Y K A IFE M ++D+ SW+++++ + F ML G
Sbjct: 64 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 123
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F P+ F+ V+ ACS+ G I+G++V G + DV + L+DM+ K
Sbjct: 124 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA-------DVCVGCELIDMFVK 176
Query: 392 -CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
G + A VF KM ++++ +W +MI + G ++A+D+F M + PD T+
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 236
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA---GQLNEAYELALAM 507
VLSAC+ G L+ G++ + R G+ + ++DM + G ++++ ++ M
Sbjct: 237 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 295
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEI 534
P E N + W ++ A G D I
Sbjct: 296 P-EHNVMSWTAIITAYVQSGECDKEAI 321
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/588 (34%), Positives = 339/588 (57%), Gaps = 11/588 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C ++ G+ +H + G +SLI YS+ + A ++F+ + +
Sbjct: 154 IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG 213
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N M++G+ N F MR+ P+ TF C++ C + + ++HG
Sbjct: 214 VL-WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 159 LVFKLGLDLDVYIGS--ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
LV GL++D + + AL++ Y KC+ +E A K+F++ D+V+ AM++GY G
Sbjct: 273 LVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN 332
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ ALE+FR + +E + + T+ VL A + G+ +HG ++K G+ V +A+
Sbjct: 333 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 392
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K + A + F + +KD WNS++T Q G + + LF +M AG + D
Sbjct: 393 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 452
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
V+ S L AC++L AL +G++IH +++ D+F +AL+DMY+KCG++
Sbjct: 453 VSISAALSACANLPALHYGKEIHAFMMRGAFRS--------DLFAESALIDMYSKCGNLD 504
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A VF M +K+ SWN +I YG G+ K++L++F M ++PD VTF+ ++SAC
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G + +G + M G++ +EHY C++D+ GRAG+LNEA+ + +MP + VW
Sbjct: 565 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 624
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL A RLHGN +LAE+A++ +F L+P + G YVL+SN++ G++E VL IR M+++
Sbjct: 625 GTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKER 684
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PGCSWI++ + H F+++DRSHP++ IY L +L LR+ G
Sbjct: 685 GVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEG 732
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 262/503 (52%), Gaps = 31/503 (6%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS- 94
++ LQ C + L +G++ H+ ML GI + + T L+ MY C A +F L
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 95 --CEPNVFTYNAMISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
EP +N MI GF DFA L F+ M G LPDKYTFP +IK C + +
Sbjct: 110 WCSEP----WNWMIRGFTMMGQFDFA---LLFYFKMLGCGTLPDKYTFPYVIKACGGLNS 162
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V + +H + +G +LDV++GS+L+ Y + + +A +F+ +P +D VLWN M+NG
Sbjct: 163 VALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL---IMMGFFKNGRVVHGIVVKMGY 266
Y + G++ A VF M + + T VLS IM+ F G +HG+VV G
Sbjct: 223 YVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINF---GSQLHGLVVSSGL 279
Query: 267 DSGVPVMN--ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ PV N ALID+Y K + V A +IF+ DI ++++ + G ++ L +F
Sbjct: 280 EMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF 339
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+L + + VT ++VLPAC+ LAAL G+++HG+I+ NG GSC ++ +A
Sbjct: 340 RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG--HGGSC------YVGSA 391
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
+MDMY KCG + A F +S KD WN MI +G+ +EA+D+F M A K D
Sbjct: 392 IMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYD 451
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
V+ LSAC++ L G+E M R + + +IDM + G L+ A +
Sbjct: 452 CVSISAALSACANLPALHYGKEIHAFM-MRGAFRSDLFAESALIDMYSKCGNLDLACRVF 510
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
M E N V W +++AA HG
Sbjct: 511 DTM-EEKNEVSWNSIIAAYGNHG 532
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 199/395 (50%), Gaps = 12/395 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C D + + ++ H + G+ + +G+ L+ Y+ C +A +F +L L
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
WN M+ G+ +G+F AL + +M G ++T V+ A + GRVVH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ MG++ V V ++LI Y + C+ +A +F+ M KD WN ++ + + G+ D
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+F M P+ VTF+ VL C+ + G Q+HG +V +GL ++D
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL-------EMDSP 284
Query: 380 FMNN-ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
N AL+D+Y KC + A+ +F + + D+ MI GY ++G AL++F + +
Sbjct: 285 VANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ 344
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+++ + VT VL AC+ L+ G+E ++++ +G + + ++DM + G+L
Sbjct: 345 ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRL 402
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ A++ + + ++ + V W +++ + +G + A
Sbjct: 403 DLAHQTFIGISDK-DAVCWNSMITSCSQNGKPEEA 436
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G+E+H ++L+ G S +++++MY+KC ++ A F +
Sbjct: 353 TLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGI 412
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + + +N+MI+ N + +D F M G D + + C ++ A+
Sbjct: 413 S-DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH + + D++ SAL++ Y KC ++ A +VF+ + ++ V WN+++ Y
Sbjct: 472 KEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNH 531
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G +L +F M +GI T ++SA G G + ++G + +
Sbjct: 532 GRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEH 591
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
++D++G+ + EA + M D W +++ GN
Sbjct: 592 YACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGN 636
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 348/594 (58%), Gaps = 15/594 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCC-QMKYALFVFNNLS 94
A ++ C++ G+ I+ ++++TG +++ + + LI+M+ K + A VF+ +
Sbjct: 151 AVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMP 210
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
E N+ T+ MI+ F A +D F M G +PD++T+ ++ C ++ + K
Sbjct: 211 -ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVLWNAMVNGYA 211
++H V +LGL LDV +G +LV+ Y KC ++++ KVFE++P +V+ W A++ Y
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329
Query: 212 QIGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q GE K A+E+F +M I + F+ + VL A + G V+ VK+G S
Sbjct: 330 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 389
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY + + +A + F+++ EK++ S+N+I+ + + + LF+ +
Sbjct: 390 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 449
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G TF+++L + + A+ G QIHG ++ G K+ C + NAL+ MY+
Sbjct: 450 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQC-------ICNALISMYS 501
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG++ A VF +M ++V SW MI G+ G AL+MF M E KP+E+T+V
Sbjct: 502 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 561
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G +S+G++ M +G+VP +EHY C++D+LGR+G L EA E +MP
Sbjct: 562 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 621
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +VWRTLL A R+HGNT+L AA+ + + EP Y+L+SN++ + G++++V+ IR
Sbjct: 622 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 681
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+M+++N+ K GCSWIE+++ +H F + SHP+A IY EL L ++++E G
Sbjct: 682 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMG 735
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 271/518 (52%), Gaps = 18/518 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FST N P L T L+ C N Q G+ +H ++++G+ + + +LI++
Sbjct: 29 FSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISL 88
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
YSKC + A +F + + ++ +++AM+S F +N ++ + F M +LG P++Y
Sbjct: 89 YSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYC 148
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEE 194
F +I+ C + + I+G V K G L+ DV +G L++ ++K + A KVF++
Sbjct: 149 FAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDK 208
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R++V W M+ +AQ+G A+++F M G RFT + VLSA +G G
Sbjct: 209 MPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG 268
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK---GKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ +H V+++G V V +L+DMY K V ++ ++FE M E ++ SW +I+T +
Sbjct: 269 KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAY 328
Query: 312 EQCGNHDG-TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G D + LF +M+S +P+ +FS+VL AC +L+ G Q++ Y V G+A +
Sbjct: 329 VQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA-S 387
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+C + N+L+ MY + G M DA+ F + +K++ S+N ++ GY + + +EA
Sbjct: 388 VNC-------VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 440
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVID 489
+F+ + + + TF +LS + G + +G + L++ Y I +I
Sbjct: 441 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCI--CNALIS 498
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M R G + A+++ M + N + W +++ HG
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKHG 535
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 156/327 (47%), Gaps = 14/327 (4%)
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+G H A M+++ T + +L + I F+ G++VH +++ G + V
Sbjct: 22 VGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVV 81
Query: 273 MNALIDMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+N LI +Y K A IFE M ++D+ SW+++++ + F ML G
Sbjct: 82 LNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELG 141
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F P+ F+ V+ ACS+ G I+G++V G + DV + L+DM+ K
Sbjct: 142 FYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA-------DVCVGCELIDMFVK 194
Query: 392 -CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
G + A VF KM ++++ +W +MI + G ++A+D+F M + PD T+
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 254
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA---GQLNEAYELALAM 507
VLSAC+ G L+ G++ + R G+ + ++DM + G ++++ ++ M
Sbjct: 255 VLSACTELGLLALGKQLHSRV-IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 313
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEI 534
P E N + W ++ A G D I
Sbjct: 314 P-EHNVMSWTAIITAYVQSGECDKEAI 339
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/591 (34%), Positives = 336/591 (56%), Gaps = 19/591 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ SL +L+ ++ HS +L G+ + T LI Y+ C ++ VF++L
Sbjct: 27 LQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQ- 85
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NVF +N++I+G N + FN M VLPD +T L K ++ A+ K
Sbjct: 86 HKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKS 145
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + G D + +++++ Y KC +E+ KVF+E+ +R+ WN ++ GYA G
Sbjct: 146 IHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGN 205
Query: 216 FH---KALEVFRRMSKEGIWMSRFTVTGVLSALIM-MGFFKNGRVVHGIVVK----MGYD 267
+ + E ++M + + +T++ +L MG + GR +H +VK +G D
Sbjct: 206 CNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLD 265
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF-DR 326
S V + LIDMY + V +F+ M+ +++FSW +++ + + G+ D L LF D
Sbjct: 266 SDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDM 325
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ G +P+ V+ +VLPACS + L+ GRQIHG+ V L ++V + NAL+
Sbjct: 326 QVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELN--------NEVSLCNALI 377
Query: 387 DMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
DMY+KCGS+ A+ VF S KD SW+ MI GYG+ G+G+EA+ ++ M +A ++PD
Sbjct: 378 DMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDM 437
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+T VG+LSAC SG +++G + + YG+ PT+E C++DMLGRAGQL+ A +
Sbjct: 438 ITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIK 497
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
A+P E P VW L++ S +HG+ ++ E+A + + QLEP + NYV +SN+Y + +++
Sbjct: 498 AIPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDA 557
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
V ++R M+ + +RK PGCSWI + + H F +D++HP + SIY L L
Sbjct: 558 VAEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDL 608
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 335/593 (56%), Gaps = 16/593 (2%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL--FVFNNLSC 95
SL L + ++ + +I S+ + +G+ P+ ++S + YS +A +F +
Sbjct: 31 SLSLLQNLSHPRSFNQILSHAIASGVFRDPV-VSSKLLYYSLSHDHDFAFSRTLFFQIH- 88
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+PNVF++N M + + F + + +N M + G LPD Y+FP ++K C + + + ++
Sbjct: 89 KPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGRE 148
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP--LRDVVLWNAMVNGYAQI 213
IH KLG+ LDV++ +AL++ + C +E A VF+ LP +RDVV WN+M++GY Q
Sbjct: 149 IHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQS 208
Query: 214 GEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ AL+VF + +G + T+ LS +G G+ +HG+ G+ V V
Sbjct: 209 HRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFV 268
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
++LIDMY K + +A ++F+ + ++ W S++ + Q + LF M GF
Sbjct: 269 GSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGF 328
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D T + VL AC H AL GR IH Y N + D+ NAL+ MY+KC
Sbjct: 329 AADAATIACVLSACGHWGALAQGRWIHLYCERNSIEM--------DLNARNALIGMYSKC 380
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGV 451
G ++ A +F +++ D+ SW+ +I G M+G+ +AL +FS M + ++P+E+TF+GV
Sbjct: 381 GDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGV 440
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+H GF+ +G + M Y + P IEHY C++D+LGRA L EA + +P +
Sbjct: 441 LCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQP 500
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ V+WR+LL A R HGN +LAE AA+++ +LEP CG VL+SN+Y + ++ +V +R
Sbjct: 501 DVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRK 560
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M Q ++K PGCS++E+ +H +DRSHPE +IY + S+ L+ G
Sbjct: 561 DMATQRIKKQPGCSFVEIDGLVHELFVADRSHPEMGAIYETMISINKALQSKG 613
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +++L +C L G++IH +G + +SLI+MYSKC Q++ A VF+ +
Sbjct: 233 TLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRI 292
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
N + +MI+G+ +D + ++ F M+ G D T C++ C A+ +
Sbjct: 293 P-HRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQG 351
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH + +++D+ +AL+ Y KC +++AL++F L D+ W+A+++G A
Sbjct: 352 RWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMN 411
Query: 214 GEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVP 271
GE KAL +F +M I + T GVL A GF G + ++ G+
Sbjct: 412 GESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIE 471
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNH 317
++D+ G+ + EA + + + D+ W S++ C NH
Sbjct: 472 HYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFA---CRNH 515
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 15/195 (7%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT L C H L +G+ IH Y R I + +LI MYSKC ++ AL +F+
Sbjct: 333 ATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHG 392
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCD----V 147
L+ +P++F+++A+ISG N + K L F+ M + + P++ TF ++ C C+ V
Sbjct: 393 LT-QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVL-CACNHGGFV 450
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
L ++ L ++ Y +V+ + + EA K LP++ DVV+W ++
Sbjct: 451 DKGLYYFNAMTQIYNLTPGIEHY--GCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSL 508
Query: 207 V-----NGYAQIGEF 216
+ +G ++ EF
Sbjct: 509 LFACRNHGNIELAEF 523
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/607 (34%), Positives = 331/607 (54%), Gaps = 13/607 (2%)
Query: 33 ATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT + SL +CA + G IHS LR+ + S I +L+NMYS ++ A F+F
Sbjct: 246 ATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+S ++ ++N MIS + N + L + +P+ TF + C A++
Sbjct: 306 NMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K +H +V +L L ++ +G++L+ Y KC ME+A KVF+ +P DVV +N ++ GYA
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGV 270
+ + KA++VF + GI + T+ + + N GR +H +++ G+ S
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY K + + IF + K+I SWN+I+ + Q G+ + L+LF M A
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHA 544
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + D V + L +C+ LA+L G Q+HG + +GL D ++ NA MDMY
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDS--------DSYVVNAAMDMYG 596
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M + + + + WN +I GY G KEA + F M KPD VTFV
Sbjct: 597 KCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVA 656
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACSH+G + +G ++ M S +GV P I+H C++D+LGR G+ EA MP
Sbjct: 657 LLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVL 716
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N ++WR+LL++SR H N ++ AA+++ +L+P YVL+SN+Y ++ +V +R
Sbjct: 717 PNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLR 776
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC--A 628
M+ N+ K P CSW++LK+ + TF DR H A+ IYA+L + +LRE G +
Sbjct: 777 SHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTS 836
Query: 629 GTLFDSD 635
L D+D
Sbjct: 837 SALHDTD 843
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 249/520 (47%), Gaps = 15/520 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ + + + + G IH+ R G++ + T+L+++Y + A +
Sbjct: 42 FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRL 101
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E NV ++ A++ SN + + L + MR+ GV + F ++ C +
Sbjct: 102 FWEMP-ERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLEN 160
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++ V GL V + ++L+ + +++A K+F+ + D + NAM++
Sbjct: 161 EVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISM 220
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+ G K VF M G+ T+ ++S F +G +H + ++ DS
Sbjct: 221 YSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSS 280
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V+NAL++MY + +A +F M +D+ SWN++++ + Q N L+ ++
Sbjct: 281 VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFH 340
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ +TFS+ L ACS AL+ G+ +H ++ L +N + + N+L+ MY
Sbjct: 341 TNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN--------LLVGNSLITMY 392
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC SM DA+ VF M DV S+N++I GY + G +A+ +FS + A +KP+ +T +
Sbjct: 393 GKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMI 452
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ + + S L L R G + +I M + G L + + ++ N
Sbjct: 453 NIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 512
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ N V W ++AA+ G+ + A ++F ++ H GN
Sbjct: 513 K-NIVSWNAIIAANAQLGHGE----EALKLF-IDMQHAGN 546
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/594 (34%), Positives = 325/594 (54%), Gaps = 11/594 (1%)
Query: 33 ATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT + SL +CA + G IHS LR+ + S I +L+NMYS ++ A F+F
Sbjct: 246 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+S ++ ++N MIS + N + L + P+ TF + C A++
Sbjct: 306 NMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K +H +V +L L ++ +G++L+ Y KC ME+A KVF+ +P D+V +N ++ GYA
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGV 270
+ + KA++VF M GI + T+ + + N GR +H +++ G+ S
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY K + + IF + K+I SWN+I+ + Q G+ + L+LF M A
Sbjct: 485 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 544
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + D V + L +C+ LA+L G Q+HG + +GL D ++ NA MDMY
Sbjct: 545 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDS--------DSYVVNAAMDMYG 596
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M + V + + WN +I GY G KEA + F M KPD VTFV
Sbjct: 597 KCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVA 656
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACSH+G + +G ++ M S +GV P I+H C++D+LGR G+ EA + MP
Sbjct: 657 LLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVL 716
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N ++WR+LL++SR H N ++ A+++ +L+P YVL+SN+Y ++ +V +R
Sbjct: 717 PNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLR 776
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ N+ K P CSW++LK+ + TF DR H A+ IYA+L + +LRE G
Sbjct: 777 SHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVG 830
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 237/494 (47%), Gaps = 10/494 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ + + + + G IH+ R G++ + T+L+++Y + A +
Sbjct: 42 FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRL 101
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E NV ++ A++ SN + + L + MR+ GV + F ++ C +
Sbjct: 102 FWEMP-ERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLEN 160
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++ V GL V + ++L+ + + +A K+F+ + D + WNAM++
Sbjct: 161 EVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISM 220
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+ G K VF M G+ T+ ++S F +G +H + ++ DS
Sbjct: 221 YSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS 280
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V+NAL++MY + +A +F M +D+ SWN++++ + Q N L+ ++
Sbjct: 281 VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFH 340
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ +TFS+ L ACS AL+ G+ +H ++ L +N + + N+L+ MY
Sbjct: 341 TNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN--------LLVGNSLITMY 392
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC SM DA+ VF M D+ S+N++I GY + G +A+ +FS M A +KP+ +T +
Sbjct: 393 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 452
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ + + S L L R G + +I M + G L + + ++ N
Sbjct: 453 NIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 512
Query: 510 EANPVVWRTLLAAS 523
+ N V W ++AA+
Sbjct: 513 K-NIVSWNAIIAAN 525
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 337/619 (54%), Gaps = 31/619 (5%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ N TF PF L C A L H G+ IH + + G+ T+L++MY
Sbjct: 121 VAPNNYTF--PFALKACSA---LADHHC----GRAIHRHAIHAGLQADLFVSTALLDMYV 171
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVL-PDKYT 136
KC + A +F + ++ +NAM++G+ + + M+ Q+ L P+ T
Sbjct: 172 KCACLPDAAHIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 230
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----------VYIGSALVNTYLKCQFME 186
L+ A+ + +H + L + V +G+AL++ Y KC +
Sbjct: 231 LVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLL 290
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSAL 245
A +VF+ +P R+ V W+A++ G+ +A +F+ M +G+ ++S ++ L A
Sbjct: 291 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 350
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + G +H ++ K G + + N+L+ MY K + +A+ +F+ M KD S++
Sbjct: 351 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++++ + Q G + +F +M + +PD T +++PACSHLAAL HGR HG +++
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA S + NAL+DMY KCG + ++ VF M +D+ SWN MI GYG+ G
Sbjct: 471 GLASETS--------ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
GKEA +F M PD VTF+ +LSACSHSG + +G+ + +M YG+ P +EHY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYI 582
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+L R G L+EAYE +MP A+ VW LL A R++ N DL + ++ + +L P
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
GN+VL+SNIY A G+++E ++R + Q +K+PGCSWIE+ LH F+ D+SHP+
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Query: 606 AKSIYAELHSLTARLREHG 624
+ IY EL ++ +++ G
Sbjct: 703 SPEIYRELDNILVGIKKLG 721
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 215/452 (47%), Gaps = 35/452 (7%)
Query: 96 EPNVFTYNAMISGFYSND--FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+V TYN +I + S+ A GL + M + V P+ YTFP +K C +
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH GL D+++ +AL++ Y+KC + +A +F +P RD+V WNAM+ GYA
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 214 GEFHKALEVFRRMSKEGIWMSRF-----TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G +H A+ M + M R T+ +L L G G VH ++ S
Sbjct: 205 GMYHHAVAHLLSMQMQ---MHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHS 261
Query: 269 ----------GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
GV + AL+DMY K + A +F+ M ++ +W++++ C
Sbjct: 262 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321
Query: 319 GTLRLFDRMLSAG---FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
LF ML+ G P + ++ L AC+ L L G Q+H LAK+G D
Sbjct: 322 QAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHAL-----LAKSGVHAD 374
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ N+L+ MY K G + A +F +M+ KD S++ ++ GY +G+ +EA +F
Sbjct: 375 LT---AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M ++PD T V ++ ACSH L GR + R G+ +IDM + G
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKCG 490
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+++ + ++ MP+ + V W T++A +HG
Sbjct: 491 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 12/328 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA--LEVFRRMSKEGIWMSRFTVTGVL 242
+ A +F+++P DV +N ++ Y+ A L ++RRM + + + +T L
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A + GR +H + G + + V AL+DMY K C+ +A IF M +D+
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 303 SWNSIMTVHEQCG--NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+WN+++ + G +H L +M +P+ T +LP + AL G +H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 361 YIVVNGLA--KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
Y + L +N K D V + AL+DMY KCGS+ A+ VF M ++ +W+ +I
Sbjct: 253 YRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312
Query: 419 GYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
G+ + + +A +F M L P + L AC+ L G + L+ ++
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALL-AKS 369
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
GV + ++ M +AG +++A L
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIAL 397
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 337/619 (54%), Gaps = 31/619 (5%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ N TF PF L C A L H G+ IH + + G+ T+L++MY
Sbjct: 6 VAPNNYTF--PFALKACSA---LADHHC----GRAIHRHAIHAGLQADLFVSTALLDMYV 56
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVL-PDKYT 136
KC + A +F + ++ +NAM++G+ + + M+ Q+ L P+ T
Sbjct: 57 KCACLPDAAHIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 115
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----------VYIGSALVNTYLKCQFME 186
L+ A+ + +H + L + V +G+AL++ Y KC +
Sbjct: 116 LVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSAL 245
A +VF+ +P R+ V W+A++ G+ +A +F+ M +G+ ++S ++ L A
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + G +H ++ K G + + N+L+ MY K + +A+ +F+ M KD S++
Sbjct: 236 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++++ + Q G + +F +M + +PD T +++PACSHLAAL HGR HG +++
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA S + NAL+DMY KCG + ++ VF M +D+ SWN MI GYG+ G
Sbjct: 356 GLASETS--------ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
GKEA +F M PD VTF+ +LSACSHSG + +G+ + +M YG+ P +EHY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+L R G L+EAYE +MP A+ VW LL A R++ N DL + ++ + +L P
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
GN+VL+SNIY A G+++E ++R + Q +K+PGCSWIE+ LH F+ D+SHP+
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Query: 606 AKSIYAELHSLTARLREHG 624
+ IY EL ++ +++ G
Sbjct: 588 SPEIYRELDNILVGIKKLG 606
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 10/285 (3%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + + + +T L A + GR +H + G + + V AL+DMY K C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCG--NHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ +A IF M +D+ +WN+++ + G +H L +M +P+ T +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 344 PACSHLAALMHGRQIHGYIVVNGLA--KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
P + AL G +H Y + L +N K D V + AL+DMY KCGS+ A+ V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSACSHS 458
F M ++ +W+ +I G+ + + +A +F M L P + L AC+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
L G + L+ ++ GV + ++ M +AG +++A L
Sbjct: 239 DHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/595 (31%), Positives = 330/595 (55%), Gaps = 12/595 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ +L+ C ++ G+ +H Y ++T ++S ++L++MY K ++
Sbjct: 68 PFILSL---ALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + NV ++ A+I+G + + L +F+ M V D YTF +K C D
Sbjct: 125 VFKEMPLR-NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ ++IH K G ++ + L Y KC ++ L++FE + RDVV W ++
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
QIG+ A++ FRRM + + + FT V+S +G + G +H V++ G
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+++ MY K + A +F+ + +DI SW+++++ + Q G + M
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +P+ F++VL C ++A L G+Q+H +++ GL +N + +AL++M
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQN--------TMVQSALINM 415
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCGS+++A +F + ++ SW MI GY G +EA+D+F + + L+PD VTF
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTF 475
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL+ACSH+G + G + + + + P+ +HY C+ID+L RAG+LN+A + +MP
Sbjct: 476 IAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMP 535
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VVW TLL A R+HG+ D + AA+++ QL+P ++ ++N+Y A GK++E +
Sbjct: 536 FQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAE 595
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+R M+ + V K PG SWI+ KD + F+S DRSHPE + IY L L ++ H
Sbjct: 596 VRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAEMH 650
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 211/434 (48%), Gaps = 11/434 (2%)
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ +ISG+ + + L F+ M + G+ D + +K C M+V + +HG
Sbjct: 33 ISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHG 92
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K V++GSALV+ Y+K ++E VF+E+PLR+VV W A++ G + G +
Sbjct: 93 YSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKE 152
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL F M + + +T + L A G GR +H +K G+ + V N L
Sbjct: 153 ALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLAT 212
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + L +FE M ++D+ SW +I+ + Q G + ++ F RM P+ T
Sbjct: 213 MYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFT 272
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ V+ C+ L + G Q+H +++ GL +D + + N++M MY+KC + A
Sbjct: 273 FAAVISGCATLGRIEWGEQLHAHVIRRGL--------VDSLSVANSIMAMYSKCWQLDLA 324
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF +S++D+ SW+ MI GY G G+EA D S M +P+E F VLS C +
Sbjct: 325 STVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNM 384
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L QG++ + G+ + +I+M + G + EA ++ N V W
Sbjct: 385 AILEQGKQLHAHVLC-VGLEQNTMVQSALINMYSKCGSIKEASKI-FDEAEYNNIVSWTA 442
Query: 519 LLAASRLHGNTDLA 532
++ HG + A
Sbjct: 443 MINGYAEHGYSQEA 456
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 165/349 (47%), Gaps = 11/349 (3%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWM 233
++ +K + A ++F+++ RD + W +++GY +AL +F +M E G+ M
Sbjct: 7 VLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
F ++ L A + G +HG VK + + V V +AL+DMY K V E +F
Sbjct: 67 DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVF 126
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M +++ SW +I+ + G + L F M D TFS+ L AC+ AL
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALN 186
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+GR+IH + G F+ N L MY KCG + +F M+++DV SW
Sbjct: 187 YGREIHCQTLKKGFTAVS--------FVANTLATMYNKCGKLDYGLRLFESMTQRDVVSW 238
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+I+ GQ + A+ F M E + P+E TF V+S C+ G + G E L
Sbjct: 239 TTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG-EQLHAHVI 297
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
R G+V ++ ++ M + QL+ A + + + + W T+++
Sbjct: 298 RRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR-DIISWSTMISG 345
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKL 441
N ++ K G + +A+ +F KM ++D SW +I GY EAL +FS M E L
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
D L AC + +S G E L + V ++ + ++DM + G+++E
Sbjct: 65 HMDPFILSLALKACGLNMSVSFG-ESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123
Query: 502 ELALAMPNEANPVVWRTLLAA 522
+ MP N V W ++A
Sbjct: 124 IVFKEMPLR-NVVSWTAIIAG 143
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 339/590 (57%), Gaps = 15/590 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L + A Q + G+ +H+ ++ G + SL+NMY+KC ++ A VF + +
Sbjct: 212 LSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETR-D 270
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +++G N + L F+ R + + T+ +IK C ++ + +++H
Sbjct: 271 MVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHS 330
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFH 217
V K G + +AL++ Y K + AL +F + ++VV W AM+NG Q G+
Sbjct: 331 SVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A +F RM ++G+ + FT + +L+A + +H V+K Y+ V AL+
Sbjct: 391 LAAALFSRMREDGVAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVGTALL 446
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
Y K EAL IF+M+++KD+ SW++++T + Q G+ DG +F +M G +P+
Sbjct: 447 ASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEF 506
Query: 338 TFSTVLPAC-SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S+V+ AC S A + GRQ H + + C D + +++AL+ MY + GS+
Sbjct: 507 TISSVIDACASPTAGVDLGRQFHAISIKH------RCHDA--LCVSSALVSMYARKGSIE 558
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
AQ +F + + +D+ SWN M+ GY G ++ALD+F M ++ D VTF+ V+ C+
Sbjct: 559 SAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCA 618
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G + +G+ + M YG+ PT+EHY C++D+ RAG+L+EA L M A P+VW
Sbjct: 619 HAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVW 678
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
RTLL A ++H N +L ++AA+++ LEP YVL+SNIY A GK++E ++R M +
Sbjct: 679 RTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
V+K GCSWI++K+ +H+FI+SD+SHP ++ IYA+L ++T +L++ G C
Sbjct: 739 KVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYC 788
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/500 (26%), Positives = 236/500 (47%), Gaps = 18/500 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLS 94
+ L++C + G+++H +R G + + TSL++MY K + VF +
Sbjct: 107 VGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMP 166
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
+ NV T+ ++++G+ + ++ F MR GV P+ TF ++ V +
Sbjct: 167 -KRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGR 225
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H K G V++ ++L+N Y KC +EEA VF + RD+V WN ++ G G
Sbjct: 226 RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL++F +++ T V+ + R +H V+K G+ S VM
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345
Query: 275 ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+D Y K +G AL+IF +M +++ SW +++ Q G+ LF RM G
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ T+ST+L A +A+L QIH ++ N C I + AL+ Y+K
Sbjct: 406 PNDFTYSTILTAS--VASL--PPQIHAQVI----KTNYECTSI----VGTALLASYSKLC 453
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ +A +F + +KDV SW+ M+ Y G A ++F M LKP+E T V+
Sbjct: 454 NTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVID 513
Query: 454 AC-SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC S + + GR+F + ++ + + ++ M R G + E+ + + +
Sbjct: 514 ACASPTAGVDLGRQFHAI-SIKHRCHDALCVSSALVSMYARKGSI-ESAQCIFERQTDRD 571
Query: 513 PVVWRTLLAASRLHGNTDLA 532
V W ++L+ HG + A
Sbjct: 572 LVSWNSMLSGYAQHGYSQKA 591
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 191/378 (50%), Gaps = 12/378 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
T +T ++LCA+ L +++HS +L+ G +T+L++ YSK Q+ AL +
Sbjct: 304 LTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDI 363
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F +S NV ++ AMI+G N F+ MR+ GV P+ +T+ ++ +
Sbjct: 364 FLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLP 423
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+IH V K + +G+AL+ +Y K EEAL +F+ + +DVV W+AM+
Sbjct: 424 ----PQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTC 479
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM-MGFFKNGRVVHGIVVKMGYDS 268
YAQ G+ A +F +M+ G+ + FT++ V+ A GR H I +K
Sbjct: 480 YAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHD 539
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V +AL+ MY + + A IFE ++D+ SWNS+++ + Q G L +F +M
Sbjct: 540 ALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQME 599
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ G + D VTF +V+ C+H + G++ + +A++ + + ++D+
Sbjct: 600 AEGIEMDGVTFLSVIMGCAHAGLVEEGQRY-----FDSMARDYGITPTMEHYA--CMVDL 652
Query: 389 YTKCGSMRDAQMVFTKMS 406
Y++ G + +A + MS
Sbjct: 653 YSRAGKLDEAMSLIEGMS 670
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 337/619 (54%), Gaps = 31/619 (5%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ N TF PF L C A L H G+ IH + + G+ T+L++MY
Sbjct: 121 VAPNNYTF--PFALKACSA---LADHHC----GRAIHRHAIHAGLQADLFVSTALLDMYV 171
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVL-PDKYT 136
KC + A +F + ++ +NAM++G+ + + M+ Q+ L P+ T
Sbjct: 172 KCACLPDAAHIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 230
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----------VYIGSALVNTYLKCQFME 186
L+ A+ + +H + L + V +G+AL++ Y KC +
Sbjct: 231 LVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 290
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSAL 245
A +VF+ +P R+ V W+A++ G+ +A +F+ M +G+ ++S ++ L A
Sbjct: 291 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 350
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + G +H ++ K G + + N+L+ MY K + +A+ +F+ M KD S++
Sbjct: 351 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 410
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++++ + Q G + +F +M + +PD T +++PACSHLAAL HGR HG +++
Sbjct: 411 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 470
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA S + NAL+DMY KCG + ++ VF M +D+ SWN MI GYG+ G
Sbjct: 471 GLASETS--------ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 522
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
GKEA +F M PD VTF+ +LSACSHSG + +G+ + +M YG+ P +EHY
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 582
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+L R G L+EAYE +MP A+ VW LL A R++ N DL + ++ + +L P
Sbjct: 583 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 642
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
GN+VL+SNIY A G+++E ++R + Q +K+PGCSWIE+ LH F+ D+SHP+
Sbjct: 643 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 702
Query: 606 AKSIYAELHSLTARLREHG 624
+ IY EL ++ +++ G
Sbjct: 703 SPEIYRELDNILVGIKKLG 721
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 214/452 (47%), Gaps = 35/452 (7%)
Query: 96 EPNVFTYNAMISGFYSND--FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+V TYN +I + S+ A GL + M + V P+ YTFP +K C +
Sbjct: 85 SPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCG 144
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH GL D+++ +AL++ Y+KC + +A +F +P RD+V WNAM+ GYA
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 214 GEFHKALEVFRRMSKEGIWMSRF-----TVTGVLSALIMMGFFKNGRVVHGIVV------ 262
G +H A+ M + M R T+ +L L G G VH +
Sbjct: 205 GMYHHAVAHLLSMQMQ---MHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHP 261
Query: 263 ----KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
K GV + AL+DMY K + A +F+ M ++ +W++++ C
Sbjct: 262 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMT 321
Query: 319 GTLRLFDRMLSAG---FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
LF ML+ G P + ++ L AC+ L L G Q+H LAK+G D
Sbjct: 322 QAFLLFKAMLAQGLCFLSP--TSIASALRACASLDHLRMGEQLHAL-----LAKSGVHAD 374
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ N+L+ MY K G + A +F +M+ KD S++ ++ GY +G+ +EA +F
Sbjct: 375 LT---AGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M ++PD T V ++ ACSH L GR + R G+ +IDM + G
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR-GLASETSICNALIDMYAKCG 490
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+++ + ++ MP+ + V W T++A +HG
Sbjct: 491 RIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG 521
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 152/328 (46%), Gaps = 12/328 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA--LEVFRRMSKEGIWMSRFTVTGVL 242
+ A +F+++P DV +N ++ Y+ A L ++RRM + + + +T L
Sbjct: 73 LSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFAL 132
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A + GR +H + G + + V AL+DMY K C+ +A IF M +D+
Sbjct: 133 KACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLV 192
Query: 303 SWNSIMTVHEQCG--NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+WN+++ + G +H L +M +P+ T +LP + AL G +H
Sbjct: 193 AWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHA 252
Query: 361 YIVVNGLA--KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
Y + L +N K D V + AL+DMY KCGS+ A+ VF M ++ +W+ +I
Sbjct: 253 YCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIG 312
Query: 419 GYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
G+ + + +A +F M L P + L AC+ L G + L+ ++
Sbjct: 313 GFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHLRMGEQLHALL-AKS 369
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
GV + ++ M +AG +++A L
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIAL 397
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/619 (32%), Positives = 337/619 (54%), Gaps = 31/619 (5%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ N TF PF L C A L H G+ IH + + G+ T+L++MY
Sbjct: 6 VAPNNYTF--PFALKACSA---LADHHC----GRAIHRHAIHAGLQADLFVSTALLDMYV 56
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVL-PDKYT 136
KC + A +F + ++ +NAM++G+ + + M+ Q+ L P+ T
Sbjct: 57 KCACLPDAAHIFATMPAR-DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNAST 115
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----------VYIGSALVNTYLKCQFME 186
L+ A+ + +H + L + V +G+AL++ Y KC +
Sbjct: 116 LVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLL 175
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSAL 245
A +VF+ +P R+ V W+A++ G+ +A +F+ M +G+ ++S ++ L A
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRAC 235
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + G +H ++ K G + + N+L+ MY K + +A+ +F+ M KD S++
Sbjct: 236 ASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYS 295
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++++ + Q G + +F +M + +PD T +++PACSHLAAL HGR HG +++
Sbjct: 296 ALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIR 355
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA S + NAL+DMY KCG + ++ VF M +D+ SWN MI GYG+ G
Sbjct: 356 GLASETS--------ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGL 407
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
GKEA +F M PD VTF+ +LSACSHSG + +G+ + +M YG+ P +EHY
Sbjct: 408 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYI 467
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+L R G L+EAYE +MP A+ VW LL A R++ N DL + ++ + +L P
Sbjct: 468 CMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPE 527
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
GN+VL+SNIY A G+++E ++R + Q +K+PGCSWIE+ LH F+ D+SHP+
Sbjct: 528 GTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQ 587
Query: 606 AKSIYAELHSLTARLREHG 624
+ IY EL ++ +++ G
Sbjct: 588 SPEIYRELDNILVGIKKLG 606
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 10/285 (3%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + + + +T L A + GR +H + G + + V AL+DMY K C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCG--NHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ +A IF M +D+ +WN+++ + G +H L +M +P+ T +L
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 344 PACSHLAALMHGRQIHGYIVVNGLA--KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
P + AL G +H Y + L +N K D V + AL+DMY KCGS+ A+ V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSACSHS 458
F M ++ +W+ +I G+ + + +A +F M L P + L AC+
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
L G + L+ ++ GV + ++ M +AG +++A L
Sbjct: 239 DHLRMGEQLHALL-AKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/537 (36%), Positives = 311/537 (57%), Gaps = 31/537 (5%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ L C+ +V ++N+MISG+ SN +GL + M LG+ D T ++ C
Sbjct: 69 LFDKL-CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSG 127
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K +H L K + + + L++ Y KC ++ AL+VFE++ R+VV W +M+
Sbjct: 128 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 187
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY + G A+ + ++M KEG+ + +T +L A G NG+ VH + S
Sbjct: 188 GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 247
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V NAL+DMY K + A +F M KDI SWN+++ G L+
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV----------GELK------ 291
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
PD T + +LPAC+ L+AL G++IHGYI+ NG + D + NAL+D+
Sbjct: 292 -----PDSRTMACILPACASLSALERGKEIHGYILRNGYS--------SDRHVANALVDL 338
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + A+++F + KD+ SW +MI GYGM G G EA+ F+ M +A ++PDEV+F
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ +L ACSHSG L QG F +M++ + + P +EHY C++D+L R G L++AY+ +P
Sbjct: 399 ISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP 458
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ +W LL R++ + +LAE A+RVF+LEP + G YVL++NIY K+EEV
Sbjct: 459 IAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKR 518
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFIS-SDRSHPEAKSIYAELHSLTARLREHG 624
+R + ++ +RKNPGCSWIE+K ++ F+S ++ SHP +K I + L + +++E G
Sbjct: 519 MREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEG 575
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 186/390 (47%), Gaps = 32/390 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
LAT I+ L CA L G+ +HS +++ +L++MYSKC + AL VF
Sbjct: 113 LATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFE 172
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV ++ +MI+G+ + ++ + M + GV D ++ C ++
Sbjct: 173 KMG-ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLD 231
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K +H + + ++++ +AL++ Y KC ME A VF + ++D++ WN MV
Sbjct: 232 NGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---- 287
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
GE SR T+ +L A + + G+ +HG +++ GY S
Sbjct: 288 --GELKPD--------------SR-TMACILPACASLSALERGKEIHGYILRNGYSSDRH 330
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL+D+Y K +G A +F+M+ KD+ SW ++ + G + + F+ M AG
Sbjct: 331 VANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG 390
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM-DMYT 390
+PD V+F ++L ACSH L G + YI+ N +I+ + A M D+ +
Sbjct: 391 IEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDF-------NIEPKLEHYACMVDLLS 442
Query: 391 KCGSMRDA-QMVFTKMSKKDVASWNIMILG 419
+ G++ A + + T D W ++ G
Sbjct: 443 RTGNLSKAYKFIETLPIAPDATIWGALLCG 472
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/607 (34%), Positives = 330/607 (54%), Gaps = 13/607 (2%)
Query: 33 ATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT + SL +CA + G IHS LR+ + S I +L+NMYS ++ A F+F
Sbjct: 548 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 607
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+S ++ ++N MIS + N + L + P+ TF + C A++
Sbjct: 608 NMS-RRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K +H +V +L L ++ +G++L+ Y KC ME+A KVF+ +P D+V +N ++ GYA
Sbjct: 667 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGV 270
+ + KA++VF M GI + T+ + + N GR +H +++ G+ S
Sbjct: 727 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 786
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY K + + IF + K+I SWN+I+ + Q G+ + L+LF M A
Sbjct: 787 YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHA 846
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + D V + L +C+ LA+L G Q+HG + +GL D ++ NA MDMY
Sbjct: 847 GNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDS--------DSYVVNAAMDMYG 898
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M + V + + WN +I GY G KEA + F M KPD VTFV
Sbjct: 899 KCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVA 958
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACSH+G + +G ++ M S +GV P I+H C++D+LGR G+ EA + MP
Sbjct: 959 LLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVL 1018
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N ++WR+LL++SR H N ++ A+++ +L+P YVL+SN+Y ++ +V +R
Sbjct: 1019 PNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLR 1078
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC--A 628
M+ N+ K P CSW++LK+ + TF DR H A+ IYA+L + +LRE G +
Sbjct: 1079 SHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTS 1138
Query: 629 GTLFDSD 635
L D+D
Sbjct: 1139 SALHDTD 1145
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/494 (25%), Positives = 237/494 (47%), Gaps = 10/494 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ + + + + G IH+ R G++ + T+L+++Y + A +
Sbjct: 344 FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRL 403
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E NV ++ A++ SN + + L + MR+ GV + F ++ C +
Sbjct: 404 FWEMP-ERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLEN 462
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ ++ V GL V + ++L+ + + +A K+F+ + D + WNAM++
Sbjct: 463 EVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISM 522
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+ G K VF M G+ T+ ++S F +G +H + ++ DS
Sbjct: 523 YSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS 582
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V+NAL++MY + +A +F M +D+ SWN++++ + Q N L+ ++
Sbjct: 583 VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFH 642
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ +TFS+ L ACS AL+ G+ +H ++ L +N + + N+L+ MY
Sbjct: 643 TNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRN--------LLVGNSLITMY 694
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC SM DA+ VF M D+ S+N++I GY + G +A+ +FS M A +KP+ +T +
Sbjct: 695 GKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMI 754
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ + + S L L R G + +I M + G L + + ++ N
Sbjct: 755 NIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITN 814
Query: 510 EANPVVWRTLLAAS 523
+ N V W ++AA+
Sbjct: 815 K-NIVSWNAIIAAN 827
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 16/373 (4%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQ---FMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
IHGL +L L L + + L+ Y + + AL +F+E+ R W V+G +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN---GRVVHGIVVKMGYDSG 269
G KA E+ R M + G+ +S F + +++A G + G +H + + G
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + AL+ +YG V +A +F M E+++ SW ++M G + LR + +M
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G + F+TV+ C L + G Q+ ++V+GL + V + N+L+ M+
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ--------NQVSVANSLITMF 492
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
G + DA+ +F +M + D SWN MI Y G + +FS M L+PD T
Sbjct: 493 GNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 552
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
++S C+ S S G L R + ++ +++M AG+L++A L M +
Sbjct: 553 SLMSVCASSDHFSHGSGIHSLCL-RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNM-S 610
Query: 510 EANPVVWRTLLAA 522
+ + W T++++
Sbjct: 611 RRDLISWNTMISS 623
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQ---FMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
IHGL +L L L + + L+ Y + + AL +F+E+ R W V+G +
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN---GRVVHGIVVKMGYDSG 269
G A E+ R M + G+ +S F + +++A G + G +H + + G
Sbjct: 98 CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157
Query: 270 VPVMNALIDM 279
V + AL+ +
Sbjct: 158 VYIGRALLHL 167
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/586 (35%), Positives = 338/586 (57%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + GQ IH+ +++ G++ + +SL+ MY+KC + + A+ +F+ + + +
Sbjct: 113 LKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMP-DKD 171
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +N +IS +Y + + L +F MR+ G PD T I C ++ + ++IH
Sbjct: 172 VACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHK 231
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G +D ++ +ALV+ Y KC +E A++VFE++P + VV WN+M+NGY G+
Sbjct: 232 ELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGIS 291
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+++F+RM EG+ + T+T L A G+ VHG +++ + + ++L+D
Sbjct: 292 CIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMD 351
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K V A IF++M + SWN +++ + G LRLF M + +PD +T
Sbjct: 352 LYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAIT 411
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F++VL ACS LAAL GR+IH IV L N +V M AL+DMY KCG++ +A
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNN-------EVVMG-ALLDMYAKCGAVEEA 463
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF + ++D+ SW MI YG G+ EAL++F+ M ++ +KPD VTF+ +LSACSH+
Sbjct: 464 FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWR 517
G + G M + YG++P IEHY+C+I +LGRAG+L+EAYE+ + P ++ +
Sbjct: 524 GLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLS 583
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TL +A RLH N DL A+ + +P Y+++SN+Y + GK++EV +R M+
Sbjct: 584 TLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLG 643
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++KNPGCSWIE+ + + F D SH + I L LT+ + +
Sbjct: 644 LKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/496 (32%), Positives = 267/496 (53%), Gaps = 13/496 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
I L+ + +L++G+ +H ++ G+ + +LI++Y C YA VF+ +
Sbjct: 7 IPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIEN 66
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVK 154
+ N +++G+ N + L F+ + L PD YT+P ++K C + V+ +
Sbjct: 67 PFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQ 126
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
IH + K GL +D+ +GS+LV Y KC E A+K+F+E+P +DV WN +++ Y Q G
Sbjct: 127 MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+F +AL F M + G T+T +S+ + GR +H +V G+ V
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSA 246
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
AL+DMYGK + A+E+FE M K + +WNS++ + G+ ++LF RM S G +P
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKP 306
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
L T ++ L ACS A L+ G+ +HGYI+ N + D+F+N++LMD+Y KCG
Sbjct: 307 TLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP--------DIFLNSSLMDLYFKCGK 358
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F M K SWN+MI GY +G+ +AL +F M ++ ++PD +TF VL+A
Sbjct: 359 VESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAA 418
Query: 455 CSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
CS L +GRE L+ E G + ++DM + G + EA+ + +P E +
Sbjct: 419 CSQLAALEKGREIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAFGVFKCLP-ERDL 475
Query: 514 VVWRTLLAASRLHGNT 529
V W +++ A HG
Sbjct: 476 VSWTSMITAYGSHGRV 491
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 167/320 (52%), Gaps = 8/320 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T I+S CA +L +G+EIH ++ +G +L++MY KC Q++ A+ VF
Sbjct: 209 TITTAISS---CARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVF 265
Query: 91 NNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+ PN V +N+MI+G+ + F M GV P T + C
Sbjct: 266 EQM---PNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSA 322
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+LE K +HG + + + D+++ S+L++ Y KC +E A +F+ +P V WN M++
Sbjct: 323 QLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMIS 382
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY G+ AL +F MSK + T T VL+A + + GR +H ++V+ +
Sbjct: 383 GYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGN 442
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
VM AL+DMY K V EA +F+ + E+D+ SW S++T + G L LF ML
Sbjct: 443 NEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEML 502
Query: 329 SAGFQPDLVTFSTVLPACSH 348
+ +PD VTF +L ACSH
Sbjct: 503 QSNVKPDRVTFLAILSACSH 522
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 317/588 (53%), Gaps = 45/588 (7%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VL 131
I +YS ++ A +F+ + +P++ T+ +IS + + + + ++N R V
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIP-QPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PDK + K C + V+ K++H + G DV +G+AL++ Y KC+ E A V
Sbjct: 76 PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
FE +P RDV+ W +M + Y G +AL FR+M G + TV+ +L A +
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
K+GR VHG VV+ G V V +AL++MY + +A +F+ M +D SWN ++T +
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255
Query: 312 ---EQC--------------------------------GNHDGTLRLFDRMLSAGFQPDL 336
++C G + L + RM ++GF+P+
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T ++VLPAC++L +L G+QIHGYI + D+ AL+ MY KCG +
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRHWF--------FQDLTTTTALVFMYAKCGDLE 367
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
++ VF+ M+K+D SWN MI+ M G G+EAL +F M ++ ++P+ VTF GVLS CS
Sbjct: 368 LSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS 427
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HS + +G M + V P +H++C++D+L RAG+L EAYE MP E W
Sbjct: 428 HSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAW 487
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL R++ N +L IAA R+F++E + GNYVL+SNI V+ + E + R MR +
Sbjct: 488 GALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDR 547
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V KNPGCSWI++++ +HTF+ D+S+ ++ IY L + ++R G
Sbjct: 548 GVTKNPGCSWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAG 595
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 189/417 (45%), Gaps = 46/417 (11%)
Query: 40 QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV 99
+ CA ++ + +H +R G L +LI+MY KC + A VF + +V
Sbjct: 86 KACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFR-DV 144
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
++ +M S + + + L F M G P+ T ++ C D+ + +++HG
Sbjct: 145 ISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGF 204
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY--------- 210
V + G+ +V++ SALVN Y C + +A VF+ + RD V WN ++ Y
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264
Query: 211 --------------------------AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
Q G KALEV RM G ++ T+T VL A
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ + G+ +HG + + + + AL+ MY K + + +F MM ++D SW
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI-HGYIV 363
N+++ GN + L LF M+ +G +P+ VTF+ VL CS H R + G ++
Sbjct: 385 NTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCS------HSRLVDEGLLI 438
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA-SWNIMILG 419
+ ++++ S + D ++ ++D+ ++ G + +A KM + A +W ++ G
Sbjct: 439 FDSMSRDHSVE--PDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L+ G+E+H +++R G+ + ++L+NMY+ C ++ A VF+++
Sbjct: 181 TVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSM 240
Query: 94 S-------------------CEP---------------NVFTYNAMISGFYSNDFAFKGL 119
S CE N ++NA+I G N K L
Sbjct: 241 SRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKAL 300
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
+ + M+ G P++ T ++ C ++ ++ K+IHG +F+ D+ +ALV Y
Sbjct: 301 EVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMY 360
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
KC +E + +VF + RD V WN M+ + G +AL +FR M G+ + T T
Sbjct: 361 AKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFT 420
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV----MNALIDMYGKGKCVGEALEIFEM 295
GVLS G + I M D V + ++D+ + + EA E +
Sbjct: 421 GVLSGCSHSRLVDEGLL---IFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKK 477
Query: 296 ME-EKDIFSWNSIM 308
M E +W +++
Sbjct: 478 MPIEPTAGAWGALL 491
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/599 (34%), Positives = 337/599 (56%), Gaps = 23/599 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS--KCCQMKY 85
PF LQ C + ++ ++H+ ++T ++ P + L+ +Y+ + ++Y
Sbjct: 11 QPFLPPNLHFPLQNCGTE---REANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQY 67
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A +F+ + EP + ++N +I + N + + F + +PD +T PC++K C
Sbjct: 68 AHSLFDWIQ-EPTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCA 125
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ A+ E K+IHGLV K+G +D ++ S+LV+ Y KC +E KVF+ + +DVV WN+
Sbjct: 126 RLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNS 185
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++GYA+ GE ALE+F M ++ F+ T ++ L G + R V +M
Sbjct: 186 LIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSGKLEAARDVFD---RMP 238
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ V NA+I+ Y K A E+F+ M E+ + +WNS++T +E+ L+LF+
Sbjct: 239 IRNSVS-WNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFE 297
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
ML P+ T + A S + +L GR +H YIV +G +G + L
Sbjct: 298 VMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDG--------VLGTLL 349
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
++MY+KCGS++ A VF + KK + W +I+G GM G ++ L++F MC LKP
Sbjct: 350 IEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHA 409
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TF+GVL+ACSH+GF + +M YG+ P+IEHY C+ID+L RAG L EA +
Sbjct: 410 ITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIE 469
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP +AN V+W +LL+ SR HGN + E AAQ + L P G YV++SN+Y A G +E+
Sbjct: 470 RMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEK 529
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V +R M+++ ++K+PGCS IE + +H FI D+SHP+ + IY +L + +L G
Sbjct: 530 VRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAG 588
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/601 (34%), Positives = 346/601 (57%), Gaps = 26/601 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT + +L A ++ ++ G ++H+ +++ G + +LI MY K + A V
Sbjct: 206 FTFATVLGAL---ADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ +V T+N MI G+ + F +G F+ MR GV + F +K C
Sbjct: 263 FDSMVVRDSV-TWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRE 321
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVN 208
+ K++H V K G + I +AL+ TY KC ++EA K+F +VV W AM+
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIG 381
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL----SALIMMGFFKNGRVVHGIVVKM 264
G+ Q KA+++F +MS+EG+ + FT + VL S+L+ +H ++K
Sbjct: 382 GFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQ--------LHAQIIKA 433
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y+ V AL+D Y K V E+ +F + KDI +W++++T Q + + + +F
Sbjct: 434 YYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVF 493
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+++ G +P+ TFS+V+ ACS AA + HG+QIH V +G N C +++
Sbjct: 494 IQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSG-KSNALC-------VSS 545
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY+K G++ A+ VFT+ ++D+ SWN MI GYG G K+AL++F M L
Sbjct: 546 ALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPL 605
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+VTF+GVL+AC+H+G + +G ++ +M Y + EHY+C++D+ RAG ++A ++
Sbjct: 606 DDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDI 665
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A+P +WRTLLAA R+H N +L ++AA+++ L+P YVL+SNI+ G +
Sbjct: 666 INGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNW 725
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
EE +R M ++ V+K GCSWIE+K+ + +F++ D SHP + +YA+L L+ +L++
Sbjct: 726 EEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDM 785
Query: 624 G 624
G
Sbjct: 786 G 786
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 246/511 (48%), Gaps = 21/511 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L++C + G+++H L++G ++ TSL++MY K + +F+ +
Sbjct: 106 TLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEM 165
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NV ++ +++SG+ N + + N M+ GV P+ +TF ++ D +
Sbjct: 166 GIK-NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGG 224
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H ++ K G + ++ +AL+ YLK + + +A VF+ + +RD V WN M+ GYA I
Sbjct: 225 VQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI 284
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + + ++F RM G+ +SR L + +H VVK GY+ +
Sbjct: 285 GFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIR 344
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ Y K V EA ++F M + ++ +W +++ Q N+ + LF +M G
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGV 404
Query: 333 QPDLVTFSTVLPA-CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ T+STVL S L + +H + I Y + + V AL+D Y K
Sbjct: 405 RPNHFTYSTVLAGKPSSLLSQLHAQIIKAYY-----------EKVPSV--ATALLDAYVK 451
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G++ ++ VF + KD+ +W+ M+ G ++A+++F + + +KP+E TF V
Sbjct: 452 TGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSV 511
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
++ACS S + + + + G + + ++ M + G + E+ E E
Sbjct: 512 INACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNI-ESAEKVFTRQEER 570
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ V W +++ HG+ A VFQ+
Sbjct: 571 DIVSWNSMITGYGQHGDAK----KALEVFQI 597
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 222/440 (50%), Gaps = 16/440 (3%)
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+YA +F+ + ++ YN ++ F N+ + L F + G+ D T C +K
Sbjct: 55 RYAHQLFDETPLK-DISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKV 113
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + +++H K G DV +G++LV+ Y+K + E+ +F+E+ +++VV W
Sbjct: 114 CGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSW 173
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
++++GYA+ G + + + +M EG+ + FT VL AL + G VH ++VK
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G++ V NALI MY K + VG+A +F+ M +D +WN ++ + G + ++
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F RM AG + F T L CS L +Q+H +V NG +DI
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE---FAQDI-----RT 345
Query: 384 ALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
ALM Y+KC S+ +A +F+ + +V +W MI G+ + K+A+D+F M ++
Sbjct: 346 ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVR 405
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+ T+ VL A S LSQ ++++ Y VP++ T ++D + G + E+
Sbjct: 406 PNHFTYSTVL-AGKPSSLLSQLHA--QIIKAYYEKVPSVA--TALLDAYVKTGNVVESAR 460
Query: 503 LALAMPNEANPVVWRTLLAA 522
+ ++P + + V W +L
Sbjct: 461 VFYSIPAK-DIVAWSAMLTG 479
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 344/625 (55%), Gaps = 51/625 (8%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC-----QMKYALFVF 90
I+ L+ C L+ +IHS+ ++ G+ PL +I CC +M YA VF
Sbjct: 11 ISLLEKCKSMYQLK---QIHSHTIKMGLSSDPLFQKRVIAF---CCAHESGKMIYARQVF 64
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +P +F +N MI G+ + G+ + M + PD++TFP L+K MA+
Sbjct: 65 DAIP-QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMAL 123
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K + K G D ++++ A ++ + C+ ++ A KVF+ +VV WN M++GY
Sbjct: 124 QYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGY 183
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++ +F K+ +F M K G+ + T+ +LSA + + G+ ++ + + +
Sbjct: 184 NRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNL 243
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD------------ 318
+ N LIDM+ + EA +F+ M+ +D+ SW SI+T G D
Sbjct: 244 ILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPER 303
Query: 319 ----------GTLR---------LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
G LR LF M + +PD T ++L AC+HL AL G +
Sbjct: 304 DYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVK 363
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
YI N + +D F+ NAL+DMY KCG++ A+ VF +M KD +W MI+G
Sbjct: 364 TYIDKNSIK--------NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVG 415
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
++G G+EAL MFS M EA + PDE+T++GVL AC+H+G + +G+ F M ++G+ P
Sbjct: 416 LAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKP 475
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
+ HY C++D+LGRAG+L EA+E+ + MP + N +VW +LL A R+H N LAE+AA+++
Sbjct: 476 NVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQI 535
Query: 540 FQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS 599
+LEP + YVL+ NIY A ++E + +R M ++ ++K PGCS +EL ++ F++
Sbjct: 536 LELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAG 595
Query: 600 DRSHPEAKSIYAELHSLTARLREHG 624
D+SHP++K IYA+L ++ L + G
Sbjct: 596 DQSHPQSKEIYAKLENMMQDLIKAG 620
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 88/177 (49%), Gaps = 5/177 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CAH L+ G+ + +Y+ + I + +LI+MY KC + A VF +
Sbjct: 342 TMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ FT+ AMI G N + L F++M + + PD+ T+ ++ C C ++E
Sbjct: 402 H-HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVL-CACTHAGMVEK 459
Query: 154 KK--IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ + + G+ +V +V+ + +EEA +V +P++ + ++W +++
Sbjct: 460 GQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL 516
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/583 (35%), Positives = 336/583 (57%), Gaps = 18/583 (3%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KG+E+H++++RTG+ D+ ++I L+NMY+K + A VF L E + ++N++IS
Sbjct: 403 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLIS 461
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N+ + + F+ MR+ G +P +T + C + ++ ++IH KLGLD
Sbjct: 462 GLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDT 521
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEVFRRM 226
DV + +AL+ Y + E LKVF +P D V WN+++ + +A++ F +M
Sbjct: 522 DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQM 581
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +SR T +LSA+ + + +H +V+K + NAL+ YGK +
Sbjct: 582 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 641
Query: 287 GEALEIFEMMEE-KDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
E +IF M E +D SWNS+++ +H + + L F M+ G + D TF+T+L
Sbjct: 642 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF--MMQKGQRLDSFTFATIL 699
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ +A L G ++H + L DV + +AL+DMY+KCG + A F
Sbjct: 700 SACASVATLERGMEVHACGIRACLES--------DVVVGSALVDMYSKCGRIDYASRFFE 751
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
M ++V SWN MI GY G G++AL +F+ M PD VTFVGVLSACSH GF+ +
Sbjct: 752 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEE 811
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA- 522
G E M Y + P +EH++C++D+LGRAG+L+E + +MP + N ++WRT+L A
Sbjct: 812 GFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGAC 871
Query: 523 SRLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
R +G NT+L AA+ + +LEP + NYVL++N+Y +G K+E+V R M++ V+K
Sbjct: 872 CRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKE 931
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
GCSW+ +KDG+H F++ D+ HPE IY +L L ++R+ G
Sbjct: 932 AGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAG 974
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 174/325 (53%), Gaps = 5/325 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I++L CA + G++IH L+ G +D+ +S++ +L+ +Y++ L VF +
Sbjct: 490 TLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYAETGCFTECLKVF-S 547
Query: 93 LSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
L E + ++N++I ++ + + + +F M + G + TF ++ +
Sbjct: 548 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHE 607
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGY 210
+IH LV K L D IG+AL++ Y KC M E K+F + RD V WN+M++GY
Sbjct: 608 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 667
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
HKA+++ M ++G + FT +LSA + + G VH ++ +S V
Sbjct: 668 IHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDV 727
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +AL+DMY K + A FE+M ++++SWNS+++ + + G+ + L+LF RM+
Sbjct: 728 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 787
Query: 331 GFQPDLVTFSTVLPACSHLAALMHG 355
G PD VTF VL ACSH+ + G
Sbjct: 788 GQPPDHVTFVGVLSACSHVGFVEEG 812
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 224/492 (45%), Gaps = 34/492 (6%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
++ +E+H ++ G + + +LIN+Y + + A +F+ +S N+ T+ +ISG
Sbjct: 88 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMS-NRNLVTWACLISG 146
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV---LEVKKIHGLVFKLGL 165
+ N + F M + G +P+ Y F ++ C + L V +IHGL+ K
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGV-QIHGLISKTRY 205
Query: 166 DLDVYIGSALVNTYLKC-QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DV + + L++ Y C +A VF+ + +R+ + WN++++ Y++ G+ A ++F
Sbjct: 206 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 265
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV---------KMGYDSGVPVMNA 275
M KEG+ S +LI V G+ V K G+ + V +A
Sbjct: 266 SMQKEGLGFSFKPNEYTFGSLITTAC---SSVDFGLCVLEQMLARVEKSGFLQDLYVSSA 322
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQP 334
L+ + + +A IFE M +++ S N +M + + ++F M G
Sbjct: 323 LVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINS 382
Query: 335 DLVTFSTVLPACSHLAAL----MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
D ++ +L A S + L GR++H +++ GL N V + N L++MY
Sbjct: 383 D--SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDN-------KVAIGNGLVNMYA 433
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K G++ DA VF M +KD SWN +I G + ++A + F M P T +
Sbjct: 434 KSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
LS+C+ G++ G E + + G+ + ++ + G E ++ MP E
Sbjct: 494 TLSSCASLGWIMLG-EQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-E 551
Query: 511 ANPVVWRTLLAA 522
+ V W +++ A
Sbjct: 552 YDQVSWNSVIGA 563
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 196/410 (47%), Gaps = 43/410 (10%)
Query: 136 TFPCLIK-----CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
TF LI CC + E +++H K G ++++ + L+N Y++ + A K
Sbjct: 73 TFESLINRYQGSCCSE-----EARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQK 127
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F+E+ R++V W +++GY Q G+ +A FR M + G + + L A G
Sbjct: 128 LFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 187
Query: 251 F--KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG-KCVGEALEIFEMMEEKDIFSWNSI 307
K G +HG++ K Y S V V N LI MYG +A +F+ + ++ SWNSI
Sbjct: 188 SGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSI 247
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAG----FQPDLVTF-STVLPACSHLAALMHGRQIHGYI 362
++V+ + G+ LF M G F+P+ TF S + ACS + G
Sbjct: 248 ISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVD--------FGLC 299
Query: 363 VVNG-LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
V+ LA+ + D+++++AL+ + + G DA+ +F +M ++V S N +++G
Sbjct: 300 VLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLV 359
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT- 480
QG+ A +F M + + + ++V +LSA S L +GR E V+ T
Sbjct: 360 KQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFSVLEEGRR--KGREVHAHVIRTG 416
Query: 481 -----IEHYTCVIDMLGRAGQLNEA---YELALAMPNEANPVVWRTLLAA 522
+ +++M ++G + +A +EL + E + V W +L++
Sbjct: 417 LNDNKVAIGNGLVNMYAKSGAIADACSVFELMV----EKDSVSWNSLISG 462
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT +++ CA L++G E+H+ +R + + ++L++MYSKC ++ YA
Sbjct: 693 FTFATILSA---CASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 749
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + NV+++N+MISG+ + K L F M G PD TF ++ C V
Sbjct: 750 FELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 808
Query: 150 V---LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
V E K V++L ++ + S +V+ + ++E +P++ +V++W
Sbjct: 809 VEEGFEHFKSMSEVYRLSPRVEHF--SCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 866
Query: 206 MV 207
++
Sbjct: 867 VL 868
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 331/579 (57%), Gaps = 12/579 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T L + H +++G S + ++I+ Y+KC +++ A +F S + + ++N M
Sbjct: 13 TALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETS-QRDAVSWNTM 71
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I+GF + L+F M++ G D Y+F ++K V V +++H ++ K+G
Sbjct: 72 IAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGY 131
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ +V+ GSAL++ Y KC+ +E+A +VF+ + +R+ V WNA+++GYAQ+G+ A +
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M EG+ + T +L+ L K VH +VK G S V NA+I Y +
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251
Query: 286 VGEALEIFE-MMEEKDI--FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ +A +F+ +E +D+ SWNSI+T Q G + L+ F+ M S D FS V
Sbjct: 252 IEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAV 311
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L +CS LA L G+Q+H ++ +G NG F+ ++L+ MY+KCG + DA+ F
Sbjct: 312 LRSCSDLATLQLGQQVHVLVLKSGFEPNG--------FVASSLIFMYSKCGVIEDARKSF 363
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
K +WN +I GY G+GK ALD+F M + ++K D +TFV VL+ACSH G +
Sbjct: 364 DATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVE 423
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G FL MES YG+ P +EHY C+ID+LGRAG+L+EA L AMP E + +VW+TLL A
Sbjct: 424 EGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 483
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R G+ +LA A + +LEP YVL+S+++ ++ E I+ M+++ V+K P
Sbjct: 484 CRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVP 543
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
G SWIE+K+ + +F + DRSHP + IY L L +R
Sbjct: 544 GWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIR 582
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ LQ GQ++H +L++G + +SLI MYSKC ++ A F+ +
Sbjct: 310 AVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKD 369
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
++ +N++I G+ + LD F M+ V D TF ++ C + V E
Sbjct: 370 SSI-AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEE---- 424
Query: 157 HGLVFKLGLDLDVYIG------SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
G F ++ D I + +++ + ++EA + E +P D ++W ++
Sbjct: 425 -GWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 483
Query: 210 YAQIGEFHKALEV 222
G+ A +V
Sbjct: 484 CRTCGDIELASQV 496
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 331/611 (54%), Gaps = 43/611 (7%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +G+++H+ ++ G P+ + L+ Y+ + A + N S + +N +I
Sbjct: 108 SLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITEN-SNILHPLPWNLLI 166
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + N + L + M G+ PDK+T+P ++K C + + + KK+H + L
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
++++ ++LV+ Y K + A +FE + RD V WN M++GYA G + +A E+F +M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 227 SKEGIWMSRFTVTGV-----------------------------------LSALIMMGFF 251
EGI ++ T + L A +G
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAI 346
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
K GR +HG ++ YD V NALI MY + K + A +F+ K+I +WNS+++ +
Sbjct: 347 KLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGY 406
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ LF ML +G +P+ VT +++LP C+ +A L HG++ H YI+ K
Sbjct: 407 THMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFK-- 464
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
D + + N+L+DMY + G + +A+ +F +S++D ++ +I GYG+ G+G+EAL
Sbjct: 465 -----DYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALK 519
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M + +KPD VT V VLSACSHSG +++G + LM S YG++P +EH+ C++D+
Sbjct: 520 LFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLF 579
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG L++A E+ MP + +W TLL A R+HGN ++ E AA+++ ++ P + G YV
Sbjct: 580 GRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYV 639
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L++N+Y A G + ++ +R MR VRK PGC+W+++ G F+ D S P +Y
Sbjct: 640 LIANMYAAAGCWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYP 699
Query: 612 ELHSLTARLRE 622
L LT +++
Sbjct: 700 LLEGLTELMKD 710
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L LCA NLQ G+E H Y+L R G D L SL++MY++ ++ A +F++
Sbjct: 433 TIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDS 492
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S V TY ++I+G+ + L F+ M++ + PD T ++ C V E
Sbjct: 493 ISRRDEV-TYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTE 551
Query: 153 VKKIHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
K+ L+ G+ + + +V+ + + + +A ++ +P R +W +
Sbjct: 552 GIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGAC 611
Query: 207 -VNGYAQIGEF 216
++G A+IGE+
Sbjct: 612 RIHGNAEIGEW 622
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/586 (33%), Positives = 318/586 (54%), Gaps = 15/586 (2%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F+ SG++ +TL T L+ C + GQ +H +++ G+ + LI
Sbjct: 250 FDKLVESGDEI--SKYTLPTV---LKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLI 304
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MYSKC + A VF + EP+V + MIS F +D A + D F M +GV P++
Sbjct: 305 EMYSKCLSAEDAYEVFARID-EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQ 363
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
YTF L V + IH + K G + A+V Y+K +++A+ F+
Sbjct: 364 YTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDL 423
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ D+ WN +++G+ L +F+ + EG+ +++T G+L + + G
Sbjct: 424 MQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFG 483
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
VH V+K G+ V L+DMY + C A +F+ ++E+D+FSW +M+ + +
Sbjct: 484 CQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKT 543
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+ + F ML +P+ T +T L CS LA L G Q+H Y + +G N S
Sbjct: 544 DEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGW--NSS-- 599
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+++AL+DMY KCG++ DA+M+F + D+ WN +I GY G G +AL+ F
Sbjct: 600 -----VVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQ 654
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + PDE+TFVGVLSACSH+G L +GR + L+ S YG+ PT+EHY C++D+L +A
Sbjct: 655 EMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKA 714
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L EA L MP + +W+T+L A R+HGN ++AE AA+++F+ +P + +L+S
Sbjct: 715 GKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLS 774
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
NIY ++ +V +R + + V+K PGCSWIE+ LH F+S D
Sbjct: 775 NIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFLSQD 820
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 221/425 (52%), Gaps = 19/425 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+LQ CA L++G+ +H+ +LR+G SL+NMY KC ++ A VF+ +
Sbjct: 65 AALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMP-H 123
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V + AM+S + A L F M + GV+P+ + +K C + ++
Sbjct: 124 RDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQV 183
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H KL D Y+ S+LV Y+ C ++ A + + P+R V WNA++N YA+ G++
Sbjct: 184 HAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDY 243
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
K + VF ++ + G +S++T+ VL + +G K+G+ VHG+V+K G ++ + N L
Sbjct: 244 AKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCL 303
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD---RMLSAGFQ 333
I+MY K +A E+F ++E D+ + +++ ++ HD FD +M G +
Sbjct: 304 IEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDR---HDMAPEAFDIFMQMSDMGVK 360
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN-GSCKDIDDVFMNNALMDMYTKC 392
P+ TF + S + R IH +IV +G ++ G C +A++ MY K
Sbjct: 361 PNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVC---------DAIVGMYVKT 411
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVGV 451
G+++DA + F M D+ASWN ++ G+ + L +F +CE L ++ T+VG+
Sbjct: 412 GAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLA-NKYTYVGI 470
Query: 452 LSACS 456
L C+
Sbjct: 471 LRCCT 475
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 249/512 (48%), Gaps = 15/512 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F+ S + F LA A+L+ C ++L ++H+ ++ + P +SL+
Sbjct: 149 FAEMSEEGVVPNGFALA---AALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEA 205
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y C ++ A + +V ++NA+++ + + K + F+ + + G KYT
Sbjct: 206 YVSCGEVDVAERALLDSPVRSDV-SWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYT 264
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
P ++KCC ++ + +HGLV K GL+ D + + L+ Y KC E+A +VF +
Sbjct: 265 LPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARID 324
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
DVV + M++ + + +A ++F +MS G+ +++T G+ G R
Sbjct: 325 EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRS 384
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+H +VK G+ V +A++ MY K V +A+ F++M+ DI SWN++++ N
Sbjct: 385 IHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNN 444
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ LR+F ++ G + T+ +L C+ L L G Q+H ++ +G
Sbjct: 445 CEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQG------- 497
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D ++ L+DMY + G +A++VF ++ ++DV SW +++ Y +G++A++ F M
Sbjct: 498 -DYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSM 556
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+P++ T LS CS L G + L + G ++ + ++DM + G
Sbjct: 557 LRENKRPNDATLATSLSVCSDLACLGSGLQ-LHSYTIKSGWNSSVVS-SALVDMYVKCGN 614
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
L +A E+ + + V W T++ HG+
Sbjct: 615 LADA-EMLFDESDTHDLVEWNTIICGYAQHGH 645
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 183/389 (47%), Gaps = 16/389 (4%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
++ ++ C A+ K +H + + G D ++ +L+N Y KC + +A VF+ +
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM---MGFFK 252
P RDVV W AMV+ G+ AL +F MS+EG+ + F + L A + +GF
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
VH VK+ V ++L++ Y V A + SWN+++ +
Sbjct: 182 Q---VHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYA 238
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ G++ + +FD+++ +G + T TVL C L G+ +HG ++ GL
Sbjct: 239 RDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLET--- 295
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D +NN L++MY+KC S DA VF ++ + DV ++MI + EA D+
Sbjct: 296 -----DRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDI 350
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M + +KP++ TFVG+ S +G ++ R + + G T ++ M
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHI-VKSGFSRTKGVCDAIVGMYV 409
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ G + +A LA + + W TLL+
Sbjct: 410 KTGAVQDAI-LAFDLMQGPDIASWNTLLS 437
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 315/572 (55%), Gaps = 15/572 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQK-GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
+TL T + C + L K GQ +H+ +++ G+ + + L+ MYS+C + A
Sbjct: 253 YTLPTVLK----CCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYE 308
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + EP+V +AMIS F +D A++ LD F M +GV P+ Y F +
Sbjct: 309 VFIRID-EPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTG 367
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +H + K G + +G A++N Y+K +++A F+ + D WN +++
Sbjct: 368 DANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILS 427
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ + L +F++M+ EG +++T VL + + G VH ++K G +
Sbjct: 428 AFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQN 487
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V L+DMY + C A +FE ++E+D FSW IM+ + + + + F ML
Sbjct: 488 DTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSML 547
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P T + L CS +A+L G Q+H + + +G + ++ AL+DM
Sbjct: 548 RENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGW---------NSSVVSGALVDM 598
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG++ DA+M+F + +D +WN +I GY G G +ALD F M + +PD +TF
Sbjct: 599 YVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITF 658
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VGVLSACSH+G L++GR++ + S YG+ PT+EHY C++D+L +AG+L EA L MP
Sbjct: 659 VGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMP 718
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ +WRT+L A R+H N ++AE AA+R+F+LEP + +L+SNIY G++ +V
Sbjct: 719 LAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTR 778
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+R+ + V+K PGCSWIE+ +H F+S D
Sbjct: 779 VRNILLDHGVKKEPGCSWIEINGQIHMFLSQD 810
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 222/434 (51%), Gaps = 11/434 (2%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
T H L A+LQ CA + L++GQE+H+ +LR+ + + SL+NMY KC ++
Sbjct: 42 HTVAHAEELRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRL 101
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+ + ++ + AMIS + + + LD F M Q G+ P+ +T ++K
Sbjct: 102 VDARRVFDGMP-HRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKA 160
Query: 144 CCDVMAVLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C ++HG V KL GLD D Y+GS+LV Y C ++ A V LP R V
Sbjct: 161 CSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVS 219
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNA++NGYA+ G++ + + + ++ G +S++T+ VL + +G K G+ VH V+
Sbjct: 220 WNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVI 279
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
K G ++ + + L++MY + EA E+F ++E D+ +++++ ++ L
Sbjct: 280 KRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALD 339
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF +M G +P+ F + S R +H YIV +G A K + D
Sbjct: 340 LFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAM---LKGVGD---- 392
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
A+++MY K G+++DA + F + + D SWN ++ + ++ L +F M
Sbjct: 393 -AILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFS 451
Query: 443 PDEVTFVGVLSACS 456
++ T+V VL C+
Sbjct: 452 ANKYTYVSVLRCCT 465
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 243/499 (48%), Gaps = 15/499 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLA+ L+ C+ ++ + ++H +++ +D P +SL+ Y+ C ++ A V
Sbjct: 152 FTLASV---LKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETV 208
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
L +V ++NA+++G+ + + + + G KYT P ++KCC ++
Sbjct: 209 LLGLPERSDV-SWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGL 267
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +H V K GL+ D + S LV Y +C EEA +VF + DVV +AM++
Sbjct: 268 AKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISC 327
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ + +AL++F +MS G+ + + G+ G R VH +VK G+
Sbjct: 328 FDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAML 387
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +A+++MY K V +A F+++ E D FSWN+I++ N + LR+F +M
Sbjct: 388 KGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMAC 447
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
GF + T+ +VL C+ L L G Q+H I+ +GL +D ++ L+DMY
Sbjct: 448 EGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQ--------NDTDVSRMLVDMY 499
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+ G A +VF ++ ++D SW +++ GY + ++ ++ F M ++P + T
Sbjct: 500 AQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLA 559
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
LS CS L G + L + G ++ ++DM + G + +A E+
Sbjct: 560 VSLSVCSDMASLGSGLQ-LHSWAIKSGWNSSVVS-GALVDMYVKCGNIADA-EMLFHESE 616
Query: 510 EANPVVWRTLLAASRLHGN 528
+ V W T++ HG+
Sbjct: 617 TRDQVAWNTIICGYSQHGH 635
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 192/370 (51%), Gaps = 12/370 (3%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + + L D ++ +L+N Y KC + +A +VF+ +P RD+V W AM++ +
Sbjct: 70 QELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAA 129
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ +AL++F RM++EGI + FT+ VL A K VHG VVK+ V
Sbjct: 130 GDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVG 189
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
++L++ Y + A + + E+ SWN+++ + + G++ + + ++++++G +
Sbjct: 190 SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDE 249
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
T TVL C L +G+ +H ++ GL + D+V +N+ L++MY++C
Sbjct: 250 ISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGL-------ETDNV-LNSCLVEMYSRCL 301
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S +A VF ++ + DV + MI + EALD+F M +KP+ FVG+
Sbjct: 302 SAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAG 361
Query: 454 ACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S +G + R +++S + ++ + +++M + G + +A + + +E +
Sbjct: 362 VASRTGDANLCRSVHAYIVKSGFAMLKGVG--DAILNMYVKVGAVQDA-TVTFDLIHEPD 418
Query: 513 PVVWRTLLAA 522
W T+L+A
Sbjct: 419 TFSWNTILSA 428
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 11/254 (4%)
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G+ +H +++ ++++L++MY K + +A +F+ M +DI +W ++++
Sbjct: 66 LRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISA 125
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV-VNGLAK 369
H G+ D L +F RM G P+ T ++VL ACS + Q+HG +V +NGL
Sbjct: 126 HTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGL-- 183
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
DD ++ ++L++ YT CG + A+ V + ++ SWN ++ GY G +
Sbjct: 184 -------DDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ + + + + + T VL C G G+ + R G+ +C+++
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKR-GLETDNVLNSCLVE 295
Query: 490 MLGRAGQLNEAYEL 503
M R EAYE+
Sbjct: 296 MYSRCLSAEEAYEV 309
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 340/598 (56%), Gaps = 13/598 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T + ++Q CA +L+ G++IH ++ ++ + +L+NMYS ++ + +
Sbjct: 253 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 312
Query: 90 FNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F ++ PN +N+MIS + + + +D F M+ GV D+ T ++ C ++
Sbjct: 313 FESV---PNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEEL 369
Query: 148 MA-VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ +L+ K +H V K G+ +D +G+AL++ Y + +E K+F+ + D++ WN M
Sbjct: 370 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM 429
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ A+ +A E+F RM + I + +T+ +L+A + GR +HG V+K
Sbjct: 430 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI 489
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ P+ AL DMY A ++FE ++D+ SWN+++ + + L LF R
Sbjct: 490 EINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHR 549
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M+S +P+ VT VL + +HLA L G+ +H Y+ G + D+ + NA +
Sbjct: 550 MISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGL------DLSLANAFI 602
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY +CGS++ A+ +F + K+++ SWN MI GYGM+G+G +A+ FS M E +P+ V
Sbjct: 603 TMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGV 662
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TFV VLSACSHSGF+ G + M + V P + HY+C++D+L R G ++EA E +
Sbjct: 663 TFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDS 722
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP E + VWR LL++ R + + A+ +++ +LEP + GNYVL+SN+Y G + EV
Sbjct: 723 MPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEV 782
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR ++++ +RK PG SWI +K+ +H F + DRSHP++ IYA+L L + +RE G
Sbjct: 783 RRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETG 840
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 271/554 (48%), Gaps = 32/554 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS-PLSITSLINMYSKCCQMKYALFVFNN 92
T +A L C + L+ G+ +H Y LR G+ DS P T+LI Y + M+ +F +
Sbjct: 156 TMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLF-D 213
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL-----IKCCCDV 147
L N+ ++NAMISG+Y FK L+ F M L D+ F C+ ++ C ++
Sbjct: 214 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQM-----LVDEVKFDCVTMLVAVQACAEL 268
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
++ K+IH L K D+YI +AL+N Y +E + ++FE +P RD LWN+M+
Sbjct: 269 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 328
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL--IMMGFFKNGRVVHGIVVKMG 265
+ YA G +A+++F RM EG+ TV +LS + G K G+ +H V+K G
Sbjct: 329 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIKSG 387
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ NAL+ MY + CV +IF+ M+ DI SWN+++ + LF+
Sbjct: 388 MRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 447
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM + +P+ T ++L AC + L GR IHGY++ + + N + AL
Sbjct: 448 RMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP--------LRTAL 499
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
DMY CG A+ +F +D+ SWN MI Y + Q +AL +F M ++ +P+
Sbjct: 500 ADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNS 558
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VT + VLS+ +H L QG+ + R + + + I M R G L A +
Sbjct: 559 VTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIF 618
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GG 561
+P N + W ++A ++G A +A ++ LE G N V ++ A G
Sbjct: 619 KTLPKR-NIISWNAMIAGYGMNGRGSDAMLAFSQM--LEDGFRPNGVTFVSVLSACSHSG 675
Query: 562 KYEEVLDIRHTMRQ 575
E L + H+M Q
Sbjct: 676 FIEMGLQLFHSMVQ 689
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 247/486 (50%), Gaps = 14/486 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA Q +++G+ IH + T ++D T++++ Y KC ++ A VF+ +S + +
Sbjct: 60 LKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRD 118
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +NAM+ G+ + + M + + P+ T L+ C + + +HG
Sbjct: 119 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 178
Query: 159 LVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ G+ D + ++ +AL+ YL+ L +F+ + +R++V WNAM++GY +G++
Sbjct: 179 YCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDYF 237
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KALE+F +M + + T+ + A +G K G+ +H + +K + + ++NAL+
Sbjct: 238 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 297
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+MY + + ++FE + +D WNS+++ + G H+ + LF RM S G + D
Sbjct: 298 NMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER 357
Query: 338 TFSTVLPACSHLAA-LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +L C LA+ L+ G+ +H +++ +G+ + S + NAL+ MYT+ +
Sbjct: 358 TVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS--------LGNALLSMYTELNCVE 409
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
Q +F +M D+ SWN MIL + +A ++F M E+++KP+ T + +L+AC
Sbjct: 410 SVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACE 469
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L GR + ++ + T + DM G A +L P+ + + W
Sbjct: 470 DVTCLDFGRSIHGYV-MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR-DLISW 527
Query: 517 RTLLAA 522
++A+
Sbjct: 528 NAMIAS 533
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 187/353 (52%), Gaps = 14/353 (3%)
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
ND A L + M LGVLP+ T P ++K C AV K IH + L DV +
Sbjct: 33 NDQAI--LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRV 90
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G+A+V+ Y KC F+E+A VF+ + RDVVLWNAMV GY G + +A+ + R M +E +
Sbjct: 91 GTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENL 150
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEAL 290
+ T+ +L A + GR VHG ++ G +DS V ALI Y + L
Sbjct: 151 RPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL 210
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F++M ++I SWN++++ + G++ L LF +ML + D VT + AC+ L
Sbjct: 211 -LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELG 269
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L G+QIH + + ++D+++ NAL++MY+ GS+ + +F + +D
Sbjct: 270 SLKLGKQIHQLAI--------KFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 321
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH--SGFL 461
WN MI Y G +EA+D+F M +K DE T V +LS C SG L
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 374
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 155/329 (47%), Gaps = 10/329 (3%)
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++ ++D WN+++ A + L + +M G+ + T+ VL A +
Sbjct: 12 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H + V V A++D Y K V +A +F+ M ++D+ WN+++ +
Sbjct: 72 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ + L M +P+ T +L AC + L GR +HGY + NG+ +
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNP- 190
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ AL+ Y + MR ++F M +++ SWN MI GY G +AL++F
Sbjct: 191 ------HVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELF 243
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M ++K D VT + + AC+ G L G++ L ++ V + +++M
Sbjct: 244 VQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQL-AIKFEFVEDLYILNALLNMYSN 302
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAA 522
G L +++L ++PN P +W ++++A
Sbjct: 303 NGSLESSHQLFESVPNRDAP-LWNSMISA 330
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/612 (35%), Positives = 343/612 (56%), Gaps = 18/612 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS G + FT + +++ CA L+ G+++HS++++ + +L++M
Sbjct: 438 FSEMRGCGFWPDEFTYTSILSA---CACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDM 494
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y+KC ++ A F + NV ++NA+I G+ + + + F M G+ PD+ +
Sbjct: 495 YAKCGALEEARQQFEFIRNRDNV-SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVS 553
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
++ C ++ A+ + +++H + K GL +Y GS+L++ Y+KC +E A VF +P
Sbjct: 554 LASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
R VV NA++ GYAQ + +A+++F+ M EG+ S T +L A GR
Sbjct: 614 SRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQ 672
Query: 257 VHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQ 313
+H ++ K G YD ++ L+ MY + +A +F E K W +I++ H Q
Sbjct: 673 IHCLIQKRGLLYDGDFLGVSLLV-MYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQ 731
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G + L+L+ M +PD TF++VL ACS LA+L GR IH I GL
Sbjct: 732 NGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDS---- 787
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDM 432
D +A++DMY KCG M+ + VF +M SK DV SWN MI+G+ +G + AL +
Sbjct: 788 ----DELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKI 843
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M +++PD+VTF+GVL+ACSH+G +S+GRE +M Y +VP ++H C+ID+LG
Sbjct: 844 FDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLG 903
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
R G L EA E + E N ++W TLL A R+HG+ AA+++ +LEP + YVL
Sbjct: 904 RWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVL 963
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNIY A G ++EV +R MR++ +RK PGCSWI + + F++ D+ HP A I+A
Sbjct: 964 LSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHAL 1023
Query: 613 LHSLTARLREHG 624
L L A ++E G
Sbjct: 1024 LKDLIALMKEDG 1035
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 226/417 (54%), Gaps = 10/417 (2%)
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
M + G++ ++ ++I ++ A +F + NV +N MISG +
Sbjct: 274 MQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMP-NTNVVAWNVMISGHVKRGCDIE 332
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+DFF +M + GV + T ++ + A+ +H K GL+ +VY+GS+L+N
Sbjct: 333 AIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLIN 392
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y KC+ ME A KVF+ L R++VLWNAM+ GYAQ G K +++F M G W FT
Sbjct: 393 MYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFT 452
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
T +LSA + + GR +H ++K ++ + V N L+DMY K + EA + FE +
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIR 512
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+D SWN+I+ + Q + D +F RM+ G PD V+ +++L C++L AL G Q
Sbjct: 513 NRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQ 572
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H ++V +GL +C ++ ++L+DMY KCG++ A+ VF+ M + V S N +I
Sbjct: 573 VHCFLVKSGLQ---TC-----LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAII 624
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
GY + EA+D+F M L P E+TF +L AC+ L+ GR+ L++ R
Sbjct: 625 AGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKR 680
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 249/484 (51%), Gaps = 48/484 (9%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FT A ++S CA ++ G+++H +++ G + SLI+MYSKC + A
Sbjct: 181 NQFTYAIVLSS---CARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDAR 237
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +P+ ++ AMI+G+ + L F M++LG++PD+ F +I C
Sbjct: 238 KIFDAV-VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITAC--- 293
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
V +G +++A +F ++P +VV WN M+
Sbjct: 294 ---------------------VGLGR-----------LDDACDLFVQMPNTNVVAWNVMI 321
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+G+ + G +A++ F+ M K G+ +R T+ VLSA+ + G +VH +K G +
Sbjct: 322 SGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN 381
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V V ++LI+MY K + + A ++F+ ++E+++ WN+++ + Q G ++LF M
Sbjct: 382 SNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM 441
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
GF PD T++++L AC+ L L GRQ+H +I+ + N +F+ N L+D
Sbjct: 442 RGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYN--------LFVENTLVD 493
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG++ +A+ F + +D SWN +I+GY + EA +MF M + PDEV+
Sbjct: 494 MYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVS 553
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+LS C++ L QG + + + G+ + + +IDM + G + A + M
Sbjct: 554 LASILSGCANLQALEQGEQVHCFL-VKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCM 612
Query: 508 PNEA 511
P+ +
Sbjct: 613 PSRS 616
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 257/517 (49%), Gaps = 20/517 (3%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
I I+ F + + S T ++ + IASL+ L G +H+ ++ G+
Sbjct: 331 IEAIDFFKNMWKTGVKSTRSTLG---SVLSAIASLEA------LNYGLLVHAQAIKQGLN 381
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
+ +SLINMY+KC +M+ A VF+ L E N+ +NAM+ G+ N +A K + F+
Sbjct: 382 SNVYVGSSLINMYAKCEKMEAAKKVFDALD-ERNLVLWNAMLGGYAQNGYASKVMKLFSE 440
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
MR G PD++T+ ++ C + + +++H + K + ++++ + LV+ Y KC
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA 500
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+EEA + FE + RD V WNA++ GY Q + +A +FRRM +GI ++ +LS
Sbjct: 501 LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSG 560
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ + G VH +VK G + + ++LIDMY K + A +F M + + S
Sbjct: 561 CANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSM 620
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+I+ + Q + + LF M + G P +TF+++L AC+ L GRQIH I
Sbjct: 621 NAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQK 679
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMD 423
GL +G F+ +L+ MY DA ++F++ K W +I G+ +
Sbjct: 680 RGLLYDGD-------FLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQN 732
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +EAL ++ M +PD+ TF VL ACS L GR L+ G+
Sbjct: 733 GCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI-FHVGLDSDELT 791
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ V+DM + G + + ++ M ++ + + W +++
Sbjct: 792 GSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 192/426 (45%), Gaps = 62/426 (14%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH K G +GSA+V+ Y KC +E A K F +L RD++ WN++++ Y++
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + + F + G+ ++FT VLS+ + G+ VH V+KMG++
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+LIDMY K + +A +IF+ + + D SW +++ + Q G + L++F+ M G
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280
Query: 334 PDLVTFSTVLPACSHLAAL---------MHGRQIHGY-IVVNGLAKNGSCKDIDDVFMN- 382
PD V F TV+ AC L L M + + ++++G K G + D F N
Sbjct: 281 PDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNM 340
Query: 383 -----------------------------------------------NALMDMYTKCGSM 395
++L++MY KC M
Sbjct: 341 WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKM 400
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+ VF + ++++ WN M+ GY +G + + +FS M PDE T+ +LSAC
Sbjct: 401 EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSAC 460
Query: 456 SHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ L GR+ +++ + +E+ ++DM + G L EA + + N N V
Sbjct: 461 ACLECLEMGRQLHSFIIKHNFEYNLFVEN--TLVDMYAKCGALEEARQQFEFIRNRDN-V 517
Query: 515 VWRTLL 520
W ++
Sbjct: 518 SWNAII 523
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 8/210 (3%)
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ + +H +K G+ S + +A++D+Y K V A + F +E++DI +WNS+++++
Sbjct: 98 RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G+ + + F + + G P+ T++ VL +C+ L + G+Q+H ++ G N
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
C+ +L+DMY+KCGS+ DA+ +F + D SW MI GY G +EAL
Sbjct: 218 FCE--------GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALK 269
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
+F M + L PD+V FV V++AC G L
Sbjct: 270 VFEDMQKLGLVPDQVAFVTVITACVGLGRL 299
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 24/153 (15%)
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ +A++D+Y KCG++ A F ++ K+D+ +WN ++ Y G ++ + F +
Sbjct: 118 LGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG 177
Query: 441 LKPDEVTFVGVLSACS-----------HSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ P++ T+ VLS+C+ H G + G EF E +ID
Sbjct: 178 VSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS------------LID 225
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
M + G L +A ++ A+ + + V W ++A
Sbjct: 226 MYSKCGSLVDARKIFDAVV-DPDTVSWTAMIAG 257
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 336/599 (56%), Gaps = 11/599 (1%)
Query: 28 HPFTLATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
H + +A L Q A L KG+++H+ ++R G + + +N+YSKC ++ Y
Sbjct: 70 HKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYT 129
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ +F+ +S + N+ ++ ++I+GF N + L F MR G + ++ +++ C
Sbjct: 130 IKLFDKMS-QRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTS 188
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ A+ ++H LV K G ++++GS L + Y KC + +A K FEE+P +D VLW +M
Sbjct: 189 LGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSM 248
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ + G+F KAL + +M + +++ + + LSA + G+ +H ++K+G+
Sbjct: 249 IDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGF 308
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ + NAL DMY K + A +F++ + I S +I+ + + + L F
Sbjct: 309 EYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFV 368
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G +P+ TF++++ AC++ A L HG Q+HG +V + D F+++ L
Sbjct: 369 DLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKR--------DPFVSSTL 420
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCG + +F ++ D +WN ++ + G G+ A++ F+ M LKP+
Sbjct: 421 VDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNA 480
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTFV +L CSH+G + G + ME YGVVP EHY+CVID+LGRAG+L EA +
Sbjct: 481 VTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFIN 540
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP E N W + L A ++HG+ + A+ AA ++ +LEP + G +VL+SNIY ++E+
Sbjct: 541 NMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWED 600
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V +R ++ N+ K PG SW+++++ H F D SHP+ K IY +L +L +++ G
Sbjct: 601 VQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIG 659
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/617 (33%), Positives = 335/617 (54%), Gaps = 43/617 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYALFVFNNLSCE 96
L L T++ K +EIH+ M+ TG+I +++ L+ S+ + Y + NN +
Sbjct: 58 LSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN-AAN 116
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
NVF++N I G+ ++ + + N +R+ +PD YT+P L K C +
Sbjct: 117 LNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I G V +LG D D+++ +A+++ + C + A K+F+E +RD+V WN+++NGY + G
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A +++ +M + + T+ GV+SA + GR +H + +MG + VP+ NA
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-------- 327
L+DMY K K + A +FE M +K + SW +++ + + G + +RLF+ M
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 328 --LSAGF---------------------QPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
L GF PD +T L ACS L AL G +H Y+
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ L N V + AL+DMY KCG+++ A VF +M ++ +W +I G + G
Sbjct: 417 HNLTMN--------VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHG 468
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
Q A+ FS M L PDE+TF+GVLSAC H G + QGR++ M S+YG+ P ++HY
Sbjct: 469 QPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHY 528
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
+C++D+LGRAG L EA EL +MP E + VVW L SR+HGN + E AA ++ +L+P
Sbjct: 529 SCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDP 588
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
G YVL++N+Y +E+ +R M ++ V K PGCS IE+ ++ FI D+SHP
Sbjct: 589 HDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHP 648
Query: 605 EAKSIYAELHSLTARLR 621
+++ IY L LT ++
Sbjct: 649 QSEKIYECLTRLTRQIE 665
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L G +H Y+ + + + T+L++MY+KC +K A+ VF +
Sbjct: 390 TVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
N T+ A+I G + + +F+ M +G++PD+ TF ++ CC V +
Sbjct: 450 PGR-NSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYA 211
+ + + K G+ + S LV+ + F+EEA ++ +P D V+W A+ G
Sbjct: 509 RDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSR 568
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G H MG R ++ +D G+
Sbjct: 569 IHGNVH------------------------------MG----ERAASKLLELDPHDGGIY 594
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
V+ L +MYG +A ++ +MMEE+ +
Sbjct: 595 VL--LANMYGDANMWEQARKVRKMMEERGV 622
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 316/581 (54%), Gaps = 48/581 (8%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+YS + +L +FN + P + ++I + S+ + L F M G+ PD
Sbjct: 49 IYSHINLLHDSLRLFNTIHFPP-ALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHN 107
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA------- 188
FP ++K C +M + + +HG + ++GLD D+Y G+AL+N Y K +F+EE+
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGA 167
Query: 189 -------------------------LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
K+FE +P +D+V WN ++ G A+ G + + L +
Sbjct: 168 GEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMI 227
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R M + FT++ VL + G+ +HG ++ G D+ + V ++LIDMY K
Sbjct: 228 REMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKC 287
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V ++ +F ++ E+D SWNSI+ Q G D LR F +ML A +P +FS+++
Sbjct: 288 TRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
PAC+HL L G+Q+HGYI NG +N +F+ ++L+DMY KCG++R A+ +F
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDEN--------IFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M +D+ SW MI+G + GQ +A+++F M +K VL+ACSH G + +
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDE 452
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++ M +G+ P +EHY V D+LGRAG+L EAY+ M +W TLL+A
Sbjct: 453 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC 512
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R+H N D+AE A R+ +++P + G Y+L++NIY A +++E R +MR+ +RK P
Sbjct: 513 RVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPA 572
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSWIE+K+ ++ F++ D SHP + I + L + + G
Sbjct: 573 CSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEG 613
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 151/301 (50%), Gaps = 13/301 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L L A ++ +G+EIH +R G+ +SLI+MY+KC ++ + V
Sbjct: 240 FTLSSV---LPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV 296
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L+ E + ++N++I+G N +GL FF M + P Y+F ++ C +
Sbjct: 297 FTLLT-ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTT 355
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + G D +++I S+LV+ Y KC + A ++F+ + LRD+V W AM+ G
Sbjct: 356 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMG 415
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
A G+ A+E+F +M EGI VL+A G + + + G
Sbjct: 416 CALHGQAPDAIELFEQMETEGI-------KAVLTACSHGGLVDEAWKYFNSMTRDFGIAP 468
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDRM 327
GV A+ D+ G+ + EA + M S W ++++ N D ++ +R+
Sbjct: 469 GVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRI 528
Query: 328 L 328
L
Sbjct: 529 L 529
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/577 (34%), Positives = 334/577 (57%), Gaps = 14/577 (2%)
Query: 53 EIHSYMLRTGII-DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++H+ LR G++ + + SL++ Y + ++ A VF+ + E +V +NAM+SG
Sbjct: 87 QLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMP-ERDVPAWNAMLSGLCR 145
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A + M GV D T ++ C + +H K GL ++++
Sbjct: 146 NTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFV 205
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL++ Y K + EA VF + LRD+V WN++++ Q G+ A+E+F M + G+
Sbjct: 206 CNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGV 265
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNALIDMYGKGKCVGEAL 290
T+ + SA+ G + VH V + G+D G + NA++DMY K + A
Sbjct: 266 CPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQ 325
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHL 349
++F+ + ++D+ SWN+++T + Q G + +R+++ M + G +P TF +VLPA S+L
Sbjct: 326 KVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYL 385
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
L G ++H + GL DV++ L+D+Y KCG + +A +F M ++
Sbjct: 386 GGLQQGMRMHALSIKTGLNL--------DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRS 437
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN +I G G+ G G +AL +FS M + ++KPD VTFV +L+ACSH+G + QGR F
Sbjct: 438 TGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFD 497
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
LM++ YG+VP +HYTC++DMLGRAGQL+EA+E +MP + + VW LL A R+HGN
Sbjct: 498 LMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNV 557
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
++ ++A+Q +F+L+P + G YVLMSN+Y GK++ V +R +R+QN++K PG S +E+
Sbjct: 558 EMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEV 617
Query: 590 KDGLHTFISSDRS--HPEAKSIYAELHSLTARLREHG 624
K + F S ++ HP+ + I LH L A+++ G
Sbjct: 618 KGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAG 654
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 222/433 (51%), Gaps = 16/433 (3%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALK 190
PD +TFP L++ + ++H +LG L +V+ +LV+ YL+ + EA +
Sbjct: 67 PDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+E+P RDV WNAM++G + A+ + RM EG+ T++ VL +++G
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
V+H VK G + V NALID+YGK + EA +F M +D+ +WNSI++
Sbjct: 184 RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISA 243
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+EQ G + LF M+ +G PD++T ++ A + + + +H Y+ G
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGW--- 300
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+ D+ NA++DMY K + AQ VF + +DV SWN +I GY +G EA+
Sbjct: 301 ----DVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAI 356
Query: 431 DMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+++ M + LKP + TFV VL A S+ G L QG L + G+ + TC+ID
Sbjct: 357 RIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHAL-SIKTGLNLDVYVTTCLID 415
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN--TDLAEIAAQRVFQLEPGHC 547
+ + G+L EA L MP + W ++A +HG+ L+ + + +++P H
Sbjct: 416 LYAKCGKLVEAMFLFEHMPRRSTG-PWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHV 474
Query: 548 GNYVLMSNIYVAG 560
L++ AG
Sbjct: 475 TFVSLLAACSHAG 487
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 29/309 (9%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ L ++ LQ+G +H+ ++TG+ T LI++Y+KC ++ A+F+F +
Sbjct: 373 GTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEH 432
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + +NA+I+G + K L F+ M+Q + PD TF L+ C V +
Sbjct: 433 MP-RRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQ 491
Query: 153 VKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGY 210
+ L+ + G+ + +V+ + ++EA + + +P++ D +W A++ G
Sbjct: 492 GRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALL-GA 550
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+I H +E+ + S+ + V G++ ++ + K+G GV
Sbjct: 551 CRI---HGNVEMGKVASQNLFELDPENV----------GYYV---LMSNMYAKIGKWDGV 594
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR----LFDR 326
+ +L+ K G + ME K S T E H+ R L +
Sbjct: 595 DAVRSLVRRQNLQKTPG-----WSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAK 649
Query: 327 MLSAGFQPD 335
M SAG+ PD
Sbjct: 650 MKSAGYVPD 658
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 325/584 (55%), Gaps = 11/584 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C N+ G+ +H + +++G+I+S ++LI+MY K +++ VF ++ +
Sbjct: 163 ALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMT-KR 221
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ A+I+G + + L +F+ M V D +TF +K D + K IH
Sbjct: 222 NVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIH 281
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G D ++ + L Y KC + +++FE++ + DVV W ++ Y Q GE
Sbjct: 282 TQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEE 341
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+E F+RM K + +++T V+SA + K G +HG V+++G + V N+++
Sbjct: 342 HAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIV 401
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y K + A +F + KDI SW++I+ V+ Q G M G +P+
Sbjct: 402 TLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEF 461
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMR 396
S+VL C +A L G+Q+H +++ C ID + +++AL+ MY+KCGS+
Sbjct: 462 ALSSVLSVCGSMALLEQGKQVHAHVL---------CIGIDHEAMVHSALISMYSKCGSVE 512
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A +F M ++ SW MI GY G +EA+++F + LKPD VTF+GVL+ACS
Sbjct: 513 EASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS 572
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G + G + LM + Y + P+ EHY C+ID+L RAG+L+EA + +MP + VVW
Sbjct: 573 HAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVW 632
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL + R+HG+ D A+++ +L+P G ++ ++NIY A G+++E IR M+ +
Sbjct: 633 STLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSK 692
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
V K G SW+ + D L+ F++ D++HP+++ I L L+A +
Sbjct: 693 GVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANI 736
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 168/322 (52%), Gaps = 6/322 (1%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+H F +A L+ A + L G+ IH+ ++ G +S I +L MY+KC + Y
Sbjct: 258 SHTFAIA-----LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYV 312
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ +F + P+V ++ +I+ + ++ F MR+ V P+KYTF +I C +
Sbjct: 313 MRLFEKMKM-PDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACAN 371
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ ++IHG V +LGL + + +++V Y K ++ A VF + +D++ W+ +
Sbjct: 372 LAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTI 431
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ Y+Q G +A + M +EG + F ++ VLS M + G+ VH V+ +G
Sbjct: 432 IAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGI 491
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
D V +ALI MY K V EA +IF M+ +I SW +++ + + G + LF++
Sbjct: 492 DHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEK 551
Query: 327 MLSAGFQPDLVTFSTVLPACSH 348
+ S G +PD VTF VL ACSH
Sbjct: 552 ISSVGLKPDYVTFIGVLTACSH 573
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 156/332 (46%), Gaps = 11/332 (3%)
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMG 249
+F+++ RD + W ++ GY + ++AL +F M + G+ +F ++ L A +
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGV 171
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G ++HG VK G + V V +ALIDMY K + + +F+ M ++++ SW +I+
Sbjct: 172 NICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIA 231
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
G + L F M + D TF+ L A + + L HG+ IH + G +
Sbjct: 232 GLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE 291
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+ F+ N L MY KCG +F KM DV SW +I Y G+ + A
Sbjct: 292 SS--------FVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHA 343
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
++ F M ++ + P++ TF V+SAC++ G + + R G+V + ++
Sbjct: 344 VEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHV-LRLGLVDALSVANSIVT 402
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ ++G L A L + + W T++A
Sbjct: 403 LYSKSGLLKSA-SLVFHGITRKDIISWSTIIA 433
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 131/227 (57%), Gaps = 9/227 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T A I++ CA+ + G++IH ++LR G++D+ S++ +YSK +K A V
Sbjct: 360 YTFAAVISA---CANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLV 416
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ ++ ++ +++ +I+ + +A + D+ + MR+ G P+++ ++ C +
Sbjct: 417 FHGIT-RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL 475
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + K++H V +G+D + + SAL++ Y KC +EEA K+F + + +++ W AM+NG
Sbjct: 476 LEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMING 535
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA-----LIMMGFF 251
YA+ G +A+ +F ++S G+ T GVL+A ++ +GF+
Sbjct: 536 YAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFY 582
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKL 441
N+ + K G + ++ +F KM+ +D SW +I GY EAL +FS M + L
Sbjct: 94 NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
+ D+ L AC + G E L + G++ ++ + +IDM + G++ +
Sbjct: 154 QRDQFMISVALKACGLGVNICFG-ELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGC 212
Query: 502 ELALAMPNEANPVVWRTLLA 521
+ M + N V W ++A
Sbjct: 213 RVFKKM-TKRNVVSWTAIIA 231
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 297/483 (61%), Gaps = 10/483 (2%)
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C A+ E +++H + K + VY+ + L+ Y KC+ + +A +V +E+P R+VV W
Sbjct: 20 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 79
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM++GY+Q G +AL +F M G + FT VL++ F+ GR +H +V+K
Sbjct: 80 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 139
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
++S + V ++L+DMY K + EA +F+ + E+D+ S +I++ + Q G + L L
Sbjct: 140 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 199
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F R+ G + + VT+++VL A S LAAL HGRQ+H +++ L V + N
Sbjct: 200 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY--------VVLQN 251
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLK 442
+L+DMY+KCGS+ ++ +F M ++ V SWN M++GY G G+EA+++F M E K+K
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311
Query: 443 PDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
PD VTF+ VLS CSH G +G E F ++ + G P IEHY CV+D+ GRAG++ EA+
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
E MP E +W +LL A R+H N + E A+R+ ++E + GNYV++SN+Y + G
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++++V +R M+++ V K PG SWIEL LHTF +SDRSHP + ++A++ L+ +++
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 491
Query: 622 EHG 624
E G
Sbjct: 492 EAG 494
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 206/382 (53%), Gaps = 11/382 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L C QT +++GQ +H++M++T + P+ + T LI +Y+KC + A V + + E
Sbjct: 17 LTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP-ER 74
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ AMISG+ +A + L F M G P+++TF ++ C ++IH
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
LV K + +++GS+L++ Y K + EA +VF+ LP RDVV A+++GYAQ+G
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++FRR+ +EG+ + T VL+AL + +GR VH V++ V + N+LI
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDL 336
DMY K + + IF+ M E+ + SWN+++ + + G + LF M +PD
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF VL CSH G +I Y +VN K+G +I+ ++D++ + G +
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIF-YEMVN--QKDGFEPEIEHY---GCVVDLFGRAGRVE 368
Query: 397 DAQMVFTKMSKKDVAS-WNIMI 417
+A KM + A+ W ++
Sbjct: 369 EAFEFIKKMPFEPTAAIWGSLL 390
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 148/288 (51%), Gaps = 12/288 (4%)
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VL+ I + G+ VH ++K Y+ V + LI +Y K +C+G+A + + M E++
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ SW ++++ + Q G L LF ML +G P+ TF+TVL +C+ + GRQIH
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
++ + +F+ ++L+DMY K G + +A+ VF + ++DV S +I GY
Sbjct: 136 LVIKTSFESH--------IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGY 187
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVP 479
G +EALD+F + ++ + VT+ VL+A S L GR+ ++ ++
Sbjct: 188 AQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYV 247
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+++ +IDM + G L + + +MP E + W +L HG
Sbjct: 248 VLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAMLVGYSKHG 292
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 145/288 (50%), Gaps = 8/288 (2%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
T + FT AT + S C + Q G++IHS +++T +SL++MY+K ++
Sbjct: 107 TAPNEFTFATVLTS---CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 163
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF+ L E +V + A+ISG+ + LD F +++ G+ + T+ ++
Sbjct: 164 EARRVFDGLP-ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 222
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ A+ +++H V + L V + ++L++ Y KC + + ++F+ +P R V+ WN
Sbjct: 223 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWN 282
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV- 262
AM+ GY++ G +A+E+F+ M +E + T VLS G G + +V
Sbjct: 283 AMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 342
Query: 263 -KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
K G++ + ++D++G+ V EA E + M E W S++
Sbjct: 343 QKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 390
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 317/566 (56%), Gaps = 10/566 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-PNVFTYNAM 105
+L+ +IH+ ++ P +LIN+Y+KC + AL +F+ + T+ ++
Sbjct: 157 SLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSL 216
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I+ + + L FN MR G P+++TF ++ M VL +++H L+ K G
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGF 276
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D ++++G+ALV+ Y KC M A++VF+++P R++V WN+M+ G+ + +A+ VF+
Sbjct: 277 DANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKD 336
Query: 226 MSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+ +E + + +V+ VLSA MG GR VHG+VVK G VMN+L+DMY K +
Sbjct: 337 VLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCR 396
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
E +++F+ + ++D+ +WN ++ Q + F M G PD +FSTVL
Sbjct: 397 FFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLH 456
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ + LAAL G IH I+ G KN + + +L+ MY KCGS+ DA VF
Sbjct: 457 SSASLAALHQGTAIHDQIIKLGYVKN--------MCILGSLITMYAKCGSLVDAYQVFEG 508
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ +V SW MI Y + G + +++F M ++P VTFV VLSACSH+G + +G
Sbjct: 509 IEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG 568
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
M+ + + P EHY C++D+LGRAG L+EA +MP + P VW LL A R
Sbjct: 569 LAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACR 628
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+GN + AA+R+F++EP + GNYVL++N+ G+ EE ++R M VRK PGC
Sbjct: 629 KYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGC 688
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIY 610
SWI++K+ F + DRSH + IY
Sbjct: 689 SWIDVKNMTFVFTAHDRSHSSSDEIY 714
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 14/346 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA+ L G+++H +++ G++ + SL++MY KC + +F + + +
Sbjct: 354 LSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRD 412
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V T+N ++ GF ND + ++F MR+ G+LPD+ +F ++ + A+ + IH
Sbjct: 413 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHD 472
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KLG ++ I +L+ Y KC + +A +VFE + +V+ W AM++ Y G ++
Sbjct: 473 QIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQ 532
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNAL 276
+E+F M EGI S T VLSA G + G + H +K +D G +
Sbjct: 533 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKKIHDMNPGPEHYACM 591
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGN----HDGTLRLFDRMLSAG 331
+D+ G+ + EA E M K S W +++ + GN + RLF+
Sbjct: 592 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM---EP 648
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ P + + C+ L ++ + VNG+ K C ID
Sbjct: 649 YNPG--NYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWID 692
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 336/591 (56%), Gaps = 10/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A+LQ C + + G EIH+ +L++ + +L+ M+ + +M YA +F+ L
Sbjct: 114 TLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDEL 173
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ T+N+MI+GF N + L FF ++ + PD+ + ++ + +L
Sbjct: 174 DEKDNI-TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNG 232
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K LD ++ IG+ L++ Y KC + A VF+++ +D++ W ++ YAQ
Sbjct: 233 KEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQN 292
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+AL++ R++ +G+ + + L A + + + VHG +K G S + +
Sbjct: 293 NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQ 351
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N +ID+Y + A +FE ++ KD+ SW S+++ + G + L +F M +
Sbjct: 352 NMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVE 411
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +T ++L A + L+AL G++IHG+I G GS N+L+DMY CG
Sbjct: 412 PDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTV--------NSLVDMYACCG 463
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ +A VF K + W MI YGM G+GK A+++FS M + KL PD +TF+ +L
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLY 523
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG +++G+ L M+ +Y + P EHY C++D+LGRA L EAY +M E
Sbjct: 524 ACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA 583
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW L A R+H N L EIAAQ++ L+P G+YVL+SN++ A G++++V ++R M
Sbjct: 584 EVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRM 643
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ ++KNPGCSWIE+ + +HTF+ D+SHPE+ IY +L +T +L + G
Sbjct: 644 KGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEG 694
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 258/504 (51%), Gaps = 11/504 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF T L+ C ++ +G EIH +++ G SL++MY+KC + A
Sbjct: 7 PFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARK 66
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ ++ +V ++N++IS + N + L F M++ GV + YT ++ C D
Sbjct: 67 LFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSS 126
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+IH + K LDVY+ +ALV +++ M A ++F+EL +D + WN+M+
Sbjct: 127 FKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIA 186
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ Q G +++AL+ F + + ++ +L+A +G+ NG+ +H +K DS
Sbjct: 187 GFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDS 246
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ + N LIDMY K CV A +F+ M KD+ SW +++ + Q H L+L ++
Sbjct: 247 NLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQ 306
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ G D + + L ACS L L H +++HGY + GL+ D+ M N ++D+
Sbjct: 307 TKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS---------DLMMQNMIIDV 357
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y CG++ A +F + KDV SW MI Y +G EAL +F M E ++PD +T
Sbjct: 358 YADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITL 417
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +LSA + L++G+E + R G + ++DM G L AY++ +
Sbjct: 418 VSILSAAASLSALNKGKEIHGFI-FRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTR 476
Query: 509 NEANPVVWRTLLAASRLHGNTDLA 532
+++ V+W T++ A +HG A
Sbjct: 477 SKS-LVLWTTMINAYGMHGRGKAA 499
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 204/398 (51%), Gaps = 12/398 (3%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
MR LGV D +TFPC++K C V + +IHGL+ K G D V++ ++LV+ Y KC
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 185 MEEALKVFEELPLR-DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ A K+F+ + R DVV WN++++ Y+ G+ +AL +FR M K G+ + +T+ L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A F K G +H ++K V V NAL+ M+ + + A IF+ ++EKD +
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNS++ Q G ++ L+ F + A +PD V+ ++L A L L++G++IH Y +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
N L N + + N L+DMY+KC + A +VF KM KD+ SW +I Y +
Sbjct: 241 KNWLDSN--------LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQN 292
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
EAL + + + D + L ACS LS +E R + +
Sbjct: 293 NCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR--GLSDLMM 350
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ID+ G +N A + ++ + + V W ++++
Sbjct: 351 QNMIIDVYADCGNINYATRMFESIKCK-DVVSWTSMIS 387
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 337/630 (53%), Gaps = 45/630 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+TL + L+ C +L G+ +H+ L++ I S I +YSKC + A
Sbjct: 6 WTLQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHA 65
Query: 90 FNNLSCEPNVFTYNAMISGFYS--------------------------NDFAFKG----- 118
FN + EPNVF++NA+I+ + N +A +G
Sbjct: 66 FNQ-THEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSA 124
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L F MR++G++ D +TF +I CC+ + + ++++H L F G D V + ++L+
Sbjct: 125 LSLFGEMREMGLVMDGFTFSGVITACCNHVGL--IRQLHSLAFSSGFDSYVSVKNSLLTY 182
Query: 179 YLKCQFMEEALKVFEEL--PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
Y K +EEA VF + +RD V WN+M+ Y Q KAL ++R M G + F
Sbjct: 183 YSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMF 242
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIFEM 295
T+ VL+ + G H +K G++ V + LIDMY K G + E+ ++FE
Sbjct: 243 TLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEE 302
Query: 296 MEEKDIFSWNSIMTVHEQCGNHD-GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+ D+ WN++++ + Q L F +M AG+ PD +F + ACS+L++
Sbjct: 303 ICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQ 362
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+Q H + + + N + +NNAL+ MY+KCG+++DA+ +F +M + + + N
Sbjct: 363 GKQFHALAMKSEIPSN-------QISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLN 415
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+I GY G G E+L++F M A + P +T V +LSAC+H+G + +G+++ +M+
Sbjct: 416 SIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDI 475
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+G+ P EHY+C+ID+LGRAG+L+EA L MP W LL A R +GN +LAE
Sbjct: 476 FGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEK 535
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
AA + QLEP + Y++++++Y A K+EE IR MR + +RK PGCSWIEL +H
Sbjct: 536 AANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVH 595
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F++ D SHP K I+ L + +++ G
Sbjct: 596 VFVAEDNSHPRIKEIHMYLDEMFVKMKRAG 625
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/483 (38%), Positives = 297/483 (61%), Gaps = 10/483 (2%)
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C A+ E +++H + K + VY+ + L+ Y KC+ + +A +V +E+P R+VV W
Sbjct: 487 CISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSW 546
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM++GY+Q G +AL +F M G + FT VL++ F+ GR +H +V+K
Sbjct: 547 TAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIK 606
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
++S + V ++L+DMY K + EA +F+ + E+D+ S +I++ + Q G + L L
Sbjct: 607 TSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F R+ G + + VT+++VL A S LAAL HGRQ+H +++ L V + N
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFY--------VVLQN 718
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLK 442
+L+DMY+KCGS+ ++ +F M ++ V SWN M++GY G G+EA+++F M E K+K
Sbjct: 719 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 778
Query: 443 PDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
PD VTF+ VLS CSH G +G E F ++ + G P IEHY CV+D+ GRAG++ EA+
Sbjct: 779 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 838
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
E MP E +W +LL A R+H N + E A+R+ ++E + GNYV++SN+Y + G
Sbjct: 839 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 898
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++++V +R M+++ V K PG SWIEL LHTF +SDRSHP + ++A++ L+ +++
Sbjct: 899 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 958
Query: 622 EHG 624
E G
Sbjct: 959 EAG 961
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 206/382 (53%), Gaps = 11/382 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L C QT +++GQ +H++M++T + P+ + T LI +Y+KC + A V + + E
Sbjct: 484 LTECISQTAIREGQRVHAHMIKT-CYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP-ER 541
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ AMISG+ +A + L F M G P+++TF ++ C ++IH
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
LV K + +++GS+L++ Y K + EA +VF+ LP RDVV A+++GYAQ+G
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++FRR+ +EG+ + T VL+AL + +GR VH V++ V + N+LI
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 721
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDL 336
DMY K + + IF+ M E+ + SWN+++ + + G + LF M +PD
Sbjct: 722 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF VL CSH G +I Y +VN K+G +I+ ++D++ + G +
Sbjct: 782 VTFLAVLSGCSHGGMEDRGLEIF-YEMVN--QKDGFEPEIEHY---GCVVDLFGRAGRVE 835
Query: 397 DAQMVFTKMSKKDVAS-WNIMI 417
+A KM + A+ W ++
Sbjct: 836 EAFEFIKKMPFEPTAAIWGSLL 857
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 154/308 (50%), Gaps = 12/308 (3%)
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
E M +G+ + VL+ I + G+ VH ++K Y+ V + LI +Y
Sbjct: 463 EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K +C+G+A + + M E+++ SW ++++ + Q G L LF ML +G P+ TF+
Sbjct: 523 NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
TVL +C+ + GRQIH ++ + +F+ ++L+DMY K G + +A+
Sbjct: 583 TVLTSCTSSSGFQLGRQIHSLVIKTSFESH--------IFVGSSLLDMYAKAGKICEARR 634
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF + ++DV S +I GY G +EALD+F + ++ + VT+ VL+A S
Sbjct: 635 VFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAA 694
Query: 461 LSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L GR+ ++ ++ +++ +IDM + G L + + +MP E + W +
Sbjct: 695 LDHGRQVHSHVLRAKLPFYVVLQN--SLIDMYSKCGSLTYSRRIFDSMP-ERTVISWNAM 751
Query: 520 LAASRLHG 527
L HG
Sbjct: 752 LVGYSKHG 759
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 145/288 (50%), Gaps = 8/288 (2%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
T + FT AT + S C + Q G++IHS +++T +SL++MY+K ++
Sbjct: 574 TAPNEFTFATVLTS---CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 630
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF+ L E +V + A+ISG+ + LD F +++ G+ + T+ ++
Sbjct: 631 EARRVFDGLP-ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL 689
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ A+ +++H V + L V + ++L++ Y KC + + ++F+ +P R V+ WN
Sbjct: 690 SGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWN 749
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV- 262
AM+ GY++ G +A+E+F+ M +E + T VLS G G + +V
Sbjct: 750 AMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVN 809
Query: 263 -KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
K G++ + ++D++G+ V EA E + M E W S++
Sbjct: 810 QKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 857
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/501 (38%), Positives = 283/501 (56%), Gaps = 9/501 (1%)
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
H + P + L++ C A+ K++H V G D I + LVN Y C
Sbjct: 65 HAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCD 124
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ A +F+ +P ++ LWN ++ GYA G + A++++ +M G+ FT VL
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A + ++GR +H VV+ G++ V V ALIDMY K CVG A E+F+ + +D
Sbjct: 185 ACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVL 244
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNS++ + Q G+ D L L M+ G +P T T + A + AAL GR++HG
Sbjct: 245 WNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHG--- 301
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L+ + D V AL+DMY KCGS+R A+ +F ++ K V SWN MI GY M
Sbjct: 302 ---LSWRQEFESHDKV--KTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMH 356
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G EALD+F M KPD +TFVGVLSACSH G L +G F M Y + PT++H
Sbjct: 357 GHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQH 415
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
YTC++D+LG +G+L+EAY L + M + VW LL + ++H N +L EIA +R+ +LE
Sbjct: 416 YTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELE 475
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
P GNYV++SNIY GK+E V +R M + ++K+ CSWIE+K+ +H F+S D SH
Sbjct: 476 PDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSH 535
Query: 604 PEAKSIYAELHSLTARLREHG 624
P + IY+EL + ++E G
Sbjct: 536 PLSDEIYSELERVGGLMKEAG 556
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 174/337 (51%), Gaps = 10/337 (2%)
Query: 27 NHPFTLATCIAS--------LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
++P +TC+ LQ C + ++ G+++H+ + G + T L+N+Y
Sbjct: 62 SNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYC 121
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFP 138
C + A +F+ + + N+F +N +I G+ N + + M G++PD +TFP
Sbjct: 122 VCDSLSSARLLFDRIP-KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFP 180
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
++K C + A+ ++IH V + G + DV++G+AL++ Y KC + A +VF+++ +R
Sbjct: 181 FVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVR 240
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
D VLWN+M+ Y+Q G L + M G+ + T+ +SA GR +H
Sbjct: 241 DAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELH 300
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
G+ + ++S V AL+DMY K V A +FE + K + SWN+++T + G+
Sbjct: 301 GLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHAT 360
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
L LF+ M +PD +TF VL ACSH L G
Sbjct: 361 EALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEG 396
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 338/605 (55%), Gaps = 14/605 (2%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT--GIIDSPLSITSLINMYSKC 80
+ T HP L I L++ A NL+ G+ IH++++ T D+ + + SLIN+Y+KC
Sbjct: 18 SSTVGHP--LEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKC 75
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPC 139
Q+ A +F+ + + NV ++ A+++G++ N + L F M + + P++Y F
Sbjct: 76 DQIMVARILFDGMR-KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFAT 134
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+I C D V+E + HG K GL Y+ +AL+ Y + ++ A+ V+ E+P D
Sbjct: 135 IISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLD 194
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V +N ++NG + G +ALEV RM E I T + + G VH
Sbjct: 195 VFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHC 254
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ + G + V +A+IDMYGK + A ++F ++ K++ SW +I+ + Q G +
Sbjct: 255 RMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEE 314
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L F M G P+ TF+ +L +C+ ++AL HG+ +H I +G D +
Sbjct: 315 ALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFE--------DHI 366
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ NAL++MY+K GS+ A VF +M +D +W+ MI G G G+EAL +F M A
Sbjct: 367 IVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAA 426
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
K P VTFVGVLSAC+H G + +G +L + + G+ P +EHYTC++ +L +AG+L+E
Sbjct: 427 KECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDE 486
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A + P + + V WRTLL+A +H N L + A+ V Q++PG G Y+L+SN+Y
Sbjct: 487 AENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAK 546
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
+++ V+ IR MR++NV+K PG SWIE+++ +H F+S ++HPE+ IY ++ L
Sbjct: 547 AKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTM 606
Query: 620 LREHG 624
+R G
Sbjct: 607 IRPMG 611
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 345/587 (58%), Gaps = 13/587 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+Q C ++ +I S+ L+ G S + LI+ Y KC + YA VF+ + +
Sbjct: 84 IQQCIGIKSITDITKIQSHALKRGFHHSLGN--KLIDAYLKCGSVVYARKVFDEVP-HRH 140
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +N+MI+ + N + + +D + M G+LPD++TF + K D+ V E ++ HG
Sbjct: 141 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200
Query: 159 LVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
LG+ + +V++GSALV+ Y K M +A V +++ +DVVL+ A++ GY+ GE
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++L+VFR M+K+GI + +T++ VL + +GR++HG++VK G +S V +L+
Sbjct: 261 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLL 320
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + V ++L++F+ + +W S++ Q G + L F +ML + P+
Sbjct: 321 TMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 380
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+VL ACS LA L G+QIH ++ GL DID ++ AL+D Y KCGS
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGL-------DIDK-YVGAALIDFYGKCGSTEI 432
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF + + DV S N MI Y +G G EAL +FS M + L+P+ VT++GVLSAC++
Sbjct: 433 ARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNN 492
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G L +G + + T +HY C++D+LGRAG+L EA E+ + N ++ V+WR
Sbjct: 493 AGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEA-EMLINQVNISDVVIWR 551
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A R+HG+ ++A+ RV L P G +VL+SN+Y + G + +V++++ MR+
Sbjct: 552 TLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMR 611
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++KNP SW++++ +HTF++ D SHP + I +L L +++E G
Sbjct: 612 LKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELG 658
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 152/306 (49%), Gaps = 13/306 (4%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ +TL++ L C + +L G+ IH +++ G+ + S TSL+ MY +C + +L
Sbjct: 277 NEYTLSSV---LVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSL 333
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF PN T+ ++I G N L F M + + P+ +T +++ C +
Sbjct: 334 KVFKQF-INPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSL 392
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + K+IH +V K GLD+D Y+G+AL++ Y KC E A VF L DVV N+M+
Sbjct: 393 AMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMI 452
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
YAQ G H+AL++F M G+ + T GVLSA G + G H + +
Sbjct: 453 YSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEG--CH--IFSSARN 508
Query: 268 SGVPVMNA-----LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
SG + ++D+ G+ + EA + + D+ W ++++ G+ + R
Sbjct: 509 SGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKR 568
Query: 323 LFDRML 328
+ +R++
Sbjct: 569 VMNRVI 574
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/652 (33%), Positives = 359/652 (55%), Gaps = 43/652 (6%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+++K + NP ++ F+ + ++ FT A L+ CA L ++H+Y+ R
Sbjct: 24 LIAKNATQNPQTALTFFTRMQAHAVPSNNFTFP---ALLKACAALRRLLPTLQVHAYLTR 80
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSN---DFAF 116
G+ S +L++ Y KC YA VF+ + +V ++ A+IS + SN D AF
Sbjct: 81 LGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAF 140
Query: 117 KGLDFFNHMRQL------GVLPDKYTFPCLIKCC---CDVMAVLEVKKIHGLVFKLGLDL 167
K MR GV D + L+ C C + +HGLV K G +
Sbjct: 141 KAFGRMRWMRGWDGSECCGV--DVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVFRR 225
++G+++V+ Y C+ + A +VF +P+ RDVV WN++++G+ GE +AL F
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFED 258
Query: 226 MSKEG---IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK----MGYDSGVPVMNALID 278
M EG + +R TV +L + +G + VH + + V V+ AL+D
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG------F 332
M+ + + A EIF+ +E K++ W++++ +EQ + LRLF +ML G
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ VT +V+ ACS L A IH Y V GL + D + +AL+DM KC
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQ--------DARIASALIDMCAKC 430
Query: 393 GSMRDAQMVFTKM--SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
G + + VF++M S + V SW+ MI G+ G+GK AL++FS M +P+E+T++
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH+G + QG+ ME YG+ PT +HY C++D+LGRAG L+EA+ + L MP +
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +W +LLAA LHGN L EI +++ L+ G++VL++N+Y G++++V+ +R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R+ +RK PG S+IE+ + +++F++ DRSHPE++ IY EL L R+R+
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRK 662
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ KD F WNS++ N L F RM + + TF +L AC+ L L+
Sbjct: 13 ISHKDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASW 413
Q+H Y+ GLA D F AL+D Y KCG A VF +M + DV SW
Sbjct: 72 LQVHAYLTRLGLAA--------DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAK-------LKPDEVTFVGVLSACS---HSGFLSQ 463
+I Y +G EA F M + D V+ ++SAC+ S L +
Sbjct: 124 TALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR 183
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAA 522
G L+ +YG + ++ M + A+ + +P E VV W +L++
Sbjct: 184 GSAVHGLV-VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242
Query: 523 SRLHGNTDLA 532
L+G + A
Sbjct: 243 FTLNGEAERA 252
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 329/584 (56%), Gaps = 11/584 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ CA N+ G+ +H + +++G+I S ++LI+MY K +++ VF +
Sbjct: 130 ALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR- 188
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ A+I+G + +GL +F+ M + V D +TF +K D + K IH
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G D ++ + L Y KC + +++FE++ + DVV W +++ Y Q+GE
Sbjct: 249 TQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEE 308
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+E F+RM K + +++T V+S+ + K G +HG V+++G + + V N++I
Sbjct: 309 HAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSII 368
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y K + A +F + KDI SW++I++V+ Q G M G +P+
Sbjct: 369 TLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEF 428
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMR 396
S+VL C +A L G+Q+H +++ C ID + +++A++ MY+KCGS++
Sbjct: 429 ALSSVLSVCGSMALLEQGKQVHAHLL---------CIGIDHEAMVHSAIISMYSKCGSVQ 479
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A +F M D+ SW MI GY G +EA+++F + LKPD V F+GVL+AC+
Sbjct: 480 EASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN 539
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G + G + LM + Y + P+ EHY C+ID+L RAG+L+EA + +MP + VVW
Sbjct: 540 HAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVW 599
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL A R+HG+ D A+++ QL+P G ++ ++NIY A G+++E IR M+ +
Sbjct: 600 STLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSK 659
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
V K G SW+ + D L+ F++ D++HP+++ I L L+A +
Sbjct: 660 GVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANI 703
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 230/471 (48%), Gaps = 22/471 (4%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR- 126
L + S + K Q+ A ++F+ ++ + ++ +I+G+ + +++ L F++M
Sbjct: 58 LELNSELKQLVKQGQLCKARYMFDKMTHRDEI-SWTTLIAGYVNASDSYEALILFSNMWV 116
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
G D++ +K C + + + +HG K GL V++ SAL++ Y+K +E
Sbjct: 117 HPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIE 176
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+ +VFE++ R+VV W A++ G G + L F M + + T L A
Sbjct: 177 QGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASA 236
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+G+ +H +K G+D V+N L MY K + +FE M D+ SW +
Sbjct: 237 DSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTT 296
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+++ + Q G + + F RM + P+ TF+ V+ +C++LAA G QIHG+++ G
Sbjct: 297 LISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLG 356
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L ++ + + N+++ +Y+KCG ++ A +VF +++KD+ SW+ +I Y G
Sbjct: 357 L--------VNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYA 408
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH--- 483
KEA D S M KP+E VLS C L QG++ + + I+H
Sbjct: 409 KEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHL-----LCIGIDHEAM 463
Query: 484 -YTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAASRLHGNTDLA 532
++ +I M + G + EA ++ M + N ++ W ++ HG + A
Sbjct: 464 VHSAIISMYSKCGSVQEASKIFNGM--KINDIISWTAMINGYAEHGYSQEA 512
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 198/392 (50%), Gaps = 14/392 (3%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+H F +A L+ A + L G+ IH+ ++ G +S I +L MY+KC + Y
Sbjct: 225 SHTFAIA-----LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYV 279
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ +F + P+V ++ +IS + ++ F MR+ V P+KYTF +I C +
Sbjct: 280 MRLFEKMRM-PDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCAN 338
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ A ++IHG V +LGL + + ++++ Y KC ++ A VF + +D++ W+ +
Sbjct: 339 LAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTI 398
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ Y+Q G +A + M +EG + F ++ VLS M + G+ VH ++ +G
Sbjct: 399 ISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGI 458
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
D V +A+I MY K V EA +IF M+ DI SW +++ + + G + LF++
Sbjct: 459 DHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEK 518
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ S G +PD V F VL AC+H + G + ++++ + + K+ L+
Sbjct: 519 ISSVGLKPDYVMFIGVLTACNHAGMVDLG--FYYFMLMTNVYRISPSKE-----HYGCLI 571
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
D+ + G + +A+ + M D W+ ++
Sbjct: 572 DLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLL 603
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 334/617 (54%), Gaps = 43/617 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYALFVFNNLSCE 96
L L T++ K +EIH+ M+ TG+I +++ L+ S+ + Y + NN +
Sbjct: 58 LSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNN-AAN 116
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
N F++N I G+ ++ + + N +R+ +PD YT+P L K C +
Sbjct: 117 LNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I G V +LG D D+++ +A+++ + C + A K+F+E +RD+V WN+++NGY + G
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A +++ +M + + T+ GV+SA + GR +H + +MG + VP+ NA
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-------- 327
L+DMY K K + A +FE M +K + SW +++ + + G + +RLF+ M
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 328 --LSAGF---------------------QPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
L GF PD +T L ACS L AL G +H Y+
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ L N V + AL+DMY KCG+++ A VF +M ++ +W +I G + G
Sbjct: 417 HNLTMN--------VALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHG 468
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
Q A+ FS M L PDE+TF+GVLSAC H G + QGR++ M S+YG+ P ++HY
Sbjct: 469 QPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHY 528
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
+C++D+LGRAG L EA EL +MP E + VVW L SR+HGN + E AA ++ +L+P
Sbjct: 529 SCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDP 588
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
G YVL++N+Y +E+ +R M ++ V K PGCS IE+ ++ FI D+SHP
Sbjct: 589 HDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHP 648
Query: 605 EAKSIYAELHSLTARLR 621
+++ IY L LT ++
Sbjct: 649 QSEKIYECLTRLTRQIE 665
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L G +H Y+ + + + T+L++MY+KC +K A+ VF +
Sbjct: 390 TVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
N T+ A+I G + + +F+ M +G++PD+ TF ++ CC V +
Sbjct: 450 PGR-NSLTWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQG 508
Query: 154 KK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYA 211
+ + + K G+ + S LV+ + F+EEA ++ +P D V+W A+ G
Sbjct: 509 RDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSR 568
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G H MG R ++ +D G+
Sbjct: 569 IHGNVH------------------------------MG----ERAASKLLELDPHDGGIY 594
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
V+ L +MYG +A ++ +MMEE+ +
Sbjct: 595 VL--LANMYGDANMWEQARKVRKMMEERGV 622
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 336/590 (56%), Gaps = 12/590 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +L+ CA L+ G+ IH + + I S + + ++L+ +YSKC QM AL VF
Sbjct: 105 TIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE 164
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVL 151
P+ + +M++G+ N+ + L F+ M + V+ D T ++ C ++ V
Sbjct: 165 FQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVK 223
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+HGLV + D D+ + ++L+N Y K + A +F ++P +DV+ W+ M+ YA
Sbjct: 224 AGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYA 283
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
++AL +F M ++ + TV L A + + G+ +H I V G++
Sbjct: 284 NNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFS 343
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V ALIDMY K C EA+++F+ + +KD+ SW ++++ + Q G ++ +F MLS G
Sbjct: 344 VSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDG 403
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
QPD V +L A S L +HGY+V +G N VF+ +L+++Y+K
Sbjct: 404 IQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN--------VFVGASLIELYSK 455
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVG 450
CGS+ DA +F M +DV W+ MI YG+ G+G EAL++F M + + ++P+ VTF+
Sbjct: 456 CGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLS 515
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACSH+G + +G + M Y + P EH+ ++D+LGR GQL +A ++ MP
Sbjct: 516 ILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIP 575
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A P VW LL A R+H N ++ E AA+ +F L+P H G Y+L+SNIY GK++ V ++R
Sbjct: 576 AGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELR 635
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++++ ++K G S +E++ G+H+F++SDR HP+++ IY L L A++
Sbjct: 636 TRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEAQM 685
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/472 (36%), Positives = 269/472 (56%), Gaps = 8/472 (1%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+KK H +F GL D I + Y+ ++ A VFE++P LWN M+ G+A
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G F +LE++ +M ++G+ +F L + + + G+V+H +V G + + V
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+DMY K + A +F+ M +D+ SW S+++ + G + TL FD M S+G
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ V+ +VL AC +L AL G H Y++ G D+ + A+MDMY+KC
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEF--------DILVATAIMDMYSKC 967
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ A+ +F + + KD+ W+ MI YG+ G G++A+D+F M +A ++P VTF VL
Sbjct: 968 GSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVL 1027
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSHSG L +G+ + LM + + + +Y C++D+LGRAGQL+EA +L MP E +
Sbjct: 1028 SACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPD 1087
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W +LL A R+H N DLAE A +F L+P H G +VL+SNIY A ++ EV +R
Sbjct: 1088 ASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKM 1147
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M ++ K G S +E + +H F DRSHP+ + +YA+L L A ++ G
Sbjct: 1148 MARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLG 1199
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 246/485 (50%), Gaps = 14/485 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
N + ++HS + +TGI+ T L ++Y+KC ++ A VF+ + PNV +N+
Sbjct: 15 NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE-TPHPNVHLWNST 73
Query: 106 ISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+ + + L F+ M G PD +T P +K C + + K IHG K
Sbjct: 74 LRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKND 133
Query: 165 -LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
+ D+++GSALV Y KC M EALKVFEE D VLW +MV GY Q + +AL +F
Sbjct: 134 EIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALF 193
Query: 224 RRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
+M + + + T+ V+SA + K G VHG+V++ +D +P++N+L+++Y K
Sbjct: 194 SQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAK 253
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
C A +F M EKD+ SW++++ + + L LF M+ F+P+ VT +
Sbjct: 254 TGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSA 313
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ L G++IH V G D ++ AL+DMY KC +A +F
Sbjct: 314 LQACAVSRNLEEGKKIHKIAVWKGFEL--------DFSVSTALIDMYMKCSCPDEAVDLF 365
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
++ KKDV SW ++ GY +G +++ +F M ++PD V V +L+A S G
Sbjct: 366 QRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 425
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
Q L R G + +I++ + G L +A +L M + V+W +++AA
Sbjct: 426 QAL-CLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAA 483
Query: 523 SRLHG 527
+HG
Sbjct: 484 YGIHG 488
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 159/305 (52%), Gaps = 1/305 (0%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++ H+ + G+ +T MY ++ A VF ++ P F +N MI GF +
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIP-NPCSFLWNVMIRGFAT 795
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ L+ ++ M + G+ PDK+ FP +K C + + K IH + G D+++
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV+ Y KC +E A VF+++ +RD+V W +M++GYA G + L F M G+
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+R ++ VL A +G + G H V++ G++ + V A++DMY K + A
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ KD+ W++++ + G+ + LFD+M+ AG +P VTF+ VL ACSH
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 352 LMHGR 356
L G+
Sbjct: 1036 LEEGK 1040
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 160/305 (52%), Gaps = 10/305 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L +C A ++LQ+G+ IH +++ G + +L++MY+KC ++
Sbjct: 819 FAFPFALKSC-------AGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEA 871
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ ++ ++ ++ +MISG+ N + + L FF+ MR GV+P++ + ++ C
Sbjct: 872 ARLVFDKMAVR-DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACG 930
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
++ A+ + + H V + G + D+ + +A+++ Y KC ++ A +F+E +D+V W+A
Sbjct: 931 NLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSA 990
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KM 264
M+ Y G KA+++F +M K G+ S T T VLSA G + G++ ++ +
Sbjct: 991 MIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEF 1050
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRL 323
+ ++D+ G+ + EA+++ E M E D W S++ N D ++
Sbjct: 1051 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKI 1110
Query: 324 FDRML 328
D +
Sbjct: 1111 ADHLF 1115
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 139/298 (46%), Gaps = 16/298 (5%)
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
S++ G + F + H + G ++ MY + A +F
Sbjct: 716 SKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVF 775
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
E + F WN ++ G +L L+ +M+ G +PD F L +C+ L+ L
Sbjct: 776 EDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQ 835
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+ IH ++V G + +D+F++ AL+DMY KCG + A++VF KM+ +D+ SW
Sbjct: 836 RGKVIHQHLVCCGCS--------NDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSW 887
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI GY +G E L F M + + P+ V+ + VL AC + G L +G F +
Sbjct: 888 TSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV-I 946
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA---NPVVWRTLLAASRLHGN 528
+ G I T ++DM + G L +LA + +E + V W ++A+ +HG+
Sbjct: 947 QTGFEFDILVATAIMDMYSKCGSL----DLARCLFDETAGKDLVCWSAMIASYGIHGH 1000
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/660 (33%), Positives = 338/660 (51%), Gaps = 62/660 (9%)
Query: 12 SSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT 71
S C S S + PF + C ++++ G H+ TG + +
Sbjct: 114 SFCLMHSLSWTPDNYTFPFVF-------KACGEISSVRCGDSSHALSRVTGFMSNVFVGN 166
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGV 130
+L+ MYS+C + A VF+ + +V ++N++I + L+ F+ M + G
Sbjct: 167 ALVAMYSRCGSLSDARKVFDEMPVW-DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGF 225
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
PD T ++ C V K+ HG + ++++G+ LV+ Y K M+EA
Sbjct: 226 RPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANT 285
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM----------------- 233
VF +P++DVV WNAMV GY+QIG F A+ +F +M +E I M
Sbjct: 286 VFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 234 ------------------SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-------GYDS 268
+ T+ VLS +G +G+ +H +K G+
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGD 405
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
V+N LIDMY K K V A +F+ + +E+D+ +W ++ + Q G+ + L L
Sbjct: 406 ENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 327 MLSAGFQ--PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M Q P+ T S L AC+ LAAL G+QIH Y + N ++ +F++N
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQ-------QNAVPLFVSNC 518
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY KCG + DA++VF M +K+ +W ++ GYGM G G+EAL +F M K D
Sbjct: 519 LIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLD 578
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VT + VL ACSHSG + QG E+ M++ +GV P EHY C++D+LGRAG+LN A L
Sbjct: 579 GVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLI 638
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP E PVVW LL+ R+HG +L E AA+++ +L + G+Y L+SN+Y G+++
Sbjct: 639 EEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWK 698
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V IR MR + ++K PGCSW+E G TF D++HP AK IY L R+++ G
Sbjct: 699 DVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIG 758
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 254/519 (48%), Gaps = 52/519 (10%)
Query: 54 IHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYS 111
IH +L GI+ L++TS LI+ Y + +A+ + + V+ +N++I + +
Sbjct: 47 IHQKLLSFGILT--LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGN 104
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A K L F M L PD YTFP + K C ++ +V H L G +V++
Sbjct: 105 NGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFV 164
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-G 230
G+ALV Y +C + +A KVF+E+P+ DVV WN+++ YA++G+ ALE+F +M+ E G
Sbjct: 165 GNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFG 224
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
T+ VL +G G+ HG V + V N L+DMY K + EA
Sbjct: 225 FRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEAN 284
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------------------------- 325
+F M KD+ SWN+++ + Q G + +RLF+
Sbjct: 285 TVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 326 ----------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSC 373
+MLS+G +P+ VT +VL C+ + ALMHG++IH Y + L KNG
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHG 404
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEALD 431
D+ + N L+DMY KC + A+ +F +S K DV +W +MI GY G +AL+
Sbjct: 405 ---DENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 432 MFSCMCEA--KLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVI 488
+ S M E + +P+ T L AC+ LS G++ + ++ VP C+I
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS-NCLI 520
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
DM + G + +A L E N V W +L+ +HG
Sbjct: 521 DMYAKCGDIGDA-RLVFDNMMEKNEVTWTSLMTGYGMHG 558
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 325/593 (54%), Gaps = 16/593 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L CI L CA + G H Y+++ G +LI+ Y+K + A+ VF+
Sbjct: 416 LLKCITCLS-CA-----RDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFD 469
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++N++ISG SN + ++ F M G D T ++ C
Sbjct: 470 RMP-HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWF 528
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +HG K GL + + +AL++ Y C ++F + ++VV W AM+ Y
Sbjct: 529 VGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYT 588
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G F K + + M +GI F VT VL K G+ VHG ++ G + +P
Sbjct: 589 RAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLP 648
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NAL++MY + + EA +F+ + KDI SWN+++ + + + + LF ML
Sbjct: 649 VANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQ 707
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F+P+ VT + +LPA + +++L GR+IH Y + G ++D + +NAL+DMY K
Sbjct: 708 FKPNTVTMTCILPAVASISSLERGREIHAYALRRGF--------LEDSYTSNALVDMYVK 759
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ A+++F +++KK++ SW IMI GYGM G GK+A+ +F M + ++PD +F +
Sbjct: 760 CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAI 819
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC HSG ++G +F M Y + P ++HYTC++D+L G L EA+E +MP E
Sbjct: 820 LYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEP 879
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W +LL R+H + LAE A RVF+LEP + G YVL++NIY ++E V +++
Sbjct: 880 DSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKN 939
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + +R+N GCSWIE++ +H FI+ +R+HPE I L + R+RE G
Sbjct: 940 KIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEG 992
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 248/503 (49%), Gaps = 20/503 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS---------LINMYSKCCQMK 84
T ++ L CA G+ +H Y +++G++ S+ S L+ MY KC M
Sbjct: 301 TVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMG 360
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF+ + + NV +N ++ G+ + L F M +LG+ PD++ CL+KC
Sbjct: 361 SARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCI 420
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ + HG + KLG + +AL++ Y K ++ A+ VF+ +P +D + WN
Sbjct: 421 TCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWN 480
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++++G G +A+E+F RM +G + T+ VL A ++ GRVVHG VK
Sbjct: 481 SVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKT 540
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G + NAL+DMY +IF M +K++ SW +++T + + G D L
Sbjct: 541 GLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLL 600
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M+ G +PD+ ++VL + +L G+ +HGY + NG+ K + + NA
Sbjct: 601 QEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKL--------LPVANA 652
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
LM+MY C +M +A++VF ++ KD+ SWN +I GY + E+ +FS M + KP+
Sbjct: 653 LMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPN 711
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VT +L A + L +GRE + R G + ++DM + G L A L
Sbjct: 712 TVTMTCILPAVASISSLERGRE-IHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVL- 769
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
+ N + W ++A +HG
Sbjct: 770 FDRLTKKNLISWTIMIAGYGMHG 792
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 246/501 (49%), Gaps = 28/501 (5%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTG---IIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
A +QLC + +L+ + H+ ++R G II S L L+ Y KC + A VF+ +
Sbjct: 99 AVVQLCGEERSLEAARRAHA-LVRAGTGGIIGSVLG-KRLVLAYLKCGDLGGARMVFDEM 156
Query: 94 SCE-PNVFTYNAMISGFY-SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+V + +++S + + DF +G+ F M+ GV PD + C++KC + ++
Sbjct: 157 PPRVADVRVWTSLMSAYAKAGDFQ-EGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E + IHGL+ KLGL + +AL+ Y +C ME+A++VF+ + RD + WN+ ++GY
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG------ 265
G +A+++F +M EG +S TV VL A +GF G+VVHG +K G
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 266 -YDSGV--PVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTL 321
SG+ + + L+ MY K +G A +F+ M K ++ WN IM + + + +L
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF++M G PD S +L + L+ G HGY+V G + +
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCA--------V 447
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NAL+ Y K + +A +VF +M +D SWN +I G +G EA+++F M
Sbjct: 448 CNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGH 507
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
+ D T + VL AC+ S + GR + + G++ ++DM +
Sbjct: 508 ELDSTTLLSVLPACARSHYWFVGR-VVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTN 566
Query: 502 ELALAMPNEANPVVWRTLLAA 522
++ M + N V W ++ +
Sbjct: 567 QIFRNMA-QKNVVSWTAMITS 586
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 184/339 (54%), Gaps = 10/339 (2%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
++ +++ C + ++ ++ H LV G + +G LV YLKC + A VF+E
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155
Query: 195 LPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+P R DV +W ++++ YA+ G+F + + +FR+M G+ V+ VL + +G
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSIT 215
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G V+HG++ K+G V NALI +Y + C+ +A+++F+ M +D SWNS ++ +
Sbjct: 216 EGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYF 275
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN-G 371
G HD + LF +M S G + VT +VLPAC+ L + G+ +HGY + +GL +
Sbjct: 276 SNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEAL 430
S + D + + L+ MY KCG M A+ VF M SK +V WN+++ GY + +E+L
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 431 DMFSCMCEAKLKPDEVTFVGVLS-----ACSHSGFLSQG 464
+F M E + PDE +L +C+ G ++ G
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG 434
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 186/393 (47%), Gaps = 10/393 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H T ++ L CA G+ +H Y ++TG+I +L++MYS C
Sbjct: 507 HELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTN 566
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F N++ + NV ++ AMI+ + K M G+ PD + ++
Sbjct: 567 QIFRNMA-QKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGD 625
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
++ + K +HG + G++ + + +AL+ Y+ C+ MEEA VF+ + +D++ WN ++
Sbjct: 626 ESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLI 685
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY++ +++ +F M + + T+T +L A+ + + GR +H ++ G+
Sbjct: 686 GGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFL 744
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
NAL+DMY K + A +F+ + +K++ SW ++ + G + LF++M
Sbjct: 745 EDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQM 804
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +PD +FS +L AC H G G+ N + K K + ++D
Sbjct: 805 RGSGVEPDTASFSAILYACCH-----SGLTAEGWKFFNAMRKE--YKIEPKLKHYTCIVD 857
Query: 388 MYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+ + G++++A M + D + W ++ G
Sbjct: 858 LLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/571 (35%), Positives = 331/571 (57%), Gaps = 10/571 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH+ ++++G + + +SL+ MY+K + ++ VF+ + E +V ++N +IS FY
Sbjct: 125 GRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP-ERDVASWNTVISSFY 183
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
A K L+ F M + P+ + I C ++ + K+IH K +LD Y
Sbjct: 184 QRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEY 243
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ SALV+ Y +C F+E A +VF+++ + +V WN+M+ GY G+ +E+ RM EG
Sbjct: 244 VNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEG 303
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S+ T+T +L A +G+ VHG V++ D+ + + +LID+Y K V A
Sbjct: 304 TRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAE 363
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F ++ + SWN +++ + GN + ++D+M+S G QPD+VTF++VL CS LA
Sbjct: 364 TVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLA 423
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH L+ + S + D++ + +AL+DMY+KCG++++A +F + KKDV
Sbjct: 424 ALEKGKQIH-------LSISESRLETDELLL-SALLDMYSKCGNVKEASRIFNSIPKKDV 475
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW +MI YG GQ +EAL F M + +KPD VTF+ VLSAC H+G + +G ++
Sbjct: 476 VSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQ 535
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNT 529
M S+YG+ +IE Y+C+ID+LGRAG+L EAY + P N + TL A LH +
Sbjct: 536 MRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDH 595
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
L A+ + + P Y ++ N+Y +G ++ +R M++ +RK PGCSWIE+
Sbjct: 596 LLGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEM 655
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+ + F + DRSHP+A+++Y L L+ +
Sbjct: 656 NEKVCHFFAEDRSHPQAENVYECLALLSGHM 686
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/492 (30%), Positives = 264/492 (53%), Gaps = 13/492 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + +L++ + +H +L G+ + SLIN+Y C A VF N+ +
Sbjct: 10 LRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRSD 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V+ +N+++SG+ N L F + + +PD +T+P +IK + + IH
Sbjct: 70 VYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+V K G DV + S+LV Y K E++++VF+E+P RDV WN +++ + Q G+
Sbjct: 130 TVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAE 189
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KALE+F RM + + ++T +SA + + G+ +H +K ++ V +AL+
Sbjct: 190 KALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALV 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMYG+ + A E+F+ M K + +WNS++ + G+ + L +RM+ G +P
Sbjct: 250 DMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQT 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +++L ACS L+HG+ +HGY++ + + D+++N +L+D+Y KCG ++
Sbjct: 310 TLTSILMACSRSRNLLHGKFVHGYVIRSVVDA--------DIYINCSLIDLYFKCGEVKL 361
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF K K V SWN+MI GY G +A+D++ M ++PD VTF VLS CS
Sbjct: 362 AETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQ 421
Query: 458 SGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L +G++ L + ESR + + ++DM + G + EA + ++P + + V W
Sbjct: 422 LAALEKGKQIHLSISESRLETDELL--LSALLDMYSKCGNVKEASRIFNSIPKK-DVVSW 478
Query: 517 RTLLAASRLHGN 528
+++A HG
Sbjct: 479 TVMISAYGSHGQ 490
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 184/328 (56%), Gaps = 10/328 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR- 198
L++ C + ++ + K +H + +GL DV + +L+N Y C+ A VFE + +R
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIRS 68
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVV 257
DV +WN++V+GY++ FH L+VF+R+ I + FT V+ A +G GR++
Sbjct: 69 DVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMI 128
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +VVK G+ V V ++L+ MY K +++++F+ M E+D+ SWN++++ Q G+
Sbjct: 129 HTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDA 188
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L LF RM + F+P+ V+ + + ACS L L G++IH + ++D
Sbjct: 189 EKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEF-------ELD 241
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ ++N+AL+DMY +C + A+ VF +M +K + +WN MI GY G K +++ + M
Sbjct: 242 E-YVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMI 300
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+P + T +L ACS S L G+
Sbjct: 301 IEGTRPSQTTLTSILMACSRSRNLLHGK 328
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C+ L+KG++IH + + + L +++L++MYSKC +K A +FN
Sbjct: 409 IVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFN 468
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + +V ++ MIS + S+ + L F+ M++ GV PD TF ++ C +
Sbjct: 469 SIP-KKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLID 527
Query: 152 E-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
E VK + K G++ + S L++ + + EA + ++ P
Sbjct: 528 EGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKP 573
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 291/508 (57%), Gaps = 27/508 (5%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK--CQFM-------- 185
+ P +K C + +H L + G D + +AL+N Y K C ++
Sbjct: 52 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIV 111
Query: 186 ---------EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
E KVF+E+ RDVV WN +V G A+ G H+AL R+M +EG F
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T++ VL K G VHG + G+DS V V ++LIDMY ++++F+ +
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNL 231
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D WNS++ Q G+ + L +F RML AG +P VTFS+++P C +LA+L G+
Sbjct: 232 PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGK 291
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H Y++ G D+VF++++L+DMY KCG + A +F KMS DV SW M
Sbjct: 292 QLHAYVICGGFE--------DNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAM 343
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I+GY + G +EAL +F M KP+ +TF+ VL+ACSH+G + +G ++ M + YG
Sbjct: 344 IMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYG 403
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
+VPT+EH+ + D LGRAG+L+EAY M + VW TLL A R+H NT LAE A
Sbjct: 404 IVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVA 463
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+++ +LEP G++V++SN+Y A G++ E +R +MR++ ++K+P CSWIE+K LH F
Sbjct: 464 KKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSWIEVKSKLHVF 523
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
++ DRSHP I L++ + ++ G
Sbjct: 524 VAHDRSHPWYDRIIDALNAFSEQMAREG 551
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 192/408 (47%), Gaps = 34/408 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC------------ 80
A+ A+L+ CA G +H+ +R+G + +L+N+Y K
Sbjct: 51 ASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAI 110
Query: 81 -------CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ VF+ + E +V ++N ++ G + L F M + G PD
Sbjct: 111 VDVPGSSTAFESVRKVFDEM-IERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPD 169
Query: 134 KYTFPCLIKC---CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
+T ++ C DV LEV HG F+ G D DV++GS+L++ Y C + ++K
Sbjct: 170 SFTLSTVLPIFAECADVKRGLEV---HGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVK 226
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ LP+RD +LWN+++ G AQ G +AL +FRRM + G+ T + ++ +
Sbjct: 227 VFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLAS 286
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G+ +H V+ G++ V + ++LIDMY K + A IF+ M D+ SW +++
Sbjct: 287 LRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMG 346
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ G L LF+RM +P+ +TF VL ACSH G G+ ++ +
Sbjct: 347 YALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHA-----GLVDKGWKYFKSMSNH 401
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
+ F AL D + G + +A +KM K AS W+ ++
Sbjct: 402 YGIVPTLEHFA--ALADTLGRAGELDEAYNFISKMQIKPTASVWSTLL 447
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 208/578 (35%), Positives = 325/578 (56%), Gaps = 12/578 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++HS +++ G ++ + ++L++MY+KC +++ A F ++S + N ++NAMI+G+
Sbjct: 118 GQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSIS-KHNTVSWNAMINGYA 176
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ M Q G D T+ L+ D ++HG + K GL+L
Sbjct: 177 QAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236
Query: 171 IGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +AL+ +Y KC +++A ++F+ +RD+V WN+++ Y + A ++ M +
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH 296
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK--CVG 287
G ++ T ++SA NGR +HG+V+K G++ VP+ NALI MY K +
Sbjct: 297 GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMK 356
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
EAL IFE +E KD SWNSI+T Q G+ + ++ F M SA D +FS VL +CS
Sbjct: 357 EALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS 416
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
LA G+QIH + GL N F++++L+ MY+KCG + DA+ F + SK
Sbjct: 417 DLATFQLGQQIHVLALKYGLESNE--------FVSSSLIFMYSKCGIIEDARRSFEEASK 468
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+WN ++ GY GQ ALD+F M E K+K D +TFV VL+ACSH G + QG +F
Sbjct: 469 NSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKF 528
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L MES YGV P +EHY C +D+ GR+G+L EA L MP + + VW+T L A R G
Sbjct: 529 LRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N +LA A + ++EP YVL+SN+Y +++E ++ M+++ V+K PG SWI
Sbjct: 589 NIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWI 648
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
E+ + +H FI+ D SHP + IY L L + D
Sbjct: 649 EVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITRMED 686
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 235/481 (48%), Gaps = 14/481 (2%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
HS ++ G I + +++N Y KC +++ A +F+ + +V ++N MI+G +
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSV-SWNTMIAGHINCGN 79
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
D MR G D+YTF ++K +++H ++ K+G +VY GSA
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC+ +E+A F + + V WNAM+NGYAQ G+ A + M +EG +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T +L L F +HG ++K G + + NALI Y K + +A IF+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 295 MMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+D+ +WNS++ + D +L M GF+PDL ++++++ AC +
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC--GSMRDAQMVFTKMSKKDVA 411
+GR +HG ++ G ++ V ++NAL+ MY K GSM++A +F + KD
Sbjct: 320 NGRSLHGLVIKRGFEQS--------VPISNALISMYLKSDYGSMKEALCIFESLEFKDRV 371
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN ++ G G ++A+ F M A + D +F VL +CS G++ + ++
Sbjct: 372 SWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQ-IHVL 430
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+YG+ + +I M + G + +A + ++ + + W L+ HG ++
Sbjct: 431 ALKYGLESNEFVSSSLIFMYSKCGIIEDARR-SFEEASKNSSITWNALMFGYAQHGQCNV 489
Query: 532 A 532
A
Sbjct: 490 A 490
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ Q GQ+IH L+ G+ + +SLI MYSKC ++ A F S
Sbjct: 410 AVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKN 469
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKK 155
++ T+NA++ G+ + LD F M + V D TF ++ C + V + K
Sbjct: 470 SSI-TWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKF 528
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIG 214
+ + G+ + + V+ Y + +EEA + EE+P + D +W + G
Sbjct: 529 LRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Query: 215 EFHKALEV 222
A +V
Sbjct: 589 NIELACQV 596
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 324/593 (54%), Gaps = 24/593 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++Q C ++ G+ +H+ ++ G TSL+ MY+K ++ + VFN+L
Sbjct: 169 AAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLE-N 227
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++NAMISGF SN + + F M + P+ F + K + V + + I
Sbjct: 228 RNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYI 287
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--------LPLRDVVLWNAMVN 208
+ + F++G+ ++++G+AL++ + KC + E+ VF LP WNAM++
Sbjct: 288 NRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLP------WNAMIS 341
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ G +A+ +F RM + I +T L+++ M + + +HG++ K G
Sbjct: 342 GFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SI 400
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
GV + NAL+D Y K + ++F+ EE + SW +++T + Q + L +F +M
Sbjct: 401 GVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMR 460
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
GFQP+ VTFS VL +C+ L +L +G+Q+H G A+ D + + L+DM
Sbjct: 461 EMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFAR--------DKCVESVLIDM 512
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+RDA VF + DV SW MI GY G K+AL++F M P+ TF
Sbjct: 513 YAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATF 572
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ +L ACSH G + +G + LME RYG+VP IEHY CV+D+LGR G+L EA++ + MP
Sbjct: 573 LCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMP 632
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E + VW TLL A R+HGN LA+IAAQ+V P VL+SN Y G E L+
Sbjct: 633 IEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLN 692
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+R+ M+ Q +RK G SWI + +H F S D+ HP+ IY L+ L +++
Sbjct: 693 VRNMMKSQAMRKETGMSWICIGGKIHKFCSGDQYHPQKDDIYKTLNVLMEKVQ 745
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 143/561 (25%), Positives = 273/561 (48%), Gaps = 29/561 (5%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--TSLINMYSKCCQMK 84
N ++ + I ++ A + L+K + IH ++++ +I+ L++ L+ YSKC
Sbjct: 56 NCCYSETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFG 115
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF+ + + +VF++ ++ G N F G+D+F + ++PD+Y I+ C
Sbjct: 116 SARQVFDEIP-QKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQAC 174
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
V +++ + +H V G ++ ++L+ Y K + ++ KVF L R+ V WN
Sbjct: 175 IGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWN 234
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM++G+ G + +A F RM E I + V A+ +G + GR ++ I ++
Sbjct: 235 AMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEI 294
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-------WNSIMTVHEQCGNH 317
G S + V ALIDM+ K CV E+ +F FS WN++++ G+
Sbjct: 295 GMQSNIHVGTALIDMFAKCGCVTESWSVF-----VSNFSGCGVNLPWNAMISGFTISGHG 349
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ + LF RM + D+ T+ + L + + + +L + +Q+HG I K+GS
Sbjct: 350 EEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMI-----WKSGSI---- 400
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
V + NALMD Y KCG + + +F + + SW ++ Y + ++AL +FS M
Sbjct: 401 GVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMR 460
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQ 496
E +P++VTF GVL++C+ L G++ L ++ + +E + +IDM + G
Sbjct: 461 EMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVE--SVLIDMYAKCGS 518
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ +A ++ ++ + + + W +++ HG D E+ + L + ++ +
Sbjct: 519 VRDAIKVFESL-KDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLF 577
Query: 556 IYVAGGKYEEVLDIRHTMRQQ 576
GG +E L H M ++
Sbjct: 578 ACSHGGLVDEGLRYFHLMEER 598
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 328/598 (54%), Gaps = 12/598 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + + G+E+H+++LR G D + +L+ MY+KC + A VF+ ++ +
Sbjct: 204 LRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT-D 262
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F M + V P+ T + + V K++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G +DV ++L+ Y M +A K+F + +D + W AM++GY + G K
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + T+ L+A +G G +H + G+ V V NAL++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD-RMLSAGFQPDLV 337
MY K K + +A+E+F+ M EKD+ SW+S++ C NH L+ R + +P+ V
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGF--CFNHRSFEALYYFRYMLGHVKPNSV 500
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF L AC+ AL G++IH Y++ G+ G ++ NAL+D+Y KCG
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEG--------YVPNALLDLYVKCGQTSY 552
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F+ S+KDV SWNIM+ G+ G G AL +F+ M E PDEVTFV +L ACS
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + QG E +M ++ +VP ++HY C++D+L R G+L EAY L MP + + VW
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL R+H + +L E+AA+ + +LEP +VL+ ++Y GK+ +V +R TMR++
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
+ ++ GCSW+E+K H F++ D SHP+ K I LH + R++ G +L D +
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKE 790
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 253/509 (49%), Gaps = 36/509 (7%)
Query: 36 IASLQLCAHQTNLQKG--------QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+A +LC + + G E S+ LR G ++++M + ++ +A
Sbjct: 100 VALFRLCEWRRAVDAGMRACARADAEHPSFGLRLG--------NAMLSMLVRFGEIWHAW 151
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + E +VF++N M+ G+ F + LD + M G+ PD YTFPC+++ C +
Sbjct: 152 RVFAKMP-ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGI 210
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++H V + G +V + +ALV Y KC + A KVF+ + + D + WNAM+
Sbjct: 211 PDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMI 270
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+ + E LE+F M + + + T+T V A M+ + +HG VK G+
Sbjct: 271 AGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFA 330
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V N+LI MY +G+A +IF ME KD SW ++++ +E+ G D L ++ M
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
PD VT ++ L AC+ L L G ++H LA+N I V + NAL++
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLH------ELAQNKGF--IRYVVVANALLE 442
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K + A VF M++KDV SW+ MI G+ + + EAL F M +KP+ VT
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVT 501
Query: 448 FVGVLSACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
F+ LSAC+ +G L G+E L G VP ++D+ + GQ + A+
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWA- 555
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ +E + V W +L+ HG D+A
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIA 584
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 8/190 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T IA+L CA L+ G+EIH+Y+LR GI +L+++Y KC Q YA F ++
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SV 559
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++N M+SGF ++ L FN M ++G PD+ TF L+ C V++
Sbjct: 560 HSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQG 619
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG-- 209
++ H + K + ++ + +V+ + + EA + +P++ D +W A++NG
Sbjct: 620 WELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCR 679
Query: 210 ---YAQIGEF 216
+ ++GE
Sbjct: 680 IHRHVELGEL 689
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/594 (34%), Positives = 330/594 (55%), Gaps = 28/594 (4%)
Query: 49 QKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
++ +++H+++++T G + S + + Q ++L +FN+L P ++++I
Sbjct: 26 RQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNLLQ--HSLHLFNSLPSPPPPLAWSSIIK 83
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ S+ FN MR L V P+++ FP L+K + +H +LGLD
Sbjct: 84 CYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDS 143
Query: 168 DVYIGSALVNTYLKCQFMEEAL---------------KVFEELPLRDVVLWNAMVNGYAQ 212
D+YI +AL+NTY K + KVF+ +P+RDVV WN ++ G+AQ
Sbjct: 144 DLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQ 203
Query: 213 IGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G + +AL++ R M K G + FT++ +L G+ +HG V+ G+D V
Sbjct: 204 NGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVF 263
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ ++LIDMY K + +L F ++ KD SWNSI+ Q G D L F RML
Sbjct: 264 IGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKEN 323
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P V+FS+V+PAC+HL AL GRQ+HG IV G D+ F+ ++L+DMY K
Sbjct: 324 VKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFD--------DNEFIASSLVDMYAK 375
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG+++ A+ VF ++ K+D+ +W +I+G M G +A+ +F M E ++P V F+ V
Sbjct: 376 CGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAV 435
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN-E 510
L+ACSH+G + +G + ME +G+ P +EHY V D+LGRAG+L EAY+ M +
Sbjct: 436 LTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQ 495
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
VW LLAA R H + +LAE ++ ++ + G YVLMSNIY A ++++ +R
Sbjct: 496 PTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLR 555
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR++ ++K P CSWIE+ + +HTF++ D+SHP I L L ++ + G
Sbjct: 556 IHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEG 609
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L + A ++ KG+EIH Y +R G +SLI+MY+KC +++ +L
Sbjct: 228 FTLSSI---LPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRA 284
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L + ++N++I+G N +GL FF M + V P +F +I C + A
Sbjct: 285 FYILP-RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTA 343
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +++HG + +LG D + +I S+LV+ Y KC ++ A VF+ + RD+V W A++ G
Sbjct: 344 LSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMG 403
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
A G A+ +F M ++G+ VL+A G G R + + G
Sbjct: 404 CAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAP 463
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME 297
G+ A+ D+ G+ + EA + M
Sbjct: 464 GLEHYAAVADLLGRAGRLEEAYDFISNMR 492
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/598 (34%), Positives = 328/598 (54%), Gaps = 12/598 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + + G+E+H+++LR G D + +L+ MY+KC + A VF+ ++ +
Sbjct: 204 LRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVT-D 262
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F M + V P+ T + + V K++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G +DV ++L+ Y M +A K+F + +D + W AM++GY + G K
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + T+ L+A +G G +H + G+ V V NAL++
Sbjct: 383 ALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD-RMLSAGFQPDLV 337
MY K K + +A+E+F+ M EKD+ SW+S++ C NH L+ R + +P+ V
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGF--CFNHRSFEALYYFRYMLGHVKPNSV 500
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF L AC+ AL G++IH Y++ G+ G ++ NAL+D+Y KCG
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEG--------YVPNALLDLYVKCGQTSY 552
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F+ S+KDV SWNIM+ G+ G G AL +F+ M E PDEVTFV +L ACS
Sbjct: 553 AWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + QG E +M ++ +VP ++HY C++D+L R G+L EAY L MP + + VW
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL R+H + +L E+AA+ + +LEP +VL+ ++Y GK+ +V +R TMR++
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
+ ++ GCSW+E+K H F++ D SHP+ K I LH + R++ G +L D +
Sbjct: 733 LEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKE 790
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 253/509 (49%), Gaps = 36/509 (7%)
Query: 36 IASLQLCAHQTNLQKG--------QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+A +LC + + G E S+ LR G ++++M + ++ +A
Sbjct: 100 VALFRLCEWRRAVDAGMRACARADAEHPSFGLRLG--------NAMLSMLVRFGEIWHAW 151
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + E +VF++N M+ G+ F + LD + M G+ PD YTFPC+++ C +
Sbjct: 152 RVFAKMP-ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGI 210
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++H V + G +V + +ALV Y KC + A KVF+ + + D + WNAM+
Sbjct: 211 PDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMI 270
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+ + E LE+F M + + + T+T V A M+ + +HG VK G+
Sbjct: 271 AGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFA 330
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V N+LI MY +G+A +IF ME KD SW ++++ +E+ G D L ++ M
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
PD VT ++ L AC+ L L G ++H LA+N I V + NAL++
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLH------ELAQNKGF--IRYVVVANALLE 442
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K + A VF M++KDV SW+ MI G+ + + EAL F M +KP+ VT
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-GHVKPNSVT 501
Query: 448 FVGVLSACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
F+ LSAC+ +G L G+E L G VP ++D+ + GQ + A+
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWA- 555
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ +E + V W +L+ HG D+A
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIA 584
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 8/190 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T IA+L CA L+ G+EIH+Y+LR GI +L+++Y KC Q YA F ++
Sbjct: 501 TFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQF-SV 559
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++N M+SGF ++ L FN M ++G PD+ TF L+ C V++
Sbjct: 560 HSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQG 619
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG-- 209
++ H + K + ++ + +V+ + + EA + +P++ D +W A++NG
Sbjct: 620 WELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCR 679
Query: 210 ---YAQIGEF 216
+ ++GE
Sbjct: 680 IHRHVELGEL 689
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 350/597 (58%), Gaps = 18/597 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T++T IA+L ++ + G ++H+ +++ G ++ SLI++YS+ ++ A V
Sbjct: 195 YTVSTVIAAL---VNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + V T+N+MI+G+ N + + FN M+ GV P TF +IK C +
Sbjct: 252 FDKMEIRDWV-TWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVN 208
+ VK + K G D + +AL+ KC+ M++AL +F + ++VV W AM++
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G Q G +A+ +F +M +EG+ + FT + +L+ + F + +H V+K Y+
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT--VHYPVFVSE--MHAEVIKTNYER 426
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V AL+D Y K +A+++FE++E KD+ +W++++ + Q G + +LF +++
Sbjct: 427 SSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLI 486
Query: 329 SAGFQPDLVTFSTVLPAC-SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +P+ TFS+V+ AC S AA G+Q H Y + L N C +++AL+
Sbjct: 487 KEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRL-NNALC-------VSSALVT 538
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G++ A VF + ++D+ SWN MI GY GQ K+AL++F M + + D VT
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GV++AC+H+G + +G+++ M + + + PT++HY+C+ID+ RAG L +A + M
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P VWRTLL A+R+H N +L E+AA+++ L+P YVL+SN+Y A G ++E
Sbjct: 659 PFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERT 718
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++R M ++ V+K PG SWIE+K+ ++F++ D +HP + IY++L L+ RL++ G
Sbjct: 719 NVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAG 775
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 254/505 (50%), Gaps = 27/505 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ +CA + + G+++H ++ G++D TSL++MY K + VF+ +
Sbjct: 97 SCV--FNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM 154
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++ ++++G+ N + F M+ GVLP++YT +I + V
Sbjct: 155 G-ERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H +V K G + + + ++L++ Y + + +A VF+++ +RD V WN+M+ GY +
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ + E+F +M G+ + T V+ + + +++ +K G+ + V+
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVI 333
Query: 274 NALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+ K K + +AL +F +MEE K++ SW ++++ Q G +D + LF +M G
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ T+S +L H + ++H ++ ++ S + AL+D Y K
Sbjct: 394 KPNHFTYSAILTV--HYPVFV--SEMHAEVIKTNYERSSS--------VGTALLDAYVKL 441
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+ DA VF + KD+ +W+ M+ GY G+ +EA +F + + +KP+E TF V+
Sbjct: 442 GNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVI 501
Query: 453 SAC-SHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAM 507
+AC S + QG++F Y + + + CV + M + G ++ A+E+
Sbjct: 502 NACASPTAAAEQGKQF-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEV-FKR 555
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
E + V W ++++ HG A
Sbjct: 556 QKERDLVSWNSMISGYSQHGQAKKA 580
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 194/372 (52%), Gaps = 20/372 (5%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + P + + YS D K L+ F + + PD+ T C+ C
Sbjct: 47 LFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGS 106
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +++H K GL V +G++LV+ Y+K + + + +VF+E+ R+VV W +++
Sbjct: 107 LDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLL 166
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY+ G + E+F +M EG+ +R+TV+ V++AL+ G G VH +VVK G++
Sbjct: 167 AGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFE 226
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+PV N+LI +Y + + +A ++F+ ME +D +WNS++ + + G +F++M
Sbjct: 227 EAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM 286
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN---- 383
AG +P +TF++V+ +C+ L L L K CK + F +
Sbjct: 287 QLAGVKPTHMTFASVIKSCASLREL-------------ALVKLMQCKALKSGFTTDQIVI 333
Query: 384 -ALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
ALM +KC M DA +F+ M + K+V SW MI G +G +A+++FS M +
Sbjct: 334 TALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGV 393
Query: 442 KPDEVTFVGVLS 453
KP+ T+ +L+
Sbjct: 394 KPNHFTYSAILT 405
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF +L + QPD T S V C+ GRQ+H V GL +D V
Sbjct: 78 LNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGL--------VDHVS 129
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ +L+DMY K ++ D + VF +M +++V SW ++ GY +G ++F M
Sbjct: 130 VGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG 189
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ P+ T V++A + G + G + + M ++G I + +I + R G L +A
Sbjct: 190 VLPNRYTVSTVIAALVNEGVVGIGLQ-VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDA 248
Query: 501 YELALAMPNEANPVVWRTLLA 521
++ M + V W +++A
Sbjct: 249 RDVFDKMEIR-DWVTWNSMIA 268
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N ++ Y D Q KEAL++F + + L+PDE T V + C+ S GR+ +
Sbjct: 62 NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQ-VHCQCV 120
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++G+V + T ++DM + +N+ + M E N V W +LLA +G
Sbjct: 121 KFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEM-GERNVVSWTSLLAGYSWNG 173
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 331/577 (57%), Gaps = 14/577 (2%)
Query: 53 EIHSYMLRTGII-DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++H+ LR G++ + +L++ Y + +++ A F+ + +V +NAM+SG
Sbjct: 89 QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMR-HRDVPAWNAMLSGLCR 147
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A + + F M GV D T ++ C + +H K GLD ++++
Sbjct: 148 NARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFV 207
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+A+++ Y K +EE KVF+ + RD+V WN++++G+ Q G+ A+E+F M G+
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGV 267
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNALIDMYGKGKCVGEAL 290
T+ + SA+ G GR VH +V+ G+D G + NA++DMY K + A
Sbjct: 268 SPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQ 327
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHL 349
+F+ M +D SWN+++T + Q G + ++D M G +P TF +VLPA SHL
Sbjct: 328 RMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHL 387
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL G ++H + GL DV++ ++D+Y KCG + +A ++F + ++
Sbjct: 388 GALQQGTRMHALSIKTGLNL--------DVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRS 439
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN +I G G+ G G +AL +FS M + + PD VTFV +L+ACSH+G + QGR F
Sbjct: 440 TGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFN 499
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+M++ YG+ P +HY C++DM GRAGQL++A++ MP + + +W LL A R+HGN
Sbjct: 500 MMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNV 559
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
++ ++A+Q +F+L+P + G YVLMSN+Y GK++ V ++R +R+QN++K PG S IE+
Sbjct: 560 EMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEV 619
Query: 590 KDGLHTFISSDRS--HPEAKSIYAELHSLTARLREHG 624
K ++ F S ++ HP+ + I EL L A++R G
Sbjct: 620 KRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLG 656
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 185/391 (47%), Gaps = 19/391 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L +C + +H Y ++ G+ D ++I++Y K ++ VF+ +
Sbjct: 172 TVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGM 231
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S ++ T+N++ISG ++ F MR GV PD T L +
Sbjct: 232 SSR-DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGG 290
Query: 154 KKIHGLVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +H + + G D+ D+ G+A+V+ Y K +E A ++F+ +P+RD V WN ++ GY Q
Sbjct: 291 RSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQ 350
Query: 213 IGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A+ V+ M K EG+ + T VL A +G + G +H + +K G + V
Sbjct: 351 NGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVY 410
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +ID+Y K + EA+ +FE + WN++++ G+ L LF +M G
Sbjct: 411 VGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEG 470
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIV----VNGLAKNGSCKDIDDVFMNNALMD 387
PD VTF ++L ACSH + GR + + +AK+ +C ++D
Sbjct: 471 ISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYAC-----------MVD 519
Query: 388 MYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
M+ + G + DA M K D A W ++
Sbjct: 520 MFGRAGQLDDAFDFIRNMPIKPDSAIWGALL 550
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 216/652 (33%), Positives = 358/652 (54%), Gaps = 43/652 (6%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+++K + NP ++ F+ + ++ FT A L+ CA L ++H+Y+ R
Sbjct: 24 LIAKNATQNPQTALTFFTRMQAHAVPSNNFTFP---ALLKACAALRRLLPTLQVHAYLTR 80
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGL 119
G+ S +L++ Y KC YA VF+ + +V ++ A+IS + SN +
Sbjct: 81 LGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAF 140
Query: 120 DFFNHMRQL---------GVLPDKYTFPCLIKCC---CDVMAVLEVKKIHGLVFKLGLDL 167
F MR + GV D + L+ C C + +HGLV K G +
Sbjct: 141 XAFGRMRWMRGWDGSECCGV--DVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGV 198
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVFRR 225
++G+++V+ Y C+ + A +VF +P+ RDVV WN++++G+ GE +AL F
Sbjct: 199 STHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFED 258
Query: 226 MSKEG---IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK----MGYDSGVPVMNALID 278
M EG + +R TV +L + +G + VH + + V V+ AL+D
Sbjct: 259 MVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLD 318
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG------F 332
M+ + + A EIF+ +E K++ W++++ +EQ + LRLF +ML G
Sbjct: 319 MHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEV 378
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ VT +V+ ACS L A IH Y V GL + D + +AL+DM KC
Sbjct: 379 KPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQ--------DARIASALIDMCAKC 430
Query: 393 GSMRDAQMVFTKM--SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
G + + VF++M S + V SW+ MI G+ G+GK AL++FS M +P+E+T++
Sbjct: 431 GDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYIS 490
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH+G + QG+ ME YG+ PT +HY C++D+LGRAG L+EA+ + L MP +
Sbjct: 491 VLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIK 550
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +W +LLAA LHGN L EI +++ L+ G++VL++N+Y G++++V+ +R
Sbjct: 551 ADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMR 610
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R+ +RK PG S+IE+ + +++F++ DRSHPE++ IY EL L R+R+
Sbjct: 611 VELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRK 662
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 23/250 (9%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ KD F WNS++ N L F RM + + TF +L AC+ L L+
Sbjct: 13 ISHKDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASW 413
Q+H Y+ GLA D F AL+D Y KCG A VF +M + DV SW
Sbjct: 72 LQVHAYLTRLGLAA--------DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSW 123
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAK-------LKPDEVTFVGVLSACS---HSGFLSQ 463
+I Y +G EA F M + D V+ ++SAC+ S L +
Sbjct: 124 TALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRR 183
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAA 522
G L+ +YG + ++ M + A+ + +P E VV W +L++
Sbjct: 184 GSAVHGLV-VKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242
Query: 523 SRLHGNTDLA 532
L+G + A
Sbjct: 243 FXLNGEAERA 252
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/630 (33%), Positives = 338/630 (53%), Gaps = 17/630 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L C +SLQ LQ G+ IH++ G+ T+L++MY+KC +
Sbjct: 108 FTFPFLLKAC-SSLQ------ALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 86 ALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A +FN++S + ++ +NAMI+ F + + + M+Q GV P+ T ++
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
A+ + K IH + +V + +AL++ Y KC + A K+F + ++ V W+
Sbjct: 221 GQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWS 280
Query: 205 AMVNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM+ GY AL ++ M G+ + T+ +L A + K G+ +H ++K
Sbjct: 281 AMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIK 340
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G D V N+LI MY K + A+ + M KD S+++I++ Q G + L +
Sbjct: 341 SGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLI 400
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F +M S+G P L T +LPACSHLAAL HG HGY VV G +D + N
Sbjct: 401 FRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFT--------NDTSICN 452
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
A++DMY+KCG + ++ +F +M +D+ SWN MI+GYG+ G EAL +F + LKP
Sbjct: 453 AIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKP 512
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+VT + VLSACSHSG +++G+ + M + + P + HY C++D+L RAG L+EAY
Sbjct: 513 DDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTF 572
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP N +W LLAA R H N ++ E ++++ L P GN+VLMSNIY + G++
Sbjct: 573 IQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRW 632
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
++ IR R +K+PGCSW+E+ +H FI +SHP++ SI +L L ++++
Sbjct: 633 DDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKL 692
Query: 624 GDCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
G + D E+ LY E +A
Sbjct: 693 GYRADSSFVLHDVEEEEKEQILLYHSEKVA 722
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 229/467 (49%), Gaps = 16/467 (3%)
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF-YSNDFAFKGLDFFN 123
DS + T L + +++ A VF+ + +P+V +N MI + +S F + + +
Sbjct: 39 DSDAAATQLARYHISRNEIQLARHVFDQIP-KPSVVLWNMMIRTYAWSGPFQ-QSIYLYL 96
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
HM QLGV P +TFP L+K C + A+ + IH LGL +D+Y+ +AL++ Y KC
Sbjct: 97 HMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCG 156
Query: 184 FMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
+ +A +F + RD+V WNAM+ ++ + + +M + G+ + T+ +
Sbjct: 157 HLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSI 216
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L + G+ +H ++ + V + AL+DMY K + A +IF + +K+
Sbjct: 217 LPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND 276
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
W++++ + + L L+D ML G P T +T+L AC+ L L G+++H
Sbjct: 277 VCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
+++ +G+ D+D + N+L+ MY KCG M +A +M KD S++ +I G
Sbjct: 337 HMIKSGM-------DLDTT-VGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGC 388
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+G ++AL +F M + + P T + +L ACSH L G R G
Sbjct: 389 VQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVR-GFTND 447
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+IDM + G++ + E+ M N + + W T++ +HG
Sbjct: 448 TSICNAIIDMYSKCGKITISREIFDRMQNR-DIISWNTMIIGYGIHG 493
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 335/593 (56%), Gaps = 12/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNN 92
T + L + A L+ G++IH ++R+G+ D +S+ + LINMY K + A VF
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSGL-DQVVSVGNCLINMYVKTGSVSRARTVFWQ 966
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ E ++ ++N MISG + + F + + G+LPD++T +++ C +
Sbjct: 967 MN-EVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH 1025
Query: 153 V-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +IH K G+ LD ++ + L++ Y K MEEA +F D+ WNAM++GY
Sbjct: 1026 LATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYI 1085
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G+F KAL ++ M + G ++ T+ A + K G+ + +VVK G++ +
Sbjct: 1086 VSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLF 1145
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V++ ++DMY K + A IF + D +W ++++ + G + L + M +
Sbjct: 1146 VISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSK 1205
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
QPD TF+T++ ACS L AL GRQIH V A D F+ +L+DMY K
Sbjct: 1206 VQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAF--------DPFVMTSLVDMYAK 1257
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ DA+ +F + + +ASWN MI+G G +EAL F M + PD VTF+GV
Sbjct: 1258 CGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGV 1317
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSHSG +S+ E M+ YG+ P IEHY+C++D L RAG++ EA ++ +MP EA
Sbjct: 1318 LSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEA 1377
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ ++RTLL A R+ + + + A+++ LEP YVL+SN+Y A ++E V R+
Sbjct: 1378 SASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARN 1437
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR+ NV+K+PG SW++LK+ +H F++ DRSH E IY ++ + R+RE G
Sbjct: 1438 MMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEG 1490
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 230/505 (45%), Gaps = 39/505 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++C + + +H Y ++ G+ +L+N+Y+K +++ A +F
Sbjct: 726 TRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLF 785
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +V +N M+ + ++ L F+ + G+ PD T L + V
Sbjct: 786 DGMGLR-DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV 844
Query: 151 LE--VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
LE +K++ KL + D GS DV+ WN ++
Sbjct: 845 LEWQLKQLKAYGTKLFMYDDDDDGS-------------------------DVIAWNKTLS 879
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ Q GE +A++ F M + T +LS + + + G+ +HGIVV+ G D
Sbjct: 880 WFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQ 939
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V N LI+MY K V A +F M E D+ SWN++++ G + ++ +F +L
Sbjct: 940 VVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLL 999
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMH-GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD T ++VL ACS L H QIH + G+ + D F++ L+D
Sbjct: 1000 RGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGV--------VLDSFVSTTLID 1051
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y+K G M +A+ +F D+ASWN M+ GY + G +AL ++ M E+ + +++T
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQIT 1111
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
A L QG++ ++ R G + + V+DM + G++ A + +
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKR-GFNLDLFVISGVLDMYLKCGEMESARRIFNEI 1170
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
P+ + V W T+++ +G + A
Sbjct: 1171 PS-PDDVAWTTMISGCVENGQEEHA 1194
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 232/518 (44%), Gaps = 39/518 (7%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNA 104
++L G+ H+ +L +G +LI MYSKC + A +F+ ++ T+NA
Sbjct: 640 SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNA 699
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
++S D A G F +R+ V ++T + K C + + +HG K+G
Sbjct: 700 ILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIG 757
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
L DV++ ALVN Y K + EA +F+ + LRDVVLWN M+ Y G ++AL +F
Sbjct: 758 LQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFS 817
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
++ G+ T+ + RVV N L + K
Sbjct: 818 EFNRTGLRPDDVTLCTL------------ARVVKS------------KQNVLEWQLKQLK 853
Query: 285 CVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
G L +++ ++ D+ +WN ++ Q G + F M+++ D +TF +L
Sbjct: 854 AYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVML 913
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
+ L L G+QIHG +V +GL + V + N L++MY K GS+ A+ VF
Sbjct: 914 SVVAGLNCLELGKQIHGIVVRSGLDQV--------VSVGNCLINMYVKTGSVSRARTVFW 965
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M++ D+ SWN MI G + G + ++ MF + L PD+ T VL ACS G
Sbjct: 966 QMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCH 1025
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
+ + GVV T +ID+ ++G++ EA E + + W ++
Sbjct: 1026 LATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLFVNQDGFDLASWNAMMHGY 1084
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
+ G D + + E G N + ++N A G
Sbjct: 1085 IVSG--DFPKALRLYILMQESGERANQITLANAAKAAG 1120
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 340/671 (50%), Gaps = 72/671 (10%)
Query: 13 SCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS 72
SC + F P+ L C C G+ +H + G + +
Sbjct: 137 SCRMLRAGTKPDHFTLPYALKACGELPSYCC-------GRALHGLICCNGFESNVFVCNA 189
Query: 73 LINMYSKCCQMKYALFVFNNLSCE--PNVFTYNAMISGFYSNDFAFKGLDFFN------H 124
L+ MYS+C ++ A VF+ ++ + +V ++N++++ L+ F+ H
Sbjct: 190 LVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVH 249
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
+ D + ++ C + A+ ++K+IH + G D ++ +AL++TY KC
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI------WMS---- 234
M +A+KVF + +DVV WNAMV GY Q G F A E+F M KE I W +
Sbjct: 310 MNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG 369
Query: 235 -------------------------RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS- 268
T+ +LSA +G G +H +K S
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSL 429
Query: 269 -----------GVPVMNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCG 315
+ V NALIDMY K + A IF+ + E+++ +W ++ + Q G
Sbjct: 430 DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Query: 316 NHDGTLRLFDRMLSAGFQ--PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
+ + L++F M+S + P+ T S +L AC+HLAAL G+QIH Y+ + +
Sbjct: 490 DSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSV- 548
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
F+ N L+DMY+KCG + A+ VF M K++ SW M+ GYGM G+GKEALD+F
Sbjct: 549 -----YFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIF 603
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +A PD+++F+ +L ACSHSG + QG + +M Y VV + EHY CVID+L R
Sbjct: 604 DKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLAR 663
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
G+L++A++ MP E + V+W LL+A R+H N +LAE A ++ ++ + G+Y L+
Sbjct: 664 CGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLI 723
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
SNIY ++++V IR M++ ++K PGCSW++ K G +F DRSHP + IY+ L
Sbjct: 724 SNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLL 783
Query: 614 HSLTARLREHG 624
L R++ G
Sbjct: 784 ERLIGRIKVMG 794
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 248/527 (47%), Gaps = 63/527 (11%)
Query: 55 HSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
HSY+ SP S+ T ++ Y C K AL V ++ P V+ +N ++
Sbjct: 77 HSYV-------SPKSLGTGVVASYLACGATKDALSVLERVTPSPAVW-WNLLVREHIKEG 128
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ + M + G PD +T P +K C ++ + + +HGL+ G + +V++ +
Sbjct: 129 HLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCN 188
Query: 174 ALVNTYLKCQFMEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMS--- 227
ALV Y +C +E+A VF+E+ + DV+ WN++V + + ALE+F MS
Sbjct: 189 ALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIV 248
Query: 228 KEGIWMSR---FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
E R ++ +L A + + +H ++ G + V NALID Y K
Sbjct: 249 HEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCG 308
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------------------- 325
+ +A+++F +ME KD+ SWN+++T + Q GN LF+
Sbjct: 309 SMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIA 368
Query: 326 ----------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-- 367
+M+ G +P+ VT ++L AC+ L AL G +IH Y + L
Sbjct: 369 GYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLS 428
Query: 368 --AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMD 423
G D +D+ + NAL+DMY+KC S + A+ +F + +++ V +W +MI GY
Sbjct: 429 LDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQY 488
Query: 424 GQGKEALDMFSCMCEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
G +AL +FS M + P+ T +L AC+H L G++ + + P++
Sbjct: 489 GDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSV 548
Query: 482 EHYT-CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
C+IDM + G ++ A + +MP N V W ++++ +HG
Sbjct: 549 YFVANCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMHG 594
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 186/418 (44%), Gaps = 64/418 (15%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +V +YL C ++AL V E + V WN +V + + G +A+ V RM + G
Sbjct: 85 LGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAG 144
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
FT+ L A + + GR +HG++ G++S V V NAL+ MY + + +A
Sbjct: 145 TKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDAS 204
Query: 291 EIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRM------LSAGFQPDLVTFST 341
+F+ + K D+ SWNSI+ H + N L LF M + + D+++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVN 264
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC+ L AL ++IH Y + NG D F+ NAL+D Y KCGSM DA V
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNG--------TFADAFVCNALIDTYAKCGSMNDAVKV 316
Query: 402 FTKMSKKDVASWNIMILGYGMDGQ-----------------------------------G 426
F M KDV SWN M+ GY G
Sbjct: 317 FNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCS 376
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-----------LPLMESRY 475
+EALD F M +P+ VT + +LSAC+ G LSQG E L
Sbjct: 377 QEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGD 436
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDLA 532
G + Y +IDM + A + ++P E N V W ++ +G+++ A
Sbjct: 437 GDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDA 494
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 326/586 (55%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C L+ G++IH Y+LR+GI+ + I+ Y KC +++ +F+ + + N
Sbjct: 249 LSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM-VDKN 307
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ +I+G N F LD F M ++G PD + ++ C ++A+ + +++H
Sbjct: 308 VVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHA 367
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K+ +D D ++ + L++ Y KC + +A KVF + D+V +NAM+ GY++ + +
Sbjct: 368 YAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCE 427
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++FR M + +L + + +HG+++K G +ALID
Sbjct: 428 ALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALID 487
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K VG+A +FE +++KDI W ++ + + Q ++ +L+L+ + + +P+ T
Sbjct: 488 VYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFT 547
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ V+ A S++A+L HG+Q H ++ G DD F+ N L+DMY K GS+ +A
Sbjct: 548 FAAVITAASNIASLRHGQQFHNQVIKMGFD--------DDPFVANTLVDMYAKSGSIEEA 599
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F + KD A WN MI Y G+ ++AL +F M LKP+ VTFVGVLSACSH+
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L G + M S++G+ P IEHY C++ +LGRAG+L EA E MP + VVWR+
Sbjct: 660 GLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRS 718
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ GN +L AA+ P G+YVL+SNI+ + G + V +R M V
Sbjct: 719 LLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGV 778
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PGCSWIE+ + +H FI+ D +H ++ I L +L +++ G
Sbjct: 779 VKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFG 824
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 254/496 (51%), Gaps = 15/496 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C L +IH +++ G + TSLI+ Y+K + A +F+ L + +
Sbjct: 148 VRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTS 207
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
FT+ +I+G+ + L F+ M++ V PDKY ++ C + + K+IH
Sbjct: 208 -FTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHC 266
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + G+ +DV + + ++ Y KC ++ K+F+ + ++VV W ++ G Q FH+
Sbjct: 267 YVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQ-NSFHR 325
Query: 219 -ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL++F M++ G F T VL++ + + GR VH +K+ D+ V N LI
Sbjct: 326 DALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLI 385
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A ++F +M D+ S+N+++ + + L LF M + P L+
Sbjct: 386 DMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLL 445
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
F ++L + L L QIHG I+ G++ D F +AL+D+Y+KC + D
Sbjct: 446 IFVSLLGVSASLYHLELSNQIHGLIIKYGVSL--------DEFAGSALIDVYSKCSRVGD 497
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF ++ KD+ W M GY + +E+L ++ C+ ++LKP+E TF V++A S+
Sbjct: 498 ARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASN 557
Query: 458 SGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L G++F +++ + P + + ++DM ++G + EA++ A N + W
Sbjct: 558 IASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEAHK-AFISTNWKDTACW 614
Query: 517 RTLLAASRLHGNTDLA 532
+++A HG + A
Sbjct: 615 NSMIATYAQHGEAEKA 630
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 231/454 (50%), Gaps = 12/454 (2%)
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFF-NHMRQL 128
+ +L++ YSK + +A +F+ +S N+ T+++M+S + + + L F MR
Sbjct: 77 VNTLLHAYSKLNLVNHANKLFDTMS-HKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSC 135
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
P++Y +++ C + +IHGLV K G DVY+ ++L++ Y K +++A
Sbjct: 136 NEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDA 195
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+F+ L ++ W ++ GY++ G +L++F +M + + ++ ++ VLSA +M+
Sbjct: 196 RLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLML 255
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
F + G+ +H V++ G V ++N ID Y K V ++F+ M +K++ SW +++
Sbjct: 256 KFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVI 315
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q H L LF M G+ PD ++VL +C L AL GRQ+H Y + +
Sbjct: 316 AGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNI- 374
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
D DD F+ N L+DMY KC S+ DA+ VF M+ D+ S+N MI GY + E
Sbjct: 375 ------DNDD-FVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCE 427
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
ALD+F M + P + FV +L + L + L+ +YGV + +I
Sbjct: 428 ALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLI-IKYGVSLDEFAGSALI 486
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
D+ + ++ +A L + + VVW + +
Sbjct: 487 DVYSKCSRVGDA-RLVFEEIQDKDIVVWTAMFSG 519
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 171/318 (53%), Gaps = 1/318 (0%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C + L C L+KG+++H+Y ++ I + LI+MY+KC + A VFN L
Sbjct: 346 CTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFN-LM 404
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
++ +YNAMI G+ D + LD F MR P F L+ + +
Sbjct: 405 AAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSN 464
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IHGL+ K G+ LD + GSAL++ Y KC + +A VFEE+ +D+V+W AM +GY Q
Sbjct: 465 QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
E ++L++++ + + + FT V++A + ++G+ H V+KMG+D V N
Sbjct: 525 ENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN 584
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
L+DMY K + EA + F KD WNS++ + Q G + L++F+ M+ G +P
Sbjct: 585 TLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKP 644
Query: 335 DLVTFSTVLPACSHLAAL 352
+ VTF VL ACSH L
Sbjct: 645 NYVTFVGVLSACSHTGLL 662
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 17/418 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL ++ L + A +L+ +IH +++ G+ + ++LI++YSKC ++ A VF
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + ++ + AM SG+ + L + ++ + P+++TF +I ++ ++
Sbjct: 503 EEIQ-DKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASL 561
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++ H V K+G D D ++ + LV+ Y K +EEA K F +D WN+M+ Y
Sbjct: 562 RHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATY 621
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ GE KAL+VF M EG+ + T GVLSA G G + + G + G+
Sbjct: 622 AQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGI 681
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKD-IFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
++ + G+ + EA E E M K W S+++ GN + L + ++
Sbjct: 682 EHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVE--LGTYAAEMA 739
Query: 330 AGFQP-DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
P D ++ + + ++ R++ + ++G+ K C I+ +NN +
Sbjct: 740 ISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIE---VNNEIHKF 796
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
K + RD+ + + D I GY + K+ C ++LK E+
Sbjct: 797 IAKDTAHRDSAPISLVL---DNLLLQIKGFGYMANTDNKQ------CYTSSQLKSPEI 845
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 220/630 (34%), Positives = 331/630 (52%), Gaps = 47/630 (7%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYALFVF 90
AT + L T+ ++ ++IH+ MLRT + P + + L +S + YA VF
Sbjct: 137 ATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVF 196
Query: 91 NNLSCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ + +PN++++N +I S+D L F + P+K+TFP LIK +
Sbjct: 197 DQIP-QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRC 255
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE--ELPLRDVVLWNAMV 207
L K +HG+ K DV++ ++L++ Y C ++ A VFE E +D+V WN+MV
Sbjct: 256 FLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMV 315
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+ Q G KAL++F RM EG+ + T+ V+SA GR V + +
Sbjct: 316 TGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMM 375
Query: 268 SGVPVMNALIDM-------------------------------YGKGKCVGEALEIFEMM 296
+ V NA IDM Y K G A +IF+ M
Sbjct: 376 MNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSM 435
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFD--RMLSAGFQPDLVTFSTVLPACSHLAALMH 354
KDI +WN +++ +EQ G L +F ++ +G +PD VT + L AC+ L A+
Sbjct: 436 PRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDI 495
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G IHGYI + N + + +L+DMY+K G + A VF + KDV W+
Sbjct: 496 GEWIHGYIKKERIQLNRN--------LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWS 547
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G M G+G+ A+++F M E ++KP+ VTF +L ACSHSG + +G+ ME
Sbjct: 548 AMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERV 607
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
YGVVP +HY+C++D+LGRAG L EA + MP + VW LL A +HGN +LAE
Sbjct: 608 YGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEK 667
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
A R+ ++EPG+ G YVL+SN+Y G +E V ++R MR ++K GCS IE+ +H
Sbjct: 668 ACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVH 727
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
FI D +HP ++ IYA+L + ARLR HG
Sbjct: 728 EFIVGDNAHPLSRDIYAKLDEIMARLRSHG 757
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 322/578 (55%), Gaps = 19/578 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
F + + +A+ C L++G+ +H +++ TG D PL T+L+ MY+KC + A
Sbjct: 31 FIVTSLVAA---CTKLQALEEGRRLHEHLIITGFRTDIPLE-TALLQMYAKCGSLDDAKR 86
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++F ++++I+ + + + M GV P+ TF C + C V
Sbjct: 87 VFEGMEIK-DLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVA 145
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + + IH + + D + +L+N YLKC M EA KVFE + R+V + AM++
Sbjct: 146 GLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMIS 205
Query: 209 GYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Y Q GE +ALE+F RMSK E I + +T +L A+ +G + GR VH + G+D
Sbjct: 206 AYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD 265
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V V NAL+ MYGK EA ++F+ M +++ SW S++ + Q GN L LF RM
Sbjct: 266 TNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM 325
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+P V+FS+ L AC+ L AL GR+IH +V LA M +L+
Sbjct: 326 ---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQ---------METSLLS 373
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY +CGS+ DA+ VF +M +D S N MI + G+ K+AL ++ M + + D +T
Sbjct: 374 MYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGIT 433
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FV VL ACSH+ ++ R+FL + +GVVP +EHY C++D+LGR+G+L +A EL M
Sbjct: 434 FVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETM 493
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P +A+ V W TLL+ + HG+ D E AA++VF+L P YV +SN+Y A ++++
Sbjct: 494 PYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDAR 553
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+R M ++ V + S+IE+ + LH F S R +
Sbjct: 554 RVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQ 591
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 205/397 (51%), Gaps = 14/397 (3%)
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
MI+ + L+ + M + G++ DK+ L+ C + A+ E +++H + G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
D+ + +AL+ Y KC +++A +VFE + ++D+ W++++ YA+ G A+ ++R
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM EG+ + T L + +GR +H ++ + ++L++MY K
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFSTVL 343
+ EA ++FE M+ +++ S+ ++++ + Q G H L LF RM +P+ TF+T+L
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
A L L GR++H ++ G N V + NAL+ MY KCGS +A+ VF
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTN--------VVVQNALVTMYGKCGSPVEARKVFD 292
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
M+ ++V SW MI Y G +EAL++F M ++P V+F L+AC+ G L +
Sbjct: 293 SMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDE 349
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
GRE + P +E T ++ M R G L++A
Sbjct: 350 GREIHHRVVEANLASPQME--TSLLSMYARCGSLDDA 384
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/658 (31%), Positives = 340/658 (51%), Gaps = 74/658 (11%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVF 90
L++ A+L A +T +H +LRT P + + L+ Y K + A VF
Sbjct: 5 LSSQYAALLSAAARTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL------------------- 131
+ + PN+FTYNA++S F M Q ++
Sbjct: 65 DAMP-HPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAV 123
Query: 132 --------PDKYTFPCLIKCCCDVMAVLEV------KKIHGLVFKLGLDLDVYIGSALVN 177
D P I VMA + K+ H + +LG + ++GS LV+
Sbjct: 124 RVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVD 183
Query: 178 TY-------------------------------LKCQFMEEALKVFEELPLRDVVLWNAM 206
Y L+C+ +EEA ++FE + RD + W M
Sbjct: 184 MYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTM 243
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
V G+ Q G +ALE+FRRM +GI + ++T +L+A + + G+ +H +++ Y
Sbjct: 244 VTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRY 303
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
D V V +AL+DMY K + + A +F M K+I SW +++ + Q G + +R+F
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSE 363
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M G PD T +V+ +C++LA+L G Q H +V+GL + + ++NAL+
Sbjct: 364 MQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGL--------MHYITVSNALV 415
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
+Y KCGS+ DA +F +MS D SW ++ GY G+ KE +D+F M +KPD V
Sbjct: 416 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGV 475
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+GVLSACS +GF+ +GR + M+ +G+VP +HYTC+ID+ R+G+L EA E
Sbjct: 476 TFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQ 535
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP + + W TLL+A RL G+ ++ + AA+ + +++P + +YVL+ +++ A G++ EV
Sbjct: 536 MPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEV 595
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR + V+K PGCSWI+ K+ +H F + D+SHP +K IY +L L +++ E G
Sbjct: 596 AQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEG 653
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 212/649 (32%), Positives = 339/649 (52%), Gaps = 66/649 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA + + +H+ ++++ LI++Y KC + A +F+ + E N
Sbjct: 26 LNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRM-LERN 84
Query: 99 VFTYNA-------------------------------MISGFYSNDFAFKGLDFFNHMRQ 127
+F++N+ MISGF + + L +F M
Sbjct: 85 IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHG 144
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G L ++Y+F + C + + +IH LV++ DVY+GSALV+ Y KC +E
Sbjct: 145 HGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEY 204
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A VF+E+ +R V WN+++ Y Q G +AL++F M K G+ T+ V+SA
Sbjct: 205 AQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACAT 264
Query: 248 MGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME--------- 297
+ K G+ +H VVK + + + + NAL+DMY K + EA IF+MM
Sbjct: 265 ISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETS 324
Query: 298 ----------------------EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
KD+ +WN+++ Q G ++ L LF + P
Sbjct: 325 MVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPT 384
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +L AC++LA L GRQ H +++ +G + DVF+ N+L+DMY KCGS+
Sbjct: 385 HYTFGNLLNACANLADLQLGRQAHSHVLKHGF--RFQYGEDSDVFVGNSLIDMYMKCGSV 442
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ VF M +KD SWN MI+GY +G G +AL++F M E+ PD VT +GVL AC
Sbjct: 443 ENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCAC 502
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G L +GR + M +++G++P +HYTC++D+LGRAG L EA L M + + +V
Sbjct: 503 SHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIV 562
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LLAA ++H N L E +++ +++P + G YVL+SN+Y ++ V+ +R MRQ
Sbjct: 563 WGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQ 622
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWIE++ L+ F+ D+ H K IY L ++ ++++ G
Sbjct: 623 RGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAG 671
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 210/420 (50%), Gaps = 47/420 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA +L+ G +IHS + R+ + ++L++MYSKC +++YA VF+ ++
Sbjct: 156 SALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVR 215
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
V ++N++I+ + N + L F M + GV PD+ T ++ C + A+ E ++I
Sbjct: 216 SRV-SWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQI 274
Query: 157 HGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR----------------- 198
H V K D+ +G+AL++ Y KC + EA +F+ +P+R
Sbjct: 275 HARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASK 334
Query: 199 --------------DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
DV+ WNA++ G Q GE +AL +FR + +E +W + +T +L+A
Sbjct: 335 VKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNA 394
Query: 245 LIMMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ + GR H V+K G+ DS V V N+LIDMY K V +F+ M E
Sbjct: 395 CANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLE 454
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
KD SWN+++ + Q G + L +F +ML +G PD VT VL ACSH L GR
Sbjct: 455 KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGR-- 512
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
Y + A++G D ++D+ + G + +A+ + +MS + D W ++
Sbjct: 513 --YYFRSMTAQHGLMPLKDHY---TCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLL 567
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 224/512 (43%), Gaps = 83/512 (16%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
G H++ + D F L+ C + + ++H + K + +I + L++
Sbjct: 3 GNGLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLID 62
Query: 178 TYLKCQFMEEALKVFEELPLRDVVL-------------------------------WNAM 206
Y KC ++ A K+F+ + R++ WN+M
Sbjct: 63 VYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSM 122
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ Q G F +AL F +M G ++ ++ LSA + K G +H +V + Y
Sbjct: 123 ISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNY 182
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
S V + +AL+DMY K V A +F+ M + SWNS++T +EQ G D L++F
Sbjct: 183 LSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVE 242
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI-DDVFMNNAL 385
M+ G +PD VT ++V+ AC+ ++A+ G+QIH +V C + +D+ + NAL
Sbjct: 243 MIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV--------KCDEFRNDLILGNAL 294
Query: 386 MDMYTKCGSMRDAQMV-------------------------------FTKMSKKDVASWN 414
+DMY KC + +A+++ F+ M KDV +WN
Sbjct: 295 LDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN 354
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE-----FLP 469
+I G +G+ +EAL +F + + P TF +L+AC++ L GR+
Sbjct: 355 ALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKH 414
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+YG + +IDM + G + + M E + V W ++ +G
Sbjct: 415 GFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHML-EKDCVSWNAMIVGYAQNGFG 473
Query: 530 DLAEIAAQRVF--QLEPGHCGNYVLMSNIYVA 559
+ A VF LE G ++V M + A
Sbjct: 474 N----KALEVFCKMLESGEAPDHVTMIGVLCA 501
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 195/589 (33%), Positives = 327/589 (55%), Gaps = 9/589 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ L+ C Q +L +++H ++++ + + + +L+++Y +C +++ A VF+ L
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL-V 90
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ + ++NAMI+G+ + A + F M GV P+ T+ ++K C + A+ K+
Sbjct: 91 KKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKE 150
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H + GL+ DV +G+AL+ Y KC + EA ++F+ L D++ W M+ YAQ G
Sbjct: 151 VHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGN 210
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A + +M +EG + T +L+A G K + VH + G + V V A
Sbjct: 211 GKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTA 270
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+ MY K + +A +F+ M+ +D+ SWN ++ + G LF +M + G +PD
Sbjct: 271 LVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPD 330
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+ F ++L AC+ AL ++IH + + +GL DV + AL+ MY+K GS+
Sbjct: 331 AIMFLSILNACASAGALEWVKKIHRHALDSGLEV--------DVRVGTALVHMYSKSGSI 382
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA++VF +M ++V SWN MI G G G++AL++F M +KPD VTFV VLSAC
Sbjct: 383 DDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSAC 442
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + +GR M YG+ P + H C++D+LGRAG+L EA M + +
Sbjct: 443 SHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEAT 502
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LL + R +GN +L E+ A+ +L+P + YVL+SNIY GK++ V +R MR+
Sbjct: 503 WGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRE 562
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +RK PG SWIE+ + +H F+ +D SHPE K I + +++ G
Sbjct: 563 RGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEG 611
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 210/402 (52%), Gaps = 12/402 (2%)
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
Q G++ D + + ++K C ++ K++H + K ++ + ++ + L++ Y++C ++
Sbjct: 21 QRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQ 80
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
EA VF+ L + WNAM+ GY + A+ +FR M EG+ + T +L A
Sbjct: 81 EARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACA 140
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ K G+ VH + G +S V V AL+ MYGK + EA IF+ + DI SW
Sbjct: 141 SLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTV 200
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + Q GN RL +M GF+P+ +T+ ++L AC+ AL +++H + + G
Sbjct: 201 MIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAG 260
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L DV + AL+ MY K GS+ DA++VF +M +DV SWN+MI + G+G
Sbjct: 261 LEL--------DVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRG 312
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYT 485
EA D+F M KPD + F+ +L+AC+ +G L ++ ++S G+ + T
Sbjct: 313 HEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDS--GLEVDVRVGT 370
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ M ++G +++A + M N V W +++ HG
Sbjct: 371 ALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG 411
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 151/311 (48%), Gaps = 12/311 (3%)
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ V + G+ F VL + + VH ++K + VMN L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y + + EA +F+ + +K SWN+++ + + + + +RLF M G QP+
Sbjct: 71 HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ +L AC+ L+AL G+++H I GL DV + AL+ MY KCGS+ +
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLE--------SDVRVGTALLRMYGKCGSINE 182
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ +F + D+ SW +MI Y G GKEA + M + KP+ +T+V +L+AC+
Sbjct: 183 ARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACAS 242
Query: 458 SGFLSQ-GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G L R +++ G+ + T ++ M ++G +++A + M + V W
Sbjct: 243 EGALKWVKRVHRHALDA--GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSW 299
Query: 517 RTLLAASRLHG 527
++ A HG
Sbjct: 300 NVMIGAFAEHG 310
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/583 (34%), Positives = 333/583 (57%), Gaps = 36/583 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C + +L + +H++M++T +S+ L+++Y K + A VF+ + +
Sbjct: 71 LQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK- 129
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ AMI+ + ++ + L FF M+ +G+ P+ +TF ++ C D+ + E H
Sbjct: 130 NVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FH 186
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K G + +V++G+ LV+ Y K +E A ++F+++P RDVV WNAM+ GY Q G
Sbjct: 187 DEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIE 246
Query: 218 KALEVFRRMSKEGI--W---MSRFTVTGVLSALI-----------------MMGFFKNGR 255
AL++F+ + K + W M+ + G + + + G+ +NG
Sbjct: 247 DALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGS 306
Query: 256 VVHGI-VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
V + ++ + V NA+I + + V EAL++F+ M E ++ SWN+++ + Q
Sbjct: 307 VKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQN 366
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L+LF +M +P+ TF+ VLPAC+ LA L G + H ++ +G
Sbjct: 367 GQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQS----- 421
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
DV + N L+ MY KCGS+ DA+ VF +M ++D AS + MI+GY ++G KE+L++F
Sbjct: 422 ---DVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFE 478
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M LKPD VTFVGVLSAC H+G + +GR++ +M Y + P +EHY C+ID+LGRA
Sbjct: 479 QMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRA 538
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G +EA +L MP + + +W +LL+A R H N DL E AQ + L P + YVL+S
Sbjct: 539 GCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLS 598
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
NIY A G+++++ +R+ M+ + V+K GCSWI +K +H F+
Sbjct: 599 NIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFL 641
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 23/263 (8%)
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L + M+ G P T+ ++L C + +L + +H +++ C+DI
Sbjct: 48 ALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQF----ECQDIS-- 101
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ N L+ +Y K GS+ +A+ VF +M K+V SW MI Y G+EAL F M +
Sbjct: 102 -LGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDV 160
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P+ TF +L AC+ L + + + + G + ++DM + G +
Sbjct: 161 GIQPNHFTFASILPACTDLEVLGEFHDEI----VKGGFESNVFVGNGLVDMYAKRGCIEF 216
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A EL MP + + V W ++A +G + A ++FQ P V+ N +A
Sbjct: 217 ARELFDKMP-QRDVVSWNAMIAGYVQNGLIE----DALKLFQEIPKR---DVITWNTMMA 268
Query: 560 G----GKYEEVLDIRHTMRQQNV 578
G G E +++ M +QN+
Sbjct: 269 GYAQCGDVENAVELFEKMPEQNL 291
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/631 (32%), Positives = 344/631 (54%), Gaps = 19/631 (3%)
Query: 1 MLSKISRINPFSSCFNFST--SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYM 58
+L+ +SR P ++ +F + SS + P + A A A + G H++
Sbjct: 90 LLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFA---AVFTAAARVPSASAGAVAHAFA 146
Query: 59 LRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
+ ++ T+L+NMY K + A VF+ + N ++ AM+SG+ + +
Sbjct: 147 CKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMP-HRNAVSWAAMVSGYATGKCS 205
Query: 116 FKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
+ + F M Q L +++ ++ + +L ++HGLV K GL V + ++
Sbjct: 206 EEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENS 265
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
LV Y K + M+ A+ VF R+ + W+AM+ GYAQ GE A +F +M G +
Sbjct: 266 LVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPT 325
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF- 293
FT G+L+A MG G+ HG++VK+G++ V V +AL+DMY K C G+A + F
Sbjct: 326 EFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFH 385
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
++ + D+ W +++T H Q G H+ L L+ RM G P +T ++VL AC+ LAAL
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALE 445
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+Q+H I+ G GS + AL MY+KCG++ D+ +VF +M +D+ SW
Sbjct: 446 PGKQLHAQILKCGFGLGGS--------VGTALSTMYSKCGNLEDSMVVFRRMPDRDIISW 497
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I G+ G+G++ALD+F M + PD +TF+ VL ACSH G + +G + M
Sbjct: 498 NSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSK 557
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
YG++P ++HY C++D+L RAGQL EA + ++ + +WR +L A R + D+
Sbjct: 558 DYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGA 617
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A +++ +L Y+L+SNIY A K+ +V +RH MR + V K+PGCSW+EL + +
Sbjct: 618 YAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQV 677
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ F+ ++ HPEA+ I EL L +++ G
Sbjct: 678 NVFVVGEQQHPEAEKINVELIRLAKHMKDEG 708
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 175/387 (45%), Gaps = 20/387 (5%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQ--FMEEALKVFEELP--LRDVVLWNAMVNGYA 211
+HG K G + ++L+ Y + A VF ++P LRDV WN+++N +
Sbjct: 36 LHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLS 95
Query: 212 QIGEFHKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ AL FR M S + + + + V +A + G V H K+ SG
Sbjct: 96 RHQPL-AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSG 154
Query: 270 ---VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
V V AL++MY K + +A +F+ M ++ SW ++++ + + LF
Sbjct: 155 SNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRL 214
Query: 327 MLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
ML + + + VL A S L+ G Q+HG ++ +GL + V + N+L
Sbjct: 215 MLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGL--------VGFVSVENSL 266
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K M A VF +++ +W+ MI GY +G+ A MF M A P E
Sbjct: 267 VTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTE 326
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
TFVG+L+A S G L G++ LM + G + + ++DM + G +A +
Sbjct: 327 FTFVGILNASSDMGALVVGKQAHGLM-VKLGFERQVYVKSALVDMYAKCGCTGDAKDGFH 385
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + + V+W ++ +G + A
Sbjct: 386 QLYDVDDVVIWTAMITGHVQNGEHEEA 412
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 129/290 (44%), Gaps = 19/290 (6%)
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMY--GKGKCVGEALEIFEMMEE--KDIFSWNSI 307
+ G +HG +K G S PV N+LI Y +G A +F + +D+ SWNS+
Sbjct: 31 RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90
Query: 308 MTVHEQCGNHD--GTLRLFDRMLSA--GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+ H L F M+S+ P +F+ V A + + + G H +
Sbjct: 91 LN---PLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFAC 147
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
K S ++VF++ AL++MY K G++ DA+ VF +M ++ SW M+ GY
Sbjct: 148 -----KLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202
Query: 424 GQGKEALDMFSCMC-EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+EA ++F M E L+ +E VLSA S L G + L+ + G+V +
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLV-LKDGLVGFVS 261
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M +A ++ A + E N + W ++ +G D A
Sbjct: 262 VENSLVTMYAKAECMDAAMAV-FGSSKERNSITWSAMITGYAQNGEADCA 310
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 203/577 (35%), Positives = 335/577 (58%), Gaps = 18/577 (3%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH+ +++TG++ + +SL+ MY KC + A+++FN + E +V +N +IS +Y
Sbjct: 125 GKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP-EKDVACWNTVISCYY 183
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L++F MR+ G P+ T I C ++ + +IH + G LD +
Sbjct: 184 QSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF 243
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
I SALV+ Y KC +E A+++FE++P + VV WN+M++GY G+ +++F+RM EG
Sbjct: 244 ISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEG 303
Query: 231 IWMSRFTVTGVLSALIMM----GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ + T+T LS+LIM+ G+ VHG ++ V V ++L+D+Y K V
Sbjct: 304 V---KPTLT-TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A +IF+++ + + SWN +++ + G L LF M + + D +TF++VL AC
Sbjct: 360 ELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTAC 419
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S LAAL G++IH I+ L D ++V M AL+DMY KCG++ +A VF +
Sbjct: 420 SQLAALEKGKEIHNLIIEKKL-------DNNEVVMG-ALLDMYAKCGAVDEAFSVFKCLP 471
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
K+D+ SW MI YG G AL++F+ M ++ +KPD V F+ +LSAC H+G + +G
Sbjct: 472 KRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCY 531
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRL 525
+ M + YG++P +EHY+C+ID+LGRAG+L+EAYE+ P + V + TL +A RL
Sbjct: 532 YFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRL 591
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
H N DL A+ + +P Y+L+SN+Y + K++EV +R M++ ++KNPGCS
Sbjct: 592 HRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCS 651
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
WIE+ + F D SH + ++ L L+ + +
Sbjct: 652 WIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMED 688
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 268/493 (54%), Gaps = 13/493 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + +L++G+ IH ++ G+ + +LIN Y C +A VF+N+
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCE 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +N +++G+ N + L+ F + L PD YT+P + K C + + K IH
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GL +D+ +GS+LV Y KC E+A+ +F E+P +DV WN +++ Y Q G F
Sbjct: 130 TCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFK 189
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
ALE F M + G + T+T +S+ + G +H ++ G+ + +AL+
Sbjct: 190 DALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALV 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMYGK + A+EIFE M +K + +WNS+++ + G+ ++LF RM + G +P L
Sbjct: 250 DMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLT 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+++ CS A L+ G+ +HGY + N + DVF+N++LMD+Y KCG +
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQP--------DVFVNSSLMDLYFKCGKVEL 361
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ +F + K V SWN+MI GY +G+ EAL +FS M ++ ++ D +TF VL+ACS
Sbjct: 362 AEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQ 421
Query: 458 SGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L +G+E L +E + + ++DM + G ++EA+ + +P + V W
Sbjct: 422 LAALEKGKEIHNLIIEKKLDNNEVV--MGALLDMYAKCGAVDEAFSVFKCLPKR-DLVSW 478
Query: 517 RTLLAASRLHGNT 529
+++ A HG+
Sbjct: 479 TSMITAYGSHGHA 491
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 171/325 (52%), Gaps = 4/325 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T I+S CA +L +G EIH ++ +G + ++L++MY KC ++ A+ +F
Sbjct: 209 TITTAISS---CARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIF 265
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + V +N+MISG+ + F M GV P T LI C +
Sbjct: 266 EQMP-KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARL 324
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
LE K +HG + + DV++ S+L++ Y KC +E A K+F+ +P VV WN M++GY
Sbjct: 325 LEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGY 384
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G+ +AL +F M K + T T VL+A + + G+ +H ++++ D+
Sbjct: 385 VAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNE 444
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
VM AL+DMY K V EA +F+ + ++D+ SW S++T + G+ G L LF ML +
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQS 504
Query: 331 GFQPDLVTFSTVLPACSHLAALMHG 355
+PD V F +L AC H + G
Sbjct: 505 NVKPDRVAFLAILSACGHAGLVDEG 529
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 201/391 (51%), Gaps = 12/391 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR- 198
L++ C + ++ + K IH V LGL D+++ L+N YL C + A VF+ +
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRR-MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
++ LWN ++ GY + + +ALE+F + + + +T V A + + G+++
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H ++K G + V ++L+ MYGK +A+ +F M EKD+ WN++++ + Q GN
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L F M GF+P+ VT +T + +C+ L L G +IH ++ +G +
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF--------LL 240
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D F+++AL+DMY KCG + A +F +M KK V +WN MI GYG+ G + +F M
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMY 300
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+KP T ++ CS S L +G+ F+ R + P + + ++D+ + G++
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGK-FVHGYTIRNRIQPDVFVNSSLMDLYFKCGKV 359
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGN 528
A ++ +P ++ V W +++ G
Sbjct: 360 ELAEKIFKLIP-KSKVVSWNVMISGYVAEGK 389
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 200/612 (32%), Positives = 341/612 (55%), Gaps = 19/612 (3%)
Query: 23 NQT-FNHPFTLAT-CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
NQT FN P T+ C +L++ A + L +G+++H+++++ G ++++Y KC
Sbjct: 49 NQTHFNDPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKC 108
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG------LDFFNHMRQLGVLPDK 134
+ + A +F L NV ++N MI + + +F M ++PD
Sbjct: 109 QEAEDAKKLFEELPVR-NVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDH 167
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
TF LI C + ++H K+G DLD ++G ALV Y KC F+E A +VF +
Sbjct: 168 ITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCD 227
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI--MMGFFK 252
+ RD+V+WN MV+ Y +A VF M + + FT + +LS + + ++
Sbjct: 228 VSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYD 287
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ VH +V++ +DS V V +ALI+MY K + + +A +F+ M +++ +WN+++
Sbjct: 288 FGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFG 347
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G+ + ++L ML GF PD +T S+++ +C + +A+ Q+H + V S
Sbjct: 348 NHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAV------KLS 401
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C+D V N+L+ Y+KCGS+ A F S+ D+ +W +I Y G +++ +M
Sbjct: 402 CQDFLSV--ANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEM 459
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M +KPD + F+GVLSAC+H G +++G + LM + Y +VP EHYTC++D+LG
Sbjct: 460 FEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLG 519
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
R G +NEA+E+ +MP E + + + +LH N +LA++AA+++F +EP NY +
Sbjct: 520 RYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAV 579
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
MSNI+ + + +V IR TM + K PGCSWIE+ + +H+F+S+D+SHP A +Y
Sbjct: 580 MSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVT 639
Query: 613 LHSLTARLREHG 624
L+ L ++E
Sbjct: 640 LNMLLRPMKEQN 651
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/586 (34%), Positives = 319/586 (54%), Gaps = 66/586 (11%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
SLI++ +K + A +F ++ EP+ ++N+M+SGF +D + L++F M +
Sbjct: 85 NSLISVLTKSGFLDEAARLFGSMP-EPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDF 143
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
L ++Y+F + C +M + ++H LV K DVY+GSAL++ Y KC + A +
Sbjct: 144 LLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEE 203
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF + R++V WN+++ Y Q G +ALEVF RM G+ T+ V+SA +
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263
Query: 251 FKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME------------ 297
K G +H VVK + + + NAL+DMY K V EA +F+ M
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323
Query: 298 -------------------EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
++++ SWN+++ + Q G ++ LRLF + P T
Sbjct: 324 GYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT 383
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +L + D+F+ N+L+DMY KCGS+ D
Sbjct: 384 FGNLLKS--------------------------------DIFVGNSLIDMYMKCGSIEDG 411
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF KM ++D SWN +I+GY +G G EAL +F M KPD VT +GVL ACSH+
Sbjct: 412 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 471
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +GR + ME +G++P +HYTC++D+LGRAG LNEA L AMP + VVW +
Sbjct: 472 GLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 530
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LLAA ++HGN ++ + AA+++ +++P + G YVL+SN+Y G++ +V+ +R MRQQ V
Sbjct: 531 LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGV 590
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PGCSWIE++ +H F+ D+SHP K IY+ L LT +++ G
Sbjct: 591 TKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVG 636
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 209/441 (47%), Gaps = 59/441 (13%)
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
LP+ F L+ C + + +H + ++++I + L++ Y KC +++A K
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 191 VFEELPLR-------------------------------DVVLWNAMVNGYAQIGEFHKA 219
+F+ +P R D WN+MV+G+AQ F ++
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
LE F +M +E ++ ++ LSA + G VH +V K Y + V + +ALIDM
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K V A E+F M E+++ +WNS++T +EQ G L +F RM+ +G +PD VT
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTL 251
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++V+ AC+ L AL G QIH +V K DD+ + NAL+DMY KC + +A+
Sbjct: 252 ASVVSACASLCALKEGLQIHARVVKTN-------KFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF +MS ++V S M+ GY K A MFS M + + V++ +++ + +G
Sbjct: 305 RVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VSWNALIAGYTQNG 360
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYT-------------CVIDMLGRAGQLNEAYELALA 506
+ L++ R + PT HYT +IDM + G + + +
Sbjct: 361 ENEEALRLFRLLK-RESIWPT--HYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEK 417
Query: 507 MPNEANPVVWRTLLAASRLHG 527
M E + V W ++ +G
Sbjct: 418 M-KERDCVSWNAIIVGYAQNG 437
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 200/431 (46%), Gaps = 69/431 (16%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA +L G ++H+ + ++ ++LI+MYSKC + A VF+ + E
Sbjct: 152 SALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM-IE 210
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ T+N++I+ + N A + L+ F M G+ PD+ T ++ C + A+ E +I
Sbjct: 211 RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQI 270
Query: 157 HGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPL------------------ 197
H V K D+ +G+ALV+ Y KC + EA +VF+ + +
Sbjct: 271 HARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAAS 330
Query: 198 -------------RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
R+VV WNA++ GY Q GE +AL +FR + +E IW + +T +L +
Sbjct: 331 VKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKS 390
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
I +G N+LIDMY K + + +FE M+E+D SW
Sbjct: 391 DIFVG------------------------NSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 426
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+I+ + Q G L++F +ML G +PD VT VL ACSH + GR +
Sbjct: 427 NAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE 486
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMD 423
+GL + D + ++D+ + G + +A+ + M D W ++ +
Sbjct: 487 HGLIP------LKDHY--TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVH 538
Query: 424 GQ---GKEALD 431
G GK A +
Sbjct: 539 GNIEMGKHAAE 549
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 147/318 (46%), Gaps = 59/318 (18%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFV 89
TLA+ +++ CA L++G +IH+ +++T L + +L++MY+KC ++ A V
Sbjct: 250 TLASVVSA---CASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306
Query: 90 FNNLS------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
F+ +S + NV ++NA+I+G+ N + L
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEAL 366
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F +++ + P YTF L+K D+++G++L++ Y
Sbjct: 367 RLFRLLKRESIWPTHYTFGNLLKS------------------------DIFVGNSLIDMY 402
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
+KC +E+ +VFE++ RD V WNA++ GYAQ G +AL++FR+M G T+
Sbjct: 403 MKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMI 462
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-E 298
GVL A G + GR + + G ++D+ G+ C+ EA + E M
Sbjct: 463 GVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVN 522
Query: 299 KDIFSWNSIMTVHEQCGN 316
D W S++ + GN
Sbjct: 523 PDAVVWGSLLAACKVHGN 540
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 343/603 (56%), Gaps = 18/603 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PFT + ++++ A Q + G+ +H+ ++ G + SLINMYSKC ++
Sbjct: 198 WPNPFTFTSVLSAV---ASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEE 254
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF + ++ ++N +++G N+ + L F+ R + T+ +IK C
Sbjct: 255 AKAVFRQMETR-DMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA 313
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWN 204
++ + +++H V K G D + +A+++ Y KC +++A +F +P ++VV W
Sbjct: 314 NLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWT 373
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM+ G Q + A +F RM ++ + + FT + VL+A I + + +H ++K
Sbjct: 374 AMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQ----IHAQIIKT 429
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y V AL+ Y K EAL IF+M++ KD+ +W+++++ + Q G+ DG +F
Sbjct: 430 NYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVF 489
Query: 325 DRMLSAGFQPDLVTFSTVLPAC-SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+M G +P+ T S+ + AC S A + GRQ H + + D + + +
Sbjct: 490 IKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISI--------KYRYQDAICVGS 541
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY + GS+ A++VF + + +D+ SWN MI GY G KEALD F M ++
Sbjct: 542 ALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D TF+ V+ C+H+G + +G+++ M + + PT+EHY+C++D+ RAG+L+E L
Sbjct: 602 DGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNL 661
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A +VWRTLL A R+H N +L ++AAQ++ LEP YVL+SNIY A G++
Sbjct: 662 IEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRW 721
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+E ++R M + V+K GCSWI++K+ +H+FI+ D+SHP ++ IYA+L ++T RL++
Sbjct: 722 KERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQE 781
Query: 624 GDC 626
G C
Sbjct: 782 GYC 784
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 202/395 (51%), Gaps = 16/395 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
++K C + + +++H L K G D +V +G+ALV+ Y+KC +E+ VFE +P R
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
+VV W +++ GY Q + +F RM EG+W + FT T VLSA+ G GR VH
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
VK G S V V N+LI+MY K V EA +F ME +D+ SWN++M +
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
L+LF ++ + T+STV+ C++L L RQ+H ++ +G +G+
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGN------ 338
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ A+MD Y+KCG + DA +F M ++V SW MI G + A +FS M
Sbjct: 339 --VMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMR 396
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
E +KP+E T+ VL+A S L Q ++++ Y P++ T ++ + G
Sbjct: 397 EDNVKPNEFTYSTVLTA-SIPILLPQIHA--QIIKTNYQHAPSVG--TALLASYSKLGNT 451
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
EA + M + + V W +L+ G+ D A
Sbjct: 452 EEALSI-FKMIDHKDVVAWSAMLSCYSQAGDCDGA 485
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/492 (25%), Positives = 231/492 (46%), Gaps = 18/492 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L++C + G+++H ++ G + + + T+L++MY KC ++ VF + +
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP-KR 164
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV T+ ++++G+ + F MR GV P+ +TF ++ AV +++H
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G V++ ++L+N Y KC +EEA VF ++ RD+V WN ++ G
Sbjct: 225 AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQL 284
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++F +S+ T + V+ + R +H V+K G+ S VM A++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344
Query: 278 DMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
D Y K + +A IF +M +++ SW +++ Q + LF RM +P+
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T+STVL A + L+ QIH I+ S + AL+ Y+K G+
Sbjct: 405 FTYSTVLTA--SIPILLP--QIHAQIIKTNYQHAPS--------VGTALLASYSKLGNTE 452
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC- 455
+A +F + KDV +W+ M+ Y G A ++F M +KP+E T + AC
Sbjct: 453 EALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACA 512
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S + + QGR+F + +Y I + ++ M R G ++ A + + + V
Sbjct: 513 SPTAGIDQGRQFHAI-SIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRDLVS 570
Query: 516 WRTLLAASRLHG 527
W ++++ HG
Sbjct: 571 WNSMISGYAQHG 582
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 41/247 (16%)
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
A++D +GK GEAL+ F + VH +CG G
Sbjct: 70 AIVDYGRRGKGRGEALDHF--------------VDVH-RCGRVQGA-------------- 100
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
S VL C + + G Q+H V G D +V + AL+DMY KCG
Sbjct: 101 ---AVSRVLKVCGLIPDRVSGEQLHCLCVKCGF-------DRAEVGVGTALVDMYMKCGG 150
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ D ++VF M K++V +W ++ GY + + +F M + P+ TF VLSA
Sbjct: 151 VEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSA 210
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ G + GR + ++G T+ +I+M + G + EA + M + V
Sbjct: 211 VASQGAVDLGRR-VHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR-DMV 268
Query: 515 VWRTLLA 521
W TL+A
Sbjct: 269 SWNTLMA 275
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 204/591 (34%), Positives = 334/591 (56%), Gaps = 15/591 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLR--TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
L+ CA L G+ +H+ +R T D+ ++ +L++MY+KC M ++ +N S E
Sbjct: 106 LKACAMLPALAHGRALHALAIRSCTAYTDAFVA-AALVHMYAKCRGMVGSINAYNAFS-E 163
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
P++ +M++G+ N A + L+FF+ H+ G +P T +I + VL +
Sbjct: 164 PDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQA 223
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
H V + + D+ + +A++ Y++ ++ A ++FE + +DVV W+ MV GY Q G+
Sbjct: 224 CHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGD 283
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+AL +++M + GI + TV V+ A + + GR VH I VK+G + + V A
Sbjct: 284 ICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATA 343
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K C EA+++F M +KD +W +++ Q G D ++R+F ML G PD
Sbjct: 344 LVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPD 403
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT VL ACS + +HGY+V+ G D +F+ AL+D+Y+KCG++
Sbjct: 404 AVTMVKVLAACSESGVMRQAFCLHGYLVITGFC--------DKIFVAAALVDLYSKCGNL 455
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A VF +KDV W+ MI GYG+ G G++A+++F M + +KP+ +TFV VLSAC
Sbjct: 456 GCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSAC 515
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SHSG + +G+ M YGVVP H++ ++D+LGRAG+L EA +L L A+
Sbjct: 516 SHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKL-LHGNGRADAHT 574
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W LLAA R H +T+++E+ A ++ +L+P H G Y L++NIY + + R+ +R
Sbjct: 575 WCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRD 634
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
+ + K PGCS +EL + +HTF + +R H + + I L + L+ GDC
Sbjct: 635 RGLNKVPGCSAVELNNVMHTFTAGERPHKDWEKISRLLREFSRTLKG-GDC 684
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 243/498 (48%), Gaps = 33/498 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEP 97
L+ A + +H+++LR+G + S +TS ++ Y A +F+ + P
Sbjct: 11 LEAAADSSTPVAAARLHAHLLRSGHLHSSHHLTSHVLASYPT----GLARHLFDEIPV-P 65
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NA++ A + D + L V PD +T L+K C + A+ + +H
Sbjct: 66 TPRLANALLRAHVR---ARQWCDALLLIPCLRVRPDAFTLSLLLKACAMLPALAHGRALH 122
Query: 158 GLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
L + D ++ +ALV+ Y KC+ M ++ + D+VL +MV GY Q
Sbjct: 123 ALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMA 182
Query: 217 HKALEVF-RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ALE F R + +G S T+ V+SA + NG+ H V++ ++ + ++NA
Sbjct: 183 AEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNA 242
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ Y + V A +FE M EKD+ +W+ ++T + Q G+ L + +M+ AG +P+
Sbjct: 243 ILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPN 302
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT +V+ ACS + GR++H V G C+ ++ + AL+DMY KC
Sbjct: 303 AVTVVSVVQACSLAPDIEEGRRVHDIAVKIG------CE--LEMTVATALVDMYMKCSCH 354
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A +F +MSKKD +W ++I G+ +G E++ +F CM PD VT V VL+AC
Sbjct: 355 EEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAAC 414
Query: 456 SHSGFLSQG---REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA---YELALAMPN 509
S SG + Q +L + G I ++D+ + G L A +E A+
Sbjct: 415 SESGVMRQAFCLHGYLVIT----GFCDKIFVAAALVDLYSKCGNLGCAVRVFESAM---- 466
Query: 510 EANPVVWRTLLAASRLHG 527
E + V+W ++++ +HG
Sbjct: 467 EKDVVLWSSMISGYGVHG 484
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 200/386 (51%), Gaps = 13/386 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P TL + I++ A ++ GQ H++++R + + +++ Y + ++ A
Sbjct: 202 PVTLVSVISA---AAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARR 258
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F ++ E +V T++ M++G+ + + L + M + G+ P+ T +++ C
Sbjct: 259 LFEGMT-EKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAP 317
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E +++H + K+G +L++ + +ALV+ Y+KC EEA+++F + +D V W +++
Sbjct: 318 DIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVIS 377
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ Q G +++ VF+ M G + T+ VL+A G + +HG +V G+
Sbjct: 378 GFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCD 437
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V AL+D+Y K +G A+ +FE EKD+ W+S+++ + G + LF M+
Sbjct: 438 KIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMV 497
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQI-HGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
++ +P+ +TF +VL ACSH + G++I V G+ N ++A++D
Sbjct: 498 ASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNA--------VHHSAMVD 549
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASW 413
+ + G +++A + + D +W
Sbjct: 550 LLGRAGELQEAAKLLHGNGRADAHTW 575
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 5/288 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ +Q C+ ++++G+ +H ++ G T+L++MY KC + A+ +F +
Sbjct: 305 TVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRM 364
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + + + +ISGF N + + F M G PD T ++ C + + +
Sbjct: 365 S-KKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQA 423
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+HG + G +++ +ALV+ Y KC + A++VFE +DVVLW++M++GY
Sbjct: 424 FCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVH 483
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G +A+E+F+ M + + T VLSA G + G R+ + G
Sbjct: 484 GLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVH 543
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+A++D+ G+ + EA ++ D +W +++ C H T
Sbjct: 544 HSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAA---CRAHHDT 588
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 26 FNHPFTLA-TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F PF A T + L C+ +++ +H Y++ TG D +L+++YSKC +
Sbjct: 397 FGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLG 456
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A+ VF + + E +V +++MISG+ + + ++ F M V P+ TF ++ C
Sbjct: 457 CAVRVFES-AMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSAC 515
Query: 145 CDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
V E K+I + G+ + SA+V+ + ++EA K+ D W
Sbjct: 516 SHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTW 575
Query: 204 NAMV 207
A++
Sbjct: 576 CALL 579
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 329/591 (55%), Gaps = 12/591 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC+ L+ A +++ + +H Y+L+ G + SLI Y KC +++ A +F+ L
Sbjct: 162 TCV--LKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDEL 219
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + +V ++N+MISG N F+ GL+FF M LGV D T ++ C +V +
Sbjct: 220 S-DRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLG 278
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +H K G V + L++ Y KC + A +VF ++ +V W +++ + +
Sbjct: 279 RALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVRE 338
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G ++A+ +F M +G+ + VT V+ A GR VH + K S +PV
Sbjct: 339 GLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVS 398
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL++MY K + EA IF + K+I SWN+++ + Q + L+LF M +
Sbjct: 399 NALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLK 457
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD VT + VLPAC+ LAAL GR+IHG+I+ G D+ + AL+DMY KCG
Sbjct: 458 PDDVTMACVLPACAGLAALEKGREIHGHILRKGY--------FSDLHVACALVDMYVKCG 509
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ AQ +F + KKD+ W +MI GYGM G GKEA+ F M A ++P+E +F +L
Sbjct: 510 LLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILY 569
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+HSG L +G + M+S + P +EHY C++D+L R+G L+ AY+ MP + +
Sbjct: 570 ACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDA 629
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+W LL+ R+H + +LAE A+ +F+LEP + YVL++N+Y K+EEV I+ +
Sbjct: 630 AIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRI 689
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ ++ + GCSWIE++ + F + D SHP+AK I + L LT ++ G
Sbjct: 690 SKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGG 740
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 169/515 (32%), Positives = 266/515 (51%), Gaps = 14/515 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + LQLCA +L+ G+ +HS + G+ + L+ MY C + +F+
Sbjct: 57 LNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFD 116
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +F +N ++S + + + F M++LG+ D YTF C++K V
Sbjct: 117 GI-LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVR 175
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E K++HG V KLG + ++L+ Y KC +E A +F+EL RDVV WN+M++G
Sbjct: 176 ECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCT 235
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G LE F +M G+ + T+ VL A +G GR +H VK G+ GV
Sbjct: 236 MNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVM 295
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
N L+DMY K + A E+F M E I SW SI+ H + G H + LFD M S G
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 355
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD+ ++V+ AC+ +L GR++H +I N + N + ++NALM+MY K
Sbjct: 356 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSN--------LPVSNALMNMYAK 407
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGSM +A ++F+++ K++ SWN MI GY + EAL +F M + +LKPD+VT V
Sbjct: 408 CGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACV 466
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+ L +GRE + R G + ++DM + G L A +L +P +
Sbjct: 467 LPACAGLAALEKGREIHGHI-LRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKK- 524
Query: 512 NPVVWRTLLAASRLH--GNTDLAEIAAQRVFQLEP 544
+ ++W ++A +H G ++ RV +EP
Sbjct: 525 DMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEP 559
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
G VG + + E N+ + + G+ ++L R S + +L T+ +V
Sbjct: 6 GSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSR--SQRSELELNTYCSV 63
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L C+ L +L G+++H I NG+A ID+V + L+ MY CG + + +F
Sbjct: 64 LQLCAELKSLEDGKRVHSIISSNGMA-------IDEV-LGAKLVFMYVNCGDLVKGRRIF 115
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+ + WN+++ Y G +E++ +F M E ++ D TF VL + S
Sbjct: 116 DGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASA 172
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 369 bits (946), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 197/572 (34%), Positives = 336/572 (58%), Gaps = 13/572 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFV 89
+ + ++ L +CA + G++IH Y+++TG+ DS +++ +L+++Y KC +K + V
Sbjct: 108 NMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGL-DSQVTVGNALVDVYGKCGYVKDSRRV 166
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ +S E N ++NA+I+ + L+ F M GV P+ TF ++ ++
Sbjct: 167 FDEIS-ERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKL 225
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
K+IHG + GL+ D+++ +AL++ Y K +A VF ++ +++V WNAMV
Sbjct: 226 FDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVAN 285
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ A+++ R+M +G + T T VL A +GF + G+ +H ++ G
Sbjct: 286 FAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVD 345
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NAL DMY K C+ A +F++ +D S+N ++ + Q N +LRLF M
Sbjct: 346 LFVSNALTDMYAKCGCLNLARRVFKI-SLRDEVSYNILIIGYSQTTNCSESLRLFLEMGI 404
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G + D+V++ V+ AC++LAAL G+++HG V L + +F+ NAL+D Y
Sbjct: 405 KGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTH--------LFIANALLDFY 456
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + A VF ++ +D ASWN MILGYGM G+ A+++F M E ++ D V+++
Sbjct: 457 IKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYI 516
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VLSACSH G + +G+++ M+ + + PT HY C++D+LGRAG + EA +L ++P
Sbjct: 517 AVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPI 575
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + VW LL A R+HG +LA AA+ +F+L+P H G Y ++SN+Y GK++E +
Sbjct: 576 EPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQV 635
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
R M+ + +KNPGCSW+++ + +H F++ +R
Sbjct: 636 RKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/429 (32%), Positives = 235/429 (54%), Gaps = 11/429 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA ++QKG+EIH + + G +L+ Y C +K VF+ + E +
Sbjct: 14 LKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM-LERD 72
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++N++I F + F + + F M + G P+ + ++ C + + ++IH
Sbjct: 73 VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K GLD V +G+ALV+ Y KC +++++ +VF+E+ R+ V WNA++ A +
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQ 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
ALE+FR M G+ + T + +L L+ + F G+ +HG ++ G +S + V NALI
Sbjct: 193 DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALI 252
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K +A +F + EK+I SWN+++ Q + L +M + G P+ V
Sbjct: 253 DMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSV 312
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF+ VLPAC+ + L G++IH + G + D+F++NAL DMY KCG +
Sbjct: 313 TFTNVLPACARIGFLRPGKEIHARAIRTGSSV--------DLFVSNALTDMYAKCGCLNL 364
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF K+S +D S+NI+I+GY E+L +F M +K D V+++GV+SAC++
Sbjct: 365 ARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACAN 423
Query: 458 SGFLSQGRE 466
L QG+E
Sbjct: 424 LAALKQGKE 432
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 10/374 (2%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+GV D +TFP ++K C D ++V + ++IHG+VFKLG D DV++G+ L+ Y C +++
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALI 246
+VF+E+ RDVV WN+++ ++ G + +A+ +F M+ + G + ++ VL
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ GR +H VVK G DS V V NAL+D+YGK V ++ +F+ + E++ SWN+
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
I+T + L +F M+ G +P+ VTFS++LP L G++IHG+ + G
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L D+F+ NAL+DMY K G A VF ++ +K++ SWN M+ + +
Sbjct: 241 LES--------DIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
A+D+ M P+ VTF VL AC+ GFL G+E + R G +
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKE-IHARAIRTGSSVDLFVSNA 351
Query: 487 VIDMLGRAGQLNEA 500
+ DM + G LN A
Sbjct: 352 LTDMYAKCGCLNLA 365
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/578 (35%), Positives = 324/578 (56%), Gaps = 12/578 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++HS +++ G ++ + ++L++MY+KC +++ A F ++S + N ++NAMI+G+
Sbjct: 118 GQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSIS-KHNTVSWNAMINGYA 176
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ M Q G D T+ L+ D ++HG + K GL+L
Sbjct: 177 QAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236
Query: 171 IGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +AL+ +Y KC +++A ++F+ +RD+V WN+++ Y + A ++ M +
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH 296
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK--CVG 287
G ++ T ++SA NGR +HG+V+K G++ VP+ NALI MY K +
Sbjct: 297 GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMK 356
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
EAL IFE +E KD SWNSI+T Q G+ + ++ F M SA D +FS VL +CS
Sbjct: 357 EALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS 416
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
LA G+QIH + GL N F++++L+ MY+KCG + DA+ F + SK
Sbjct: 417 DLATFQLGQQIHVLALKYGLESNE--------FVSSSLIFMYSKCGIIEDARRSFEEASK 468
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+WN ++ GY GQ ALD+F M K+K D +TFV VL+ACSH G + QG +F
Sbjct: 469 NSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKF 528
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L MES YGV P +EHY C +D+ GR+G+L EA L MP + + VW+T L A R G
Sbjct: 529 LRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N +LA A + ++EP YVL+SN+Y +++E ++ M+++ V+K PG SWI
Sbjct: 589 NIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWI 648
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
E+ + +H FI+ D SHP + IY L L + D
Sbjct: 649 EVNNNVHAFIAQDHSHPSCQQIYFLLEVLLEEITRMED 686
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 235/481 (48%), Gaps = 14/481 (2%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
HS ++ G I + +++N Y KC +++ A +F+ + +V ++N MI+G +
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSV-SWNTMIAGHINCGN 79
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
D MR G D+YTF ++K +++H ++ K+G +VY GSA
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC+ +E+A F + + V WNAM+NGYAQ G+ A + M +EG +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T +L L F +HG ++K G + + NALI Y K + +A IF+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 295 MMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+D+ +WNS++ + D +L M GF+PDL ++++++ AC +
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC--GSMRDAQMVFTKMSKKDVA 411
+GR +HG ++ G ++ V ++NAL+ MY K GSM++A +F + KD
Sbjct: 320 NGRSLHGLVIKRGFEQS--------VPISNALISMYLKSDYGSMKEALCIFESLEFKDRV 371
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN ++ G G ++A+ F M A + D +F VL +CS G++ + ++
Sbjct: 372 SWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQ-IHVL 430
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+YG+ + +I M + G + +A + ++ + + W L+ HG ++
Sbjct: 431 ALKYGLESNEFVSSSLIFMYSKCGIIEDARR-SFEEASKNSSITWNALMFGYAQHGQCNV 489
Query: 532 A 532
A
Sbjct: 490 A 490
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 3/188 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ Q GQ+IH L+ G+ + +SLI MYSKC ++ A F S
Sbjct: 410 AVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKN 469
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKK 155
++ T+NA++ G+ + LD F M V D TF ++ C + V + K
Sbjct: 470 SSI-TWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKF 528
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIG 214
+ + G+ + + V+ Y + +EEA + EE+P + D +W + G
Sbjct: 529 LRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCG 588
Query: 215 EFHKALEV 222
A +V
Sbjct: 589 NIELACQV 596
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 202/568 (35%), Positives = 324/568 (57%), Gaps = 16/568 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S ++G+ D+ + ++L++MY+KC +++ A VF+ + E N ++NA+I+G+
Sbjct: 110 GAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMP-ERNTVSWNALIAGYV 168
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + L+ F +M ++PD+ TF L+ D L + ++HG + K G L +
Sbjct: 169 ESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFL-MHQLHGKIVKYGSALGLT 227
Query: 171 IGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +A + Y +C + E+ ++F+++ RD++ WNAM+ Y G + A+ F RM +E
Sbjct: 228 VSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRE 287
Query: 230 -GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
G+ + ++ T ++S + GR +HG+V+K G + PV NALI MY + G C+
Sbjct: 288 SGVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCM 346
Query: 287 GE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
E A + F+ + KD SWNS++T + Q LR F M SA + D FS L +
Sbjct: 347 MEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRS 406
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS LA L GRQIHG I+ +G A N F++++L+ MY+K G + DA+ F +
Sbjct: 407 CSELAVLQLGRQIHGSIIHSGFASNN--------FVSSSLIFMYSKSGILDDAKKSFEEA 458
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K WN MI GY G +F+ M E K+ D VTFVG++++CSH+G + +G
Sbjct: 459 DKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGS 518
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L ME+RYG+ +EHY C +D+ GRAGQL +A EL +MP E + +VW TLL A R+
Sbjct: 519 EILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRI 578
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A + EP Y+L+S++Y G + + ++ M+ + + K PG S
Sbjct: 579 HGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPGWS 638
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAEL 613
WIE+K+ +H+F + DRSHP IY L
Sbjct: 639 WIEVKNEVHSFNAEDRSHPRMDEIYEML 666
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 13/274 (4%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ A +VF+E+P D WN+++ + G A + R M +G+ + F + L +
Sbjct: 41 LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRS 100
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
G + + K G V +AL+ MY K V +A +F+ M E++ SW
Sbjct: 101 AAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSW 160
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA-LMHGRQIHGYIV 363
N+++ + + G L LF M + PD TF+ +L A LMH Q+HG IV
Sbjct: 161 NALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLMH--QLHGKIV 218
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGM 422
G A + ++NA + Y++CG++ +++ +F ++ +D+ SWN M+ Y
Sbjct: 219 KYGSALG--------LTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTY 270
Query: 423 DGQGKEALDMFSCMC-EAKLKPDEVTFVGVLSAC 455
G +A+ F M E+ ++ D +F ++S C
Sbjct: 271 HGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTC 304
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A +F+ + D SWNS++T H G H L M + G + + L +
Sbjct: 41 LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRS 100
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
+ G Q+ +GLA D+VF +AL+ MY KCG +RDA+ VF M
Sbjct: 101 AAAARCPALGAQLQSLAFKSGLA--------DNVFAASALLHMYAKCGRVRDARRVFDGM 152
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+++ SWN +I GY G+ +AL++F M +L PDE TF +L+A S + +
Sbjct: 153 PERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDSNYFLMHQ 212
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++ +YG + I + G L E+ + + + + + W +L A
Sbjct: 213 LHGKIV--KYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTY 270
Query: 526 HG 527
HG
Sbjct: 271 HG 272
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 138/274 (50%), Gaps = 8/274 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKC---CQMKYALFVFNNLSCEPNVFTYNAM 105
+G+ IH +++ G+ + +LI MY++ C M+ A F++L + V ++N+M
Sbjct: 310 HQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTV-SWNSM 368
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLG 164
++G+ ++ + L FF M+ + D+Y F ++ C + +AVL++ ++IHG + G
Sbjct: 369 LTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSE-LAVLQLGRQIHGSIIHSG 427
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ ++ S+L+ Y K +++A K FEE V WN+M+ GYAQ G H +F
Sbjct: 428 FASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFN 487
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M + + + T G++++ G G +++ + + G + +D+YG+
Sbjct: 488 EMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRA 547
Query: 284 KCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ +A E+ + M E D W +++ GN
Sbjct: 548 GQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGN 581
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ C+ LQ G++IH ++ +G + +SLI MYSK + A F
Sbjct: 402 AALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKG 461
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V +N+MI G+ + A FN M +L V D TF LI C V E +I
Sbjct: 462 SSV-PWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEI 520
Query: 157 -HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIG 214
+ + + G+ L + + V+ Y + +E+A ++ + +P D ++W ++ G
Sbjct: 521 LNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHG 580
Query: 215 EFHKALEV 222
A EV
Sbjct: 581 NMELASEV 588
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 337/646 (52%), Gaps = 65/646 (10%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE- 96
+L+ C + + G H + G + +L+ MYS+ ++ A VF+ ++ +
Sbjct: 155 ALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKG 214
Query: 97 -PNVFTYNAMISGFYSNDFAFKGLDFFN------HMRQLGVLPDKYTFPCLIKCCCDVMA 149
+V ++N++++ LD F+ H + D + ++ C + A
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKA 274
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + K+IH + G D ++ +AL++TY KC M++A+ VF + +DVV WNAMV G
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTG 334
Query: 210 YAQIGEFHKALEVFRRMSKEGI------WMS----------------------------- 234
Y Q G+F A E+F+ M KE I W +
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPN 394
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVK------------MGYDSGVPVMNALIDMYGK 282
T+ +LSA +G G H +K G + V NALIDMY K
Sbjct: 395 SVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454
Query: 283 GKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ--PDLVT 338
+ A IF + E+++ +W ++ + Q G+ + L+LF M+S + P+ T
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYT 514
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S +L AC+HL++L G+QIH Y+ + ++ F+ N L+DMY+KCG + A
Sbjct: 515 ISCILMACAHLSSLRMGKQIHAYVTRHHEYESSV------YFVANCLIDMYSKCGDVDTA 568
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF M K++ SW M+ GYGM G+GKEALD+F M +A PD+++F+ +L ACSHS
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + QG ++ +M S YGV+ + +HY CVID+L R+G+L++A++ MP E + +W
Sbjct: 629 GMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVA 688
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+H N +LAE A ++ ++ + G+Y L+SNIY ++++V IR M++ +
Sbjct: 689 LLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGI 748
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCSW++ K G +F DRSHP + IY+ L L R++ G
Sbjct: 749 KKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMG 794
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 188/418 (44%), Gaps = 64/418 (15%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +V +YL C +AL V E + V WN +V + + G +A+ V RM + G
Sbjct: 85 LGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAG 144
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
FT+ L A + +++G HG++ G++S V V NAL+ MY + + +A
Sbjct: 145 TKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDAS 204
Query: 291 EIFEMMEEK---DIFSWNSIMTVHEQCGNHDGTLRLFDRMLS------AGFQPDLVTFST 341
+F+ + K D+ SWNSI+ H + N L LF M + + D+++
Sbjct: 205 LVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVN 264
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC+ L AL ++IH Y + NG D F+ NAL+D Y KCGSM+DA V
Sbjct: 265 ILPACASLKALPQTKEIHSYAIRNG--------TFADAFVCNALIDTYAKCGSMKDAVNV 316
Query: 402 FTKMSKKDVASWNIMILGYGMDGQ-----------------------------------G 426
F M KDV SWN M+ GY G+ G
Sbjct: 317 FNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYG 376
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-----------LPLMESRY 475
+EALD F M +P+ VT + +LSAC+ G LSQG E L
Sbjct: 377 QEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGD 436
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP-NEANPVVWRTLLAASRLHGNTDLA 532
G + + +IDM + A + ++P E N V W ++ +G+++ A
Sbjct: 437 GDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDA 494
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 239/527 (45%), Gaps = 63/527 (11%)
Query: 55 HSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
HSY+ SP S+ T ++ Y C AL V + P V+ +N ++
Sbjct: 77 HSYV-------SPKSLGTGVVASYLACGATSDALSVLERVVPSPAVW-WNLLVRAHIEEG 128
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ + M + G PD +T P +K C ++ + HGL+ G + +V++ +
Sbjct: 129 RLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCN 188
Query: 174 ALVNTYLKCQFMEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKALEVFRRMSK-- 228
ALV Y + +E+A VF+E+ + DV+ WN++V + + AL++F M+
Sbjct: 189 ALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIV 248
Query: 229 -EGIWMSR---FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
E R ++ +L A + + +H ++ G + V NALID Y K
Sbjct: 249 HEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCG 308
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL--------------------- 323
+ +A+ +F +ME KD+ SWN+++T + Q G L
Sbjct: 309 SMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIA 368
Query: 324 --------------FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-- 367
F +M+ G +P+ VT ++L AC+ L AL G + H Y + L
Sbjct: 369 GYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLS 428
Query: 368 --AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMD 423
G D +D+ ++NAL+DMY+KC S + A+ +F + +++ V +W +MI GY
Sbjct: 429 LDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQY 488
Query: 424 GQGKEALDMFSCMCEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
G +AL +FS M + P+ T +L AC+H L G++ + + ++
Sbjct: 489 GDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSV 548
Query: 482 EHYT-CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
C+IDM + G ++ A + +MP N V W ++++ +HG
Sbjct: 549 YFVANCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMHG 594
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 17/214 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI------------TSLINMYSKCC 81
T I+ L CA L +G E H+Y L+ ++ +LI+MYSKC
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456
Query: 82 QMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFP 138
K A +FN++ E NV T+ MI G+ + L F+ M + V P+ YT
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFK-LGLDLDVY-IGSALVNTYLKCQFMEEALKVFEELP 196
C++ C + ++ K+IH V + + VY + + L++ Y KC ++ A VF+ +P
Sbjct: 517 CILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
R+ V W +M++GY G +AL++F +M K G
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 104/208 (50%), Gaps = 35/208 (16%)
Query: 23 NQTFNHPFTLA------TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS--LI 74
++ + P+ +A +CI L CAH ++L+ G++IH+Y+ R +S + + LI
Sbjct: 499 SEMISKPYAVAPNAYTISCI--LMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLI 556
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
+MYSKC + A VF+++ + N ++ +M+SG+ + + LD F+ M++ G +PD
Sbjct: 557 DMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDD 615
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD-LDV------YIGSA-----LVNTYLKC 182
+F L+ C H + GLD D+ I SA +++ +
Sbjct: 616 ISFLVLLYACS-----------HSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARS 664
Query: 183 QFMEEALKVFEELPLR-DVVLWNAMVNG 209
+++A K +E+P+ +W A+++
Sbjct: 665 GRLDKAWKTIQEMPMEPSAAIWVALLSA 692
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 333/592 (56%), Gaps = 12/592 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C ++ G+++H++++++ S +LI+MY+ Q+++A VF + + +
Sbjct: 267 IKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTK-D 325
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ MI+G+ + + L F + RQ P+++ F + C ++ + K++H
Sbjct: 326 LISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVH 385
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G+ K GL +V+ G +L + Y K F+ A F ++ D+V WNA++ +A G+ +
Sbjct: 386 GMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 445
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A++ FR+M G+ T +L GR +H +VK+G+D + V N+L+
Sbjct: 446 EAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLL 505
Query: 278 DMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY K + +AL +F ++ ++ SWN+I++ Q T RL+ M +G +PD
Sbjct: 506 TMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDS 565
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T +T+L C+ L +L G Q+H Y + +GL I DV + N L+DMY KCGS++
Sbjct: 566 ITITTLLGTCAELTSLGVGNQVHCYSIKSGL--------ILDVSVCNGLIDMYAKCGSLK 617
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF D+ SW+ +I+GY G G EAL++F M ++P+EVT++G LSACS
Sbjct: 618 HARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACS 677
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G ME+ +G+ PT EH++C++D+L RAG L+EA +A+ W
Sbjct: 678 HIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAW 737
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLLAA + H N D+AE A + +L+P + V++ NI+ + G +EEV +R M+Q
Sbjct: 738 KTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQM 797
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-DCC 627
V+K PG SWIE+KD H F S D SHP+ IY L L +++ + G D C
Sbjct: 798 GVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPC 849
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 147/510 (28%), Positives = 246/510 (48%), Gaps = 17/510 (3%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F+F + N F P T + + + CA+ +L ++IH ++L++ S + +I
Sbjct: 146 FDFHLKNSNSHFE-PSTYTSLVLA---CANFRSLDYAKKIHDHVLKSNYQPSIILQNHMI 201
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
NMY KC MK A VF+ + PNV ++ +MISG+ N A + + M + G PD+
Sbjct: 202 NMYGKCGSMKDARKVFDTMQL-PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQ 260
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
TF +IK C + +++H V K + +AL++ Y +E A VF
Sbjct: 261 LTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTR 320
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKN 253
+P +D++ W M+ GY Q+G +AL +FR + ++G + + F V SA + +
Sbjct: 321 IPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEY 380
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VHG+ VK G V +L DMY K + A F ++ DI SWN+I+
Sbjct: 381 GKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFAD 440
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G+ + + F +M+ G PD +T+ ++L C L GRQIH YIV G K
Sbjct: 441 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDK---- 496
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGMDGQGKEALDM 432
++ + N+L+ MYTKC + DA VF +S+ ++ SWN ++ Q E +
Sbjct: 497 ----EITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRL 552
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
+ M + KPD +T +L C+ L G + + + G++ + +IDM
Sbjct: 553 YKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQ-VHCYSIKSGLILDVSVCNGLIDMYA 611
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G L A ++ + N + V W +L+
Sbjct: 612 KCGSLKHARDVFDSTQN-LDIVSWSSLIVG 640
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 216/435 (49%), Gaps = 12/435 (2%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+NLS E +Y + + A + DF H++ + T+ L+ C +
Sbjct: 116 IFSNLSKELPTNSYIIFLCKQHHYKEALEAFDF--HLKNSNSHFEPSTYTSLVLACANFR 173
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++ KKIH V K + + + ++N Y KC M++A KVF+ + L +VV W +M++
Sbjct: 174 SLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMIS 233
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+Q G+ + A+ ++ +M++ G + + T V+ A + G GR +H V+K +
Sbjct: 234 GYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGH 293
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ NALI MY + A +F + KD+ SW +++T + Q G L LF +L
Sbjct: 294 HLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLL 353
Query: 329 SAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +QP+ F +V ACS L L +G+Q+HG V GL +N VF +L D
Sbjct: 354 RQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRN--------VFAGCSLCD 405
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G + A+M F ++ D+ SWN +I + +G EA+D F M L PD +T
Sbjct: 406 MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSIT 465
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
++ +L C L+QGR+ + + G I ++ M + L++A + +
Sbjct: 466 YISLLCTCGSPVRLNQGRQIHSYI-VKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDI 524
Query: 508 PNEANPVVWRTLLAA 522
AN V W +L+A
Sbjct: 525 SRNANLVSWNAILSA 539
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 7/288 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L C L +G++IHSY+++ G SL+ MY+KC + AL VF ++
Sbjct: 465 TYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDI 524
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S N+ ++NA++S + + M G PD T L+ C ++ ++
Sbjct: 525 SRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVG 584
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H K GL LDV + + L++ Y KC ++ A VF+ D+V W++++ GYAQ
Sbjct: 585 NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQC 644
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G H+AL +FR M+ G+ + T G LSA +G + G R+ + + G
Sbjct: 645 GLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREH 704
Query: 273 MNALIDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHD 318
+ ++D+ + C+ EA E F + DI +W +++ C H+
Sbjct: 705 FSCIVDLLARAGCLHEA-ETFIQKSGLDADITAWKTLLAA---CKTHN 748
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 320/591 (54%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L KG ++HS+ ++ G+ + SL+++YSKC ++ A F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N+ +N M+ + D + F M+ G++P+++T+P +++ C + A+
Sbjct: 424 ETE-NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G L+VY+ S L++ Y K + AL++ LP DVV W AM+ GY Q
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +AL++F M GI +SA + + G+ +H G+ + + +
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 602
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI +Y + + EA FE + +K+ SWNS+++ Q G + L++F RML +
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
++ T+ + + A + LA + G+QIH ++ G ++N+L+ +Y K G
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE--------VSNSLISLYAKSG 714
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA F MS+++V SWN MI GY G G EAL +F M + P+ VTFVGVLS
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G ++ M + +VP EHY CV+D+LGRAGQL+ A E MP A+
Sbjct: 775 ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++WRTLL+A +H N ++ E AA + +LEP YVL+SNIY ++ R M
Sbjct: 835 MIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLM 894
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + V+K PG SWIE+K+ +H F + D+ HP IY + L R E G
Sbjct: 895 KDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIG 945
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIAS---LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
F ++ F P+ L++ +++ +QL + G+++H +++ G L
Sbjct: 249 FCDMHASEIFPTPYVLSSVLSASTKIQL------FELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ +YS+ ++ A +F+ ++ V +YN++ISG F+ + L+ F M++ + PD
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGV-SYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
T L+ C V A+ + ++H K G+ D+ + +L++ Y KC +E A K F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++VLWN M+ Y Q+ + E+FR+M EG+ ++FT +L +G
Sbjct: 422 TTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +H V+K G+ V V + LIDMY K + AL I + E D+ SW +++ + Q
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
L+LF+ M G Q D + F++ + AC+ + AL G+QIH G
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA---- 597
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D+ +NNAL+ +Y +CG +++A + F K+ K+ SWN ++ G G +EAL +F
Sbjct: 598 ----DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + + + T+ +SA + + QG++ + M + G E +I + +
Sbjct: 654 VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+G +++A+ M +E N + W ++ HG
Sbjct: 713 SGSISDAWREFNDM-SERNVISWNAMITGYSQHG 745
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 246/494 (49%), Gaps = 22/494 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L + +H + ++G PL I SL++ Y + A+ VF+ S +
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS-NRS 123
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD-VMAVLEVKKIH 157
VF++N MI F + F+ F M G+ P+ YTF ++K C +A VK++H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
F G D + + L++ Y K ++E A KVF + ++D+V W AM++G +Q G
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +F M I+ + + ++ VLSA + F+ G +H +V+K G+ S V N L+
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y + + + A IF M +D S+NS+++ Q G D L LF +M +PD +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +++L AC+ + AL G Q+H + + G++ D+ + +L+D+Y+KC +
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSA--------DIILEGSLLDLYSKCADVET 415
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F +++ WN+M++ YG ++ ++F M + P++ T+ +L C+
Sbjct: 416 AHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 458 SGFLSQGREFLPLMESRYGVVPT---IEHYTC--VIDMLGRAGQLNEAYELALAMPNEAN 512
G L G + V+ T + Y C +IDM + GQL A + +P E +
Sbjct: 476 LGALYLGEQI------HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDD 528
Query: 513 PVVWRTLLAASRLH 526
V W ++A H
Sbjct: 529 VVSWTAMIAGYVQH 542
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/593 (25%), Positives = 265/593 (44%), Gaps = 28/593 (4%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+++HS G SPL LI++YSK ++ A VFN + C ++ T+ AMISG
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI-CMKDIVTWVAMISGLSQ 238
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N + + F M + P Y ++ + +++H LV K G + Y+
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ LV Y + + + A ++F + RD V +N++++G Q G +ALE+F +M ++ +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
TV +LSA +G G +H +K G + + + +L+D+Y K V A +
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHK 418
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E ++I WN ++ + Q N + +F +M G P+ T+ ++L C+ L A
Sbjct: 419 FFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH +++ G N V++ + L+DMY K G + A + ++ + DV
Sbjct: 479 LYLGEQIHTHVIKTGFQLN--------VYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY EAL +F M ++ D + F +SAC+ L QG++ +
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQ 589
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + +I + R G++ EAY LA + N + W +L++ G +
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAY-LAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
A R+ + E N++ G N+++ + LK
Sbjct: 649 ALQVFVRMLRTEAE--------VNMFTYGSAISA------AASLANIKQGQQIHSMVLKT 694
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKH 644
G + S S+YA+ S++ RE D + ++ +G+ +H
Sbjct: 695 G---YDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQH 744
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 199/423 (47%), Gaps = 12/423 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K + N M + GV + + L++ C ++ E ++H + K G D + + +LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y + A+KVF+E R V WN M++ + + +FRRM EGI + +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 237 TVTGVLSALIMMGF-FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T GVL A + F + VH G+DS V N LID+Y K + A ++F
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ KDI +W ++++ Q G + + LF M ++ P S+VL A + + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
Q+H ++ G + ++ N L+ +Y++ + A+ +F+ M+ +D S+N
Sbjct: 281 EQLHCLVIKWGFHS--------ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I G G AL++F+ M LKPD +T +LSAC+ G L +G + L +
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKA 391
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA-SRLHGNTDLAEI 534
G+ I ++D+ + + A++ L E N V+W +L A +L +D EI
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 535 AAQ 537
Q
Sbjct: 451 FRQ 453
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 200/603 (33%), Positives = 345/603 (57%), Gaps = 18/603 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PFT ++ L + A Q + GQ +H+ ++ G + SL+NMY+KC ++
Sbjct: 154 WPNPFTFSSV---LSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF + ++ ++N +++G N + L F+ R + + T+ +I C
Sbjct: 211 ARVVFCRMETR-DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCA 269
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWN 204
++ + +++H V K G + +AL++ Y K +++AL VF + ++VV W
Sbjct: 270 NLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWT 329
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM++G Q G+ A +F RM ++G+ + T + +L+ + F +H V+K
Sbjct: 330 AMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT--VSEASFPPQ--IHAQVIKT 385
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y+ V AL+ Y K EAL IF+M+++KD+ SW++++T + Q G+ +G F
Sbjct: 386 NYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAF 445
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMH-GRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+M G +P+ T S+ + AC+ AA + GRQ H + + C D + +++
Sbjct: 446 IKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKH------RCHDA--LCVSS 497
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY + GS+ +AQ VF + + +D+ SWN M+ GY G ++ALD+F M +
Sbjct: 498 ALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDM 557
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D +TF+ V+ C+H+G + +G+++ LM YG+ PT++HY C++D+ RAG+L+E L
Sbjct: 558 DGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSL 617
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A P +WR LL A R+H N +L ++AA+++ LEP YVL+SNIY A GK+
Sbjct: 618 IEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKW 677
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+E ++R M + VRK GCSWI++K+ +H FI+SD+SHP ++ IYA+L ++TA+L++
Sbjct: 678 KEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQE 737
Query: 624 GDC 626
G C
Sbjct: 738 GYC 740
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 200/410 (48%), Gaps = 17/410 (4%)
Query: 114 FAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL-DVYI 171
F + LD F + R+ G +IK C V + K++H L + G D D+ +
Sbjct: 34 FVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRV 93
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G++LV+ Y+ + + KVFE + R+VV W +++ GY Q G + +F RM EG+
Sbjct: 94 GTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGV 153
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
W + FT + VLS + G G+ VH +K G S V V N+L++MY K V EA
Sbjct: 154 WPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARV 213
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F ME +D+ SWN++M G L+LF S+ T+STV+ C++L
Sbjct: 214 VFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKH 273
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDV 410
L RQ+H ++ +G G+ + ALMD Y K G + A VF MS ++V
Sbjct: 274 LGLARQLHSSVLKHGFHSYGN--------VMTALMDAYNKAGQLDKALDVFLLMSGSQNV 325
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW MI G +G A +FS M E + P+++T+ +L+ S + F Q +
Sbjct: 326 VSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV-SEASFPPQIHA--QV 382
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+++ Y PT+ T ++ + EA + M ++ + V W +L
Sbjct: 383 IKTNYECTPTVG--TALMVSYSKLCSTEEALSI-FKMIDQKDVVSWSAML 429
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 228/497 (45%), Gaps = 18/497 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
+++C + G+++H+ +R G + + TSL++MY + VF + +
Sbjct: 62 IKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM-LKR 120
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV T+ ++++G+ + F MR GV P+ +TF ++ V + +H
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G V++ ++L+N Y KC +EEA VF + RD+V WN ++ G G
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDL 240
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++F ++ T + V++ + R +H V+K G+ S VM AL+
Sbjct: 241 EALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALM 300
Query: 278 DMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
D Y K + +AL++F +M +++ SW +++ Q G+ LF RM G P+
Sbjct: 301 DAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPND 360
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T+ST+L ++ QIH ++ N C + ALM Y+K S
Sbjct: 361 LTYSTILT----VSEASFPPQIHAQVI----KTNYECTPT----VGTALMVSYSKLCSTE 408
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC- 455
+A +F + +KDV SW+ M+ Y G A + F M LKP+E T + AC
Sbjct: 409 EALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACA 468
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S + + GR+F + ++ + + ++ M R G + A + + + +
Sbjct: 469 SPAAGVDLGRQFHAI-SIKHRCHDALCVSSALVSMYARKGSIENA-QCVFERQTDRDLLS 526
Query: 516 WRTLLAASRLHGNTDLA 532
W ++L+ HG + A
Sbjct: 527 WNSMLSGYAQHGYSQKA 543
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 334/594 (56%), Gaps = 18/594 (3%)
Query: 32 LATCIASLQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
LAT S+ C H+ ++ S ++ +G+ ++ ++ +K + Y L +F
Sbjct: 4 LATLRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSATK--DLGYTLLLF 61
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L+ P +F +N +I GF ++ L ++ +R GV+PD++TFP L+K +
Sbjct: 62 DRLA-TPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNE 120
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + + K GLD D ++ ++LV+ + C +++ + ++F E +DVV W A++NG
Sbjct: 121 -NPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGC 179
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG---YD 267
+ G +ALE F M G+ + T+ VL A M+ GR VHG V+ G +D
Sbjct: 180 LRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWD 239
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V +AL+DMY K +A+++F M +++ SW +++ + QC + L++F M
Sbjct: 240 --VYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G +P+ T ++ L AC+ L +L GR +H Y+ + L N + AL+D
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSK--------LGTALVD 349
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+KCG + +A +VF K+ KDV W MI G M G +L++FS M ++++P+ VT
Sbjct: 350 MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVT 409
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVLSAC+H G + +G E LM Y + P ++HY C++D+LGRAG+L EA + +M
Sbjct: 410 FLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESM 469
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E P VW L + +H +L E + +L+P H G Y+L++N+Y K+E
Sbjct: 470 PMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++R M+ + V K+PGCSWIE+ +H FI+ D+SH E+ ++Y L S++A+L+
Sbjct: 530 NVRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINVYMMLESVSAQLK 583
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 327/574 (56%), Gaps = 17/574 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T LI Y + A +F+ + +V + +MI+G+ S + + + F +M + GV
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMP-HRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGV 103
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD-LDVYIGSALVNTYLKC-QFMEEA 188
P+ +T ++K C + A+L K +HGL K+G +Y+ +AL++ Y C M+ A
Sbjct: 104 KPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNA 163
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
VFE++ ++ V W ++ GY + L VFR+M E +S F+ + +SA +
Sbjct: 164 RLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASI 223
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G G+ VH V+ G++S +PVMNA++DMY + +C EA ++F M +KD +WN+++
Sbjct: 224 GSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLI 283
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
E +++ +L +F +M+S GF P+ TF++V+ AC++LA L G+Q+HG I+ GL
Sbjct: 284 AGFETLDSYE-SLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLD 342
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
N + ++NAL+DMY KCG++ D+ +F+ M ++ SW M++GYG G GKE
Sbjct: 343 NN--------LELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKE 394
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+D+F+ M + +KPD++ F+ VLSACSH+G + +G + LM S Y V P + Y CV+
Sbjct: 395 AVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVV 454
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+L RAG++ EAYEL MP + + +W LL A + + + ++AA +V +++P G
Sbjct: 455 DLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAG 514
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
YVL+SN A G + + +R MR +K G SWIELK+ + +FI D K
Sbjct: 515 TYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKE 574
Query: 609 IYAELHSLTARLREHGDCCAGTLFDSDSTASGFE 642
+ L L +++ AG + D D +A E
Sbjct: 575 VCEVLELLIRHMKD-----AGYVLDLDCSAHDLE 603
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 134/272 (49%), Gaps = 6/272 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF+ + +++ CA + G+++H+ ++ G + + ++++MY +C A
Sbjct: 210 PFSFSIAVSA---CASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQ 266
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F ++ + + T+N +I+GF + D +++ L F+ M G P+ +TF +I C ++
Sbjct: 267 LFGEMT-QKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACANLA 324
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++HG + GLD ++ + +AL++ Y KC + ++ K+F + ++V W +M+
Sbjct: 325 ILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMI 384
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYD 267
GY G +A+++F M GI + VLSA G G R +
Sbjct: 385 GYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVA 444
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ + V EA E+ E M K
Sbjct: 445 PDRDIYACVVDLLSRAGRVKEAYELIENMPFK 476
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 94/182 (51%), Gaps = 10/182 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT + IA+ CA+ L GQ++H ++ G+ ++ +LI+MY+KC + + +
Sbjct: 311 FTFTSVIAA---CANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKI 367
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N+ ++ +M+ G+ ++ + +D FN M G+ PDK F ++ C
Sbjct: 368 FSGMR-HTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGL 426
Query: 150 VLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
V E + L+ + + D D+Y + +V+ + ++EA ++ E +P + D +W A
Sbjct: 427 VDEGLRYFRLMTSYYNVAPDRDIY--ACVVDLLSRAGRVKEAYELIENMPFKPDESIWVA 484
Query: 206 MV 207
++
Sbjct: 485 LL 486
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 218/616 (35%), Positives = 335/616 (54%), Gaps = 30/616 (4%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
P S+ NF T H TL + SL NL K +IH+ ML I
Sbjct: 16 PLSN-LNFQTQK-----EHHQTLTEKLLSLIKQCKSKNLLK--QIHAQMLINSIPKPNFL 67
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF----FNHM 125
++ +I++ + YA VFN L+ +PN++ +N M+ G + +K DF + +
Sbjct: 68 LSKIIDLK----DLAYASLVFNQLT-KPNIYAFNVMLRGLAT---TWKKYDFCVELYYKL 119
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
+ LG+ + +T+P L C +V ++ K H LVFK GLD D Y+ +L+ Y +C M
Sbjct: 120 KSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEM 179
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
A KVF+E+ RD+V WN+M++GY+++G +A+ +F M +EG T+ VL A
Sbjct: 180 GFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGAC 239
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+G GR V G V++ + + +ALIDMYGK + A +F+ M KD+ +WN
Sbjct: 240 GDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWN 299
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
+I+T + Q G + + LF+ M AG PD VT VL ACS + AL G+ + +
Sbjct: 300 AIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEK 359
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GL DV++ +AL+DMY KCGS+ DA VF M K+ SWN MI GQ
Sbjct: 360 GLQH--------DVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQ 411
Query: 426 GKEALDMFSCMCE--AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+EAL +F M + ++P+++TF+GVLSAC H+G + +GR+ M +G+VP +EH
Sbjct: 412 AQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEH 471
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
Y+C++D+ RAG L EA++L MP + + +V +LL A + N D+ E Q ++E
Sbjct: 472 YSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEME 531
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
+ GNYV+ S IY ++++ +R MRQ V K PGCSWI++ +H F + D H
Sbjct: 532 LSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLH 591
Query: 604 PEAKSIYAELHSLTAR 619
+ +IY L+ R
Sbjct: 592 NHSMNIYQLLNEEMKR 607
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 325/571 (56%), Gaps = 11/571 (1%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
L + I+ L + A + + + IH Y ++ G+ + +L++ Y KC +K VF
Sbjct: 111 NLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVF 170
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + E N ++N++I+G + L+ F M G P+ T ++ ++
Sbjct: 171 NE-TVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECF 229
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K+IHG ++G + D++I ++L++ Y K EA +F L R++V WNAM+ Y
Sbjct: 230 KAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANY 289
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A +A+ +M + G + T T VL A +GF G+ +H + V++G S +
Sbjct: 290 ALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDL 349
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LIDMY K C+ A +F KD S+N ++ + + + +L LF M
Sbjct: 350 FVSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLL 408
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +PD+V+F V+ AC++LAAL G+++HG + N L + +F++N+L+D YT
Sbjct: 409 GKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSH--------LFVSNSLLDFYT 460
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG + A +F ++ KDVASWN MILGYGM G+ + A+ MF M + ++ D V+++
Sbjct: 461 KCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIA 520
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G + +G ++ M ++ + PT HYTC++D+LGRAG + EA +L +P
Sbjct: 521 VLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIA 579
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ +W LL A R++GN +L AA+ +F+L+P HCG Y+L+SNIY G+++E IR
Sbjct: 580 PDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIR 639
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
M+ + +KNPGCSW+++ D +H F++ +R
Sbjct: 640 ELMKSRGAKKNPGCSWVQIYDQVHAFVAEER 670
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 232/446 (52%), Gaps = 16/446 (3%)
Query: 22 GNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC 81
G Q +H F L+LC+ ++ KG E+H + + G +L+ +Y C
Sbjct: 5 GVQLDDHTFPFV-----LKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCG 59
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCL 140
+ A +F+ + E +V ++N +I N + +++ M V+ P+ + L
Sbjct: 60 FLNDARRLFDEMP-ERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISL 118
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ + ++IH K+GLD V +ALV+ Y KC ++ +VF E ++
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V WN+++NG A G AL FR M G + T++ +L L+ + FK G+ +HG
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++MG ++ + + N+LIDMY K EA IF ++ ++I SWN+++ +
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
+R +M G P+ VTF+ VLPAC+ L L G++IH V GL D+F
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTS--------DLF 350
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
++N+L+DMY KCG + A+ VF S+KD S+NI+I+GY ++L++FS M
Sbjct: 351 VSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 409
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGRE 466
KPD V+FVGV+SAC++ L QG+E
Sbjct: 410 KKPDVVSFVGVISACANLAALKQGKE 435
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 198/379 (52%), Gaps = 14/379 (3%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + GV D +TFP ++K C D + + ++HG+VFKLG D DVY+G+ L+ Y C F
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ +A ++F+E+P RDVV WN ++ + G++ +A + M + + + V+S
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSV--IKPNLVSVISL 118
Query: 245 LIMMGFFKN---GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L + ++ R +H VK+G DS V NAL+D YGK V ++F EK+
Sbjct: 119 LPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SWNSI+ G L F M+ AG QP+ VT S++LP L G++IHG+
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ G D+F+ N+L+DMY K G +A +F + ++++ SWN MI Y
Sbjct: 239 SMRMGTET--------DIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA 290
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
++ EA+ M E P+ VTF VL AC+ GFL G+E + M R G+ +
Sbjct: 291 LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKE-IHAMGVRIGLTSDL 349
Query: 482 EHYTCVIDMLGRAGQLNEA 500
+IDM + G L+ A
Sbjct: 350 FVSNSLIDMYAKCGCLHSA 368
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 202/579 (34%), Positives = 314/579 (54%), Gaps = 35/579 (6%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S +L++ +++ + A +F+ + +P+ +YNA+I+ + L F M
Sbjct: 827 FSYNALLSAHARLGRPADARALFHAIP-DPDQCSYNAVIAALAQHSRGADALLFLAAMHA 885
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ + Y+F + C ++H LV K DVYIGSAL++ Y KC++ EE
Sbjct: 886 DDFVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEE 945
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VFE +P R++V WN+++ Y Q G +AL +F M K G T+ V+SA
Sbjct: 946 ARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAG 1005
Query: 248 MGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGK------GKCV-------------- 286
+ + GR VH VVK + + + NAL+DMY K +CV
Sbjct: 1006 LAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETS 1065
Query: 287 -----------GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+A +F M EK++ +WN ++ + Q G + LRLF R+ P
Sbjct: 1066 LITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPT 1125
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T+ VL AC ++A L G+Q H +++ G + + DVF+ N+L+DMY K GS+
Sbjct: 1126 HYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPES--DVFVGNSLVDMYLKTGSI 1183
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D VF +M+ +D SWN MI+G+ +G+ K+AL +F M +K PD VT +GVLSAC
Sbjct: 1184 DDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSAC 1243
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
HSG + +GR + M +G++P+ +HYTC+ID+LGRAG L E EL M E + V+
Sbjct: 1244 GHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVL 1303
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LL + RLH N ++ E AA ++F+L+P + G YVL+SN+Y GK+ +V +R +M+
Sbjct: 1304 WASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKH 1363
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
+ V K PGCSWIE+ + F++ D HP I+A L
Sbjct: 1364 RGVSKQPGCSWIEIGRKVSVFLARDNGHPCKNEIHAILR 1402
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 264/545 (48%), Gaps = 44/545 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L CA +L +++H ++ + + + T+L+++Y C + A F++
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ EPN ++N ++ ++ +D F M GV P YT + C D A+ E
Sbjct: 212 I-LEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEE 270
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL---------- 202
+ IH V + G + V++ S++V+ Y KC M+ A +F P++D+V+
Sbjct: 271 GRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLAS 330
Query: 203 ---------------------WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
WNAM+ GY + + AL +F++M +E T+ V
Sbjct: 331 CGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSV 390
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV--GEALEIFEMMEEK 299
LSA + G VH +K G+ S + NAL+ MY K C+ E L +FEM E+
Sbjct: 391 LSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSER 450
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D +SWNS+++ +E+ + L +M S P+ TFS+ L AC+++ L G QIH
Sbjct: 451 DSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIH 509
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
Y++ G +IDD+ + + L+DMY KC + +F +DV WN MI G
Sbjct: 510 AYMIRKGY-------EIDDI-LRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFG 561
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G+G+ LD+F M + +K D VTF+G L +C G + GR + LM ++P
Sbjct: 562 CAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIP 620
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
IEHY C+I++LG+ G + E + MP E +W + R +GN L E AA+ +
Sbjct: 621 RIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCI 680
Query: 540 FQLEP 544
P
Sbjct: 681 NDSNP 685
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/453 (24%), Positives = 220/453 (48%), Gaps = 44/453 (9%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++NA+I+ + L F++M LG+ P T ++ CC + + + +++HG +
Sbjct: 118 SWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHI 177
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K +V +G+ALV+ Y C + +A + F+++ + + WN +V Y G A+
Sbjct: 178 AKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAV 237
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
++F RM G+ +TV+ + A + GR +H V++ GY+ V V ++++DMY
Sbjct: 238 DMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMY 297
Query: 281 GK-----------------------------GKC--VGEALEIFEMMEEKDIFSWNSIMT 309
K C + +A +FE M+E+++ SWN+++T
Sbjct: 298 AKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLT 357
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ + + G L LF +M + D +T +VL AC+ + + G ++H + +
Sbjct: 358 GYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAI------ 411
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQ--MVFTKMSKKDVASWNIMILGYGMDGQGK 427
C + NAL+ MY+KCG +R A+ ++F S++D SWN +I GY +
Sbjct: 412 --KCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSE 469
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
AL + M ++++ P++ TF L+AC++ L QG + M + + I + +
Sbjct: 470 AALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR-SVL 527
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
IDM + Q + + + A P+ + ++W +++
Sbjct: 528 IDMYCKCRQFDYSIRIFEARPSR-DVILWNSMI 559
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 179/384 (46%), Gaps = 31/384 (8%)
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ + C + +A ++F+ +PLRD WNA++ ++ G +AL +F M+ GI
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ VLS R +HG + K + S V + AL+D+YG + +A F+
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ E + SWN I+ + G D + +F RMLSAG +P T S + AC AL G
Sbjct: 212 ILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEG 271
Query: 356 RQIHGYI--------------VVNGLAKNGS---------CKDIDDVFMNNALMDMYTKC 392
R IH ++ VV+ AK G+ + D+ M+ +++ C
Sbjct: 272 RCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASC 331
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGY--GMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
G + DA+ VF M ++++ SWN M+ GY MD G AL +F M + + D +T
Sbjct: 332 GRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTG--ALLLFQQMRQETREFDAITLGS 389
Query: 451 VLSACSHSGFLSQGR-EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL-AMP 508
VLSAC +G L G+ E + + G + ++ M + G L A L L M
Sbjct: 390 VLSAC--TGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMG 447
Query: 509 NEANPVVWRTLLAASRLHGNTDLA 532
+E + W +L++ H ++ A
Sbjct: 448 SERDSYSWNSLISGYERHSMSEAA 471
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 5/291 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA--L 87
F T + L C ++ KG+E+H++ ++ G SP+ +L+ MYSKC ++ A L
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F + E + +++N++ISG+ + + L M Q V P++ TF + C ++
Sbjct: 442 LLFE-MGSERDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANI 499
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + +IH + + G ++D + S L++ Y KC+ + ++++FE P RDV+LWN+M+
Sbjct: 500 FLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMI 559
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G A G+ L++F M K+GI T G L + I G + GR +++
Sbjct: 560 FGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESII 619
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNH 317
+ +I++ GK C+ E + E M E W I + GN
Sbjct: 620 PRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNR 670
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
S +S TSLI Y++ ++ A VF+ + E NV +N +I+ + N + L F +
Sbjct: 1059 SVVSETSLITGYARSANVEDAQMVFSQM-VEKNVIAWNVLIAAYAQNGEEEEALRLFVRL 1117
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH------GLVFKLGLDLDVYIGSALVNTY 179
++ V P YT+ ++ C +V + ++ H G F G + DV++G++LV+ Y
Sbjct: 1118 KRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMY 1177
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM--SKEGIWMSRFT 237
LK +++ KVFE + RD V WNAM+ G+AQ G AL +F RM SKE T
Sbjct: 1178 LKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESP--DSVT 1235
Query: 238 VTGVLSALIMMGFFKNGRVV-------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ GVLSA G + GR HGI+ + +ID+ G+ + E
Sbjct: 1236 MIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDH------YTCMIDLLGRAGHLKEVE 1289
Query: 291 EIF-EMMEEKDIFSWNSIM 308
E+ EM E D W S++
Sbjct: 1290 ELIKEMSMEPDAVLWASLL 1308
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 16/271 (5%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ N I+ V +A E+F++M +D SWN+I+T + G+ L LF M S G
Sbjct: 87 LFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLG 146
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P T ++VL C+ L RQ+HG+I N V + AL+D+Y
Sbjct: 147 IRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSN--------VILGTALVDVYGN 198
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C + DA+ F + + + SWN+++ Y + G G A+DMF M A ++P T
Sbjct: 199 CFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHA 258
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+ AC + L +GR + R+G + + V+DM + G ++ A L P +
Sbjct: 259 VLACRDNNALEEGRCIHAFV-LRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMK- 316
Query: 512 NPVVWRTLLAASRLHGNTDLAEIA-AQRVFQ 541
+++ S + G IA A+RVF+
Sbjct: 317 -----DMVMSTSIVSGLASCGRIADAKRVFE 342
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 149/340 (43%), Gaps = 47/340 (13%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM---- 327
++N L+ Y + + +A +F+ + + FS+N++++ H + G LF +
Sbjct: 797 LLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPD 856
Query: 328 -----------------------LSAGFQPDLV----TFSTVLPACSHLAALMHGRQIHG 360
L+A D V +F++ L AC+ G Q+H
Sbjct: 857 QCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHA 916
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
+ + AK DV++ +AL+DMY KC +A+ VF M ++++ SWN +I Y
Sbjct: 917 LVSKSPHAK--------DVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCY 968
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+G EAL +F M +A PDEVT V+SAC+ +GR+ +
Sbjct: 969 EQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRED 1028
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA-AQRV 539
+ ++DM + G+ A + M + + VV T L + G A + AQ V
Sbjct: 1029 MVLSNALVDMYAKCGRTRAARCVFDRMASRS--VVSETSL----ITGYARSANVEDAQMV 1082
Query: 540 F-QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
F Q+ + + ++ Y G+ EE L + +++++V
Sbjct: 1083 FSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESV 1122
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 327/584 (55%), Gaps = 40/584 (6%)
Query: 67 PLSITSLI--NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
P S T L+ N+Y C + ++ + C+ + YN I F + ++ N
Sbjct: 36 PSSKTPLVSSNLYHSCATIGTSVLPSETIDCK--ITDYNIEICRFCELGNLRRAMELINQ 93
Query: 125 MRQLGVLPDK--YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
+ PD T+ +++ C D+ ++ + ++IH ++ +++D +GS LV Y+ C
Sbjct: 94 SPK----PDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI--------WMS 234
+ E ++F+++ V LWN ++NGYA+IG F ++L +F+RM + GI
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFD 209
Query: 235 RFTVTGVLSALIMM-GFFKNGRVVHGI-----VVKMGYDSGVPVM--------NALIDMY 280
V+S M+ G+ NG G+ ++ +G ++ + M N L+DMY
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMY 269
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + A+++FE M E+ + SW S++ + + G D ++RLF M P+ +T +
Sbjct: 270 SKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMA 329
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+LPAC+ LAAL G++IHG+I+ NG + D + NAL+DMY KCG++ A++
Sbjct: 330 CILPACASLAALERGQEIHGHILRNGFSL--------DRHVANALVDMYLKCGALGLARL 381
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F + +KD+ SW +MI GYGM G G EA+ F+ M + ++PDEV+F+ +L ACSHSG
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
L +G F +M + + P EHY C++D+L RAG L++AY+ MP E + +W LL
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALL 501
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
R++ + LAE A+ VF+LEP + G YVL++NIY K+EEV +R + ++ +RK
Sbjct: 502 CGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRK 561
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
NPGCSWIE+K +H F++ D SHP A I L R++E G
Sbjct: 562 NPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEG 605
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 193/447 (43%), Gaps = 85/447 (19%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCC 81
NQ+ L T + LQLCA ++Q G+ IHS + + +D L + L+ MY C
Sbjct: 92 NQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG-SKLVFMYVTCG 150
Query: 82 QMKYALFVFNNLSCEP-------------------------------------------- 97
++ +F+ ++ E
Sbjct: 151 DLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDE 210
Query: 98 ----NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N+MISG+ SN + KGLD F M LG+ D T
Sbjct: 211 LGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATM---------------- 254
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +++ + + L++ Y K + A++VFE + R VV W +M+ GYA+
Sbjct: 255 -----------VSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYARE 303
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G ++ +F M KE ++ + T+ +L A + + G+ +HG +++ G+ V
Sbjct: 304 GLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 363
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+DMY K +G A +F+M+ EKD+ SW ++ + G + F+ M ++G +
Sbjct: 364 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 423
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V+F ++L ACSH L G G+ + +N C + ++D+ + G
Sbjct: 424 PDEVSFISILYACSHSGLLDEG---WGFF---NMMRNNCCIEPKSEHY-ACIVDLLARAG 476
Query: 394 SMRDAQMVFTKMS-KKDVASWNIMILG 419
++ A M + D W ++ G
Sbjct: 477 NLSKAYKFIKMMPIEPDATIWGALLCG 503
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 322/574 (56%), Gaps = 9/574 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
+++H ++T ID +SL+N Y K + A +F+ + E N+ ++ MISG+
Sbjct: 131 ARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMP-ERNLVSWTTMISGYA 189
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
S A + L F MR + +++ F ++ V K++H +V K G+ V
Sbjct: 190 SKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVS 249
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +ALV Y KC + +L +FE ++ + W+A++ GY+Q G+ HKAL++F +M G
Sbjct: 250 VLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAG 309
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT+ GVL A + + G+ HG ++K GY++ + AL+DMY K G+A
Sbjct: 310 FVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDAR 369
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ F+ + E D+ W SI+ + Q G ++ L ++ RM P+ +T ++VL ACS+LA
Sbjct: 370 KGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLA 429
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH + GL ++ + +AL MY KCGS+ + ++F +M ++D+
Sbjct: 430 ALEQGKQIHARTIKYGLG--------PELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDI 481
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI G +G G+EAL++F M KPD +TFV VLSACSH G + +G + +
Sbjct: 482 VSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNM 541
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M + +VP +EHY C++D+L RAG+LNEA E + + +WR LL A R H N +
Sbjct: 542 MFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYE 601
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L A +++ +L YVL+S+IY A G+ +V+ +R M+ + VRK GCSWIELK
Sbjct: 602 LGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELK 661
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+ D+ HP+ + I + L +++ G
Sbjct: 662 SHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDG 695
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 168/512 (32%), Positives = 267/512 (52%), Gaps = 21/512 (4%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEPNVFT 101
A Q +L+KGQ +H+++++ + S + + LI Y+KC + A VF NL NV +
Sbjct: 18 ADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLK-HKNVVS 76
Query: 102 YNAMISGFYSNDFAFKG----LDFFNHMRQLGVLPDKYTFPCLIKCCC-DVMAVLEVKKI 156
YN +I G N KG L+ F M +LPD +TFP + ++ + +++
Sbjct: 77 YNCLIHGLSHN--GSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQV 134
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L K DV++GS+LVN Y K + EA K+F+ +P R++V W M++GYA
Sbjct: 135 HVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMA 194
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL VF M ++ F T VLSAL+ F +G+ VH +VVK G V V+NAL
Sbjct: 195 KEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNAL 254
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY K + +L +FEM +K+ +W++++T + Q G+ L+LF +M AGF P
Sbjct: 255 VTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSE 314
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T VL ACS +AA+ G+Q HGY++ +G ++ AL+DMY K G
Sbjct: 315 FTLVGVLKACSDVAAIEEGKQTHGYLLKSGYE--------TQIYTATALVDMYAKFGFTG 366
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA+ F + + D+ W +I GY +G+ +EAL M+ M K+ P+E+T VL ACS
Sbjct: 367 DARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACS 426
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+ L QG++ + +YG+ P + + + M + G L E + M + + V W
Sbjct: 427 NLAALEQGKQ-IHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRML-QRDIVSW 484
Query: 517 RTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
+++ + HG L R+ +P H
Sbjct: 485 NAMISGLSQNGHGREALELFEEMRLEGTKPDH 516
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 171/352 (48%), Gaps = 16/352 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L+ C+ +++G++ H Y+L++G + T+L++MY+K A F+ L
Sbjct: 316 TLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFL 375
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
EP++ + ++I+G+ N + L + M+ +LP++ T ++K C ++ A+ +
Sbjct: 376 -LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQG 434
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K GL ++ I SAL Y KC +EE + +F + RD+V WNAM++G +Q
Sbjct: 435 KQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQN 494
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG--VP 271
G +ALE+F M EG T VLSA MG K G M +D VP
Sbjct: 495 GHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWA----YFNMMFDEFCLVP 550
Query: 272 VMN---ALIDMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ ++D+ + + EA E E + + + W ++ N++ +++
Sbjct: 551 RVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKL 610
Query: 328 LSAGFQPD--LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ G + V S++ A LA ++ R++ + V G+ K C I+
Sbjct: 611 MELGSRESSAYVLLSSIYTAMGRLADVVRVRRM---MKVRGVRKETGCSWIE 659
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 204/598 (34%), Positives = 340/598 (56%), Gaps = 12/598 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+H F + ASL + T+ + +IH+ ++ +G+ + +T L+N S Q+ YA
Sbjct: 50 DHCFNSDSFYASL--IDNSTHKRHLDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYA 107
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F+ C P+VF +NA+I + N+ ++ + MR GV PD +TFP ++K C +
Sbjct: 108 RKLFDEF-CYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTE 166
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
++ IHG + K G DV++ + LV Y KC + A VF+ L R +V W ++
Sbjct: 167 LLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSI 226
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++GYAQ G+ +AL +F +M G+ + +L A + + GR +HG V+KMG
Sbjct: 227 ISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGL 286
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ ++ +L Y K V A F+ M+ ++ WN++++ + + G+ + + LF
Sbjct: 287 EDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHY 346
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M+S +PD VT + + A + + +L + + Y+ + GS D+F+N +L+
Sbjct: 347 MISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYV---SKSNYGS-----DIFVNTSLI 398
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCGS+ A+ VF + S KDV W+ MI+GYG+ GQG EA++++ M +A + P++V
Sbjct: 399 DMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDV 458
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+G+L+AC+HSG + +G E M+ + +VP EHY+CV+D+LGRAG L EA +
Sbjct: 459 TFIGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMK 517
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
+P E VW LL+A +++ L E AA ++F L+P + G+YV +SN+Y + ++ V
Sbjct: 518 IPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCV 577
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR++ + K+ G S IE+ L F D+SHP AK I+ EL L RL+E G
Sbjct: 578 AHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVG 635
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 367 bits (943), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 328/588 (55%), Gaps = 13/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L CA L++G+ IHS + T G+ + SL+ MY+KC ++ A +F +S
Sbjct: 128 LGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRR 187
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++NAMI+ + + + + + M V P TF ++ C ++ + + +KIH
Sbjct: 188 SVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIH 244
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L+ G +LD+ + +AL+ Y +C+ +++A K+F+ LP RDVV W+AM+ +A+ F
Sbjct: 245 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 304
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+E + +M EG+ + +T VL A +G + GR VH ++ GY + AL+
Sbjct: 305 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 364
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL- 336
D+Y + EA +F+ +E +D W ++ + + G+ G L L+ M + P
Sbjct: 365 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 424
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+ +S V+ AC+ L A RQ H I +G+ I D + +L++MY++ G++
Sbjct: 425 IIYSCVISACASLGAFADARQAHSDIEADGM--------ISDFVLATSLVNMYSRWGNLE 476
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF KMS +D +W +I GY G+ AL ++ M +P E+TF+ VL ACS
Sbjct: 477 SARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACS 536
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G QG++ ++S Y + P I HY+C+ID+L RAG+L++A EL AMP E N V W
Sbjct: 537 HAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTW 596
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+LL ASR+H + A AA ++ +L+P +YVL+SN++ G + +R+TM +
Sbjct: 597 SSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVAR 656
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K G SWIE+ D +H F D SHP + I+AEL L+ +++E G
Sbjct: 657 GVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAG 704
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 22/390 (5%)
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
++ C D+ +V ++IH + +V++G+ +V Y KC + A F+ + ++
Sbjct: 34 LRQCQDLESV---RQIHDRISGAA-SANVFLGNEIVRAYGKCGSVASARVAFDAIARKND 89
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG- 259
W +M+ YAQ G + AL++++RM + + T VL A + + G+ +H
Sbjct: 90 YSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSR 146
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHD 318
I G V + N+L+ MY K + +A +FE M + + SWN+++ + Q G+ +
Sbjct: 147 ISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFE 206
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+RL++ M +P + TF++VL ACS+L L GR+IH I G D
Sbjct: 207 EAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTEL--------D 255
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + NAL+ MY +C + DA +F ++ ++DV SW+ MI + EA++ +S M
Sbjct: 256 LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 315
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
++P+ TF VL AC+ G L GR + G T+ + T ++D+ G L+
Sbjct: 316 EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLD 374
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGN 528
EA L + N + +W L+ G+
Sbjct: 375 EARSLFDQIENR-DEGLWTVLIGGYSKQGH 403
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +L+ G+ +H +L G + ++ T+L+++Y+ + A +F+ +
Sbjct: 324 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLE 152
+ +I G+ L+ + M+ +P K + C+I C + A +
Sbjct: 384 ENRDEGL-WTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 442
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++ H + G+ D + ++LVN Y + +E A +VF+++ RD + W ++ GYA+
Sbjct: 443 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 502
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY--DSGV 270
GE AL +++ M EG S T VL A G + G+ + I ++ Y +
Sbjct: 503 HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNI 561
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ +ID+ + + +A E+ M E + +W+S++
Sbjct: 562 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L C L ++ RQIH I +G A +VF+ N ++ Y KCGS+ A
Sbjct: 30 YRDALRQCQDLESV---RQIHDRI--SGAASA-------NVFLGNEIVRAYGKCGSVASA 77
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
++ F +++K+ SW M+ Y +G + ALD++ M L+P+ V + VL AC+
Sbjct: 78 RVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASI 134
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L +G+ + G+ + ++ M + G L +A L M + W
Sbjct: 135 EALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNA 194
Query: 519 LLAA 522
++AA
Sbjct: 195 MIAA 198
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 325/570 (57%), Gaps = 11/570 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L + I+ L + A + + + IH Y ++ G+ + +L++ Y KC +K VFN
Sbjct: 261 LVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFN 320
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E N ++N++I+G + L+ F M G P+ T ++ ++
Sbjct: 321 E-TVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFK 379
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K+IHG ++G + D++I ++L++ Y K EA +F L R++V WNAM+ YA
Sbjct: 380 AGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYA 439
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+A+ +M + G + T T VL A +GF G+ +H + V++G S +
Sbjct: 440 LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLF 499
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N+LIDMY K C+ A +F KD S+N ++ + + + +L LF M G
Sbjct: 500 VSNSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLG 558
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD+V+F V+ AC++LAAL G+++HG + N L + +F++N+L+D YTK
Sbjct: 559 KKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSH--------LFVSNSLLDFYTK 610
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + A +F ++ KDVASWN MILGYGM G+ + A+ MF M + ++ D V+++ V
Sbjct: 611 CGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAV 670
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSH G + +G ++ M ++ + PT HYTC++D+LGRAG + EA +L +P
Sbjct: 671 LSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAP 729
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W LL A R++GN +L AA+ +F+L+P HCG Y+L+SNIY G+++E IR
Sbjct: 730 DANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRE 789
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
M+ + +KNPGCSW+++ D +H F++ +R
Sbjct: 790 LMKSRGAKKNPGCSWVQIYDQVHAFVAEER 819
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 240/472 (50%), Gaps = 19/472 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNL- 93
I L LC+ +L + +++H+ + G + +S+ SLI Y+K +FN
Sbjct: 58 INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTF 117
Query: 94 -SCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+C F +N +I + + F G + +N M + GV D +TFP ++K C D +
Sbjct: 118 QNCR-TAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDIC 176
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ ++HG+VFKLG D DVY+G+ L+ Y C F+ +A ++F+E+P RDVV WN ++ +
Sbjct: 177 KGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLS 236
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN---GRVVHGIVVKMGYDS 268
G++ +A + M + + + V+S L + ++ R +H VK+G DS
Sbjct: 237 VNGDYTEARNYYFWMILRSV--IKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 294
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V NAL+D YGK V ++F EK+ SWNSI+ G L F M+
Sbjct: 295 QVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMI 354
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
AG QP+ VT S++LP L G++IHG+ + G D+F+ N+L+DM
Sbjct: 355 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTET--------DIFIANSLIDM 406
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y K G +A +F + ++++ SWN MI Y ++ EA+ M E P+ VTF
Sbjct: 407 YAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTF 466
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
VL AC+ GFL G+E + M R G+ + +IDM + G L+ A
Sbjct: 467 TNVLPACARLGFLGPGKE-IHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 517
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 12/190 (6%)
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L CS + +L+ +Q+H ++NG V + +L+ Y K +
Sbjct: 60 LLTLCSKVQSLLQTKQVHALGILNGFLPR-------SVSLCASLILNYAKFQHPGSFCSL 112
Query: 402 FTKMSK--KDVASWNIMILGYGMDGQGK-EALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F + + + WN +I + + G + + ++ M ++ D+ TF VL CS S
Sbjct: 113 FNQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDS 172
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ +G E ++ + G + ++ + G G LN+A L MP E + V W T
Sbjct: 173 FDICKGMEVHGVV-FKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMP-ERDVVSWNT 230
Query: 519 LLAASRLHGN 528
++ ++G+
Sbjct: 231 IIGLLSVNGD 240
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 322/590 (54%), Gaps = 16/590 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
CIA L +++ G+ +H + + G +L+ Y+K + K A+ VF+ +
Sbjct: 205 CIAGL------GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMP 258
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
+V ++N+MISG SN K ++ F M G D T ++ C ++ + +
Sbjct: 259 -HRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGR 317
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+HG K G + + L++ Y C K+F + ++VV W AM+ Y + G
Sbjct: 318 VVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAG 377
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ K +F+ M EG F +T L A K+G+ VHG ++ G + + V N
Sbjct: 378 LYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTN 437
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
AL++MY K + EA IF+ + KD+ SWN+++ + + + LF ML +P
Sbjct: 438 ALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRP 496
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VT + +LPA + L++L GR++H Y + G ++D F+ NAL+DMY KCG+
Sbjct: 497 NAVTMTCILPAAASLSSLERGREMHAYALRRGY--------LEDDFVANALIDMYVKCGA 548
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F ++S K++ SW IM+ GYGM G+G++A+ +F M + + PD +F +L A
Sbjct: 549 LLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYA 608
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSHSG +G F M + + P ++HYTC++D+L G L EAYE +MP E +
Sbjct: 609 CSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSS 668
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W +LL R+H N LAE A+RVF+LEP + G YVL++NIY ++E V +++ +
Sbjct: 669 IWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIG 728
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +R+N GCSWIE K +H FI+ +R+HP+ I L+ + R++E G
Sbjct: 729 GRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEG 778
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/496 (32%), Positives = 260/496 (52%), Gaps = 18/496 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIH-----SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
A LQLC+ +L+ G+ H S + R G+ D+ L L+ MY KC ++ A VF+
Sbjct: 96 AVLQLCSEVRSLEGGKRAHFLVRASSLGRDGM-DNVLG-QKLVLMYLKCGDLENARRVFD 153
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V + A++SG+ +G+ F M GV PD YT C++KC + ++
Sbjct: 154 EMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIE 213
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ + +HGL+ KLG +G+AL+ Y K ++A+ VF+ +P RDV+ WN+M++G
Sbjct: 214 DGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCT 273
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G + KA+E+F RM EG + T+ VL A + GRVVHG VK G+ S
Sbjct: 274 SNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTS 333
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ N L+DMY +IF M +K++ SW +++T + + G +D LF M G
Sbjct: 334 LANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEG 393
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD+ ++ L A + L HG+ +HGY + NG+ K + + NALM+MY K
Sbjct: 394 TRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKV--------LAVTNALMEMYVK 445
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG+M +A+++F + KD+ SWN +I GY + EA +F+ M +L+P+ VT +
Sbjct: 446 CGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCI 504
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L A + L +GRE + R G + +IDM + G L A L + N+
Sbjct: 505 LPAAASLSSLERGRE-MHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNK- 562
Query: 512 NPVVWRTLLAASRLHG 527
N + W ++A +HG
Sbjct: 563 NLISWTIMVAGYGMHG 578
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 2/316 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ L CA L G+ +H Y ++TG I L++MYS C + +F N
Sbjct: 298 ATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRN 357
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV ++ AMI+ + K F M G PD + + +
Sbjct: 358 M-VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKH 416
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +HG + G++ + + +AL+ Y+KC MEEA +F+ + +D++ WN ++ GY++
Sbjct: 417 GKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSR 476
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
++A +F M + + + T+T +L A + + GR +H ++ GY V
Sbjct: 477 NNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFV 535
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALIDMY K + A +F+ + K++ SW ++ + G + LF++M +G
Sbjct: 536 ANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGI 595
Query: 333 QPDLVTFSTVLPACSH 348
PD +FS +L ACSH
Sbjct: 596 APDAASFSAILYACSH 611
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
++ SR N + F+ T Q + T+ TCI L A ++L++G+E+H+Y LR
Sbjct: 470 LIGGYSRNNLANEAFSLFTEMLLQLRPNAVTM-TCI--LPAAASLSSLERGREMHAYALR 526
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G ++ +LI+MY KC + A +F+ LS N+ ++ M++G+ + +
Sbjct: 527 RGYLEDDFVANALIDMYVKCGALLLARRLFDRLS-NKNLISWTIMVAGYGMHGRGRDAIA 585
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-------VKKIHGLVFKLGLDLDVYIGS 173
F MR G+ PD +F ++ C E ++K H K+ L Y +
Sbjct: 586 LFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEH----KIEPRLKHY--T 639
Query: 174 ALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
+V+ + ++EA + + +P+ D +W +++ G
Sbjct: 640 CMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRG 676
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 326/595 (54%), Gaps = 18/595 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLS 94
+ ++ +C+ +L++GQ +H+ +L T +++ + + T+LI MY++C ++ A F+ +
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM---RQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + T+NA+I+G+ N L + M G+ PD TF + C V +
Sbjct: 122 -KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ ++I G D + +AL+N Y KC +E A KVF+ L RDV+ WN M++GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G +ALE+F+RM + T G+L+A + + GR +H V + GY+S +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 272 VMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ N L++MY K + EA ++FE M +D+ +WN ++ + Q G L +F +M
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ +T S VL AC+ L A G+ +H I +G CK DV + N+LM+MY
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIA------SGRCKA--DVVLENSLMNMYN 412
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CGS+ D VF + K + SW+ +I Y G + L+ F + + L D+VT V
Sbjct: 413 RCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVS 472
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
LSACSH G L +G + M +G+ P H+ C++D+L RAG+L A L MP
Sbjct: 473 TLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDI 569
+ V W +LL+ +LH +T A A ++F+LE L+SN+Y G+++ D+
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DV 589
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R T ++ RKNPGCS+IE+ D +H F++ D+SHPE + I AE+ L+ ++++ G
Sbjct: 590 RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 249/460 (54%), Gaps = 18/460 (3%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MY KC + AL VF+ + PN ++ +++ F N + L ++ M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIE-HPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
F I C + + + +H ++ + L+ D+ +G+AL+ Y +C+ +E A K F+E
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM---SKEGIWMSRFTVTGVLSALIMMGFF 251
+ + +V WNA++ GY++ G+ AL++++ M S EG+ T + L A ++G
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR + V GY S V NALI+MY K + A ++F+ ++ +D+ +WN++++ +
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G L LF RM +P++VTF +L AC++L L GR IH + +G
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYES-- 297
Query: 372 SCKDIDDVFMNNALMDMYTKC-GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+ + N L++MYTKC S+ +A+ VF +M +DV +WNI+I+ Y GQ K+AL
Sbjct: 298 ------DLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES-RYGVVPTIEHYTCVID 489
D+F M + P+E+T VLSAC+ G QG+ L+ S R +E+ +++
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN--SLMN 409
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M R G L++ + A+ +++ V W TL+AA HG++
Sbjct: 410 MYNRCGSLDDTVGVFAAIRDKS-LVSWSTLIAAYAQHGHS 448
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK V +AL +F +E + SW I+ + G++ L + RM+ G +PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F + CS L G+ +H I+ L + D+ + AL+ MY +C + A
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEF-------DIILGTALITMYARCRDLELA 113
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSAC 455
+ F +M KK + +WN +I GY +G + AL ++ M +KPD +TF L AC
Sbjct: 114 RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173
Query: 456 SHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ G +SQGRE + S Y +++ +I+M + G L A ++ + N + +
Sbjct: 174 TVVGDISQGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVI 230
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
W T+++ G A QR+ +P
Sbjct: 231 AWNTMISGYAKQGAATQALELFQRMGPNDP 260
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 15/298 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKC-CQMKYALFV 89
+ T I L C + +L++G+ IH + G +S L I + L+NMY+KC ++ A V
Sbjct: 264 VVTFIGLLTACTNLEDLEQGRAIHRKVREDGY-ESDLVIGNVLLNMYTKCSSSLEEARQV 322
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + +V T+N +I + A LD F M+ V P++ T ++ C + A
Sbjct: 323 FERMRTR-DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGA 381
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K +H L+ DV + ++L+N Y +C +++ + VF + + +V W+ ++
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ G LE F + +EG+ T+ LSA G K G V + +G
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG--VQTFLSMVGDHGL 499
Query: 270 VPVMN---ALIDMYGKGKCVGEALE--IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
P ++D+ + + EA E I +M D +W S+++ C H+ T R
Sbjct: 500 APDYRHFLCMVDLLSRAGRL-EAAENLIHDMPFLPDAVAWTSLLS---GCKLHNDTKR 553
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 323/575 (56%), Gaps = 12/575 (2%)
Query: 53 EIHSYMLRTGIIDSPLSITS--LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
++H++ ++ G +P S L+ Y + ++ A +F + E + T+N +I+G+
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP-EKDSVTFNTLITGYE 226
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + + F MRQ G P +TF ++K + +++H L G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +++ Y K + E +F+E+P D V +N +++ Y+Q ++ +L FR M G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
F +LS + + GR +H + DS + V N+L+DMY K + EA
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
IF+ + ++ SW ++++ + Q G H L+LF +M + + D TF+TVL A + A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L+ G+Q+H +I+ +G ++++VF + L+DMY KCGS++DA VF +M ++
Sbjct: 467 SLLLGKQLHAFIIRSG--------NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I + +G G+ A+ F+ M E+ L+PD V+ +GVL+ACSH GF+ QG E+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M YG+ P +HY C++D+LGR G+ EA +L MP E + ++W ++L A R+H N
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 531 LAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LAE AA+++F +E YV MSNIY A G++E+V D++ MR++ ++K P SW+E+
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F S+D++HP I +++ LTA + G
Sbjct: 699 NHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 234/469 (49%), Gaps = 15/469 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S ++I+ + K + A +F+ + + V T+ ++ + N + F M +
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 128 LG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY--IGSALVNTYLKCQ 183
LPD TF L+ C D + V ++H KLG D + + + + L+ +Y + +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
++ A +FEE+P +D V +N ++ GY + G + +++ +F +M + G S FT +GVL
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A++ + F G+ +H + V G+ V N ++D Y K V E +F+ M E D S
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+N +++ + Q ++ +L F M GF F+T+L ++L++L GRQ+H +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
LA S + + N+L+DMY KC +A+++F + ++ SW +I GY
Sbjct: 379 ---LATADSI-----LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G L +F+ M + L+ D+ TF VL A + L G++ + R G + +
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI-IRSGNLENVFS 489
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ ++DM + G + +A ++ MP+ N V W L++A +G+ + A
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAA 537
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 198/421 (47%), Gaps = 30/421 (7%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++H+ + TG +++ YSK ++ +F+ + E + +YN +IS +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYS 327
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
D L FF M+ +G + F ++ ++ ++ +++H D ++
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G++LV+ Y KC+ EEA +F+ LP R V W A+++GY Q G L++F +M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T VL A G+ +H +++ G V + L+DMY K + +A+
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++FE M +++ SWN++++ H G+ + + F +M+ +G QPD V+ VL ACSH
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 351 ALMHG---------------RQIHGYIVVNGLAKNGSCKDID----------DVFMNNAL 385
+ G ++ H +++ L +NG + + D M +++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 386 MDM----YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
++ + + R A+ +F+ +D A++ M Y G+ ++ D+ M E +
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 442 K 442
K
Sbjct: 688 K 688
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 191/456 (41%), Gaps = 67/456 (14%)
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
SN+ + L +RQ P TF L+ +++ + K G D D
Sbjct: 7 SNEVRSRTLATLRQLRQ----PSPATF-------------LDTRRVDARIIKTGFDTDTC 49
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +V L+ + A KV++E+P ++ V N M++G+ + G+ A ++F M
Sbjct: 50 RSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRT 109
Query: 231 I--------WMSR-------------------------FTVTGVLSALIMMGFFKNGRVV 257
+ W +R T T +L V
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV 169
Query: 258 HGIVVKMGYDSG--VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
H VK+G+D+ + V N L+ Y + + + A +FE + EKD ++N+++T +E+ G
Sbjct: 170 HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG 229
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ ++ LF +M +G QP TFS VL A L G+Q+H V G +++ S
Sbjct: 230 LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS--- 286
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ N ++D Y+K + + +M+F +M + D S+N++I Y Q + +L F
Sbjct: 287 -----VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY-TCVIDMLGRA 494
M F +LS ++ L GR+ ++ +I H ++DM +
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKC 399
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAA---SRLHG 527
EA + ++P V W L++ LHG
Sbjct: 400 EMFEEAELIFKSLPQRTT-VSWTALISGYVQKGLHG 434
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 44/239 (18%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T L+ A +L G+++H++++R+G +++ S + L++MY+KC +K A+ VF
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 93 LSCEPNVFTYNAMISGFYSN-----------------------------------DFAFK 117
+ + N ++NA+IS N F +
Sbjct: 513 MP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 118 GLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
G ++F M + G+ P K + C++ E +K L+ ++ + D + S+++
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK---LMDEMPFEPDEIMWSSVL 628
Query: 177 NT--YLKCQFMEE--ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
N K Q + E A K+F LRD + +M N YA GE+ K +V + M + GI
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 195/600 (32%), Positives = 339/600 (56%), Gaps = 38/600 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA +L+ G ++H++ L++ + + T+ ++MY+KC M+ A +F+ +S N
Sbjct: 289 LKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFD-MSENLN 347
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +YNAMI+G+ D F+ L F + + + D+ + ++ C V + E ++HG
Sbjct: 348 LQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHG 407
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K ++ + +A ++ Y KC+ ++EA +VF+E+ +D V WNA++ + Q E K
Sbjct: 408 LATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSK 467
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L + M + G+ +T VL A +G +H +VK+G S + ++L+D
Sbjct: 468 TLNILVSMLRSGMEPDEYTFGSVLKA-CAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVD 526
Query: 279 MYGKGKCVGEALEIF-----------------EMMEEKD----------IFSWNSIMTVH 311
MY K + EA +I E +EE I SWN+I++ +
Sbjct: 527 MYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGY 586
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ R F+RM+ G PD T+STVL C++LA++ G+QIH +++ L
Sbjct: 587 VMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY-- 644
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
DV++ + L+DMY+KCG++ D++++F K +D +WN MI GY G G+EA+
Sbjct: 645 ------DVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIK 698
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M + P+ TFV +L AC+H G + +G ++ +M+ YG+ P +EHY+ ++D+L
Sbjct: 699 LFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDIL 758
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH-GNTDLAEIAAQRVFQLEPGHCGNY 550
G++G++ +A EL MP EA+ V+WRTLL+A +++ N + AE+AA + +L+P Y
Sbjct: 759 GKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTY 818
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
+L+SNIY G +++ ++R MR ++K PGCSW+E++D HTF+ D++HP K IY
Sbjct: 819 ILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIY 878
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/572 (27%), Positives = 278/572 (48%), Gaps = 52/572 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C+ N + G +IH LR G +S ++L++MY+KC ++ + VF + + N
Sbjct: 188 LKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMP-QKN 246
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++A+I+G N+F GL F M+++GV + + ++K C + + ++H
Sbjct: 247 WISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHA 306
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D + +A ++ Y KC M++A ++F+ ++ +NAM+ GY+Q +
Sbjct: 307 HALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFR 366
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR++SK + +++G L A + G +HG+ K + + V NA ID
Sbjct: 367 ALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFID 426
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK + + EA +F+ M KD SWN+I+ HEQ TL + ML +G +PD T
Sbjct: 427 MYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYT 486
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL AC+ +L HG +IH IV G+A N ++ ++L+DMY+KCG + +A
Sbjct: 487 FGSVLKACAG-DSLNHGMEIHTTIVKLGMASNP--------YIGSSLVDMYSKCGMIDEA 537
Query: 399 QMVFTKM---------------------------SKKDVASWNIMILGYGMDGQGKEALD 431
+ + K+ ++ + SWN +I GY M Q ++A
Sbjct: 538 EKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQR 597
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF---LPLMESRYGVVPTIEHYTC-- 486
F+ M E + PD+ T+ VL C++ + G++ + E +Y V Y C
Sbjct: 598 FFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDV------YICST 651
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA--EIAAQRVFQLEP 544
++DM + G L+++ + P + V W ++ HG + A + + + P
Sbjct: 652 LVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMP 710
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
H +V + G E LD H M+++
Sbjct: 711 NH-ATFVSLLRACAHMGLVERGLDYFHMMKKE 741
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 248/528 (46%), Gaps = 47/528 (8%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQL----CAHQTNLQKGQEIHSYMLRTGIID 65
P+ FS S+ + P AT +A+ CA Q + G++ H++M+ +G
Sbjct: 26 PYRRVRIFSISTASVNHEKP---ATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRP 82
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEP---------------------------- 97
+ L+ +Y C + YA +F+ +
Sbjct: 83 TVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMP 142
Query: 98 --NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V ++N+M+SGF + + F M + GV D +F ++K C + +
Sbjct: 143 TRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQ 202
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG+ ++G D DV GSAL++ Y KC+ ++E+ VF +P ++ + W+A++ G Q
Sbjct: 203 IHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNF 262
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
L++F+ M K G+ +S+ VL + + + G +H +K + V A
Sbjct: 263 LDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTA 322
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+DMY K + +A +F+M E ++ S+N+++T + Q N L LF ++ + D
Sbjct: 323 TLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFD 382
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
++ S L AC+ + L G Q+HG + ++N + + NA +DMY KC ++
Sbjct: 383 EISLSGALRACATVKGLSEGLQLHGLATKSNFSRN--------ICVANAFIDMYGKCEAL 434
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A VF +M +KD SWN +I + + + + L++ M + ++PDE TF VL AC
Sbjct: 435 DEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKAC 494
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ L+ G E + + G+ + ++DM + G ++EA ++
Sbjct: 495 AGDS-LNHGMEIHTTI-VKLGMASNPYIGSSLVDMYSKCGMIDEAEKI 540
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 199/418 (47%), Gaps = 41/418 (9%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
F + K C A K+ H + G V++ + L+ Y+ C + A K+F+ +
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 196 PLRDVVLWNAMVNGYA-------------------------------QIGEFHKALEVFR 224
PLRDVV WNAM+ GYA Q GE ++++VF
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M + G+ + + +L ++ +K G +HGI ++MGYD+ V +AL+DMY K K
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCK 230
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ E+ +F M +K+ SW++I+ Q DG L++F M G +++VL
Sbjct: 231 RLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLK 290
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+C+ L L G Q+H + + + K+G + A +DMY KC +M+DAQ +F
Sbjct: 291 SCATLPDLRLGTQLHAHALKSDFVKDG--------IVRTATLDMYAKCNNMQDAQRLFDM 342
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
++ S+N MI GY G AL +F + ++ L DE++ G L AC+ LS+G
Sbjct: 343 SENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEG 402
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ L + ++ I IDM G+ L+EA + M + + V W ++AA
Sbjct: 403 LQ-LHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRK-DAVSWNAIIAA 458
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 339/598 (56%), Gaps = 17/598 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +CA + +++KG +H ++ G+ + + SLI+MYSKC + A +F+
Sbjct: 204 VATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD 263
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIKCCCDVMA 149
+ + N+ ++N+MI G+ + + M+ + D++T ++ C +
Sbjct: 264 K-NDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE 322
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +K++HG ++ GL + + +A + Y +C + + +VF+ + + V WNA++ G
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCG 382
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ + KAL+++ +M+ G+ FT+ +L A M G +HG ++ G
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 270 VPVMNALIDMYGKGKCVGE---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ +L+ +Y C G+ A +F+ ME + + SWN ++ + Q G D + LF +
Sbjct: 443 PFIGISLLSLY---ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQ 499
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
MLS G QP + V ACS L+AL G+++H + + L +D+F++++++
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLT--------EDIFVSSSII 551
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY K G + +Q +F ++ +KDVASWN++I GYG+ G+GKEAL++F M LKPD+
Sbjct: 552 DMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDF 611
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF G+L ACSH+G + G E+ M + + + P +EHYTCV+DMLGRAG++++A L
Sbjct: 612 TFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEE 671
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP + + +W +LL++ R+HGN L E A ++ +LEP NYVL+SN++ GK+++V
Sbjct: 672 MPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDV 731
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+ ++K+ GCSWIE+ +H F+ D PE + + L ++ G
Sbjct: 732 RRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIG 789
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/435 (31%), Positives = 229/435 (52%), Gaps = 15/435 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C + +++ G+ +H + T + + T +I MYS C + VF+ L
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-RK 63
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA++S + N+ + F+ + + PD +T PC+IK C ++ + + I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+ K+ L DV++G+AL+ Y KC +EEA+KVFE +P R++V WN+++ G+++ G
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 217 HKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
++ FR M +E T+ VL + G VHG+ VK+G + + V N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS--AGF 332
+LIDMY K + + EA +F+ ++K+I SWNS++ + + + T L +M + A
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKM 303
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ D T VLP C + L +++HGY +GL N + NA + YT+C
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE--------LVANAFIAAYTRC 355
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ ++ VF M K V+SWN ++ GY + ++ALD++ M ++ L PD T +L
Sbjct: 356 GALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLL 415
Query: 453 SACSHSGFLSQGREF 467
ACS L G E
Sbjct: 416 LACSRMKSLHYGEEI 430
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/632 (32%), Positives = 326/632 (51%), Gaps = 68/632 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL + H+ +L++ + + +L++ Y++ +++ A VF+ + N F+YNA++
Sbjct: 32 NLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLR-NTFSYNALL 90
Query: 107 SGF---------------------------------YSNDFAFKGLDFFNHMRQLGVLPD 133
S + + A L F M + +
Sbjct: 91 SAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLN 150
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
Y+F + C +++HGLV + DV+I SALV+ Y KC+ E+A +VF+
Sbjct: 151 AYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFD 210
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P R+VV WN+++ Y Q G +AL +F M G T++ V+SA + +
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE 270
Query: 254 GRVVHGIVVKMGYDSGVPVM-NALIDMYGK------GKC--------------------- 285
GR VH +VK V+ NAL+DMY K +C
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYA 330
Query: 286 ----VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
V +A +F M EK++ +WN ++ + Q G + +RLF ++ P T+
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC ++A L G+Q H +++ G + + DVF+ N+L+DMY K GS+ D V
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPE--SDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M+ +D SWN MI+GY +G+ K+AL +F M + PD VT +GVLSAC HSG +
Sbjct: 449 FERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLV 508
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+GR + M +G+ P+ +HYTC++D+LGRAG L EA EL MP E + V+W +LL
Sbjct: 509 DEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLG 568
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A RLH N +L E A R+F+L+P + G YVL+SN+Y GK+ EV +R +M+ + V K
Sbjct: 569 ACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQ 628
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
PGCSWIE+ ++ F++ D+ HP I+ L
Sbjct: 629 PGCSWIEIGRKMNVFLARDKRHPCRNEIHNTL 660
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 201/417 (48%), Gaps = 49/417 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA + + + G+++H + R+ D ++L++MY+KC + + A VF+ + E
Sbjct: 156 SALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMP-E 214
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++N++I+ + N + L F M G PD+ T ++ C + A E +++
Sbjct: 215 RNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQV 274
Query: 157 HGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR----------------- 198
H + K L D+ + +ALV+ Y KC EA +F+ +P R
Sbjct: 275 HAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSAN 334
Query: 199 --------------DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+V+ WN ++ YAQ GE +A+ +F ++ ++ IW + +T VL+A
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 245 LIMMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ + G+ H V+K G+ +S V V N+L+DMY K + + ++FE M
Sbjct: 395 CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ- 357
+D SWN+++ + Q G L LF+RML + PD VT VL AC H + GR+
Sbjct: 455 RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRY 514
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASW 413
H +G+ + D + ++D+ + G +++A+ + M + D W
Sbjct: 515 FHSMTEDHGITPS------RDHY--TCMVDLLGRAGHLKEAEELINDMPMEPDSVLW 563
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 205/600 (34%), Positives = 314/600 (52%), Gaps = 46/600 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+L +A+ + AH +L+ +L + + LI Y+ C + A V
Sbjct: 14 SLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVL 73
Query: 91 NNLSCEPNVFT----YNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCC 144
+ S + T +N +I ++ L F MR G PD YT+P +K C
Sbjct: 74 ESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSC 133
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+L +IH V KL LD +VY+ + ++ Y +C E+A +VF+ +P RDVV WN
Sbjct: 134 SASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWN 193
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM+ G+A++G F +A+EVF++ +++ G + + GI+ M
Sbjct: 194 AMIAGFARVGLFDRAIEVFKQF------------------VVLQGSMPDAGTMAGILPAM 235
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G NA K + +F+ M+ K++ SWN+++ V+ H + LF
Sbjct: 236 G--------NA------KPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELF 281
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +PD +T +TVLP C L+A G++IH I + N + + NA
Sbjct: 282 MLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPN--------LLLENA 333
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
LMDMY CG ++DA+ +F MS +DV SW +I YG G G+EA+D+F M L+PD
Sbjct: 334 LMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPD 393
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ FV VL+ACSH+G L+ G+ + M SRY ++P EHYTC++D+LGRAG +NEAY+
Sbjct: 394 SIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFI 453
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
M E N VW LL A R+H N D+ +AA +F L P G YVL+SN+Y G++
Sbjct: 454 TTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWA 513
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V +R M + ++K PG S +EL D +HTF DR HP+++ IY +L L ++R G
Sbjct: 514 DVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMG 573
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 209/691 (30%), Positives = 344/691 (49%), Gaps = 115/691 (16%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L +C +L+ G+++H +L+ G + + +LI+MY KC + A V ++
Sbjct: 141 LNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDC 200
Query: 95 ------------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
EPNV T++A+I GF SN + + ++ F
Sbjct: 201 VSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFAR 260
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M GV PD T ++ C + + K++HG + + L + ++ +ALV Y +C
Sbjct: 261 MVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGD 320
Query: 185 MEEALKVFEELPL-----------------------------------RDVVLWNAMVNG 209
M+ A K+F + RD + WN M++G
Sbjct: 321 MKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISG 380
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ F AL +FR + EGI FT+ +L+ M + G+ +H I + G S
Sbjct: 381 HVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSN 440
Query: 270 VPVMNALIDMY-----------------------------GKGKC--VGEALEIFEMME- 297
V AL++MY G +C +G+ E+ E M+
Sbjct: 441 SFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKS 500
Query: 298 ---EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
E ++++WNSI+ + +D ++LF+ M + +PD+ T +L ACS LA +
Sbjct: 501 DGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHR 560
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G+Q+H Y + G D + L+DMY KCGS++ V+ K+S ++ N
Sbjct: 561 GKQVHAYSIRAGYDS--------DAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHN 612
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
M+ Y M G G+E + +F M +++++PD VTF+ VLS+C H+G + G E LME+
Sbjct: 613 AMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET- 671
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
Y + PT++HYTC++D+L RAG+L+EAY+L MP EA+ V W LL +H L EI
Sbjct: 672 YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEI 731
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
AA+++ +LEP + GNYVL++N+Y + G++ ++ R M + ++K+PGCSWIE +DG+H
Sbjct: 732 AAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVH 791
Query: 595 TFISSDRSHPEAKSIYAELHSLTA--RLREH 623
F++SD+SH + IY L +LT R++EH
Sbjct: 792 IFLASDKSHQRVEEIYFMLDNLTKFIRIKEH 822
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 163/641 (25%), Positives = 277/641 (43%), Gaps = 123/641 (19%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T T LQ +L G+++HS+ ++TG + T L+ MYS + A
Sbjct: 31 PLTSTTYSTILQ---SSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWH 87
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLGVLPDKYTFPCLIKCCCD 146
+F+ ++ + N+ ++ A++ + +KG F LG D + FP ++ CC
Sbjct: 88 MFDKMTLK-NLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCG 146
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ + +++HG+V K G +VY+G+AL++ Y KC ++EA KV E + +D V WN++
Sbjct: 147 LGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSI 206
Query: 207 V-----NGY------------------------AQIGEFH------KALEVFRRMSKEGI 231
+ NG A IG F +++E+F RM G+
Sbjct: 207 ITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGV 266
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--------- 282
T+ VL A M + G+ +HG +V+ S V NAL+ MY +
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFK 326
Query: 283 ------GKC----------------VGEALEIFEMME----EKDIFSWNSIMTVHEQCGN 316
KC VG+A E+F ME E+D SWN +++ H
Sbjct: 327 IFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFM 386
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
D L LF +L G +PD T ++L + + + G++IH +V GL N
Sbjct: 387 FDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNS----- 441
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG--------------M 422
F+ AL++MY KC + AQM F ++S++D ++WN +I GY M
Sbjct: 442 ---FVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERM 498
Query: 423 DGQGKE---------------------ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
G E A+ +F+ M + L+PD T +L+ACS +
Sbjct: 499 KSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATI 558
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G++ + R G ++DM + G + Y++ + N N V +L
Sbjct: 559 HRGKQ-VHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISN-PNLVCHNAMLT 616
Query: 522 ASRLHGNTDLAEIAAQRVF--QLEPGHCGNYVLMSNIYVAG 560
A +HG+ + + +R+ ++ P H ++S+ AG
Sbjct: 617 AYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAG 657
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 193/461 (41%), Gaps = 88/461 (19%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L G+E+H Y++R + + +L+ MY +C MK A +F+
Sbjct: 272 TLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKF 331
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV----------------------- 130
+ +YN MI G+ N K + F M Q GV
Sbjct: 332 A-RKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDA 390
Query: 131 ------------LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
PD +T ++ D+ + + K+IH + GL + ++G ALV
Sbjct: 391 LMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEM 450
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI------W 232
Y KC + A F+E+ RD WNA+++GYA+ + K E+ RM +G W
Sbjct: 451 YCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTW 510
Query: 233 MS-----------------------------RFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
S +TV +L+A + G+ VH ++
Sbjct: 511 NSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIR 570
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
GYDS + L+DMY K + +++ + ++ N+++T + G+ + + +
Sbjct: 571 AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVI 630
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ----IHGYIVVNGLAKNGSCKDIDDV 379
F RML + +PD VTF +VL +C H ++ G + + Y + L K+ +C
Sbjct: 631 FRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTL-KHYTC------ 683
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
++D+ ++ G + +A + M + D +W+ ++ G
Sbjct: 684 -----MVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGG 719
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 153/339 (45%), Gaps = 20/339 (5%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H +K G+ + V L+ MY +A +F+ M K++ SW +++ +H
Sbjct: 50 GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLN 109
Query: 314 CGNHDGTLRLFDRMLSAGF--QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G LF+ L G + D F VL C L L GRQ+HG ++ +G N
Sbjct: 110 MGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTN- 168
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
V++ NAL+DMY KCGS+ +A+ V M++KD SWN +I +G EALD
Sbjct: 169 -------VYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALD 221
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+ M ++L+P+ VT+ V+ S + + + E M GV P V+
Sbjct: 222 LLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA-GVAPDARTLASVLPAC 280
Query: 492 GRAGQLNEAYEL-ALAMPNE--ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC- 547
R L EL + +E +N V L+ R G+ +A ++F C
Sbjct: 281 SRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMK----SAFKIFSKFARKCA 336
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
+Y M Y+ G + ++ + M Q+ V ++ SW
Sbjct: 337 ASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDR-ISW 374
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 192/558 (34%), Positives = 321/558 (57%), Gaps = 11/558 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ N +G+++H +++ G DS T L++MY+KC +++ + VF+ + + N
Sbjct: 110 LKACSESRNFDEGRKVHCQIVKFGNPDS-FVFTGLVDMYAKCGEIECSRSVFDE-NLDRN 167
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF++++MI+G+ N+ A GL FN MR+ + ++ T L+ C + A+ + K +HG
Sbjct: 168 VFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHG 227
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K G++L Y+ +AL++ Y KC + +A VF+EL D+V W AM+ GY Q G +
Sbjct: 228 YLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEE 287
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++F + + + + T+ V S+ + GR +HG+ +K+G + V N+L+D
Sbjct: 288 ALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVD 346
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + +A +FE + ++D+ +WNSI++ Q G+ L LF +M PD VT
Sbjct: 347 FYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVT 406
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ L AL G H Y V GL + +V++ AL+ Y KCG A
Sbjct: 407 LVSVLSACASLNALQVGSSFHAYAVKRGLLSS-------NVYVGTALLTFYAKCGDAESA 459
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+++F M +K +W+ MI GYG+ G G+ +L +F M +A+LKP+E F +LSACSH+
Sbjct: 460 RVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHT 519
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G ++ Y +VP+ +HYTC++D+L RAG+L EA + MP + + ++
Sbjct: 520 GMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGA 579
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
L LH DL E+A +R+ +L PG YVLM N+Y + ++ +V +R M+Q+ +
Sbjct: 580 FLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGL 639
Query: 579 RKNPGCSWIELKDGLHTF 596
K PGCS +E+ D H F
Sbjct: 640 MKTPGCSLMEM-DVDHDF 656
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 237/482 (49%), Gaps = 12/482 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
N+ E+H+Y++ G+ T L+++Y ++ A VF+ + P+ ++ +I
Sbjct: 17 NINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIP-HPDFLSWKVII 75
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
++ N + F+N MR D F ++K C + E +K+H + K G +
Sbjct: 76 RWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-N 134
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D ++ + LV+ Y KC +E + VF+E R+V W++M+ GY Q L +F RM
Sbjct: 135 PDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRM 194
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+E I ++ T+ ++ A +G G+ +HG ++K G + G ++ AL+D+Y K V
Sbjct: 195 REELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVV 254
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A +F+ + DI SW +++ + Q G + L+LF + P+ VT ++V +C
Sbjct: 255 RDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSC 314
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S L L GR IHG + K GS D + N+L+D Y KC RDA+ VF +S
Sbjct: 315 SQLLNLNLGRSIHGLSI-----KLGS----RDPIVTNSLVDFYAKCQMNRDARYVFETIS 365
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+DV +WN +I + +G EAL++F M + PD VT V VLSAC+ L G
Sbjct: 366 DRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS 425
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
F R + + T ++ + G A + M ++ + V W +++ +
Sbjct: 426 FHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGM-DQKSTVTWSAMISGYGIQ 484
Query: 527 GN 528
GN
Sbjct: 485 GN 486
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 182/385 (47%), Gaps = 14/385 (3%)
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
CD + L ++H + GL D+ + LV+ Y ++ A VF+ +P D + W
Sbjct: 15 CDNINTL--MEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ Y EF + + RM + VL A F GR VH +VK
Sbjct: 73 VIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKF 132
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G V L+DMY K + + +F+ ++++FSW+S++ + Q L LF
Sbjct: 133 GNPDSF-VFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLF 191
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+RM + + +T ++ AC L AL G+ +HGY++ G+ + GS ++ A
Sbjct: 192 NRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGI-ELGS-------YLVTA 243
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+D+Y KCG +RDA+ VF ++ D+ SW MI+GY +G +EAL +F + + P+
Sbjct: 244 LLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPN 303
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+VT V S+CS L+ GR L P + + ++D + Q+N
Sbjct: 304 DVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTN--SLVDFYAKC-QMNRDARYV 360
Query: 505 LAMPNEANPVVWRTLLAASRLHGNT 529
++ + V W ++++A +G+
Sbjct: 361 FETISDRDVVAWNSIISAFSQNGSA 385
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T ++ L CA LQ G H+Y ++ G++ S + + T+L+ Y+KC + A +F+
Sbjct: 406 TLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDG 465
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + V T++AMISG+ L F M + + P++ F ++ C + E
Sbjct: 466 MDQKSTV-TWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGE 524
Query: 153 VKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
++ ++ + L Y + +V+ + ++EAL +++P++ DV L+ A ++
Sbjct: 525 GWRLFTMICQDYNLVPSTKHY--TCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLH 582
Query: 209 GYAQIGEFHKALEVFRRM 226
G F +RM
Sbjct: 583 GCGLHSRFDLGELAIKRM 600
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 206/648 (31%), Positives = 344/648 (53%), Gaps = 72/648 (11%)
Query: 40 QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV 99
+LC N + +++H ++++ +LIN YSK + YA VF+ + +PN
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMP-QPNS 71
Query: 100 FTYNAM-------------------------------ISGFYSNDFAFKGLDFFNHMRQL 128
F++N M ISG+ + + +N M +
Sbjct: 72 FSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKD 131
Query: 129 GVLP-DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GVL ++ TF ++ V ++IHG + K G V++GS+LV+ Y K +
Sbjct: 132 GVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSV 191
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGE-------FH----------------------- 217
A +VF+E+ R+VV++N M+ G + G FH
Sbjct: 192 ASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLE 251
Query: 218 -KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A+++FR M +EG+ M ++T VL+A + K G+ +H ++++ GY+ V V +AL
Sbjct: 252 AEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSAL 311
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K + V A +F+ M K++ SW +++ + Q G + +R+F M G +PD
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDD 371
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +V+ +C++LA+L G Q H +V+GL I + ++NAL+ +Y KCGS+
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCQALVSGL--------ISFITVSNALITLYGKCGSIE 423
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D+ +F +MS +D SW ++ GY G+ E +D+F M LKPD VTF+ VLSACS
Sbjct: 424 DSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACS 483
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+G + +G+++ M +G++P +HYTC+ID+ GRAG+L EA MP + + W
Sbjct: 484 RAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGW 543
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL++ RL+GN ++ + AA+ + +L+P + Y+L+S+IY A GK+ V +R MR++
Sbjct: 544 ATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREK 603
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PG SWI+ K ++ F + D+S P + IYAEL L ++ E G
Sbjct: 604 GARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEG 651
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/568 (35%), Positives = 319/568 (56%), Gaps = 16/568 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++HS ++ G+ D+ S T+L++MY+KC + + A +F+ + E N ++NA+++G+
Sbjct: 120 GTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMP-ERNTVSWNALVAGYV 178
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + F M + G LPD+ TF L+ D L + ++HG + K G L +
Sbjct: 179 ESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFL-MHQLHGKIVKYGSALGLI 237
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEFHKALEVFRRMSK- 228
+ +A + Y +C + + ++F+E+ R D++ WNAM+ YA G H+A+ F M +
Sbjct: 238 VLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRA 297
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
G+ ++ T ++SA G V+HG+V K G++ V NALI MY + C+
Sbjct: 298 SGVQPDMYSFTSIISACAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCM 356
Query: 287 GE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
E A + F+ + KD SWNS++T + Q G LR F M S D FS L +
Sbjct: 357 MEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRS 416
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS LA L GRQIHG ++ +G A N F++++L+ MY+K G + DA F +
Sbjct: 417 CSDLALLRLGRQIHGLVIRSGFASNN--------FVSSSLIFMYSKSGILDDAMKSFEEA 468
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K WN M+ GY G+ + +F+ M E K+ D +TFVG+++ACSH+G + +G
Sbjct: 469 DKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGS 528
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L MESRYG+ +EHY C ID+ GRAGQL++A EL +MP E + +VW TLL A R+
Sbjct: 529 EILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRV 588
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A + + EP YVL+SN+Y G + + ++ M+ + + K PG S
Sbjct: 589 HGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWS 648
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAEL 613
WIE+K+ +H+F + D SHP IY L
Sbjct: 649 WIEVKNEVHSFNAEDGSHPRMDEIYEML 676
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 153/324 (47%), Gaps = 17/324 (5%)
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + V K H + K G+ L + + A ++F+E+P D WN+++
Sbjct: 14 LTIAAVAKSHATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLL 73
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ IG A + R M + G+ + F + L + MG G +H + VK G
Sbjct: 74 AAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLA 133
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V AL+ MY K +A +F+ M E++ SWN+++ + + G ++LF M
Sbjct: 134 DNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEM 193
Query: 328 LSAGFQPDLVTFSTVLPACSHLAA-LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
GF PD TF+ +L + LMH Q+HG IV G A + + NA +
Sbjct: 194 EREGFLPDEATFAALLTVVNDSTCFLMH--QLHGKIVKYGSALG--------LIVLNAAI 243
Query: 387 DMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPD 444
Y++CG++ +++ +F ++ + D+ SWN M+ Y G EA+ F+ M A ++PD
Sbjct: 244 TAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPD 303
Query: 445 EVTFVGVLSACS----HSGFLSQG 464
+F ++SAC+ H G + G
Sbjct: 304 MYSFTSIISACAEHRDHGGTVIHG 327
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ C+ L+ G++IH ++R+G + +SLI MYSK + A+ F
Sbjct: 412 AALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKS 471
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V +N+M+ G+ + A FN M +L V D TF LI C V E +I
Sbjct: 472 SSV-PWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI 530
Query: 157 -HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ + + G+ L + + ++ Y + +++A ++ + +P D ++W
Sbjct: 531 LNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVW 579
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/596 (33%), Positives = 334/596 (56%), Gaps = 18/596 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
+ L+T +++ C+ L+ G++IH+++LR G+ +D+ L + LI+ Y KC ++ A
Sbjct: 250 YILSTVLSA---CSILPFLEGGKQIHAHILRYGLEMDASL-MNVLIDSYVKCGRVIAAHK 305
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + N+ ++ ++SG+ N + ++ F M + G+ PD Y ++ C +
Sbjct: 306 LFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ ++H K L D Y+ ++L++ Y KC + +A KVF+ DVVL+NAM+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 209 GYAQIG---EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
GY+++G E H+AL +FR M I S T +L A + + +HG++ K G
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ + +ALID+Y C+ ++ +F+ M+ KD+ WNS+ + Q ++ L LF
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ + +PD TF+ ++ A +LA++ G++ H ++ GL N ++ NAL
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP--------YITNAL 596
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCGS DA F + +DV WN +I Y G+GK+AL M M ++P+
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TFVGVLSACSH+G + G + LM R+G+ P EHY C++ +LGRAG+LN+A EL
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP + +VWR+LL+ GN +LAE AA+ +P G++ ++SNIY + G + E
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTE 775
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+R M+ + V K PG SWI + +H F+S D+SH +A IY L L ++R
Sbjct: 776 AKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 245/495 (49%), Gaps = 27/495 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQL A L +H ++ G+ +D+ LS LIN+YS+ M YA VF + E
Sbjct: 51 LQLRASDDLLHYQNVVHGQIIVWGLELDTYLS-NILINLYSRAGGMVYARKVFEKMP-ER 108
Query: 98 NVFTYNAMIS-----GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC--DVMAV 150
N+ +++ M+S G Y F R P++Y I+ C D
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVV----FLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
V ++ + K G D DVY+G+ L++ YLK ++ A VF+ LP + V W M++G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++G + +L++F ++ ++ + + ++ VLSA ++ F + G+ +H +++ G +
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+MN LID Y K V A ++F M K+I SW ++++ ++Q H + LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +PD+ S++L +C+ L AL G Q+H Y + L +D ++ N+L+DMY
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG--------NDSYVTNSLIDMYA 396
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGY---GMDGQGKEALDMFSCMCEAKLKPDEVT 447
KC + DA+ VF + DV +N MI GY G + EAL++F M ++P +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FV +L A + L ++ LM +YG+ I + +ID+ L ++ L
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDS-RLVFDE 514
Query: 508 PNEANPVVWRTLLAA 522
+ V+W ++ A
Sbjct: 515 MKVKDLVIWNSMFAG 529
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/591 (34%), Positives = 319/591 (53%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L KG ++HS+ ++ G+ + SL+++YSKC ++ A F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N+ +N M+ + D + F M+ G++P+++T+P +++ C + A+
Sbjct: 424 ETE-NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLG 482
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G L+VY+ S L++ Y K + AL++ LP DVV W AM+ GY Q
Sbjct: 483 EQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQH 542
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +AL++F M GI +SA + + G+ +H G+ + + +
Sbjct: 543 DMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSIN 602
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALI +Y + + EA FE + +K+ SWNS+++ Q G + L++F RML +
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
++ T+ + + A + LA + G+QIH ++ G ++N+L+ +Y K G
Sbjct: 663 VNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSERE--------VSNSLISLYAKSG 714
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ DA F MS+++V SWN MI GY G G EAL +F M + P+ VTFVGVLS
Sbjct: 715 SISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLS 774
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G ++ M + +VP EHY CV+D+LGRAGQL+ A E MP A+
Sbjct: 775 ACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADA 834
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++WRTLL+A +H N ++ E AA + +LEP YVL+SNIY ++ R M
Sbjct: 835 MIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLM 894
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V+K PG SWIE+K+ +H F + D+ HP IY + L R E G
Sbjct: 895 KDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIG 945
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 253/514 (49%), Gaps = 20/514 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIAS---LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
F ++ F P+ L++ +++ +QL + G+++H +++ G L
Sbjct: 249 FCDMHASEIFPTPYVLSSVLSASTKIQL------FELGEQLHCLVIKWGFHSETYVCNGL 302
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ +YS+ ++ A +F+ ++ V +YN++ISG F+ + L+ F M++ + PD
Sbjct: 303 VALYSRSRKLISAERIFSTMNSRDGV-SYNSLISGLVQQGFSDRALELFTKMQRDCLKPD 361
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
T L+ C V A+ + ++H K G+ D+ + +L++ Y KC +E A K F
Sbjct: 362 CITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFL 421
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++VLWN M+ Y Q+ + E+FR+M EG+ ++FT +L +G
Sbjct: 422 XTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYL 481
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +H V+K G+ V V + LIDMY K + AL I + E D+ SW +++ + Q
Sbjct: 482 GEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQ 541
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
L+LF+ M G Q D + F++ + AC+ + AL G+QIH G
Sbjct: 542 HDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA---- 597
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D+ +NNAL+ +Y +CG +++A + F K+ K+ SWN ++ G G +EAL +F
Sbjct: 598 ----DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + + + T+ +SA + + QG++ + M + G E +I + +
Sbjct: 654 VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ-IHSMVLKTGYDSEREVSNSLISLYAK 712
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+G +++A+ M +E N + W ++ HG
Sbjct: 713 SGSISDAWREFNDM-SERNVISWNAMITGYSQHG 745
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/494 (28%), Positives = 246/494 (49%), Gaps = 22/494 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L + +H + ++G PL I SL++ Y + A+ VF+ S +
Sbjct: 65 LEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENS-NRS 123
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD-VMAVLEVKKIH 157
VF++N MI F + F+ F M G+ P+ YTF ++K C +A VK++H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
F G D + + L++ Y K ++E A KVF + ++D+V W AM++G +Q G
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +F M I+ + + ++ VLSA + F+ G +H +V+K G+ S V N L+
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y + + + A IF M +D S+NS+++ Q G D L LF +M +PD +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +++L AC+ + AL G Q+H + + G++ D+ + +L+D+Y+KC +
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSA--------DIILEGSLLDLYSKCADVET 415
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F +++ WN+M++ YG ++ ++F M + P++ T+ +L C+
Sbjct: 416 AHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTS 475
Query: 458 SGFLSQGREFLPLMESRYGVVPT---IEHYTC--VIDMLGRAGQLNEAYELALAMPNEAN 512
G L G + V+ T + Y C +IDM + GQL A + +P E +
Sbjct: 476 LGALYLGEQI------HTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDD 528
Query: 513 PVVWRTLLAASRLH 526
V W ++A H
Sbjct: 529 VVSWTAMIAGYVQH 542
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/593 (25%), Positives = 265/593 (44%), Gaps = 28/593 (4%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+++HS G SPL LI++YSK ++ A VFN + C ++ T+ AMISG
Sbjct: 180 KQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCI-CMKDIVTWVAMISGLSQ 238
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N + + F M + P Y ++ + +++H LV K G + Y+
Sbjct: 239 NGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYV 298
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ LV Y + + + A ++F + RD V +N++++G Q G +ALE+F +M ++ +
Sbjct: 299 CNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCL 358
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
TV +LSA +G G +H +K G + + + +L+D+Y K V A +
Sbjct: 359 KPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHK 418
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E ++I WN ++ + Q N + +F +M G P+ T+ ++L C+ L A
Sbjct: 419 FFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGA 478
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH +++ G N V++ + L+DMY K G + A + ++ + DV
Sbjct: 479 LYLGEQIHTHVIKTGFQLN--------VYVCSVLIDMYAKYGQLALALRILRRLPEDDVV 530
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY EAL +F M ++ D + F +SAC+ L QG++ +
Sbjct: 531 SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQ-IHAQ 589
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + +I + R G++ EAY LA + N + W +L++ G +
Sbjct: 590 SYAAGFGADLSINNALISLYARCGRIQEAY-LAFEKIGDKNNISWNSLVSGLAQSGYFEE 648
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
A R+ + E N++ G N+++ + LK
Sbjct: 649 ALQVFVRMLRTEAE--------VNMFTYGSAISA------AASLANIKQGQQIHSMVLKT 694
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKH 644
G + S S+YA+ S++ RE D + ++ +G+ +H
Sbjct: 695 G---YDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQH 744
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 199/423 (47%), Gaps = 12/423 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K + N M + GV + + L++ C ++ E ++H + K G D + + +LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y + A+KVF+E R V WN M++ + + +FRRM EGI + +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 237 TVTGVLSALIMMGF-FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T GVL A + F + VH G+DS V N LID+Y K + A ++F
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ KDI +W ++++ Q G + + LF M ++ P S+VL A + + G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
Q+H ++ G + ++ N L+ +Y++ + A+ +F+ M+ +D S+N
Sbjct: 281 EQLHCLVIKWGFHS--------ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I G G AL++F+ M LKPD +T +LSAC+ G L +G + L +
Sbjct: 333 LISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQ-LHSHAIKA 391
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA-SRLHGNTDLAEI 534
G+ I ++D+ + + A++ L E N V+W +L A +L +D EI
Sbjct: 392 GMSADIILEGSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVAYGQLDNLSDSFEI 450
Query: 535 AAQ 537
Q
Sbjct: 451 FRQ 453
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/610 (33%), Positives = 333/610 (54%), Gaps = 13/610 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEP 97
L A +L+ +IHS ++ T S +I +L+ +Y+KC + + L +FN
Sbjct: 104 LNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPST 163
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV T+ +I+ ++ F+ L FFN MR G+ P+ +TF ++ C + E ++IH
Sbjct: 164 NVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIH 223
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L+ K D ++ +AL++ Y KC M A VF+E+P R++V WN+M+ G+ + +
Sbjct: 224 ALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYG 283
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ VFR + G + +++ VLSA + G+ VHG +VK G V V N+L+
Sbjct: 284 RAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLV 341
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K +A ++F ++D+ +WN ++ +C N + F M+ G +PD
Sbjct: 342 DMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEA 401
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
++S++ A + +AAL G IH +++ G KN ++++L+ MY KCGSM D
Sbjct: 402 SYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSR--------ISSSLVTMYGKCGSMLD 453
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF + + +V W MI + G EA+ +F M + P+ +TFV VLSACSH
Sbjct: 454 AYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSH 513
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + G ++ M + + + P +EHY C++D+LGR G+L EA +MP E + +VW
Sbjct: 514 TGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWG 573
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A H N ++ A+R+F+LEP + GNY+L+SNIY+ G EE ++R M
Sbjct: 574 ALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGING 633
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDST 637
VRK GCSWI++K+ F ++DRSH + IY L L ++ G A T F ++S
Sbjct: 634 VRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRG-YVAETQFATNSV 692
Query: 638 ASGFEKHRLY 647
G E+ L+
Sbjct: 693 -EGSEEQSLW 701
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 242/509 (47%), Gaps = 52/509 (10%)
Query: 1 MLSKISRIN-PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
+++++SR N PF + F+ + + FT + A L CAH L +GQ+IH+ +
Sbjct: 171 LINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFS---AILPACAHAALLSEGQQIHALIH 227
Query: 60 RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
+ ++ P T+L++MY+KC M A VF+ + N+ ++N+MI GF N + +
Sbjct: 228 KHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMP-HRNLVSWNSMIVGFVKNKLYGRAI 286
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F + LG PD+ + ++ C ++ + K++HG + K GL VY+ ++LV+ Y
Sbjct: 287 GVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMY 344
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
KC E+A K+F RDVV WN M+ G + F +A F+ M +EG+ + +
Sbjct: 345 CKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYS 404
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ A + G ++H V+K G+ + ++L+ MYGK + +A ++F +E
Sbjct: 405 SLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEH 464
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
++ W +++TV Q G + ++LF+ ML+ G P+ +TF +VL ACSH G+
Sbjct: 465 NVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHT-----GKIDD 519
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
G+ N +A ++ ++ K + + M+
Sbjct: 520 GFKYFNSMA------NVHNI---------------------------KPGLEHYACMVDL 546
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G G+ +EA M +PD + + +L AC + GRE + E + + P
Sbjct: 547 LGRVGRLEEACRFIESM---PFEPDSLVWGALLGACGKHANVEMGRE---VAERLFKLEP 600
Query: 480 -TIEHYTCVIDMLGRAGQLNEAYELALAM 507
+Y + ++ R G L EA E+ M
Sbjct: 601 DNPGNYMLLSNIYIRHGMLEEADEVRRLM 629
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 222/695 (31%), Positives = 339/695 (48%), Gaps = 119/695 (17%)
Query: 40 QLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
Q C H + + +H++M+ +G + LI++Y K + A +F+ + +P+
Sbjct: 22 QCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIR-QPD 80
Query: 99 VFT---------------------------------YNAMISGFYSNDFAFKGLDFFNHM 125
+ YNAMI+G+ N+ F ++ F +
Sbjct: 81 IVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL 140
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMA-VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
+ G PD +TF ++ ++ + ++IH V K G + +AL++ ++KC
Sbjct: 141 LRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCAS 200
Query: 185 ---------MEEALKVFEELPLRD-------------------------------VVLWN 204
M A K+F+E+ RD VV WN
Sbjct: 201 SPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWN 260
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM++GY G F +ALE+FR+M GI FT T VLSA GFF +G+ VH +++
Sbjct: 261 AMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320
Query: 265 ----GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG- 319
D + V NAL +Y K V EA ++F M KD+ SWN+I++ + G D
Sbjct: 321 EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEA 380
Query: 320 ------------------------------TLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+L+LF+RM S GF+P F+ + AC+ L
Sbjct: 381 KSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWL 440
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AALMHGRQ+H +V G + S NAL+ MY KCG + A +F M D
Sbjct: 441 AALMHGRQLHAQLVRLGFDSSLSA--------GNALITMYAKCGVVEAAHCLFLTMPYLD 492
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SWN MI G G G +AL++F M + + PD +TF+ VLS CSH+G + +G +
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFK 552
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M YG+ P +HY +ID+L RAG+ +EA ++ MP E P +W LLA R+HGN
Sbjct: 553 SMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNM 612
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
DL AA+R+F+L P H G YVL+SN+Y G++++V +R MR + V+K PGCSWIE+
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++ +H F+ D HPE +++Y L L ++R+ G
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLG 707
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 144/338 (42%), Gaps = 36/338 (10%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRT---GIIDSPLSI-TSLINMYSKCCQMKYALFV 89
T + L CA+ G+++H+Y+LRT +D LS+ +L +Y KC ++ A V
Sbjct: 293 TYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQV 352
Query: 90 FNNLSC------------------------------EPNVFTYNAMISGFYSNDFAFKGL 119
FN + E N+ T+ MISG N F + L
Sbjct: 353 FNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESL 412
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
FN M+ G P Y F I C + A++ +++H + +LG D + G+AL+ Y
Sbjct: 413 KLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMY 472
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
KC +E A +F +P D V WNAM+ Q G +ALE+F M KE I R T
Sbjct: 473 AKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFL 532
Query: 240 GVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME- 297
VLS G + G R + G G +ID+ + EA ++ E M
Sbjct: 533 TVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPV 592
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
E W +++ GN D ++ +R+ Q D
Sbjct: 593 EPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHD 630
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
FN S G + ++ F ++ CA L G+++H+ ++R G S + +LI
Sbjct: 415 FNRMKSEGFEPCDYAFA-----GAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALI 469
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MY+KC ++ A +F + +V ++NAMI+ + + L+ F M + +LPD+
Sbjct: 470 TMYAKCGVVEAAHCLFLTMPYLDSV-SWNAMIAALGQHGHGAQALELFELMLKEDILPDR 528
Query: 135 YTFPCLIKCCCDVMAVLE----VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
TF ++ C V E K + GL + + D Y + +++ + EA
Sbjct: 529 ITFLTVLSTCSHAGLVEEGHRYFKSMSGL-YGICPGEDHY--ARMIDLLCRAGKFSEAKD 585
Query: 191 VFEELPLRD-VVLWNAMVNG 209
+ E +P+ +W A++ G
Sbjct: 586 MIETMPVEPGPPIWEALLAG 605
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 319/591 (53%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L G++ HSY ++ G+ + +L+++Y KC +K A F +
Sbjct: 374 TVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLST 433
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV +N M+ + D + F M+ G+ P+++T+P +++ C + AV
Sbjct: 434 ETE-NVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG 492
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G +VY+ S L++ Y K ++ ALK+F L +DVV W AM+ GYAQ
Sbjct: 493 EQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQH 552
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+F +AL +F+ M +GI +SA + G+ +H GY + V
Sbjct: 553 EKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVG 612
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+ +Y + V +A F+ + KD SWNS+++ Q G+ + L LF +M AG +
Sbjct: 613 NALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQE 672
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ TF + A +++A + G+QIH I+ G + ++N L+ +Y KCG
Sbjct: 673 INSFTFGPAVSAAANVANVKLGKQIHAMIIKTG--------HDSETEVSNVLITLYAKCG 724
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ DA+ F +M +K+ SWN M+ GY G G +AL +F M + + P+ VTFVGVLS
Sbjct: 725 NIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLS 784
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G ++ M +G+VP EHY CV+D+LGR+G L+ A MP + +
Sbjct: 785 ACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDA 844
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+V RTLL+A +H N D+ E AA + +LEP YVL+SN+Y GK+ R M
Sbjct: 845 MVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMM 904
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + V+K PG SWIE+ + +H F + D+ HP IY L L E+G
Sbjct: 905 KDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENG 955
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 247/500 (49%), Gaps = 14/500 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C + G+++H +L+ G +L+ +YS+ A
Sbjct: 271 PYIFSSVLSA---CTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VFN + V +YN++ISG ++ K L+ F M + PD T L+ C V
Sbjct: 328 VFNAMLQRDEV-SYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVG 386
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+L K+ H K G+ D+ + AL++ Y+KC ++ A + F +VVLWN M+
Sbjct: 387 ALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLV 446
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + +++ ++F +M EGI ++FT +L + G +H V+K G+
Sbjct: 447 AYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF 506
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V + LIDMY K + AL+IF ++EKD+ SW +++ + Q L LF M
Sbjct: 507 NVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQ 566
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G D + F++ + AC+ + AL G+QIH V+G + DD+ + NAL+ +
Sbjct: 567 DQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYS--------DDLSVGNALVSL 618
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG +RDA F K+ KD SWN +I G+ G +EAL +FS M +A + + TF
Sbjct: 619 YARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTF 678
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+SA ++ + G++ + M + G E +I + + G +++A MP
Sbjct: 679 GPAVSAAANVANVKLGKQ-IHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP 737
Query: 509 NEANPVVWRTLLAASRLHGN 528
E N + W +L HG+
Sbjct: 738 -EKNEISWNAMLTGYSQHGH 756
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/486 (27%), Positives = 242/486 (49%), Gaps = 12/486 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C G ++H +L+ G + L+++Y + A+ VF+ + P +
Sbjct: 78 CLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRP-LSC 136
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLV 160
+N ++ F + A + L F M Q V PD+ T+ +++ C V+KIH
Sbjct: 137 WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHART 196
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
G + +++ + L++ Y K F+ A KVF+ L RD V W AM++G +Q G +A+
Sbjct: 197 ITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAV 256
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F +M G++ + + + VLSA + F+K G +HG+V+K G+ V NAL+ +Y
Sbjct: 257 LLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLY 316
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ A ++F M ++D S+NS+++ Q G D L LF +M +PD VT +
Sbjct: 317 SRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVA 376
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++L ACS + AL+ G+Q H Y + G++ D+ + AL+D+Y KC ++ A
Sbjct: 377 SLLSACSSVGALLVGKQFHSYAIKAGMS--------SDIILEGALLDLYVKCSDIKTAHE 428
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
F ++V WN+M++ YG+ E+ +F+ M ++P++ T+ +L CS
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + + + G + + +IDM + G+L+ A ++ + E + V W ++
Sbjct: 489 VDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRL-KEKDVVSWTAMI 546
Query: 521 AASRLH 526
A H
Sbjct: 547 AGYAQH 552
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 236/481 (49%), Gaps = 11/481 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ + G +S LI++Y K + A VF+ L +V ++ AM+SG
Sbjct: 190 EKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSV-SWVAMLSGLSQ 248
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + + F M GV P Y F ++ C V +++HGLV K G L+ Y+
Sbjct: 249 SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV 308
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV Y + A +VF + RD V +N++++G +Q G KALE+F++M + +
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
TV +LSA +G G+ H +K G S + + AL+D+Y K + A E
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E +++ WN ++ + N + + ++F +M G +P+ T+ ++L CS L A
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+ G QIH ++ G N V++++ L+DMY K G + A +F ++ +KDV
Sbjct: 489 VDLGEQIHTQVLKTGFQFN--------VYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVV 540
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY + EAL++F M + + D + F +SAC+ L+QG++ +
Sbjct: 541 SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQ-IHAQ 599
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + ++ + R G++ +AY A + + W +L++ G+ +
Sbjct: 600 ACVSGYSDDLSVGNALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLISGFAQSGHCEE 658
Query: 532 A 532
A
Sbjct: 659 A 659
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 35/320 (10%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + G+ + T +L + G+F +G +HG ++KMG+ + V + L+D+Y
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A+ +F+ M + + WN ++ L LF RML +PD T++ VL
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG 178
Query: 346 CS------HLAALMHGRQI-HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
C H +H R I HGY + +F+ N L+D+Y K G + A
Sbjct: 179 CGGGDVPFHCVEKIHARTITHGY--------------ENSLFVCNPLIDLYFKNGFLNSA 224
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF + K+D SW M+ G G +EA+ +F M + + P F VLSAC+
Sbjct: 225 KKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284
Query: 459 GFLSQGREFLPLMESRYGVVP----TIEHYTC--VIDMLGRAGQLNEAYELALAMPNEAN 512
EF + E +G+V ++E Y C ++ + R G A ++ AM + +
Sbjct: 285 -------EFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML-QRD 336
Query: 513 PVVWRTLLAASRLHGNTDLA 532
V + +L++ G +D A
Sbjct: 337 EVSYNSLISGLSQQGYSDKA 356
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 204/621 (32%), Positives = 339/621 (54%), Gaps = 12/621 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++++ CA +L G+++H+ +++ + +L+ MYSK + +F + +
Sbjct: 151 SAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIR-D 209
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEV-K 154
++F++ ++I+G L F M G+ P+++ F + + C V+ LE +
Sbjct: 210 KDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGE 269
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IHGL K LD + Y G +L + Y +C ++ A+KVF + D+V WN+++N ++ G
Sbjct: 270 QIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADG 329
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A+ +F M + TV +L A + + GR +H +VK+G V V N
Sbjct: 330 LLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCN 389
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LI MY + A+++F ++D+ +WNSI+T Q + + +LF + S+
Sbjct: 390 SLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSL 449
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D ++ + VL A + L +Q+H Y GL + D ++NAL+D Y KCGS
Sbjct: 450 DRISLNNVLSASAELGYFEMAKQVHAYAFKVGL--------VSDAILSNALIDTYAKCGS 501
Query: 395 MRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DA +F M + +DV SW+ +I+GY G KEALD+F+ M +KP+ VTFVGVL
Sbjct: 502 LDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLI 561
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACS G + +G + +ME YG+VPT EH +CVID+L RAG+L+EA + MP E +
Sbjct: 562 ACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDI 621
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
++W TLLAASR H + ++ + AA+ V ++P H YVL+ NIY + G + E ++ M
Sbjct: 622 IMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDM 681
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFD 633
R V+K+PG SWI+LK L FI DRSHPE+ +Y L + + + G + +
Sbjct: 682 RSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAGYIPELSCYS 741
Query: 634 SDSTASGFEKHRLYLEEVIAK 654
+S + L EE++A+
Sbjct: 742 RKYISSDHTYYDLLSEEMLAE 762
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 235/527 (44%), Gaps = 19/527 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-----LINMYSKCCQM 83
P + A A + C+ + +G+ +H ++L + + L+ + LI MY +C
Sbjct: 37 PLSAAAYAALVAACSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAP 96
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+ + + N ++ A+I+ N + F+ M +LG PD++ ++
Sbjct: 97 DSARMVFDGM-LDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRA 155
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C ++ + +++H K + + +ALV Y K + + +FE + +D+ W
Sbjct: 156 CAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSW 215
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSAL-IMMGFFKNGRVVHGIV 261
+++ G AQ G AL +FR M EG+ + F V A +++ + G +HG+
Sbjct: 216 GSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLC 275
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
VK D +L DMY + + A+++F +E D+ SWNS++ G +
Sbjct: 276 VKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAM 335
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF M + +PD +T +L AC AL GR IH Y+V GL DV +
Sbjct: 336 VLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGG--------DVMV 387
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
N+L+ MYT+C A VF + + +DV +WN ++ ++ +F + +
Sbjct: 388 CNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMP 447
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
D ++ VLSA + G+ ++ + + G+V +ID + G L++A
Sbjct: 448 SLDRISLNNVLSASAELGYFEMAKQ-VHAYAFKVGLVSDAILSNALIDTYAKCGSLDDAN 506
Query: 502 ELALAMPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
+L M + W +L+ A + L A R ++P H
Sbjct: 507 KLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNH 553
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 20/592 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C A+L CA L+ G+++HS +R G + LI MYS+C + A VF+ +
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
Query: 94 SCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
P+V Y ++IS F N +F ++Q G+ P+++T ++ C V+
Sbjct: 176 D-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ-GLKPNEHTMTTILTACPRVLG--- 230
Query: 153 VKKIHG-LVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IHG L+ K+GL VY +AL++ Y + + A VF+ L ++VV W +M+ Y
Sbjct: 231 -QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ G +AL+VF M EG+ + F ++ VL A +G GR +H +K + +
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDI 346
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL+ MYG+ V E + +E D+ SW + ++ + Q G + + L +M S
Sbjct: 347 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 406
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF P+ FS+VL +C+ +A+L G Q H LA C ++ NAL++MY+
Sbjct: 407 GFTPNGYAFSSVLSSCADVASLDQGMQFHC------LALKLGCDS--EICTGNALINMYS 458
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M A++ F M DV SWN +I G+ G +AL++FS M +KPD+ TF+G
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL C+HSG + +G F LM +Y P HY C+IDMLGR G+ +EA + MP E
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ ++W+TLLA+ +LH N D+ ++AA R+ +L +YVLMSNIY G++E+ +R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
M + V+K+ GCSWIE+ + +HTF S D SHP + SIY L L A +++
Sbjct: 639 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 224/461 (48%), Gaps = 20/461 (4%)
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+N K ++ AL +F+ + NV + +++SG+ N L F M + GV P+
Sbjct: 55 LNRLVKSGRLADALDLFDRMP-RKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPN 113
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ + C D+ A+ +++H L + G D +IGS L+ Y +C + A +VF+
Sbjct: 114 DFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFD 173
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+ DVV + ++++ + + GEF A E +M K+G+ + T+T +L+A +
Sbjct: 174 RMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 254 GRVVHG-IVVKMGYDS-GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
G+ +HG ++ K+G S V ALID Y + A +F+ + K++ SW S+M ++
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G + L++F M+S G P+ S VL AC + GRQ+H + + L
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDL---- 342
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
I D+ ++NAL+ MY + G + + + + K+ D+ SW I +G G++A+
Sbjct: 343 ----ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+ M P+ F VLS+C+ L QG +F + + G I +I+M
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF-HCLALKLGCDSEICTGNALINMY 457
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ GQ+ A LA + + + W +L+ HG+ + A
Sbjct: 458 SKCGQMGSA-RLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 497
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 179/360 (49%), Gaps = 15/360 (4%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV + +N +K + +AL +F+ +P ++VV W ++++GY + G AL +F M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ + F L A +G + G VH + V+ G+ + + LI+MY + +
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A E+F+ M+ D+ + S+++ + G + +ML G +P+ T +T+L AC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ G+QIHGY++ ++ S V+ + AL+D Y++ G + A+ VF +
Sbjct: 227 RVL----GQQIHGYLIKKIGLRSQS------VYSSTALIDFYSRNGEFKLAKAVFDSLHC 276
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+V SW M+ Y DG+ +EAL +F M + P+E VL AC G + GR+
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQ- 332
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L ++ ++ I ++ M GR G L E E L + V W T ++A+ +G
Sbjct: 333 LHCSAIKHDLITDIRVSNALLSMYGRTG-LVEELEAMLNKIENPDLVSWTTAISANFQNG 391
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
A + C + DV + ++ K G + DA +F +M +K+V +W ++ GY +G+ +
Sbjct: 37 AADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPE 96
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
AL MF+ M E+ + P++ L AC+ G L G + L R G +C+
Sbjct: 97 AALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSL-AVRAGFAGDAWIGSCL 155
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPG 545
I+M R G L A E+ M + + V + +L++A +G +LA A ++ + L+P
Sbjct: 156 IEMYSRCGSLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPN 214
Query: 546 -HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
H +L + V G + L + +R Q+V + L F S +
Sbjct: 215 EHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSST---------ALIDFYSRNGEFK 265
Query: 605 EAKSIYAELH 614
AK+++ LH
Sbjct: 266 LAKAVFDSLH 275
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 317/574 (55%), Gaps = 10/574 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G +H Y+++ G +LI+ Y+K +++ AL VF+ + + ++ ++N++I G
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMP-QRDIISWNSIIGGCA 61
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
SN K ++ F M G D T ++ C +HG + GL +
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+AL++ Y C K+F + ++VV W AM+ Y + G F K +F+ M EG
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I F +T L A K+G+ VHG ++ G + +PV NAL++MY K + EA
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
IF+ + +KD SWN+++ + + + LF+ ML +P+ VT + +LPA + L+
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L GR++H Y V G ++D F+ NAL+DMY KCG++ A+ +F ++ K++
Sbjct: 301 SLERGREMHAYAVRRGY--------LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNL 352
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW IMI GYGM G+G++A+ +F M + ++PD +F +L ACSHSG +G F
Sbjct: 353 ISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNA 412
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M + + + P ++HY C++D+L G L EAYE MP E + +W +LL R+H N
Sbjct: 413 MRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVK 472
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
LAE A+ VF+LEP + G YVL++NIY ++E V +++ + + +R+N GCSWIE++
Sbjct: 473 LAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVR 532
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F + +R+HP+ I L + R++E G
Sbjct: 533 GKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEG 566
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 141/310 (45%), Gaps = 15/310 (4%)
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
+G VVHG +VK G+ + V NALI Y K + +AL +F+ M ++DI SWNSI+
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G +D + LF RM G + D T +V+PAC G +HGY V GL
Sbjct: 62 SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGL----- 116
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
I + + NAL+DMY+ C R +F M +K+V SW MI Y G + +
Sbjct: 117 ---ISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGL 173
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M ++PD L A + + L G+ + R G+ + +++M
Sbjct: 174 FQEMGLEGIRPDVFAITSALDAFAGNESLKHGKS-VHGYAIRNGIEEVLPVANALMEMYV 232
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAA-SRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
+ G + EA + + + W TL+ SR + + + + + QL P N V
Sbjct: 233 KCGYMEEA-RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRP----NAV 287
Query: 552 LMSNIYVAGG 561
M+ I A
Sbjct: 288 TMACILPAAA 297
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 135/280 (48%), Gaps = 16/280 (5%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L A +L+ G+ +H Y +R GI + +L+ MY KC M+ A F+F++++ +
Sbjct: 191 SALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVT-K 249
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ ++N +I G+ ++ A + FN M L + P+ T C++ + ++ +++
Sbjct: 250 KDTISWNTLIGGYSRSNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREM 308
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + G D ++ +ALV+ Y+KC + A ++F+ L ++++ W M+ GY G
Sbjct: 309 HAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRG 368
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-------FFKNGRVVHGIVVKMGYDSG 269
A+ +F +M GI + + +L A G FF R H I K+ + +
Sbjct: 369 RDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYA- 427
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ + EA E E M E D W S++
Sbjct: 428 -----CMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLL 462
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
++ SR N + F Q + T+A CI L A ++L++G+E+H+Y +R
Sbjct: 258 LIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMA-CI--LPAAASLSSLERGREMHAYAVR 314
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G ++ +L++MY KC + A +F+ L+ N+ ++ MI+G+ + +
Sbjct: 315 RGYLEDNFVANALVDMYVKCGALLLARRLFDMLT-NKNLISWTIMIAGYGMHGRGRDAIA 373
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCC 144
F M+ G+ PD +F ++ C
Sbjct: 374 LFEQMKGSGIQPDAGSFSAILYAC 397
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 343/652 (52%), Gaps = 73/652 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+LC N K + +HS++++T + +LI+ Y+K + YA VF+ +
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP-H 72
Query: 97 PNVFTYN-------------------------------AMISGFYSNDFAFKGLDFFNHM 125
PN++++N ++ISG+ ++ + +N M
Sbjct: 73 PNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLM 132
Query: 126 -RQLGVLP-DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
+ G ++ TF L+ V ++IHG V K G V++GS LV+ Y K
Sbjct: 133 LKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMG 192
Query: 184 FMEEALKVFEELPLRDVVL-------------------------------WNAMVNGYAQ 212
+ A KVF+ELP ++VV+ W +M+ G+ Q
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G A+++FR M E + M ++T VL+A + + G+ VH +++ Y + V
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+AL+DMY K K + A +F+ M K++ SW +++ + Q G + ++ F M G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD T +V+ +C++LA+L G Q H + +GL I + ++NAL+ +Y KC
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGL--------ISFITVSNALVTLYGKC 424
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ D+ +F ++S KD +W ++ GY G+ E + +F M LKPD+VTF+GVL
Sbjct: 425 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVL 484
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACS +G + +G + M + +G+VP +HYTC+ID+ RAG++ EA MP +
Sbjct: 485 SACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPD 544
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+ W TLL++ R +GN D+ + AA+ + +L+P + +YVL+S++Y A GK+EEV +R
Sbjct: 545 AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKD 604
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + +RK PGCSWI+ K+ +H F + D+S+P + IY+EL L ++ + G
Sbjct: 605 MRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEG 656
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 46/274 (16%)
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +L C + +H +I+ + F+ N L+ Y K GS+ A
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHII--------KTLPYPETFLLNNLISSYAKLGSIPYA 63
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK------------------ 440
VF +M ++ SWN ++ Y G+ E +F M
Sbjct: 64 CKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIY 123
Query: 441 ---------LKPD------EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
LK D +TF +L S G + GR+ + ++G + + +
Sbjct: 124 QSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHV-VKFGFMSYVFVGS 182
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
++DM + G ++ A ++ +P E N V++ TL+ G E + + F++
Sbjct: 183 PLVDMYSKMGMISCARKVFDELP-EKNVVMYNTLIMGLMRCGRV---EDSKRLFFEMRER 238
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
++ M + G + +DI M+ +N++
Sbjct: 239 DSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 272
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 209/604 (34%), Positives = 321/604 (53%), Gaps = 21/604 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQK-GQEIHSYMLRTGIIDSPLS---ITSLINMYSKCCQMK 84
PF +ASL A T + G+ H+ +++T +D+PL L+NMYSK +
Sbjct: 2 PFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPN 59
Query: 85 YALFVFNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
A + LS PN V T+ A+I+G N L F++MR+ + P+ +TFPC K
Sbjct: 60 SAQLL---LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFK 116
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
+ + L K++H L K G DV++G + + Y K EEA K+F+E+P R++
Sbjct: 117 ASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIAT 176
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNA ++ G + AL F EG + T L+A + + GR +HG V+
Sbjct: 177 WNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVL 236
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ G+++ V V N LID YGK VG + IF + + + SW S++ + Q +
Sbjct: 237 QSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACL 296
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F R G +P S+VL AC+ L+ L G+ +H V + N +F+
Sbjct: 297 VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGN--------IFVG 348
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC--EAK 440
+AL+DMY KCGS+ DA+ F +M ++++ +WN MI GY GQ A+ +F M +
Sbjct: 349 SALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHR 408
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ P+ VTFV VLSACS +G ++ G E M RYG+ P EHY CV+D+LGRAG + +A
Sbjct: 409 VAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQA 468
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
Y+ MP VW LL AS++ G ++L ++AA +F+L+P GN+VL+SN++ A
Sbjct: 469 YQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAA 528
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
G++EE +R M+ ++K GCSWI + +H F + D SH I A L L +
Sbjct: 529 GRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEM 588
Query: 621 REHG 624
G
Sbjct: 589 EAAG 592
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 319/578 (55%), Gaps = 42/578 (7%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+++ + +HS + ++P L+ Y+ + A VF+ + E NV YN MI
Sbjct: 47 DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIP-ERNVIFYNVMI 105
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+ +N L F M G PD YT+PC++K C + ++HG VFK+GLD
Sbjct: 106 RSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLD 165
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
L++++G+ L+ Y KC + EA V +E+ +DVV WN+MV GYAQ +F AL++ R M
Sbjct: 166 LNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM 225
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
G+ K + ++ A+ + +
Sbjct: 226 D-------------------------------GVRQKPDACTMASLLPAVTNTSSENVLY 254
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
E E+F +E+K + SWN +++V+ + ++ L+ +M +PD +T ++VL AC
Sbjct: 255 VE--EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
L+AL+ GR+IH Y+ L N + + N+L+DMY +CG + DA+ VF +M
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPN--------MLLENSLIDMYARCGCLEDAKRVFDRMK 364
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+DVASW +I YGM GQG A+ +F+ M + PD + FV +LSACSHSG L++G+
Sbjct: 365 FRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKF 424
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ M Y + P IEH+ C++D+LGR+G+++EAY + MP + N VW LL++ R++
Sbjct: 425 YFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVY 484
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
N D+ +AA ++ QL P G YVL+SNIY G++ EV IR M+++ +RK PG S
Sbjct: 485 SNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISN 544
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+EL + +HTF++ D HP++K IY EL L +++E G
Sbjct: 545 VELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELG 582
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 36/319 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ NL+ G ++H + + G+ + LI +Y KC + A V + + + +
Sbjct: 140 LKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSK-D 198
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+M++G+ N LD M + PD T L+
Sbjct: 199 VVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLL----------------- 241
Query: 159 LVFKLGLDLDVYIGSALVNTYLK-CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
A+ NT + ++EE +F L + +V WN M++ Y +
Sbjct: 242 --------------PAVTNTSSENVLYVEE---MFMNLEKKSLVSWNVMISVYMKNSMPG 284
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
K+++++ +M K + T VL A + GR +H V + + + N+LI
Sbjct: 285 KSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLI 344
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY + C+ +A +F+ M+ +D+ SW S+++ + G + LF M ++G PD +
Sbjct: 345 DMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404
Query: 338 TFSTVLPACSHLAALMHGR 356
F +L ACSH L G+
Sbjct: 405 AFVAILSACSHSGLLNEGK 423
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC + L+ C + L G+ IH Y+ R + + L SLI+MY++C ++ A VF+ +
Sbjct: 304 TCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRM 363
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++ ++IS + + + F M+ G PD F ++ C + E
Sbjct: 364 KFR-DVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG 422
Query: 154 KKIHGLVFKLGLDLDVYIG------SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
K FK D D I + LV+ + ++EA + +++P++ + +W A+
Sbjct: 423 K----FYFKQMTD-DYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGAL 477
Query: 207 VNG 209
++
Sbjct: 478 LSS 480
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 341/623 (54%), Gaps = 18/623 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ + NL +G+ +HS++++TG + + ++ MY KC ++ A VF+++ +PN
Sbjct: 124 LKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQ-DPN 182
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
VF++ +I+ + N + L + M Q GV PD YTF ++ C V A+ E K +H
Sbjct: 183 VFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHA 242
Query: 159 -LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ GLD D +G+AL+N Y KC +EEA VF ++ +D+V W++M+ +AQ G+
Sbjct: 243 ATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAK 302
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+++ M EG+ + T VL A+ + F+ G+ +H +V+ GY V + +AL+
Sbjct: 303 SAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALV 362
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY V A IFE E+D+ SW+S++ + Q + L LF M G QP+ V
Sbjct: 363 KMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSV 422
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF + + AC+ + AL G Q+H + GL K DV + AL+++Y KCG + +
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDK--------DVPVATALVNLYGKCGRLEE 474
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF M KK++ +W + + YG +G G +L + M +KPD + FV +L +C++
Sbjct: 475 AEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNY 534
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G +S+G + LM +G+ P +EH C++D+LGRAG+L A +L M E++ + W
Sbjct: 535 AGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESS-LAWM 593
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A + H +T A AA+++FQLEP + YVL+S+++ A G +E + R M +
Sbjct: 594 MLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRG 653
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPE--AKSIYAELHSLTARLREHG---DCCAGTLF 632
V++ G S IE+ D +H F+++ P I+A L L ++ G D A L
Sbjct: 654 VQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLR 713
Query: 633 DSDSTASGFEKHRLYLEEVIAKG 655
D + G E Y E++A G
Sbjct: 714 DVEE--GGKENAVPYHSEMLALG 734
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 253/522 (48%), Gaps = 20/522 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGII-----DSPLSITSLINMYSKCCQMKYA 86
++ C A L C+ L +G+ +H ++R ++ D L +I MY +C A
Sbjct: 10 ISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLA 69
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC-LIKCCC 145
L VF+ + + NV + ++IS F + F M GV PD+ TF L+K
Sbjct: 70 LDVFDRMK-DQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSG 128
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ E K++H + + G + D + + +V Y KC +E+A VF+ + +V W
Sbjct: 129 RERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTI 188
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KM 264
++ YAQ G + L + RM++ G+ +T T VL A +G + +++H +
Sbjct: 189 IIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISST 248
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G D V ALI++YGK + EA +F ++ KDI SW+S++ Q G ++L
Sbjct: 249 GLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLL 308
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M G +P+ VTF VL A + L A +G++IH IV G + DDV + +A
Sbjct: 309 MLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYS--------DDVCLTSA 360
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY G + A+ +F ++DV SW+ MI GY + AL +F M ++P+
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPN 420
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VTFV + AC+ G L +G + + G+ + T ++++ G+ G+L EA +
Sbjct: 421 SVTFVSAIDACAGVGALRRGTQLHERVRC-LGLDKDVPVATALVNLYGKCGRLEEAEAVF 479
Query: 505 LAMPNEANPVVWRTLLAA--SRLHGNTDLAEIAAQRVFQLEP 544
L M + N + W ++ A HG+ L + + ++P
Sbjct: 480 LGMKKK-NLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKP 520
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
Q ++ + +L ACS L AL G+++HG ++ L ++ + D+ + N ++ MY +
Sbjct: 6 IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQD---ERPDESLLENIVIQMYLR 62
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG A VF +M ++V +W +I + G +A+ +F M + + PD +TF +
Sbjct: 63 CGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSI 122
Query: 452 LSACS-HSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
L S L +G+ +M++ Y + V++M G+ G + +A + ++
Sbjct: 123 LLKWSGRERNLDEGKRVHSHIMQTGYEGDRMV--MNLVVEMYGKCGDVEQAGNVFDSI-Q 179
Query: 510 EANPVVWRTLLAASRLHGN 528
+ N W ++AA +G+
Sbjct: 180 DPNVFSWTIIIAAYAQNGH 198
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++++ CA L++G ++H + G+ D P++ T+L+N+Y KC +++ A VF
Sbjct: 423 TFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVA-TALVNLYGKCGRLEEAEAVFLG 481
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+ + N+ T+ ++ + N + L + M G+ PD F ++ C
Sbjct: 482 MK-KKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSC 532
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 332/557 (59%), Gaps = 13/557 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + ++ A +F+ + E +V + AMI+G+ S+++ + F+ M + G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMP-ERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGR 107
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF-MEEAL 189
P+++T ++K C ++ + +HG+V KLG++ +Y+ +AL+N Y C ME A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAF 167
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F ++ +++ V W ++ G+ +G+ L+++++M E ++ + +T + A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASID 227
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +H VVK G+ S +PVMN+++D Y + + EA F ME+KD+ +WN++++
Sbjct: 228 SVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLIS 287
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
E+ + + L +F R S GF P+ TF++++ AC+++AAL G+Q+HG I G K
Sbjct: 288 ELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNK 346
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKE 428
N V + NAL+DMY KCG + D++ VF ++ ++++ SW M++GYG G G E
Sbjct: 347 N--------VELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAE 398
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+++F M + ++PD + F+ VLSAC H+G + +G ++ +MES YG+ P + Y CV+
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL-AEIAAQRVFQLEPGHC 547
D+LGRAG++ EAYEL MP + + W +L A + H +T L + +AA++V +L+P
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMV 518
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
G YV++S IY A GK+ E +R MR +K G SWIE+++ + +F SD+ P A
Sbjct: 519 GTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQVFSFAVSDKMCPNAS 578
Query: 608 SIYAELHSLTARLREHG 624
S+Y+ L L +E G
Sbjct: 579 SVYSVLGLLIEETKEAG 595
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 15/360 (4%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L+ +Y + +EEA +F+E+P RDVV W AM+ GYA A E F M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQG 106
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE-A 289
+ FT++ VL + M G +VHG+VVK+G + + V NAL++MY E A
Sbjct: 107 RSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAA 166
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML--SAGFQPDLVTFSTVLPACS 347
IF ++ K+ +W +++T G+ G L+++ +ML +A P +T + + A +
Sbjct: 167 FLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIA--VRASA 224
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ ++ G+QIH +V G N + + N+++D Y +CG + +A+ F +M
Sbjct: 225 SIDSVTTGKQIHASVVKRGFQSN--------LPVMNSILDFYCRCGYLSEAKRYFHEMED 276
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ +WN +I EAL MF P+ TF +++AC++ L+ G++
Sbjct: 277 KDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQL 335
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R G +E +IDM + G + ++ + + N V W +++ HG
Sbjct: 336 HGRIYRR-GFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHG 394
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 195/391 (49%), Gaps = 15/391 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC-CQMKYALF 88
FTL++ + S C + L G +H +++ G+ S +L+NMY+ C M+ A
Sbjct: 112 FTLSSVLKS---CRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFL 168
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F ++ + +V T+ +I+GF GL + M Y ++ +
Sbjct: 169 IFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASID 227
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+V K+IH V K G ++ + +++++ Y +C ++ EA + F E+ +D++ WN +++
Sbjct: 228 SVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLIS 287
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ + +AL +F+R +G + +T T +++A + G+ +HG + + G++
Sbjct: 288 ELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNK 346
Query: 269 GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V + NALIDMY K + ++ +F E+ E +++ SW S+M + G + LFD+M
Sbjct: 347 NVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+S+G +PD + F VL AC H + G + N + D++ N ++D
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLK-----YFNVMESEYGINPDRDIY--NCVVD 459
Query: 388 MYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ + G + +A + +M K D ++W ++
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
++S++ R + + F + +T + +A+ CA+ L GQ++H + R
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAA---CANIAALNCGQQLHGRIYR 341
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G + +LI+MY+KC + + VF + N+ ++ +M+ G+ S+ + + ++
Sbjct: 342 RGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTY 179
F+ M G+ PD+ F ++ C V + +K + + + G++ D I + +V+
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 180 LKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ + EA ++ E +P + D W A++
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAIL 490
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/595 (32%), Positives = 326/595 (54%), Gaps = 18/595 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLS 94
+ ++ +C+ +L++GQ +H+ +L T +++ + + T+LI MY++C ++ A F+ +
Sbjct: 62 VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM---RQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + T+NA+I+G+ N L + M G+ PD TF + C V +
Sbjct: 122 -KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ ++I G D + +AL+N Y KC +E A KVF+ L RDV+ WN M++GYA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G +ALE+F+RM + T G+L+A + + GR +H V + GY+S +
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 272 VMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ N L++MY K + EA ++FE + +D+ +WN ++ + Q G L +F +M
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ +T S VL AC+ L A G+ +H I +G CK DV + N+LM+MY
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIA------SGRCKA--DVVLENSLMNMYN 412
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CGS+ D VF + K + SW+ +I Y G + L+ F + + L D+VT V
Sbjct: 413 RCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVS 472
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
LSACSH G L +G + M +G+ P H+ C++D+L RAG+L A L MP
Sbjct: 473 TLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFL 532
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDI 569
+ V W +LL+ +LH +T A A ++F+LE L+SN+Y G+++ D+
Sbjct: 533 PDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DV 589
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R T ++ RKNPGCS+IE+ D +H F++ D+SHPE + I AE+ L+ ++++ G
Sbjct: 590 RKTRNRRAARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAG 644
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 249/460 (54%), Gaps = 18/460 (3%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MY KC + AL VF+ + PN ++ +++ F N + L ++ M G+ PD
Sbjct: 1 MYGKCGSVADALAVFHAIE-HPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
F I C + + + +H ++ + L+ D+ +G+AL+ Y +C+ +E A K F+E
Sbjct: 60 MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDE 119
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM---SKEGIWMSRFTVTGVLSALIMMGFF 251
+ + +V WNA++ GY++ G+ AL++++ M S EG+ T + L A ++G
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR + V GY S V NALI+MY K + A ++F+ ++ +D+ +WN++++ +
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G L LF RM +P++VTF +L AC++L L GR IH + +G
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYES-- 297
Query: 372 SCKDIDDVFMNNALMDMYTKC-GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+ + N L++MYTKC S+ +A+ VF ++ +DV +WNI+I+ Y GQ K+AL
Sbjct: 298 ------DLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDAL 351
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES-RYGVVPTIEHYTCVID 489
D+F M + P+E+T VLSAC+ G QG+ L+ S R +E+ +++
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN--SLMN 409
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M R G L++ + A+ +++ V W TL+AA HG++
Sbjct: 410 MYNRCGSLDDTVGVFAAIRDKS-LVSWSTLIAAYAQHGHS 448
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 14/270 (5%)
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK V +AL +F +E + SW I+ + G++ L + RM+ G +PD
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F + CS L G+ +H I+ L + D+ + AL+ MY +C + A
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEF-------DIILGTALITMYARCRDLELA 113
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVGVLSAC 455
+ F +M KK + +WN +I GY +G + AL ++ M +KPD +TF L AC
Sbjct: 114 RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173
Query: 456 SHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
S G +SQGRE + S Y +++ +I+M + G L A ++ + N + +
Sbjct: 174 SVVGDISQGREIEARTVASGYASDSIVQN--ALINMYSKCGSLESARKVFDRLKNR-DVI 230
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
W T+++ G A QR+ +P
Sbjct: 231 AWNTMISGYAKQGAATQALELFQRMGPNDP 260
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 15/298 (5%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKC-CQMKYALFV 89
+ T I L C + +L++G+ IH + G +S L I + L+NMY+KC ++ A V
Sbjct: 264 VVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY-ESDLVIGNVLLNMYTKCSSSLEEARQV 322
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L +V T+N +I + A LD F M+ V P++ T ++ C + A
Sbjct: 323 FERLRTR-DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGA 381
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K +H L+ DV + ++L+N Y +C +++ + VF + + +V W+ ++
Sbjct: 382 KRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAA 441
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ G LE F + +EG+ T+ LSA G K G V + +G
Sbjct: 442 YAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEG--VQSFLSMVGDHGL 499
Query: 270 VPVMN---ALIDMYGKGKCVGEALE--IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
P ++D+ + + EA E I +M D +W S+++ C H+ T R
Sbjct: 500 APDYRHFLCMVDLLSRAGRL-EAAENLIHDMPFLPDAVAWTSLLS---GCKLHNDTKR 553
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 301/552 (54%), Gaps = 32/552 (5%)
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P+ + +I + S+ L FN +R G+ PD++ FP L++ + +
Sbjct: 39 PHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSL 98
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQ----------------------FMEEALKVFEE 194
H V +LG D+Y +AL+N Y K ++ K+F+
Sbjct: 99 HAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDR 158
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P+RDVV WN ++ G AQ G + +AL + + M KE + FT++ +L G
Sbjct: 159 MPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +HG ++ G+D V + ++LIDMY K V ++ F ++ +D SWNSI+ Q
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G D L F RML +P V+FS+V+PAC+HL AL G+Q+H YI+ G
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFD------ 332
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEALDM 432
D+ F+ ++L+DMY KCG+++ A+ +F K M +D+ SW +I+G M G +A+ +
Sbjct: 333 --DNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSL 390
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M +KP V F+ VL+ACSH+G + +G ++ M+ +GV P +EHY V D+LG
Sbjct: 391 FEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLG 450
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG+L EAY+ M E VW TLLAA R H N +LAE ++ ++PG+ G +V+
Sbjct: 451 RAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVI 510
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
MSNIY A ++ + +R MR+ ++K P CSWIE+ + +HTF++ D+SHP I
Sbjct: 511 MSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEA 570
Query: 613 LHSLTARLREHG 624
L+ L ++ + G
Sbjct: 571 LNILLEQMEKEG 582
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 144/284 (50%), Gaps = 8/284 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L + N+ KG+EIH Y +R G +SLI+MY+KC Q++ ++
Sbjct: 200 FTLSSI---LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCA 256
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ LS + ++N++I+G N +GL FF M + V P + +F +I C + A
Sbjct: 257 FHLLS-NRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTA 315
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMV 207
+ K++H + +LG D + +I S+L++ Y KC ++ A +F ++ + RD+V W A++
Sbjct: 316 LNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAII 375
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
G A G A+ +F M +G+ VL+A G G + + + G
Sbjct: 376 MGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGV 435
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMT 309
G+ A+ D+ G+ + EA + M E+ S W++++
Sbjct: 436 APGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLA 479
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 220/697 (31%), Positives = 342/697 (49%), Gaps = 120/697 (17%)
Query: 39 LQLCAHQTNLQK--GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
LQ+C Q+ + + +H++M+ +G + LI++YSK ++ YA ++F+ + +
Sbjct: 18 LQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP-Q 76
Query: 97 PNVFT---------------------------------YNAMISGFYSNDFAFKGLDFFN 123
P++ YNAMI+ + N ++ F
Sbjct: 77 PDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFC 136
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
M++ PD YTF ++ V + +++H V K G + +AL+++Y+KC
Sbjct: 137 DMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKC 196
Query: 183 Q---------FMEEALKVFEELPLRDV-------------------------------VL 202
M EA K+F+E+P RD V
Sbjct: 197 AASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVA 256
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNAM++GYA G + +A E+FR+M I + FT T V+S G F+ G+ +H +
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316
Query: 263 KM----GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH------- 311
K D +PV NALI Y K V A EIF M E+D+ SWN I++ +
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMD 376
Query: 312 ------------------------EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
Q G + L+ F+RM GF+P F+ + +CS
Sbjct: 377 EAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCS 436
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L +L HGRQ+H +V G + S NAL+ MY +CG + A +F M
Sbjct: 437 VLGSLKHGRQLHAQVVRYGYESSLSA--------GNALITMYARCGVVDAAHCLFINMPC 488
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
D SWN MI G GQG +A+++F M + + PD ++F+ V+SACSH+G + +GR++
Sbjct: 489 VDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKY 548
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + YGV P EHY +ID+L RAG+ +EA E+ +MP E +W LLA R+HG
Sbjct: 549 FDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N DL AA+R+F+L+P H G YVL+SN+Y G++ ++ +R MR + V+K PGCSWI
Sbjct: 609 NIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+++ +H+F+ D +HPE + IY L L +R+ G
Sbjct: 669 EVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIG 705
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 149/345 (43%), Gaps = 45/345 (13%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI----TSLINMYSKCCQMKY 85
FT + I+ +CA+ + G+E+H+Y L+T +P +LI Y KC ++
Sbjct: 290 FTFTSVIS---VCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDI 346
Query: 86 ALFVFN------------------NLSC------------EPNVFTYNAMISGFYSNDFA 115
A +FN N+ C E N+ ++ MISG FA
Sbjct: 347 AQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFA 406
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L FFN M+ G P Y F I C + ++ +++H V + G + + G+AL
Sbjct: 407 EEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNAL 466
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ Y +C ++ A +F +P D + WNAM+ Q G+ +A+E+F M KEGI R
Sbjct: 467 ITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDR 526
Query: 236 FTVTGVLSALIMMGFFKNGR----VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ V+SA G K GR +H + G + +ID+ + EA E
Sbjct: 527 ISFLTVISACSHAGLVKEGRKYFDSMHNV---YGVNPDEEHYARIIDLLCRAGKFSEAKE 583
Query: 292 IFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+ E M E W +++ GN D + +R+ Q D
Sbjct: 584 VMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHD 628
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 337/594 (56%), Gaps = 15/594 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKC-CQMKYALFVFNNLS 94
A+ + C+ + G I ++++TG + S + + LI+M+ K + A VF +
Sbjct: 173 AATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMP 232
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
E N T+ MI+ +A + +D F M G PD++T +I C ++ +L +
Sbjct: 233 -ERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQ 291
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVLWNAMVNGYA 211
++H + GL LD +G L+N Y KC M A K+F+++ +V W AM+ GY
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 212 QIGEF-HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G + +AL++FR M + + FT + L A + + G V VK+G+ S
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY + + +A + F+++ EK++ S+N+++ + + N + L LF+ +
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQ 471
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G TF+++L + + + G QIH ++ +GL N S + NAL+ MY+
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS--------VCNALISMYS 523
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG++ A VF M ++V SW +I G+ G +AL++F M E ++P+EVT++
Sbjct: 524 RCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIA 583
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G +++G + M + +GV+P +EHY C++D+LGR+G L+EA + +MP +
Sbjct: 584 VLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYK 643
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +VWRT L A R+HGN +L + AA+ + + EP Y+L+SN+Y + K++EV +IR
Sbjct: 644 ADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIR 703
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+++ + K GCSW+E+++ +H F D SHP+A IY EL +L+ ++++ G
Sbjct: 704 KAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLG 757
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 17/507 (3%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+HP L T L+ C + G +H + ++ + +++ SLI++YSKC Q + A
Sbjct: 62 SHP-DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F + ++ +++AM+S F +N+ F+ L F M + G P++Y F + C
Sbjct: 121 TSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST 180
Query: 147 VMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWN 204
V I G V K G L DV +G L++ ++K + + A KVFE++P R+ V W
Sbjct: 181 AEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+ Q G +A+++F M G RFT++GV+SA M G+ +H ++
Sbjct: 241 LMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 265 GYDSGVPVMNALIDMYGKGKCVGE---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHD-GT 320
G V LI+MY K G A +IF+ + + ++FSW +++T + Q G +D
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M+ P+ TFS+ L AC++LAAL G Q+ + V G + + +C
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS-SVNC------- 412
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ N+L+ MY + G + DA+ F + +K++ S+N +I Y + +EAL++F+ + +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ TF +LS + G + +G + + + G+ +I M R G + A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARV-IKSGLKLNQSVCNALISMYSRCGNIESA 531
Query: 501 YELALAMPNEANPVVWRTLLAASRLHG 527
+++ M + N + W +++ HG
Sbjct: 532 FQVFEDMEDR-NVISWTSIITGFAKHG 557
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 204/430 (47%), Gaps = 31/430 (7%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K + HM G PD T+ +K C + +H + + L LD ++L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 177 NTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ Y KC E+A +F + RD++ W+AMV+ +A +AL F M + G + +
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKC-VGEALEIF 293
+ A F G + G V+K GY S V V LIDM+ KG+ + A ++F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
E M E++ +W ++T Q G + LF M+ +G++PD T S V+ AC+++ L+
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLL 288
Query: 354 HGRQIHGYIVVNGLAKN---GSCKDIDDVFMNNALMDMYTKC---GSMRDAQMVFTKMSK 407
G+Q+H + +GL + G C L++MY KC GSM A+ +F ++
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCC-----------LINMYAKCSVDGSMCAARKIFDQILD 337
Query: 408 KDVASWNIMILGYGMD-GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+V SW MI GY G +EALD+F M + P+ TF L AC++ L G +
Sbjct: 338 HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQ 397
Query: 467 FLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ V CV I M R+G++++A + A + E N + + T++ A
Sbjct: 398 VFT-----HAVKLGFSSVNCVANSLISMYARSGRIDDARK-AFDILFEKNLISYNTVIDA 451
Query: 523 SRLHGNTDLA 532
+ N++ A
Sbjct: 452 YAKNLNSEEA 461
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 126/282 (44%), Gaps = 10/282 (3%)
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G HKA+ M +G T + L I F G +VH + + +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 274 NALIDMYGKGKCVGEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LI +Y K +A IF +M +D+ SW+++++ L F M+ G+
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ F+ ACS + G I G+++ G ++ DV + L+DM+ K
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS-------DVCVGCGLIDMFVKG 217
Query: 393 -GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A VF KM +++ +W +MI G EA+D+F M + +PD T GV
Sbjct: 218 RGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGV 277
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+SAC++ L G++ L R+G+ C+I+M +
Sbjct: 278 ISACANMELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAK 318
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 342/601 (56%), Gaps = 18/601 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PFT A+ ++++ A Q L GQ +H+ ++ G S SL+NMY+KC ++
Sbjct: 198 WPNPFTFASVLSAV---ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VFN + ++ ++N +++G N+ + L F+ R + T+ +IK C
Sbjct: 255 AKSVFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWN 204
++ + +++H V K G L + +AL + Y KC + +AL +F R+VV W
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A+++G Q G+ A+ +F RM ++ + + FT + +L A + + + +H V+K
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IHAQVIKT 429
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y V AL+ Y K +AL IF+M+E+KD+ +W+++++ H Q G+ +G LF
Sbjct: 430 NYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489
Query: 325 DRMLSAGFQPDLVTFSTVLPACS-HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
++M G +P+ T S+V+ AC+ A + GRQ H + + D + +++
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISI--------KYRYHDAICVSS 541
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY++ G++ AQ+VF + + +D+ SWN MI GY G +A++ F M + ++
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D VTF+ V+ C+H+G + +G+++ M + + PT+EHY C++D+ RAG+L+E L
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A +VWRTLL A R+H N +L + +A ++ LEP YVL+SNIY A GK+
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+E ++R M + V+K GCSWI++K+ +H+FI+ D+SHP + IY +L + RL++
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQD 781
Query: 624 G 624
G
Sbjct: 782 G 782
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 21/427 (4%)
Query: 113 DFAFKG-----LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
D+A +G LD F+ R+ GVL D T C++K C V + +++H L K G D
Sbjct: 73 DYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDR 132
Query: 168 -DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+V G++LV+ Y+KC + E ++VFE +P ++VV W +++ G A + + +F RM
Sbjct: 133 GEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRM 192
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
EGIW + FT VLSA+ G G+ VH VK G S V V N+L++MY K V
Sbjct: 193 RAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLV 252
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A +F ME +D+ SWN++M + L+LF + + T++TV+ C
Sbjct: 253 EDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLC 312
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
++L L RQ+H ++ +G G+ + AL D Y+KCG + DA +F+ +
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHLTGN--------VMTALADAYSKCGELADALNIFSMTT 364
Query: 407 -KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V SW +I G +G A+ +FS M E ++ P+E T+ +L A S + +
Sbjct: 365 GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA---SLSILPPQ 421
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++++ Y +P++ T ++ + G +A + M + + V W +L+
Sbjct: 422 IHAQVIKTNYQHIPSVG--TALLASYSKFGSTEDALSI-FKMIEQKDVVAWSAMLSCHAQ 478
Query: 526 HGNTDLA 532
G+ + A
Sbjct: 479 AGDCEGA 485
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 233/499 (46%), Gaps = 20/499 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFN 91
AT L+ C + G+++H ++ G +S TSL++MY KC + + VF
Sbjct: 100 ATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFE 159
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + NV T+ ++++G + + F MR G+ P+ +TF ++ A+
Sbjct: 160 GMP-KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD 218
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+++H K G V++ ++L+N Y KC +E+A VF + RD+V WN ++ G
Sbjct: 219 LGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL- 277
Query: 212 QIGEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q+ E +AL++F M++ T V+ + R +H V+K G+
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
VM AL D Y K + +AL IF M +++ SW +I++ Q G+ + LF RM
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ T+S +L A + QIH ++ S + AL+ Y
Sbjct: 398 DRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPS--------VGTALLASY 445
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K GS DA +F + +KDV +W+ M+ + G + A +F+ M +KP+E T
Sbjct: 446 SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505
Query: 450 GVLSACS-HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V+ AC+ S + QGR+F + +Y I + ++ M R G ++ A ++
Sbjct: 506 SVIDACACPSAGVDQGRQFHAI-SIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQ 563
Query: 509 NEANPVVWRTLLAASRLHG 527
+ + V W ++++ HG
Sbjct: 564 TDRDLVSWNSMISGYAQHG 582
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 337/594 (56%), Gaps = 15/594 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKC-CQMKYALFVFNNLS 94
A+ + C+ + G I ++++TG + S + + LI+M+ K + A VF +
Sbjct: 173 AATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMP 232
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
E N T+ MI+ +A + +D F M G PD++T +I C ++ +L +
Sbjct: 233 -ERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQ 291
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVLWNAMVNGYA 211
++H + GL LD +G L+N Y KC M A K+F+++ +V W AM+ GY
Sbjct: 292 QLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYV 351
Query: 212 QIGEF-HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G + +AL++FR M + + FT + L A + + G V VK+G+ S
Sbjct: 352 QKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVN 411
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V N+LI MY + + +A + F+++ EK++ S+N+++ + + N + L LF+ +
Sbjct: 412 CVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQ 471
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G TF+++L + + + G QIH ++ +GL N S + NAL+ MY+
Sbjct: 472 GMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQS--------VCNALISMYS 523
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG++ A VF M ++V SW +I G+ G +AL++F M E ++P+ VT++
Sbjct: 524 RCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIA 583
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G +++G + M + +GV+P +EHY C++D+LGR+G L+EA + +MP +
Sbjct: 584 VLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYK 643
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ +VWRT L A R+HGN +L + AA+ + + EP Y+L+SN+Y + K++EV +IR
Sbjct: 644 ADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIR 703
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+++N+ K GCSW+E+++ +H F D SHP+A IY EL +L+ ++++ G
Sbjct: 704 KAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLG 757
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 17/507 (3%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+HP L T L+ C + G +H + ++ + +++ SLI++YSKC Q + A
Sbjct: 62 SHP-DLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKA 120
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F + ++ +++AM+S F +N+ F+ L F M + G P++Y F + C
Sbjct: 121 TSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACST 180
Query: 147 VMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWN 204
V I G V K G L DV +G L++ ++K + + A KVFE++P R+ V W
Sbjct: 181 AEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWT 240
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+ Q G +A+++F M G RFT++GV+SA M G+ +H ++
Sbjct: 241 LMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH 300
Query: 265 GYDSGVPVMNALIDMYGKGKCVGE---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHD-GT 320
G V LI+MY K G A +IF+ + + ++FSW +++T + Q G +D
Sbjct: 301 GLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEA 360
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M+ P+ TFS+ L AC++LAAL G Q+ + V G + + +C
Sbjct: 361 LDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFS-SVNC------- 412
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ N+L+ MY + G + DA+ F + +K++ S+N +I Y + +EAL++F+ + +
Sbjct: 413 VANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQG 472
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ TF +LS + G + +G + + + G+ +I M R G + A
Sbjct: 473 MGASAFTFASLLSGAASIGTIGKGEQIHARV-IKSGLKLNQSVCNALISMYSRCGNIESA 531
Query: 501 YELALAMPNEANPVVWRTLLAASRLHG 527
+++ M + N + W +++ HG
Sbjct: 532 FQVFEDMEDR-NVISWTSIITGFAKHG 557
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 209/427 (48%), Gaps = 25/427 (5%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
K + HM G PD T+ +K C + +H + + L LD ++L+
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 177 NTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ Y KC E+A +F+ + RD++ W+AMV+ +A +AL F M + G + +
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKC-VGEALEIF 293
+ A F G + G VVK GY S V V LIDM+ KG+ + A ++F
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVF 228
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
E M E++ +W ++T Q G + LF M+ +G++PD T S V+ AC+++ L+
Sbjct: 229 EKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLL 288
Query: 354 HGRQIHGYIVVNGLAKN---GSCKDIDDVFMNNALMDMYTKC---GSMRDAQMVFTKMSK 407
G+Q+H + +GL + G C L++MY KC GSM A+ +F ++
Sbjct: 289 LGQQLHSQAIRHGLTLDRCVGCC-----------LINMYAKCSVDGSMCAARKIFDQILD 337
Query: 408 KDVASWNIMILGYGMD-GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+V SW MI GY G +EALD+F M + P+ TF L AC++ L G +
Sbjct: 338 HNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQ 397
Query: 467 -FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
F ++ + V + + +I M R+G++++A + A + E N + + T++ A
Sbjct: 398 VFTHAVKLGFSSVNCVAN--SLISMYARSGRIDDARK-AFDILFEKNLISYNTVIDAYAK 454
Query: 526 HGNTDLA 532
+ N++ A
Sbjct: 455 NLNSEEA 461
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G HKA+ M +G T + L I F G +VH + + +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 274 NALIDMYGKGKCVGEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LI +Y K +A IF++M +D+ SW+++++ L F M+ G+
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ F+ ACS + G I G++V G ++ DV + L+DM+ K
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS-------DVCVGCGLIDMFVKG 217
Query: 393 -GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A VF KM +++ +W +MI G EA+D+F M + +PD T GV
Sbjct: 218 RGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGV 277
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+SAC++ L G++ L R+G+ C+I+M +
Sbjct: 278 ISACANMELLLLGQQ-LHSQAIRHGLTLDRCVGCCLINMYAK 318
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 321/543 (59%), Gaps = 13/543 (2%)
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + E N+ T+ MI+ F A +D F M G +PD++T+ ++ C
Sbjct: 4 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 62
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVL 202
++ + K++H V +LGL LDV +G +LV+ Y KC ++++ KVFE++P +V+
Sbjct: 63 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 122
Query: 203 WNAMVNGYAQIGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W A++ YAQ GE K A+E+F +M I + F+ + VL A + G V+
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
VK+G S V N+LI MY + + +A + F+++ EK++ S+N+I+ + + +
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF+ + G TF+++L + + A+ G QIHG ++ G K+ C +
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQC-------I 294
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NAL+ MY++CG++ A VF +M ++V SW MI G+ G AL+MF M E
Sbjct: 295 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 354
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KP+E+T+V VLSACSH G +S+G++ M +G+VP +EHY C++D+LGR+G L EA
Sbjct: 355 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 414
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
E +MP A+ +VWRTLL A R+HGNT+L AA+ + + EP Y+L+SN++ + G
Sbjct: 415 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 474
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++++V+ IR +M+++N+ K GCSWIE+++ +H F + SHP+A IY EL L ++++
Sbjct: 475 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 534
Query: 622 EHG 624
E G
Sbjct: 535 EMG 537
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 19/304 (6%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
SG+ NH F+ ++ L+ C + ++ G++++SY ++ GI SLI+MY++
Sbjct: 149 SGHIRPNH-FSFSSV---LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 204
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
+M+ A F+ L E N+ +YNA++ G+ N + + FN + G+ +TF L
Sbjct: 205 GRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASL 263
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ + A+ + ++IHG + K G + I +AL++ Y +C +E A +VF E+ R+V
Sbjct: 264 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 323
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR----- 255
+ W +M+ G+A+ G +ALE+F +M + G + T VLSA +G G+
Sbjct: 324 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 383
Query: 256 --VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHE 312
HGIV +M + + ++D+ G+ + EA+E M D W +++
Sbjct: 384 MYKEHGIVPRMEHYA------CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 437
Query: 313 QCGN 316
GN
Sbjct: 438 VHGN 441
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ ++ A + KG++IH +L+ G + +LI+MYS+C ++ A V
Sbjct: 258 FTFASLLSG---AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN + + NV ++ +MI+GF + FA + L+ F+ M + G P++ T+ ++ C V
Sbjct: 315 FNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 373
Query: 150 VLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAM- 206
+ E +K ++K G+ + + +V+ + + EA++ +PL D ++W +
Sbjct: 374 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433
Query: 207 ----VNGYAQIG 214
V+G ++G
Sbjct: 434 GACRVHGNTELG 445
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 327/571 (57%), Gaps = 12/571 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVF 90
L T ++ L +CA + + +H Y L+ G++ + + +L+++Y KC K + VF
Sbjct: 240 LVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVF 299
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + E NV ++NA+I+ F LD F M G+ P+ T ++ ++
Sbjct: 300 DEID-ERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLF 358
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++HG K+ ++ DV+I ++L++ Y K A +F ++ +R++V WNAM+ +
Sbjct: 359 KLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANF 418
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+ ++A+E+ R+M +G + T T VL A +GF G+ +H ++++G +
Sbjct: 419 ARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDL 478
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL DMY K C+ A +F + +D S+N ++ + + + +LRLF M
Sbjct: 479 FVSNALTDMYSKCGCLNLAQNVFNI-SVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLL 537
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +PD+V+F V+ AC++LA + G++IHG +V + +F+ N+L+D+YT
Sbjct: 538 GMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTH--------LFVANSLLDLYT 589
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG + A VF + KDVASWN MILGYGM G+ A+++F M E ++ D V+FV
Sbjct: 590 RCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVA 649
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G + +GR++ +M + PT HY C++D+LGRAG + EA +L +
Sbjct: 650 VLSACSHGGLIEKGRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSII 708
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ +W LL A R+HGN +L AA+ +F+L+P HCG Y+L+SN+Y +++E +R
Sbjct: 709 PDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVR 768
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
M+ + +KNPGCSW+++ D +H F+ ++
Sbjct: 769 ELMKSRGAKKNPGCSWVQVGDLVHAFLVGEK 799
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 261/504 (51%), Gaps = 28/504 (5%)
Query: 6 SRINPFSSCFNFST--SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI 63
S P + +FS+ S+ QT N P LQLC L + +++H+Y L G
Sbjct: 13 SITTPLTKNTHFSSFFSTSLQTSNPP-------NLLQLCTLCDTLSQTKQVHAYSLLHGF 65
Query: 64 IDSPLSI-TSLINMYSKCCQMKYALFVF-NNLSCEPNVFTYNAMISGFYSNDFA--FKGL 119
+ +S+ SLI Y+ +L +F ++++ + F +N +I +N A F G
Sbjct: 66 LPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIR---ANSIAGVFDGF 122
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
+N M + GV PD+ T+P ++K C D + V + +++HG+ FKLG D DV++G+ L+ Y
Sbjct: 123 GTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFY 182
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM--SKEGIWMSRFT 237
C +A+KVF+E+P RD V WN ++ + G + +AL FR M +K GI T
Sbjct: 183 GNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVT 242
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNALIDMYGKGKCVGEALEIFEMM 296
V VL R+VH +K+G G V V NAL+D+YGK + ++F+ +
Sbjct: 243 VVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEI 302
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+E+++ SWN+I+T G + L +F M+ G +P+ VT S++LP L G
Sbjct: 303 DERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGM 362
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++HG+ + + DVF++N+L+DMY K GS R A +F KM +++ SWN M
Sbjct: 363 EVHGFSLKMAIES--------DVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAM 414
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I + + EA+++ M P+ VTF VL AC+ GFL+ G+E + R G
Sbjct: 415 IANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARI-IRVG 473
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEA 500
+ + DM + G LN A
Sbjct: 474 SSLDLFVSNALTDMYSKCGCLNLA 497
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L C+ L +Q+H Y +++G V + +L+ Y G ++ ++
Sbjct: 40 LLQLCTLCDTLSQTKQVHAYSLLHGFLPR-------SVSLCASLILQYASFGHPSNSLLL 92
Query: 402 F--TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
F + + WN +I + G + ++ M A +KPDE T+ VL CS
Sbjct: 93 FQHSVAYSRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFV 151
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +GRE + + + G + ++ G G +A ++ MP E + V W T+
Sbjct: 152 EVRKGRE-VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMP-ERDKVSWNTV 209
Query: 520 LAASRLHG 527
+ LHG
Sbjct: 210 IGLCSLHG 217
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 321/543 (59%), Gaps = 13/543 (2%)
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + E N+ T+ MI+ F A +D F M G +PD++T+ ++ C
Sbjct: 9 AYKVFDKMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 67
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF---MEEALKVFEELPLRDVVL 202
++ + K++H V +LGL LDV +G +LV+ Y KC ++++ KVFE++P +V+
Sbjct: 68 ELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMS 127
Query: 203 WNAMVNGYAQIGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W A++ YAQ GE K A+E+F +M I + F+ + VL A + G V+
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
VK+G S V N+LI MY + + +A + F+++ EK++ S+N+I+ + + +
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF+ + G TF+++L + + A+ G QIHG ++ G K+ C +
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQC-------I 299
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NAL+ MY++CG++ A VF +M ++V SW MI G+ G AL+MF M E
Sbjct: 300 CNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGT 359
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KP+E+T+V VLSACSH G +S+G++ M +G+VP +EHY C++D+LGR+G L EA
Sbjct: 360 KPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAM 419
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
E +MP A+ +VWRTLL A R+HGNT+L AA+ + + EP Y+L+SN++ + G
Sbjct: 420 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAG 479
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++++V+ IR +M+++N+ K GCSWIE+++ +H F + SHP+A IY EL L ++++
Sbjct: 480 QWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIK 539
Query: 622 EHG 624
E G
Sbjct: 540 EMG 542
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 155/304 (50%), Gaps = 19/304 (6%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
SG+ NH F+ ++ L+ C + ++ G++++SY ++ GI SLI+MY++
Sbjct: 154 SGHIRPNH-FSFSSV---LKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARS 209
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
+M+ A F+ L E N+ +YNA++ G+ N + + FN + G+ +TF L
Sbjct: 210 GRMEDARKAFDIL-FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASL 268
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ + A+ + ++IHG + K G + I +AL++ Y +C +E A +VF E+ R+V
Sbjct: 269 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 328
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR----- 255
+ W +M+ G+A+ G +ALE+F +M + G + T VLSA +G G+
Sbjct: 329 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 388
Query: 256 --VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHE 312
HGIV +M + + ++D+ G+ + EA+E M D W +++
Sbjct: 389 MYKEHGIVPRMEHYA------CMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 442
Query: 313 QCGN 316
GN
Sbjct: 443 VHGN 446
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ ++ A + KG++IH +L+ G + +LI+MYS+C ++ A V
Sbjct: 263 FTFASLLSG---AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN + + NV ++ +MI+GF + FA + L+ F+ M + G P++ T+ ++ C V
Sbjct: 320 FNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGM 378
Query: 150 VLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAM- 206
+ E +K ++K G+ + + +V+ + + EA++ +PL D ++W +
Sbjct: 379 ISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438
Query: 207 ----VNGYAQIG 214
V+G ++G
Sbjct: 439 GACRVHGNTELG 450
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 205/583 (35%), Positives = 334/583 (57%), Gaps = 18/583 (3%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KG E+H++++R+G++++ ++I LINMY+KC + A VF + + +V T+N+MI+
Sbjct: 405 RKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSV-TWNSMIT 463
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N + + F MR+ + P +T + C + + +++H KLGLDL
Sbjct: 464 GLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDL 523
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEVFRRM 226
DV + +AL+ Y +C +++E K F + D V WN+++ A +A+E F M
Sbjct: 524 DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVM 583
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +R T +L+A+ + + G+ +H +V+K + + NAL+ YGK +
Sbjct: 584 MRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDM 643
Query: 287 GEALEIFEMMEEK-DIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
G IF M ++ D SWNS+++ +H + + F M+ G + D TF+TVL
Sbjct: 644 GYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWF--MMQKGQRLDGFTFATVL 701
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ +A L G ++HG V L D+ + +AL+DMY KCG + A F
Sbjct: 702 SACATVATLERGMEVHGCSVRACLE--------SDIVIGSALVDMYAKCGRIDYASRFFE 753
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
M +++ SWN MI GY G G ++LD+F+ M PD VTFVGVLSACSH+G +++
Sbjct: 754 MMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNE 813
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA- 522
G M YG+ P +EH++C++D+LGR G+LN+ + MP + N ++WRT+L A
Sbjct: 814 GFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGAC 873
Query: 523 SRLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
R +G NT L AA+ + ++EP + NY+L+SN+Y +GGK+++V R MR+ V+K
Sbjct: 874 CRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKE 933
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
GCSW+ +KDG+H F++ D+SHPE IY +L L ++R G
Sbjct: 934 AGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAG 976
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 251/527 (47%), Gaps = 27/527 (5%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
P +C F + + + + I + Q C + L+ G +IH M +T ++ +
Sbjct: 155 PNEACELFRKMVSDGFMPNHYAFGSVIRACQECG-EYGLKFGMQIHGLMSKTQYVNDVTA 213
Query: 70 ITSLINMYSKCCQM-KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
LI+MY M YA F+++ N+ + N+MIS + A D F+ M++
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSI-WPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272
Query: 129 ----GVLPDKYTFPCLIKCCCDVM--AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
G+ P++YTF LI C + ++ ++++ V K G D+Y+GSALV+ + K
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKA 332
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+ A +F+++ R+VV N ++ G + +A+E+F M K+ + ++ + +L
Sbjct: 333 GSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIIL 391
Query: 243 SALIMMGFFKNGRV----VHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+A +NG+ VH +++ G ++ + + N LI+MY K + +A +F +M+
Sbjct: 392 TAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD 451
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
KD +WNS++T +Q ++ F M P T + L +C+ L + G Q
Sbjct: 452 NKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H + GL D+ DV ++NAL+ +Y +CG +++ Q F+ M D SWN +I
Sbjct: 512 LHCEGLKLGL-------DL-DVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLI 563
Query: 418 LGYGMDGQGK--EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
G D + EA++ F M A P+ VTF+ +L+A S G++ L+ R
Sbjct: 564 -GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKR- 621
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
V ++ G+ G + + M + + V W ++++
Sbjct: 622 NVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG 668
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 242/517 (46%), Gaps = 31/517 (5%)
Query: 23 NQTFNHPFTLATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC 81
+Q ++P I SL Q + + +E+H + + G ++ +LIN+Y++
Sbjct: 63 SQLHHNPVQHDEKIESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVG 122
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
+ VF+ + N+ +++ +ISG+ N + + F M G +P+ Y F +I
Sbjct: 123 DLGSGRKVFDEMPLR-NLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVI 181
Query: 142 KCC--CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM-EEALKVFEELPLR 198
+ C C + +IHGL+ K DV + L++ Y M + A + F+ + R
Sbjct: 182 RACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPR 241
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKE----GIWMSRFTVTGVLSALIMMGFFKNG 254
++V N+M++ Y Q G+ A ++F M KE G+ + +T ++SA + +G
Sbjct: 242 NLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLA--NSG 299
Query: 255 RV----VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
V + V K G+ + V +AL+ + K +G A IF+ M +++ S N ++
Sbjct: 300 LVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIG 359
Query: 311 HEQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGR----QIHGYIVVN 365
+ + + LF M S P+ ++ +L A L +G+ ++H +++ +
Sbjct: 360 LVRQKRGEEAVELFMEMKDSVELNPN--SYMIILTAFPEFHVLENGKRKGSEVHAFLIRS 417
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GL + + N L++MY KCG++ DA +VF M KD +WN MI G + Q
Sbjct: 418 GLLN-------AQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQ 470
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
EA+ F M +L P T + LS+C+ G++S G E L + G+ +
Sbjct: 471 FLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG-EQLHCEGLKLGLDLDVSVSN 529
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++ + G G + E + A ++ + + V W +L+ A
Sbjct: 530 ALLALYGECGYVKEC-QKAFSLMLDYDHVSWNSLIGA 565
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT +++ CA L++G E+H +R + + ++L++MY+KC ++ YA
Sbjct: 695 FTFATVLSA---CATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRF 751
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
F + N++++N+MISG+ + K LD F M+ G LPD TF ++ C
Sbjct: 752 FEMMPAR-NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSAC 805
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 325/607 (53%), Gaps = 15/607 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ +++ C+ L+ G++ H Y R + I +LI++Y KC ++ A +
Sbjct: 216 FVLASAVSA---CSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N+ ++ MI+G+ N + + F + Q G PD + ++ C + A
Sbjct: 273 FDCME-NRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +++H K L+ D Y+ ++L++ Y KC+ + EA VFE L D + +NAM+ G
Sbjct: 332 IWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+++G+ A++VF +M + S T +L + + +HG++VK G
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLD 451
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ ++LID+Y K V +A +F +M +D+ WN+++ Q + ++LF+++
Sbjct: 452 LYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQV 511
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G P+ TF ++ S L ++ HG+Q H I+ G D ++NAL+DMY
Sbjct: 512 SGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADS--------DHHVSNALIDMY 563
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG +++ +++F KDV WN MI Y GQ +EAL +F M ++P+ VTFV
Sbjct: 564 AKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFV 623
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSAC+H+G + +G M+++Y + P EHY V+++ GR+G+L+ A E MP
Sbjct: 624 GVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPI 683
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E VWR+LL+A L GN ++ A + +P G VLMSNIY + G + + +
Sbjct: 684 EPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKL 743
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M V K PG SWIE+ +HTFI+ R HPEA IY+ L LT+ L+ G D
Sbjct: 744 RQGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDT 803
Query: 627 CAGTLFD 633
TL D
Sbjct: 804 SELTLLD 810
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 262/516 (50%), Gaps = 15/516 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F +SG + N F LA+ +L+ CA + GQ++H +R G+ + T+LIN+
Sbjct: 103 FQRASGGEAPNE-FLLAS---ALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINL 158
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y+K + A+ VF+ L + N T+ A+I+G+ L+ F M GV PD++
Sbjct: 159 YAKVGCIDAAMLVFDALPVK-NPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFV 217
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+ C + + ++ HG +++ ++ D + +AL++ Y KC + A K+F+ +
Sbjct: 218 LASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCME 277
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
R++V W M+ GY Q +A+ +F ++S+EG F +L++ + GR
Sbjct: 278 NRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQ 337
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH +K +S V N+LIDMY K + + EA +FE + E D S+N+++ + + G+
Sbjct: 338 VHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGD 397
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
G + +F +M +P +TF ++L S +A+ +QIHG IV +G +
Sbjct: 398 LAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSL------- 450
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D++ ++L+D+Y+K + DA+ VF M +D+ WN MI G + QG+EA+ +F+ +
Sbjct: 451 -DLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQL 509
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ L P+E TFV +++ S + G++F + + G +IDM + G
Sbjct: 510 QVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQI-IKAGADSDHHVSNALIDMYAKCGF 568
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ E L + + W ++++ HG + A
Sbjct: 569 IKEG-RLLFESTLGKDVICWNSMISTYAQHGQAEEA 603
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 246/468 (52%), Gaps = 13/468 (2%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H+ + TG + L+ YSK +++ A +F+ + N+ ++ + IS +
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMP-HKNLVSWGSAISMHAQHGC 92
Query: 115 AFKGLDFFNHMRQL--GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ F ++ G P+++ ++ C AV +++HG+ ++GLD +VY+G
Sbjct: 93 EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+N Y K ++ A+ VF+ LP+++ V W A++ GY+QIG+ ALE+F +M +G+
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
RF + +SA +GF + GR HG ++ ++ V+NALID+Y K + A ++
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ ME +++ SW +++ + Q + +F ++ G+QPD+ +++L +C LAA+
Sbjct: 273 FDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAI 332
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQ+H + + L D ++ N+L+DMY KC + +A+ VF +++ D S
Sbjct: 333 WQGRQVHAHAIKANLES--------DEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAIS 384
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
+N MI GY G A+D+FS M LKP +TFV +L S + ++ L+
Sbjct: 385 YNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLI- 443
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + + +ID+ + + +A + M N + V+W ++
Sbjct: 444 VKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR-DMVIWNAMI 490
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 12/268 (4%)
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
+ H V G + + N L+ Y K V +A +F+ M K++ SW S +++H Q G
Sbjct: 32 LAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHG 91
Query: 316 NHDGTLRLFD--RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
+ + LF + S G P+ ++ L AC+ A+ G+Q+HG V GL N
Sbjct: 92 CEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGN--- 148
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
V++ AL+++Y K G + A +VF + K+ +W +I GY GQG AL++F
Sbjct: 149 -----VYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELF 203
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M ++PD +SACS GFL GR+ R V +ID+ +
Sbjct: 204 GKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHG-YAYRIAVETDASVINALIDLYCK 262
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLA 521
+L+ A +L M N N V W T++A
Sbjct: 263 CSRLSLARKLFDCMENR-NLVSWTTMIA 289
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/552 (35%), Positives = 319/552 (57%), Gaps = 10/552 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +G+++H +++ G DS +T L++MY+KC +++ + VF+ + + N
Sbjct: 145 LKACSELRETDEGRKLHCQIVKVGSPDS-FVLTGLVDMYAKCREVEDSRRVFDEI-LDRN 202
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + +MI G+ ND +GL FN MR+ V ++YT L+ C + A+ + K +HG
Sbjct: 203 VVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHG 262
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K G DL+ ++ + L++ Y KC + +A VF+EL D+V W AM+ GYAQ G +
Sbjct: 263 YVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPRE 322
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++F + + + T + VLSA G GR VH + +K+G + NAL+D
Sbjct: 323 ALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSEDAT-FENALVD 381
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +G+A +FE + +KD+ +WNSI++ + Q G L LFD+M S PD +T
Sbjct: 382 MYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAIT 441
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ + A G +HGY + GL +GS V++ AL++ Y KCG A
Sbjct: 442 LVSVLSACASVGAYRVGSSLHGYAIKAGLL-SGS------VYVGTALLNFYAKCGDAESA 494
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+++F +M +K+ +W+ MI GYG+ G +L++F M + KL+P+EV F +LSACSHS
Sbjct: 495 RVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHS 554
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G + M Y VP+++HY C++D+L RAG+L EA + +P + + +
Sbjct: 555 GMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGA 614
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
L RLH DL E+A +R+ +L P YVLMSN+Y + G++ + + M+Q+ +
Sbjct: 615 FLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGL 674
Query: 579 RKNPGCSWIELK 590
K PG S ++++
Sbjct: 675 AKLPGWSLVDIE 686
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 253/495 (51%), Gaps = 16/495 (3%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C + L +C ++L+K IH+ ++ G+ + L T L+++Y ++ A +F+ +
Sbjct: 42 CFSLLGICKTVSSLRK---IHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIR 98
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+++++ MI ++ ND + + F+N +R+ D F ++K C ++ E
Sbjct: 99 -NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEG 157
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+K+H + K+G D ++ + LV+ Y KC+ +E++ +VF+E+ R+VV W +M+ GY Q
Sbjct: 158 RKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQN 216
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ L +F RM + + +++T+ +++A +G G+ VHG V+K G+D ++
Sbjct: 217 DCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLV 276
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
L+D+Y K + +A +F+ + D+ SW +++ + Q G L+LF
Sbjct: 277 TPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLL 336
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ VT S+VL AC+ +L GR +H + K GS +D NAL+DMY KC
Sbjct: 337 PNTVTTSSVLSACAQTGSLNMGRSVHCLGI-----KLGS----EDATFENALVDMYAKCH 387
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DA+ VF + KDV +WN +I GY +G EAL++F M + PD +T V VLS
Sbjct: 388 MIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLS 447
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+ G G + ++ T +++ + G A + M E N
Sbjct: 448 ACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEM-GEKNT 506
Query: 514 VVWRTLLAASRLHGN 528
+ W ++ + G+
Sbjct: 507 ITWSAMIGGYGIQGD 521
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 136/268 (50%), Gaps = 5/268 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T+ T + L CA +L G+ +H ++ G D+ +L++MY+KC + A +
Sbjct: 337 PNTVTTS-SVLSACAQTGSLNMGRSVHCLGIKLGSEDATFE-NALVDMYAKCHMIGDARY 394
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + +V +N++ISG+ N +A++ L+ F+ MR V PD T ++ C V
Sbjct: 395 VFETV-FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453
Query: 149 AVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A +HG K G L VY+G+AL+N Y KC E A +F+E+ ++ + W+AM+
Sbjct: 454 AYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMI 513
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GY G+ ++LE+F M KE + + T +LSA G G R + + +
Sbjct: 514 GGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNF 573
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFE 294
+ ++D+ + + EAL+ E
Sbjct: 574 VPSMKHYACMVDLLARAGRLEEALDFIE 601
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T ++ L CA + G +H Y ++ G++ + + T+L+N Y+KC + A +F+
Sbjct: 441 TLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDE 500
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E N T++AMI G+ + L+ F M + + P++ F ++ C + E
Sbjct: 501 MG-EKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGE 559
Query: 153 VKKIHGL---VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
+ V+ + Y + +V+ + +EEAL E++P++ DV L A ++
Sbjct: 560 GWRYFNTMCQVYNFVPSMKHY--ACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLH 617
Query: 209 GYAQIGEFHKALEVFRRM 226
G F RRM
Sbjct: 618 GCRLHSRFDLGEVAVRRM 635
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 332/618 (53%), Gaps = 10/618 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L C + ++ G+ H ++++ G+ TSLI+MY+KC ++ A+ V++ ++
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT-S 176
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ T N +IS + N F + F + +G P+ YT+ ++ C + A+ E K++
Sbjct: 177 LDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQL 236
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K+ + +G+AL+ Y KC MEEA VFE L R+++ W A +NG+ Q G+F
Sbjct: 237 HAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDF 296
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
KAL+ F M + GI + FT + VL++ + F +GR+ H V+K G SGV V A+
Sbjct: 297 KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAI 356
Query: 277 IDMYGKGKCVGEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
IDMY + EA + F+ M SWN+++ + + + F RM+ +
Sbjct: 357 IDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACN 416
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T+S + ACS +L QIH ++ + + N + + ++L++ YT+CGS+
Sbjct: 417 EFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESN--------LHVASSLIEAYTQCGSL 468
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A VFT++S DV SWN +I Y +G +A+ + M E KP TF+ VLSAC
Sbjct: 469 ENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSAC 528
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SHSG + +G+EF M Y + P H +C++D+LGRAGQL A + + + +
Sbjct: 529 SHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASI 588
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
WR LLAA R + N +AE A+++ LEP YV +SN+Y G++ + + R M Q
Sbjct: 589 WRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQ 648
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
+ + K PGCSWIE+ + ++ F S D++HPE +Y +L L ++++ G T
Sbjct: 649 KEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHP 708
Query: 636 STASGFEKHRLYLEEVIA 653
+ E+ LY E +A
Sbjct: 709 ESRQPKEQLILYHSEKLA 726
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 320/593 (53%), Gaps = 55/593 (9%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
M S I+R N + N ST Q+ + + A + + A L +G+ +H++++
Sbjct: 777 MQSLINRANVYRVYRNISTHRTFQSSSDTYAKA-----IDMYARDRALYRGRALHAHLVI 831
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G+ L++ Y++C Q+ A +F+ + N+ + + F + L
Sbjct: 832 IGLARLTYFAAKLMSFYTECGQLSNARKLFDKIP-NTNIRRWIVLTGACARRGFYEEALS 890
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F+ M++ G+ P+++ P ++K C + + +H ++ K + D YI SAL+ Y
Sbjct: 891 AFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYS 950
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
KC +E+A +VF+ + +D+V+ NAMV+GYAQ G H+AL++ ++M + G+
Sbjct: 951 KCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV--------- 1001
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME--- 297
V N LI + + E+F +M
Sbjct: 1002 --------------------------KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANG 1035
Query: 298 -EKDIFSWNSIMTVHEQ-CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
E D+ SW S+++ Q NH+G F ML GF P VT S++LPAC+++A L HG
Sbjct: 1036 VEPDVVSWTSVISGFVQNFHNHEG-FDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHG 1094
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
++IHGY +V G+ K DV++ +AL+DMY KCG + +A+++F M +++ +WN
Sbjct: 1095 KEIHGYAMVIGVEK--------DVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 1146
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I GY G EA+++F+ M E+ K D +TF VL+ACSH+G + G M+ +Y
Sbjct: 1147 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKY 1206
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ P +EHY C++D+LGRAG+L+EAY+L AMP E + VW LL A R HGN +LAE+A
Sbjct: 1207 RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVA 1266
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
A+ +F+LEP G+ +L+SN+Y G++ ++ M+Q+ K PGCSWIE
Sbjct: 1267 AEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 20/592 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C A+L CA L+ G+++HS +R G + LI MYS+C + A VF+ +
Sbjct: 43 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 102
Query: 94 SCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
P+V Y ++IS F N +F ++Q G+ P+++T ++ C V+
Sbjct: 103 D-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ-GLKPNEHTMTTILTACPRVLG--- 157
Query: 153 VKKIHG-LVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IHG L+ K+GL VY +AL++ Y + + A VF+ L ++VV W +M+ Y
Sbjct: 158 -QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 216
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ G +AL+VF M EG+ + F ++ VL A +G GR +H +K + +
Sbjct: 217 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDI 273
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL+ MYG+ V E + +E D+ SW + ++ + Q G + + L +M S
Sbjct: 274 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 333
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF P+ FS+VL +C+ +A+L G Q H LA C ++ NAL++MY+
Sbjct: 334 GFTPNGYAFSSVLSSCADVASLDQGMQFHC------LALKLGCDS--EICTGNALINMYS 385
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M A++ F M DV SWN +I G+ G +AL++FS M +KPD+ TF+G
Sbjct: 386 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 445
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL C+HSG + +G F LM +Y P HY C+IDMLGR G+ +EA + MP E
Sbjct: 446 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 505
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ ++W+TLLA+ +LH N D+ ++AA R+ +L +YVLMSNIY G++E+ +R
Sbjct: 506 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 565
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
M + V+K+ GCSWIE+ + +HTF S D SHP + SIY L L A +++
Sbjct: 566 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 617
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 213/437 (48%), Gaps = 19/437 (4%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV + +++SG+ N L F M + GV P+ + + C D+ A+ +++H
Sbjct: 5 NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 64
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L + G D +IGS L+ Y +C + A +VF+ + DVV + ++++ + + GEF
Sbjct: 65 SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG-IVVKMGYDS-GVPVMNA 275
A E +M K+G+ + T+T +L+A + G+ +HG ++ K+G S V A
Sbjct: 125 LAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTA 180
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LID Y + A +F+ + K++ SW S+M ++ + G + L++F M+S G P+
Sbjct: 181 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPN 240
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
S VL AC + GRQ+H + + L I D+ ++NAL+ MY + G +
Sbjct: 241 EFALSIVLGACGSIGL---GRQLHCSAIKHDL--------ITDIRVSNALLSMYGRTGLV 289
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ + + K+ D+ SW I +G G++A+ + M P+ F VLS+C
Sbjct: 290 EELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSC 349
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ L QG +F + + G I +I+M + GQ+ A LA + + +
Sbjct: 350 ADVASLDQGMQF-HCLALKLGCDSEICTGNALINMYSKCGQMGSA-RLAFDVMHTHDVTS 407
Query: 516 WRTLLAASRLHGNTDLA 532
W +L+ HG+ + A
Sbjct: 408 WNSLIHGHAQHGDANKA 424
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 165/333 (49%), Gaps = 15/333 (4%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P ++VV W ++++GY + G AL +F M + G+ + F L A +G + G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
VH + V+ G+ + + LI+MY + + A E+F+ M+ D+ + S+++ +
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + +ML G +P+ T +T+L AC + G+QIHGY++ ++ S
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQS-- 174
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
V+ + AL+D Y++ G + A+ VF + K+V SW M+ Y DG+ +EAL +F
Sbjct: 175 ----VYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 230
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + P+E VL AC G + GR+ L ++ ++ I ++ M GR
Sbjct: 231 DMISEGVDPNEFALSIVLGAC---GSIGLGRQ-LHCSAIKHDLITDIRVSNALLSMYGRT 286
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
G L E E L + V W T ++A+ +G
Sbjct: 287 G-LVEELEAMLNKIENPDLVSWTTAISANFQNG 318
>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
Length = 587
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 330/582 (56%), Gaps = 15/582 (2%)
Query: 48 LQKGQEIHSYMLR--TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
L G+ +H+ +R T D+ ++ +L++MY+KC M ++ +N S EP++ +M
Sbjct: 5 LAHGRALHALAIRSCTAYTDAFVA-AALVHMYAKCRGMVGSINAYNAFS-EPDMVLRTSM 62
Query: 106 ISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
++G+ N A + L+FF+ H+ G +P T +I + VL + H V +
Sbjct: 63 VTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNN 122
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ D+ + +A++ Y++ ++ A ++FE + +DVV W+ MV GY Q G+ +AL ++
Sbjct: 123 FEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYK 182
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+M + GI + TV V+ A + + GR VH I VK+G + + V AL+DMY K
Sbjct: 183 KMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCS 242
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
C EA+++F M +KD +W +++ Q G D ++R+F ML G PD VT VL
Sbjct: 243 CHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLA 302
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
ACS + +HGY+V+ G D +F+ AL+D+Y+KCG++ A VF
Sbjct: 303 ACSESGVMRQAFCLHGYLVITGFC--------DKIFVAAALVDLYSKCGNLGCAVRVFES 354
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+KDV W+ MI GYG+ G G++A+++F M + +KP+ +TFV VLSACSHSG + +G
Sbjct: 355 AMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEG 414
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ M YGVVP H++ ++D+LGRAG+L EA +L L A+ W LLAA R
Sbjct: 415 KRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKL-LHGNGRADAHTWCALLAACR 473
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
H +T+++E+ A ++ +L+P H G Y L++NIY + + R+ +R + + K PGC
Sbjct: 474 AHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGC 533
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
S +EL + +HTF + +R H + + I L + L+ GDC
Sbjct: 534 SAVELNNVMHTFTAGERPHKDWEKISRLLREFSRTLKG-GDC 574
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 201/386 (52%), Gaps = 13/386 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P TL + I++ A ++ GQ H++++R + + +++ Y + ++ A
Sbjct: 92 PVTLVSVISA---AAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARR 148
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F ++ E +V T++ M++G+ + + L + M + G+ P+ T +++ C
Sbjct: 149 LFEGMT-EKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAP 207
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E +++H + K+G +L++ + +ALV+ Y+KC EEA+++F + +D V W +++
Sbjct: 208 DIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVIS 267
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+ Q G +++ VF+ M G + T+ VL+A G + +HG +V G+
Sbjct: 268 GFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCD 327
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V AL+D+Y K +G A+ +FE EKD+ W+S+++ + G + LF M+
Sbjct: 328 KIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMV 387
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV-VNGLAKNGSCKDIDDVFMNNALMD 387
++ +P+ +TF +VL ACSH + G++I + V G+ N ++A++D
Sbjct: 388 ASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNA--------VHHSAMVD 439
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASW 413
+ + G +++A + + D +W
Sbjct: 440 LLGRAGELQEAAKLLHGNGRADAHTW 465
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 5/288 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ +Q C+ ++++G+ +H ++ G T+L++MY KC + A+ +F +
Sbjct: 195 TVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRM 254
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + + + +ISGF N + + F M G PD T ++ C + + +
Sbjct: 255 S-KKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQA 313
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+HG + G +++ +ALV+ Y KC + A++VFE +DVVLW++M++GY
Sbjct: 314 FCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVH 373
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G +A+E+F+ M + + T VLSA G + G R+ + G
Sbjct: 374 GLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVH 433
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+A++D+ G+ + EA ++ D +W +++ C H T
Sbjct: 434 HSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAA---CRAHHDT 478
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 3/184 (1%)
Query: 26 FNHPFTLA-TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F PF A T + L C+ +++ +H Y++ TG D +L+++YSKC +
Sbjct: 287 FGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLG 346
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A+ VF + + E +V +++MISG+ + + ++ F M V P+ TF ++ C
Sbjct: 347 CAVRVFES-AMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSAC 405
Query: 145 CDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
V E K+I + G+ + SA+V+ + ++EA K+ D W
Sbjct: 406 SHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTW 465
Query: 204 NAMV 207
A++
Sbjct: 466 CALL 469
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/618 (33%), Positives = 334/618 (54%), Gaps = 17/618 (2%)
Query: 9 NPFSSCFNFSTSSGNQTFNHP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
+P +S +F T T P FT A I++ + NL G +H++ + G +
Sbjct: 84 SPDASSISFYTHLLKNTTLSPDNFTYAFAISA----SPDDNL--GMCLHAHAVVDGFDSN 137
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
++L+++Y K ++ YA VF+ + V +N MI+G N + F M
Sbjct: 138 LFVASALVDLYCKFSRVAYARKVFDKMPDRDTVL-WNTMITGLVRNCCYDDSVQVFKDMV 196
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
GV D T ++ ++ V I L KLG D Y+ + L++ + KC+ ++
Sbjct: 197 AQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVD 256
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A +F + D+V +NA+++G++ GE A++ FR + G +S T+ G++
Sbjct: 257 TARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSS 316
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G + G VK G V AL +Y + + A ++F+ EK + +WN+
Sbjct: 317 PFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNA 376
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+++ + Q G + + LF M++ F P+ VT +++L AC+ L AL G+ +H I
Sbjct: 377 MISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKN 436
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L +N ++++ AL+DMY KCG++ +A +F S+K+ +WN MI GYG+ G G
Sbjct: 437 LEQN--------IYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYG 488
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
EAL +F+ M +P VTF+ VL ACSH+G + +G E M ++Y + P EHY C
Sbjct: 489 DEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYAC 548
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+LGRAGQL +A E MP E P VW TLL A +H +T+LA +A++R+F+L+PG+
Sbjct: 549 MVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGN 608
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
G YVL+SNIY + + +R ++++N+ K PGC+ IE+ H F+ DRSH +
Sbjct: 609 VGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQT 668
Query: 607 KSIYAELHSLTARLREHG 624
SIYA+L LT ++RE G
Sbjct: 669 TSIYAKLEELTGKMREMG 686
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 240/482 (49%), Gaps = 18/482 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF-YS 111
E H+ ++R G ++T L ++A +F ++ +P++F +N +I GF +S
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVP-KPDIFLFNVLIKGFSFS 84
Query: 112 NDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
D + + F+ H+ + L PD +T+ I D + +H G D +++
Sbjct: 85 PDAS--SISFYTHLLKNTTLSPDNFTYAFAISASPDDNLGM---CLHAHAVVDGFDSNLF 139
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ SALV+ Y K + A KVF+++P RD VLWN M+ G + + +++VF+ M +G
Sbjct: 140 VASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQG 199
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + TV VL A+ M K G + + +K+G+ V+ LI ++ K + V A
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTAR 259
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F M+ + D+ S+N++++ G + ++ F +L +G + T ++P S
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG 319
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L I G+ V +G S ++ AL +Y++ + A+ +F + S+K V
Sbjct: 320 HLHLACCIQGFCVKSGTILQPS--------VSTALTTIYSRLNEIDLARQLFDESSEKTV 371
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
A+WN MI GY G + A+ +F M + P+ VT +LSAC+ G LS G+ L
Sbjct: 372 AAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQL 431
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
++S+ + I T +IDM + G ++EA +L + +E N V W T++ LHG D
Sbjct: 432 IKSK-NLEQNIYVSTALIDMYAKCGNISEASQL-FDLTSEKNTVTWNTMIFGYGLHGYGD 489
Query: 531 LA 532
A
Sbjct: 490 EA 491
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 335/641 (52%), Gaps = 50/641 (7%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ---MKYALFVFNNL 93
+SL L + ++G +IH+ + G+ SI+ LI+ +S + ++ +F+ +
Sbjct: 11 SSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLE 152
C PN+F +N MI G+ +D + + + M G+ P+ +TFP L+ C + ++
Sbjct: 71 DC-PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H + K G + D+++ +AL++ Y + A +F+E +RD+V +N M+ GYA+
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGV 270
+ + AL +F M GI FT + S ++ G+ +H V K DS +
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249
Query: 271 PVMNALIDMYGK------------------------------GKC--VGEALEIFEMMEE 298
+ +A++DMY K +C + A ++F M E
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+D+ SW ++++ + Q G L LF M + G +PD VT VL AC+ L A G+++
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK--KDVASWNIM 416
+ + NG+ + + A+MDMY KCGS+ A +F ++ K K +N M
Sbjct: 370 YHQYIENGVFNQ-------NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 422
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I G G G+ A+ +F + LKPDEVTFVGVL AC HSG + +G++ M + YG
Sbjct: 423 IAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYG 482
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
+ P +EHY C++D+LGR G L EAY+L MP EAN V+WR LL+A R HGN + EIA
Sbjct: 483 IKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAG 542
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
Q++ ++E H YVL+SNI ++EE +R M +RK PG S+IEL +H F
Sbjct: 543 QKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRF 602
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG--DCCAGTLFDSD 635
++SD+SHP+ K I L + RL+ G A +FD D
Sbjct: 603 VASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDID 643
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 321/594 (54%), Gaps = 60/594 (10%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA + L+ G ++H + L+T + T+ ++MY KC + A +FN+
Sbjct: 276 STFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNS 335
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L N+ +YNA+I G+ +D KGL D+ + + C + LE
Sbjct: 336 LP-NHNLQSYNAIIVGYARSD---KGLGL-----------DEVSLSGAFRACAVIKGDLE 380
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++HGL K ++ + +A+++ Y KC + EA VFEE+ RD V WNA++ + Q
Sbjct: 381 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 440
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGV 270
G K L +F +H ++K +G DS V
Sbjct: 441 NGNEEKTLSLF---------------------------------IHNRIIKSRLGLDSFV 467
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ ALIDMY K + +A ++ + + E+ + SWN+I++ + + F +ML
Sbjct: 468 GI--ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 525
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G PD T++T+L C++L + G+QIH I+ L D ++++ L+DMY+
Sbjct: 526 GVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQS--------DAYISSTLVDMYS 577
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG+M+D Q++F K +D +WN M+ GY G G+EAL +F M +KP+ TF+
Sbjct: 578 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 637
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL AC H G + +G + M S YG+ P +EHY+CV+D++GR+GQ+++A EL MP E
Sbjct: 638 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 697
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A+ V+WRTLL+ ++HGN ++AE AA + QLEP YVL+SNIY G + EV +R
Sbjct: 698 ADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLR 757
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR ++K PGCSWIE+K +H F+ D++HP +K IY L LT ++ G
Sbjct: 758 KMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 811
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 264/611 (43%), Gaps = 119/611 (19%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
I+PFSS +T + +TF+H F Q C+ + L G++ H+ M+ T +
Sbjct: 29 ISPFSS--YQATPTKKKTFSHIF---------QECSDRKALCPGKQAHARMILTEFKPTV 77
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLS------------------------------CEP 97
LI MY KC +++A VF+ + E
Sbjct: 78 FVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER 137
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++N++ISG+ N K +D F M ++G + D+ TF ++K C + +IH
Sbjct: 138 DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIH 197
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL K+G D DV GSAL++ Y KC+ ++ +++ F +P ++ V W+A++ G Q +
Sbjct: 198 GLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLR 257
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F+ M K G+ +S+ T V + + + G +HG +K + + V + A +
Sbjct: 258 GGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATL 317
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A ++F + ++ S+N+I+ + + G D V
Sbjct: 318 DMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS--------------DKGLGLDEV 363
Query: 338 TFSTVLPACSHLAALMHGRQIHGY------------------------------------ 361
+ S AC+ + + G Q+HG
Sbjct: 364 SLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 423
Query: 362 ---------IVVNGLAKNGSCKDIDDVFMNN---------------ALMDMYTKCGSMRD 397
++ +NG+ + +F++N AL+DMY+KCG M
Sbjct: 424 VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEK 483
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ + +++++ V SWN +I G+ + Q +EA FS M E + PD T+ +L C++
Sbjct: 484 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN 543
Query: 458 SGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+ G++ +++ I + ++DM + G + + + PN + V W
Sbjct: 544 LVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTW 600
Query: 517 RTLLAASRLHG 527
++ HG
Sbjct: 601 NAMVCGYAQHG 611
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 193/433 (44%), Gaps = 65/433 (15%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K TF + + C D A+ K+ H + V++ + L+ Y+KC +E A KVF+
Sbjct: 42 KKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 194 ELPLRDVVLWNAM-------------------------------VNGYAQIGEFHKALEV 222
+P RD V WNAM ++GY G+ K ++V
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M + G R T VL + + G +HG+ VKMG+D V +AL+DMY K
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + +++ F M EK+ SW++I+ Q + G L LF M AG TF++V
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+C+ L+AL G Q+HG+ + DV + A +DMY KC ++ DAQ +F
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGT--------DVVIGTATLDMYMKCNNLSDAQKLF 333
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-----H 457
+ ++ S+N +I+GY +G L DEV+ G AC+
Sbjct: 334 NSLPNHNLQSYNAIIVGYARSDKG--------------LGLDEVSLSGAFRACAVIKGDL 379
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G G L +S V I +DM G+ G L EA + M + + V W
Sbjct: 380 EGLQVHGLSMKSLCQSNICVANAI------LDMYGKCGALVEACLVFEEMVSR-DAVSWN 432
Query: 518 TLLAASRLHGNTD 530
++AA +GN +
Sbjct: 433 AIIAAHEQNGNEE 445
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT L CA+ ++ G++IH+ +++ + ++L++MYSKC M+ +
Sbjct: 532 FTYATI---LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLI 588
Query: 90 FNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F PN T+NAM+ G+ + + L F +M+ V P+ TF +++ C
Sbjct: 589 FEK---APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGH- 644
Query: 148 MAVLE--VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
M ++E + H ++ GLD + S +V+ + + +AL++ E +P D V+W
Sbjct: 645 MGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWR 704
Query: 205 AMVNGYAQIGEFHKALEVFRRMS 227
+++ I + H +EV + +
Sbjct: 705 TLLS----ICKIHGNVEVAEKAA 723
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 207/661 (31%), Positives = 352/661 (53%), Gaps = 48/661 (7%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
++S+ HP + + L C +L +G+++H +++ G P+ + L+ Y
Sbjct: 165 ASSASQDLIVHPIS-----SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 219
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
S + A + N S + F +N +IS + N F K L + M + G+ PD +T+
Sbjct: 220 SAFNLLVDAHVITEN-SNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTY 278
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
P ++K C + + + K++H + + + + +AL++ Y KC + A +F+++P
Sbjct: 279 PSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPE 338
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF---TVTG-------------V 241
RD V WN+M++ YA +G +++A E+F M E I ++ T+ G +
Sbjct: 339 RDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALEL 398
Query: 242 LS------------ALIM-------MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
LS ALI+ +G K G+ +H ++ + V N+LI MY +
Sbjct: 399 LSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSR 458
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + A +F++ME K + SWNSI++ + L ML +G +P+ VT ++V
Sbjct: 459 CKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASV 518
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LP C+ +A L HG++ H Y+ K D + + NAL+DMY + G + +A+ VF
Sbjct: 519 LPLCARVANLQHGKEFHCYMTRREDFK-------DHLLLWNALVDMYARSGKVLEARRVF 571
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ ++D ++ MI GYGM G+G+ AL +F M ++KPD +T + VLSACSHSG ++
Sbjct: 572 DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT 631
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
QG+ M S YG+ P +EH+ C+ D+ GRAG LN+A E+ MP + P +W TL+ A
Sbjct: 632 QGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 691
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R+H NT++ E AA+++ +++P + G YVL++N+Y A G + ++ +R MR VRK P
Sbjct: 692 CRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAP 751
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFE 642
GC+W+++ G F+ D S+ A IY L LT ++E G + D T+ F
Sbjct: 752 GCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVIKEAGYISSEDFGSGDETSGEFN 811
Query: 643 K 643
+
Sbjct: 812 E 812
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 335/593 (56%), Gaps = 13/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I L +L GQ++H L+ G+ D L+++ SLINMY K + +A VF+N
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S E ++ ++N++I+G N + + F + + G+ PD+YT ++K + L
Sbjct: 376 MS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 153 V-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K++H K+ D ++ +AL++ Y + + M+EA +FE D+V WNAM+ GY
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYT 493
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q + HK L++F M K+G FT+ V + G+ VH +K GYD +
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + ++DMY K + A F+ + D +W ++++ + G + +F +M G
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T +T+ A S L AL GRQIH N L N + +D F+ +L+DMY K
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHA----NALKLNCT----NDPFVGTSLVDMYAK 665
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA +F ++ ++ +WN M++G G+GKE L +F M +KPD+VTF+GV
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSHSG +S+ + + M YG+ P IEHY+C+ D LGRAG + +A L +M EA
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ ++RTLLAA R+ G+T+ + A ++ +LEP YVL+SN+Y A K++E+ R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ V+K+PG SWIE+K+ +H F+ DRS+ + + IY ++ + +++ G
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 211/416 (50%), Gaps = 24/416 (5%)
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L F M + V D+ TF ++ V ++ +++H + KLGLDL + + ++L+N
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y K + A VF+ + RD++ WN+++ G AQ G +A+ +F ++ + G+ ++T+
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 239 TGVLSALIMM--GFFKNGRV-VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T VL A + G + +V VH I + DS V ALID Y + +C+ EA +FE
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS--TALIDAYSRNRCMKEAEILFE- 476
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
D+ +WN++M + Q +HDG TL+LF M G + D T +TV C L A+
Sbjct: 477 RHNFDLVAWNAMMAGYTQ--SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+Q+H Y + +G D+ D+++++ ++DMY KCG M AQ F + D +W
Sbjct: 535 QGKQVHAYAIKSGY-------DL-DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI G +G+ + A +FS M + PDE T + A S L QGR+ + +
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHAN 643
Query: 474 RYGVVPTIEHY--TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ T + + T ++DM + G +++AY L N W +L HG
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL-FKRIEMMNITAWNAMLVGLAQHG 698
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/563 (23%), Positives = 250/563 (44%), Gaps = 89/563 (15%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
++L G+ H+ +L I +LI+MYSKC + YA VF+ + + ++ ++N++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSI 111
Query: 106 ISGF-YSNDFAFKGLD----FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++ + S++ + + F +RQ V + T ++K C V + HG
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 161 FKLGLDLDVYIGSALVN-------------------------------TYLKCQFMEEAL 189
K+GLD D ++ ALVN YL+ F EEA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 190 KVFE----------ELPLR----------------------------DVVLWNAMVNGYA 211
+ E+ LR +++ N ++ Y
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G++ L+ F M + + + T +L+ + + G+ VH + +K+G D +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N+LI+MY K + G A +F+ M E+D+ SWNS++ Q G + LF ++L G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 332 FQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD T ++VL A S L L +Q+H + + ++ D F++ AL+D Y+
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI--------KINNVSDSFVSTALIDAYS 463
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+ M++A+++F + + D+ +WN M+ GY G + L +F+ M + + D+ T
Sbjct: 464 RNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 451 VLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
V C ++QG++ ++S Y + + + ++DM + G ++ A + A
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAA-QFAFDSIP 579
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
+ V W T+++ +G + A
Sbjct: 580 VPDDVAWTTMISGCIENGEEERA 602
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 192/581 (33%), Positives = 332/581 (57%), Gaps = 13/581 (2%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
H+T+L +I++ +L TG+ I L+N S ++ A +F+ +P+VF +N
Sbjct: 87 HKTHLN---QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP-DPDVFLWN 142
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
A++ + + F ++ + M+ V PD ++FPC++K C + A+ +++HG +F+
Sbjct: 143 AIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRH 202
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G + DV++ + LV Y KC + A VF L R +V W ++++GYAQ G+ +AL +F
Sbjct: 203 GFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIF 262
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M K + + VL A + ++G+ +HG V+KMG + ++ +L +Y K
Sbjct: 263 SEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC 322
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A F +E + WN++++ + + G + + LF M S +PD +T ++ +
Sbjct: 323 GHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSI 382
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ + +L R + YI ++ +DV +N +L+D Y KCGS+ A+ VF
Sbjct: 383 AACAQIGSLELARWMDEYISMSEFR--------NDVIVNTSLIDTYAKCGSVDMARFVFD 434
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
++ KDV W+ M++GYG+ GQG+E++ +F M +A + P++VTFVG+L+AC +SG + +
Sbjct: 435 RIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEE 494
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + M YG+ P +HY CV+D+LGRAG L+ AY + MP E VW LL+A
Sbjct: 495 GWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSAC 553
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
++H + L E AA+R+F L+P + G+YV +SN+Y + ++ V +R MR++ + K+ G
Sbjct: 554 KIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLG 613
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S IE+ L F + D++HP +K I+ E+ L RL+E G
Sbjct: 614 YSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAG 654
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 194/422 (45%), Gaps = 19/422 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ L+ G+ +H + R G L+ +Y+KC ++ A VF L +
Sbjct: 180 LKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL-VDRT 238
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ ++ISG+ N + L F+ MR+ V PD +++ DV + K IHG
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K+GL+ + + +L + Y KC + A F ++ ++ WNAM++GY + G +
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E+FR M + I TVT ++A +G + R + + + + V V +LID
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K V A +F+ + +KD+ W+++M + G ++ LF M AG P+ VT
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478
Query: 339 FSTVLPACSHLAALMHG--------------RQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
F +L AC + + G R H VV+ L + G + MN
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMP 538
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF--SCM--CEAK 440
+ + G++ A + ++ + A+ + L G + +++ SC+ C AK
Sbjct: 539 IEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAK 598
Query: 441 LK 442
++
Sbjct: 599 VR 600
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +S+ CA +L+ + + Y+ + + + TSLI+ Y+KC + A FVF+ +
Sbjct: 377 TVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRI 436
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++AM+ G+ + + + F+ MRQ GV P+ TF L+ C + V E
Sbjct: 437 P-DKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNG--- 209
+ + G++ + +V+ + ++ A +P+ V +W A+++
Sbjct: 496 WDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKI 555
Query: 210 --YAQIGEF 216
+ +GE+
Sbjct: 556 HRHVTLGEY 564
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 200/595 (33%), Positives = 339/595 (56%), Gaps = 12/595 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + + CA ++ G +H + GI + SL++MYSKC + A +F+
Sbjct: 299 VATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFD 358
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGL-DFFNHM-RQLGVLPDKYTFPCLIKCCCDVMA 149
++ NV ++N +I G YS + F+G+ + M R+ V ++ T ++ C
Sbjct: 359 -MNGGKNVVSWNTIIWG-YSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQ 416
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+L +K+IHG F+ G D + +A V Y KC ++ A +VF + + V WNA++
Sbjct: 417 LLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGA 476
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ G K+L++F M G+ RFT+ +L A + F + G+ +HG +++ G +
Sbjct: 477 HAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELD 536
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +L+ +Y + + IF+ ME K + WN ++T Q L F +MLS
Sbjct: 537 EFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLS 596
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P + + VL ACS ++AL G+++H + + L+ +D F+ AL+DMY
Sbjct: 597 GGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLS--------EDAFVTCALIDMY 648
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG M +Q +F ++++KD A WN++I GYG+ G G +A+++F M +PD TF+
Sbjct: 649 AKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFL 708
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC+H+G +++G ++L M++ YGV P +EHY CV+DMLGRAGQL EA +L MP+
Sbjct: 709 GVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPD 768
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + +W +LL++ R +G+ ++ E ++++ +LEP NYVL+SN+Y GK++EV +
Sbjct: 769 EPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKV 828
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M++ + K+ GCSWIE+ ++ F+ SD S E+K I L ++ + G
Sbjct: 829 RQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIG 883
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/443 (32%), Positives = 229/443 (51%), Gaps = 23/443 (5%)
Query: 39 LQLCAHQTNLQKGQEIH-----SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
L+ C H N+ G+++H S+ LR ++ S T +I MYS C + VF+
Sbjct: 99 LRACGHHKNIHVGRKVHALVSASHKLRNDVVLS----TRIIAMYSACGSPSDSRGVFDAA 154
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
E ++F YNA++SG+ N + F + + PD +T PC+ K C V V
Sbjct: 155 K-EKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVEL 213
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +H L K G D ++G+AL+ Y KC F+E A+KVFE + R++V WN+++ ++
Sbjct: 214 GEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSE 273
Query: 213 IGEFHKALEVFRRM---SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
G F + VF+R+ +EG+ T+ V+ A +G + G VVHG+ K+G
Sbjct: 274 NGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEE 333
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-L 328
V V N+L+DMY K +GEA +F+M K++ SWN+I+ + + G+ G L M
Sbjct: 334 VTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQR 393
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ + VT VLPACS L+ ++IHGY +G K D + NA +
Sbjct: 394 EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLK--------DELVANAFVAA 445
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC S+ A+ VF M K V+SWN +I + +G ++LD+F M ++ + PD T
Sbjct: 446 YAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTI 505
Query: 449 VGVLSACSHSGFLSQGREFLPLM 471
+L AC+ FL G+E M
Sbjct: 506 GSLLLACARLKFLRCGKEIHGFM 528
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 10/187 (5%)
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC H + GR++H + + S K +DV ++ ++ MY+ CGS D++ V
Sbjct: 98 LLRACGHHKNIHVGRKVHALV-------SASHKLRNDVVLSTRIIAMYSACGSPSDSRGV 150
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSHSGF 460
F +KD+ +N ++ GY + ++A+ +F + L PD T V AC+
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G E + + + G +I M G+ G + A ++ M N N V W +++
Sbjct: 211 VELG-EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVM 268
Query: 521 AASRLHG 527
A +G
Sbjct: 269 YACSENG 275
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 311/555 (56%), Gaps = 10/555 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLG 129
TSL+NMY K + A VF+ + + N F+++ M++G+ + + + D F M +
Sbjct: 157 TSLLNMYCKLGIVSDARRVFDGMP-QRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECP 215
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
++ ++ + +L +++HGL+ K GL V + ++LV Y K M A
Sbjct: 216 SEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAF 275
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VFE R+ + W+AM+ GYAQ GE A+ +F +M G + FT GVL+A +G
Sbjct: 276 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ HG++VK+G++ + V +AL+DMY K C+ +A E F+ + E DI W ++++
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
H Q G H+ L L+ RM G P T ++ L AC+ +AAL G+Q+H IV GL
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 455
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+ +AL MY+KCG++ D VF ++ +DV +WN +I G+ +G G A
Sbjct: 456 GAP--------VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 507
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
LD+F M PD +TF+ +L ACSH G + +G E+ LM YG+ P ++HY C++D
Sbjct: 508 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+L RAG L EA + ++ + +WR +L A R + D+ A +R+ +L G
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 627
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L+SNIY + K+ +V +RH MR + V K+PGCSW+EL +H F+ ++ HPEA++I
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 687
Query: 610 YAELHSLTARLREHG 624
A+L L +++ G
Sbjct: 688 NAQLRRLAKHMKDEG 702
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 243/488 (49%), Gaps = 23/488 (4%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ--MKYALFVFNNL-SCEPNVFTYNAM 105
+ G+ +H++ L++G SLIN YS + + A VF+++ +V ++N++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 106 ISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
++ + + LD + R + VLP ++F + H L
Sbjct: 89 LNPLSGH----RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALAC 144
Query: 162 KLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K+ + +VY+ ++L+N Y K + +A +VF+ +P R+ W+ MV GYA +A
Sbjct: 145 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 204
Query: 221 EVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
++FR M +E S F T VLSA+ + G +HG++VK G V V N+L+ M
Sbjct: 205 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K C+G A +FE E++ +W++++T + Q G D + +F +M +AGF P TF
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
VL A S L AL G+Q HG +V G +++ +AL+DMY KCG + DA+
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQ--------IYVKSALVDMYAKCGCIADAK 376
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
F ++ + D+ W M+ G+ +G+ +EAL +++ M + + P + T L AC+
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G++ L +YG+ + + M + G L + + +P+ + + W ++
Sbjct: 437 ALEPGKQ-LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSI 494
Query: 520 LAASRLHG 527
++ +G
Sbjct: 495 ISGFSQNG 502
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 20/289 (6%)
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCVGEALEIFEMMEE--KDIFSWNSI 307
++G +H +K G S PV N+LI+ Y + A +F+ + +D+ SWNS+
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ D R F MLS+ STVLP+ AA
Sbjct: 89 LNPLSGHRPLDALSR-FRSMLSS---------STVLPSPHSFAAAFTAAARAASAPAGTA 138
Query: 368 AKNGSCK---DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
A +CK + +V++ +L++MY K G + DA+ VF M +++ SW+ M+ GY +
Sbjct: 139 AHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 425 QGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+EA D+F M E + E VLSA S L G + L+ + G++ +
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI-VKDGLLDFVSV 257
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M +AG + A+ + E N + W ++ +G D A
Sbjct: 258 ENSLVTMYAKAGCMGAAFHV-FESSRERNSITWSAMITGYAQNGEADSA 305
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 304/543 (55%), Gaps = 17/543 (3%)
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
S+CC + + P ++++ Y D + + M + GV D T+
Sbjct: 233 SRCCSYSVNSSLVSPHYVPPET---ESLLNHCYRRDLP-SAMHVLDSMERRGVWADSITY 288
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
LIKCC AV E K++H +F G ++ + L+N Y+K +EEA +F+++P
Sbjct: 289 SELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPE 348
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+VV W M++ Y+ +A+ + M ++G+ + FT + VL A + K +
Sbjct: 349 RNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQ---L 405
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H ++K+G +S V V +ALID+Y K + EAL++F M D WNSI+ Q +
Sbjct: 406 HSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDG 465
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
D L L+ M GF D T ++VL AC+ L+ L GRQ H +++ K
Sbjct: 466 DEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL----------KFDQ 515
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+ +NNAL+DMY KCGS+ DA+ +F +M+KKDV SW+ MI G +G EAL++F M
Sbjct: 516 DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMK 575
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
KP+ +T +GVL ACSH+G +++G + M + YG+ P EHY C++D+LGRA +L
Sbjct: 576 VQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKL 635
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
++ +L M E + V WRTLL A R N DLA AA+ + +L+P G YVL+SNIY
Sbjct: 636 DDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIY 695
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++ +V ++R TM+++ +RK PGCSWIE+ +H FI D+SHP+ I +L+
Sbjct: 696 AISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQIDEINRQLNQFI 755
Query: 618 ARL 620
RL
Sbjct: 756 CRL 758
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 170/317 (53%), Gaps = 6/317 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C +++G+ +H ++ G LINMY K ++ A +F+ + E N
Sbjct: 292 IKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMP-ERN 350
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ MIS + + + + M + GV+P+ +TF +++ C + ++K++H
Sbjct: 351 VVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRAC---ERLYDLKQLHS 407
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K+GL+ DV++ SAL++ Y K + EALKVF E+ D V+WN+++ +AQ + +
Sbjct: 408 WIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDE 467
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +++ M + G + T+T VL A + + GR H V+K +D + + NAL+D
Sbjct: 468 ALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLD 525
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A IF M +KD+ SW++++ Q G L LF+ M G +P+ +T
Sbjct: 526 MYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHIT 585
Query: 339 FSTVLPACSHLAALMHG 355
VL ACSH + G
Sbjct: 586 ILGVLFACSHAGLVNEG 602
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 136/259 (52%), Gaps = 5/259 (1%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+++HS++++ G+ ++LI++YSK ++ AL VF + +V +N++I+ F
Sbjct: 403 KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSV-VWNSIIAAFAQ 461
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + L + MR++G D+ T +++ C +++LE+ + V L D D+ +
Sbjct: 462 HSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTS-LSLLELGR-QAHVHVLKFDQDLIL 519
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL++ Y KC +E+A +F + +DV+ W+ M+ G AQ G +AL +F M +G
Sbjct: 520 NNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGP 579
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNALIDMYGKGKCVGEAL 290
+ T+ GVL A G G + + G D G ++D+ G+ + + + +
Sbjct: 580 KPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMV 639
Query: 291 E-IFEMMEEKDIFSWNSIM 308
+ I EM E D+ +W +++
Sbjct: 640 KLIHEMNCEPDVVTWRTLL 658
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 204/632 (32%), Positives = 326/632 (51%), Gaps = 68/632 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L + H +L++ + + +L++ Y++ +++ A VF+ + N F+YNA++
Sbjct: 32 SLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLR-NTFSYNALL 90
Query: 107 SGF---------------------------------YSNDFAFKGLDFFNHMRQLGVLPD 133
S + + A L F M + +
Sbjct: 91 SAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLN 150
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
Y+F + C + +++HGLV + DV+IG+ALV+ Y KC+ +A +VF+
Sbjct: 151 AYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P R+VV WN+++ Y Q G +AL +F M G + T++ V+SA + +
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE 270
Query: 254 GRVVHGIVVKMGYDSGVPVM-NALIDMYGK------GKC--------------------- 285
GR VH +VK V+ NAL+DMY K +C
Sbjct: 271 GRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYA 330
Query: 286 ----VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
V +A +F M EK++ +WN ++ + Q G + +RLF ++ P T+
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC ++A L G+Q H +++ G + + DVF+ N+L+DMY K GS+ D V
Sbjct: 391 VLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPE--SDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M+ +D SWN MI+GY +G+ K+AL +F M + PD VT +GVLSAC HSG +
Sbjct: 449 FERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLV 508
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+GR M +G+ P+ +HYTC++D+LGRAG L EA EL MP E + V+W +LL
Sbjct: 509 DEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLG 568
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A RLH N +L E A R+F+L+P + G YVL+SN+Y GK+ +V +R +M+ + V K
Sbjct: 569 ACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQ 628
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
PGCSWIE+ ++ F++ D HP I++ L
Sbjct: 629 PGCSWIEIGSKMNVFLARDNRHPCRNEIHSTL 660
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 204/420 (48%), Gaps = 47/420 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA + +L+ G+++H + R+ D T+L++MY+KC + A VF+ + E
Sbjct: 156 SALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMP-E 214
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++N++I+ + N + L F M G PD+ T ++ C + A E +++
Sbjct: 215 RNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQV 274
Query: 157 HG-LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR----------------- 198
H +V + L D+ + +ALV+ Y KC EA +F+ +P R
Sbjct: 275 HAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSAN 334
Query: 199 --------------DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+V+ WN ++ YAQ GE +A+ +F ++ ++ IW + +T VL+A
Sbjct: 335 VEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNA 394
Query: 245 LIMMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ + G+ H V+K G+ +S V V N+L+DMY K + + ++FE M
Sbjct: 395 CGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 454
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+D SWN+++ + Q G L LF+RML + PD VT VL AC H + GR+
Sbjct: 455 RDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRH 514
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMI 417
++ + +G D ++D+ + G +++A+ + M ++ D W ++
Sbjct: 515 FHFMTED----HGITPSRDHY---TCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLL 567
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 311/555 (56%), Gaps = 10/555 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLG 129
TSL+NMY K + A VF+ + + N F+++ M++G+ + + + D F M +
Sbjct: 51 TSLLNMYCKLGIVSDARRVFDGMP-QRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECP 109
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
++ ++ + +L +++HGL+ K GL V + ++LV Y K M A
Sbjct: 110 SEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAF 169
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VFE R+ + W+AM+ GYAQ GE A+ +F +M G + FT GVL+A +G
Sbjct: 170 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 229
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ HG++VK+G++ + V +AL+DMY K C+ +A E F+ + E DI W ++++
Sbjct: 230 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 289
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
H Q G H+ L L+ RM G P T ++ L AC+ +AAL G+Q+H IV GL
Sbjct: 290 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 349
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+ +AL MY+KCG++ D VF ++ +DV +WN +I G+ +G G A
Sbjct: 350 GAP--------VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 401
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
LD+F M PD +TF+ +L ACSH G + +G E+ LM YG+ P ++HY C++D
Sbjct: 402 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 461
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+L RAG L EA + ++ + +WR +L A R + D+ A +R+ +L G
Sbjct: 462 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSA 521
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L+SNIY + K+ +V +RH MR + V K+PGCSW+EL +H F+ ++ HPEA++I
Sbjct: 522 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 581
Query: 610 YAELHSLTARLREHG 624
A+L L +++ G
Sbjct: 582 NAQLRRLAKHMKDEG 596
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 198/370 (53%), Gaps = 25/370 (6%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H +++ G++D SL+ MY+K M A VF + S E N T++AMI+G+
Sbjct: 133 GEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES-SRERNSITWSAMITGYA 191
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N A + F+ M G P ++TF ++ D+ A+ K+ HGL+ KLG ++ +Y
Sbjct: 192 QNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIY 251
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ SALV+ Y KC + +A + F++L D+VLW AMV+G+ Q GE +AL ++ RM KEG
Sbjct: 252 VKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEG 311
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I S+ T+ L A + + G+ +H +VK G G PV +AL MY K + + +
Sbjct: 312 IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGM 371
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F + ++D+ +WNSI++ Q G +G L LF+ M G PD +TF +L ACSH+
Sbjct: 372 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMG 431
Query: 351 ALMHG---------------RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT----- 390
+ G R H +V+ L++ G K+ D F+ + +D T
Sbjct: 432 LVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKD-FIESITIDHGTCLWRI 490
Query: 391 ---KCGSMRD 397
C S+RD
Sbjct: 491 VLGACRSLRD 500
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 12/400 (3%)
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQFMEEA 188
VLP ++F + H L K+ + +VY+ ++L+N Y K + +A
Sbjct: 7 VLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDA 66
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIM 247
+VF+ +P R+ W+ MV GYA +A ++FR M +E S F T VLSA+ +
Sbjct: 67 RRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSV 126
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
G +HG++VK G V V N+L+ MY K C+G A +FE E++ +W+++
Sbjct: 127 PLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAM 186
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+T + Q G D + +F +M +AGF P TF VL A S L AL G+Q HG +V G
Sbjct: 187 ITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGF 246
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+++ +AL+DMY KCG + DA+ F ++ + D+ W M+ G+ +G+ +
Sbjct: 247 EVQ--------IYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHE 298
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EAL +++ M + + P + T L AC+ L G++ L +YG+ + +
Sbjct: 299 EALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQ-LHTQIVKYGLGLGAPVGSAL 357
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G L + + +P+ + + W ++++ +G
Sbjct: 358 STMYSKCGNLEDGMSVFRRIPDR-DVIAWNSIISGFSQNG 396
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%), Gaps = 27/226 (11%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFN 91
+T + L+ CA L+ G+++H+ +++ G+ + +P+ ++L MYSKC ++ + VF
Sbjct: 317 STIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVG-SALSTMYSKCGNLEDGMSVFR 375
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + +V +N++ISGF N LD F M+ G +PD TF ++ C C M ++
Sbjct: 376 RIP-DRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINIL-CACSHMGLV 433
Query: 152 E--------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVL 202
+ + K +GL + LD Y + +V+ + ++EA E + + L
Sbjct: 434 DRGWEYFSLMTKDYGLTPR----LDHY--ACMVDILSRAGMLKEAKDFIESITIDHGTCL 487
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
W ++ + +F R+ + G TG SA I++
Sbjct: 488 WRIVLGACRSLRDFDVGAYAGERLMELG--------TGDSSAYILL 525
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ +V++ +L++MY K G + DA+ VF M +++ SW+ M+ GY + +EA D+F
Sbjct: 44 VSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRL 103
Query: 436 MCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M E + E VLSA S L G + L+ + G++ + ++ M +A
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI-VKDGLLDFVSVENSLVTMYAKA 162
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G + A+ + E N + W ++ +G D A
Sbjct: 163 GCMGAAFHV-FESSRERNSITWSAMITGYAQNGEADSA 199
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 199/581 (34%), Positives = 325/581 (55%), Gaps = 15/581 (2%)
Query: 28 HP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
HP F LA+ I + C ++KG ++H +++R+G TSLI+ YSK ++
Sbjct: 148 HPNEFVLASVI---RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEE 204
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ LS E T+ +I+G+ + L+ F MR+ V+PD+Y ++ C
Sbjct: 205 ARLVFDQLS-EKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACS 263
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + K+IH V + G ++DV + + L++ Y KC ++ K+F+++ +++++ W
Sbjct: 264 MLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT 323
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++GY Q +A+++F M++ G F T VL++ + GR VH +K
Sbjct: 324 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKAN 383
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+S V N LIDMY K + +A ++F++M E+++ S+N+++ + L LF
Sbjct: 384 LESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFH 443
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M +P+ TF+ ++ A S+LA+L HG+Q H +V GL C F+ NAL
Sbjct: 444 EMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL---DFCP-----FVTNAL 495
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCGS+ +A+ +F +DV WN MI + G+ +EAL MF M + ++P+
Sbjct: 496 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 555
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTFV VLSACSH+G + G M +G+ P EHY CV+ +LGR+G+L EA E
Sbjct: 556 VTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 614
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP E +VWR+LL+A R+ GN +L + AA+ +P G+Y+L+SNI+ + G + +
Sbjct: 615 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 674
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
V +R M V K PG SWIE+ + ++ FI+ D +H EA
Sbjct: 675 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHREA 715
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 260/499 (52%), Gaps = 20/499 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQL + + + IH ++ +G+ LIN+ SK ++ A VF+ + N
Sbjct: 56 LQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP-HKN 114
Query: 99 VFTYNAMISGFYSNDFAFKGL-DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+++M+S + ++ + L F + R+ G P+++ +I+ C + V + ++H
Sbjct: 115 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 174
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V + G D DVY+G++L++ Y K +EEA VF++L + V W ++ GY + G
Sbjct: 175 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 234
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+LE+F +M + + R+ V+ VLSA M+ F + G+ +H V++ G + V V+N LI
Sbjct: 235 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 294
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D Y K V ++F+ M K+I SW ++++ + Q ++LF M G++PD
Sbjct: 295 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 354
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
++VL +C AL GRQ+H Y + L D F+ N L+DMY K + D
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLE--------SDEFVKNGLIDMYAKSNLLID 406
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF M++++V S+N MI GY + EAL++F M KP+E TF +++A S+
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASN 466
Query: 458 SGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA---NP 513
L G++F L++ P + + ++DM + G + EA + M N + +
Sbjct: 467 LASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARK----MFNSSIWRDV 520
Query: 514 VVWRTLLAASRLHGNTDLA 532
V W ++++ HG + A
Sbjct: 521 VCWNSMISTHAQHGEAEEA 539
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 9/336 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P + F L++ ++ K IHG + GL D ++ + L+N K ++ A V
Sbjct: 47 PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGF 250
F+++P ++++ W++MV+ Y+Q G +AL VF + K G + F + V+ A +G
Sbjct: 107 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 166
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +HG VV+ G+D V V +LID Y K + EA +F+ + EK +W +I+
Sbjct: 167 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 226
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ +CG +L LF +M PD S+VL ACS L L G+QIH Y++ G
Sbjct: 227 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM- 285
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + N L+D YTKC ++ + +F +M K++ SW MI GY + EA+
Sbjct: 286 -------DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 338
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+F M KPD VL++C L QGR+
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 374
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P F+ +L ++H + IHG I+V+GL D F+ N L+++ +K
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ--------SDTFLANILINVCSK 96
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVG 450
+ +A++VF KM K++ +W+ M+ Y G +EAL +F ++ P+E
Sbjct: 97 SDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLAS 156
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
V+ AC+ G + +G + + R G + T +ID + G + EA L +E
Sbjct: 157 VIRACTQLGVVEKGAQLHGFV-VRSGFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSE 214
Query: 511 ANPVVWRTLLA 521
V W T++A
Sbjct: 215 KTAVTWTTIIA 225
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 213/652 (32%), Positives = 348/652 (53%), Gaps = 48/652 (7%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
+P S +F +S + P+ + L L N+ ++IHS +++TG+ ++
Sbjct: 7 SPSPSILHFLPAS-----DPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVF 61
Query: 69 SITSLINM--YSKCCQMKYALFVF--NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
+ LI+ S + YAL +F N + NVF +N++I G+ + L F+
Sbjct: 62 VQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSR 121
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS----------- 173
M GV P+ +TFP L K C A E K++H KL L + ++ +
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 174 --------------------ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
AL+ Y+ +++A ++F+E+P++DVV WNAM++GY Q
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS 241
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G F +A+ F M + + ++ T+ VLSA + G+ + V G+ S + +
Sbjct: 242 GRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLT 301
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NALIDMY K A E+F+ +EEKD+ SWN+++ + ++ L LF+ ML + +
Sbjct: 302 NALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVK 361
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ VTF +L AC+ L AL G+ +H YI N ++ + + +L+DMY KCG
Sbjct: 362 PNDVTFLGILHACACLGALDLGKWVHAYIDKN-------LRNSSNASLWTSLIDMYAKCG 414
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL-KPDEVTFVGVL 452
+ A+ VF M +++ASWN M+ G+ M G + AL +FS M L +PD++TFVGVL
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC+ +G + G ++ M YG+ P ++HY C+ID+L RA + EA L M E +
Sbjct: 475 SACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPD 534
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W +LL+A + HG + E A+R+FQLEP + G +VL+SNIY G++++V IR
Sbjct: 535 GAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTR 594
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + ++K PGC+ IE+ +H F+ D+ HPE +IY L+ + L E+G
Sbjct: 595 LNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENG 646
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 342/608 (56%), Gaps = 21/608 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F P T + I + C ++ G+++H +++++G ++ +LI+MY++ Q+ +
Sbjct: 255 FPDPLTFGSIIKA---CCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVH 311
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCC 144
A VF +S + ++ ++ +MI+GF + + L F M RQ P+++ F + C
Sbjct: 312 ASDVFTMISTK-DLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSAC 370
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
++ ++IHG+ K GL +V+ G +L + Y K F+ A++ F ++ D+V WN
Sbjct: 371 RSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWN 430
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A++ ++ G+ ++A+ F +M G+ T +L A G +H ++K+
Sbjct: 431 AIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKI 490
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTV---HEQCGNHDGT 320
G D V N+L+ MY K + +A +F ++ E ++ SWN+I++ H+Q G
Sbjct: 491 GLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGE---V 547
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
RLF ML + +PD +T +T+L C+ LA+L G Q+H + V +GL + DV
Sbjct: 548 FRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGL--------VVDVS 599
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
++N L+DMY KCGS++ A+ VF D+ SW+ +I+GY G G EAL++F M
Sbjct: 600 VSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLG 659
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
++P+EVT++GVLSACSH G + +G F ME G+ PT EH +C++D+L RAG L EA
Sbjct: 660 VQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEA 719
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
M + +W+TLLA+ + HGN D+AE AA+ + +L+P + VL+SNI+ +
Sbjct: 720 ENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASV 779
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
G ++EV +R+ M+Q V+K PG SWI +KD +H F S D SH + IY L L ++
Sbjct: 780 GNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQM 839
Query: 621 REHG-DCC 627
+ G D C
Sbjct: 840 LDDGYDPC 847
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 235/483 (48%), Gaps = 13/483 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C +L+ G++IH ++L++ + ++NMY KC +K A F+ + NV +
Sbjct: 167 CTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLR-NVVS 225
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ MISG+ N + + M Q G PD TF +IK CC + +++HG V
Sbjct: 226 WTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVI 285
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K G D + +AL++ Y + + A VF + +D++ W +M+ G+ Q+G +AL
Sbjct: 286 KSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 345
Query: 222 VFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+FR M ++G + + F V SA + + GR +HG+ K G V +L DMY
Sbjct: 346 LFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMY 405
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + A+ F +E D+ SWN+I+ G+ + + F +M+ G PD +TF
Sbjct: 406 AKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++L AC + G QIH YI+ GL K + + N+L+ MYTKC ++ DA
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAA--------VCNSLLTMYTKCSNLHDAFN 517
Query: 401 VFTKMSKK-DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF +S+ ++ SWN ++ Q E +F M ++ KPD +T +L C+
Sbjct: 518 VFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELA 577
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G + + + G+V + +IDM + G L A ++ + N + V W +L
Sbjct: 578 SLEVGNQ-VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQN-PDIVSWSSL 635
Query: 520 LAA 522
+
Sbjct: 636 IVG 638
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 202/412 (49%), Gaps = 11/412 (2%)
Query: 117 KGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ LD FN H + + + T+ LI C + ++ KKIH + K D+ + + +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+N Y KC +++A K F+ + LR+VV W M++GY+Q G+ + A+ ++ +M + G +
Sbjct: 199 LNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDP 258
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T ++ A + G GR +HG V+K GYD + NALI MY + + A ++F M
Sbjct: 259 LTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM 318
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF-QPDLVTFSTVLPACSHLAALMH 354
+ KD+ SW S++T Q G L LF M GF QP+ F +V AC L
Sbjct: 319 ISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEF 378
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
GRQIHG GL +N VF +L DMY K G + A F ++ D+ SWN
Sbjct: 379 GRQIHGMCAKFGLGRN--------VFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWN 430
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+I + G EA+ F M L PD +TF+ +L AC ++QG + + +
Sbjct: 431 AIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYI-IK 489
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
G+ ++ M + L++A+ + + AN V W +L+A H
Sbjct: 490 IGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQH 541
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 201/591 (34%), Positives = 306/591 (51%), Gaps = 37/591 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G++ HSY ++ G+ + SL+++Y KC +K A F
Sbjct: 354 TVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF--- 410
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
Y + D K F M+ G++P+++T+P ++K C + A
Sbjct: 411 ------LCYGQL-------DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLG 457
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH V K G +VY+ S L++ Y K ++ ALK+F L DVV W AM+ GY Q
Sbjct: 458 EQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQH 517
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+F +AL +F+ M +GI +SA + GR +H GY + +
Sbjct: 518 DKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIG 577
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+ +Y + V EA F+ + KD SWNS+++ Q G + L +F +M AG +
Sbjct: 578 NALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLE 637
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ TF + + A +++A + G+QIHG I G + ++NAL+ +Y KCG
Sbjct: 638 INSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDS--------ETEVSNALITLYAKCG 689
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ D SWN MI GY G G EAL +F M + + P+ VTFVGVLS
Sbjct: 690 TIDDI-------------SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLS 736
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + +G + M + +VP EHY CV+D+LGR+G L+ A MP + +
Sbjct: 737 ACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDA 796
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+VWRTLL+A +H N D+ E AA + +LEP YVL+SN+Y GK++ R M
Sbjct: 797 MVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMM 856
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + V+K PG SW+E+ + +H F + D++HP A IY L L R E+G
Sbjct: 857 KDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENG 907
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 232/496 (46%), Gaps = 39/496 (7%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L C L C + G+++H +L+ G +L+ +YS+ + A +F+
Sbjct: 251 LLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFH 310
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+S V +YN++ISG + + L F M PD T L+ C V A+
Sbjct: 311 CMSQRDRV-SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALP 369
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K+ H K G+ D+ + +L++ Y+KC ++ A + F Y
Sbjct: 370 NGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFL---------------CYG 414
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q+ +K+ ++F +M EGI ++FT +L +G G +H V+K G+ V
Sbjct: 415 QLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVY 474
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + LIDMY K + AL+IF ++E D+ SW +++ + Q L LF M G
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG 534
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ D + F++ + AC+ + AL GRQIH ++G + DD+ + NAL+ +Y +
Sbjct: 535 IKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYS--------DDLSIGNALVSLYAR 586
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG +R+A F ++ KD SWN ++ G+ G +EAL++F+ M +A L+ + TF
Sbjct: 587 CGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSA 646
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+SA ++ + G++ ++ + G E +I + + G +++
Sbjct: 647 VSAAANIANVRIGKQIHGMIR-KTGYDSETEVSNALITLYAKCGTIDD------------ 693
Query: 512 NPVVWRTLLAASRLHG 527
+ W +++ HG
Sbjct: 694 --ISWNSMITGYSQHG 707
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 219/471 (46%), Gaps = 40/471 (8%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ + +G S LI++Y K + A VF NL +V ++ AMISG
Sbjct: 184 EQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSV-SWVAMISGLSQ 242
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N + + + F + ++ C V K++HGLV K G + Y+
Sbjct: 243 NGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYV 288
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV Y + + A ++F + RD V +N++++G AQ G ++AL +F++M+ +
Sbjct: 289 CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 348
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
TV +LSA +G NG+ H +K G S + V +L+D+Y K + A E
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F + Q N + + ++F +M G P+ T+ ++L C+ L A
Sbjct: 409 FF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
G QIH ++ G N V++++ L+DMY K G + A +F ++ + DV
Sbjct: 454 TDLGEQIHTQVLKTGFQFN--------VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVV 505
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY + EAL++F M + +K D + F +SAC+ L QGR+ +
Sbjct: 506 SWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQ-IHAQ 564
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G + ++ + R G++ EAY A + V W +L++
Sbjct: 565 SCLSGYSDDLSIGNALVSLYARCGKVREAYA-AFDQIYAKDNVSWNSLVSG 614
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 209/449 (46%), Gaps = 49/449 (10%)
Query: 88 FVFNNLSCEPNVFT---------YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFP 138
F +L+C NVF +N + + F + + F M V D+ F
Sbjct: 108 LAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFA 167
Query: 139 CLIKCCC-DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
+++ C + ++ V++IH G + +I + L++ Y K F+ A KVFE L
Sbjct: 168 VVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKA 227
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD V W AM++G +Q G +A+ +F ++ VLSA + FF+ G+ +
Sbjct: 228 RDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQL 273
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
HG+V+K G+ S V NAL+ +Y + + A +IF M ++D S+NS+++ Q G
Sbjct: 274 HGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYI 333
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L LF +M +PD VT +++L AC+ + AL +G+Q H Y + G+
Sbjct: 334 NRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS-------- 385
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+ + +L+D+Y KC ++ A F L YG ++ +F+ M
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQ 430
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ P++ T+ +L C+ G G + + + G + + +IDM + G+L
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQ-IHTQVLKTGFQFNVYVSSVLIDMYAKHGKL 489
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLH 526
+ A ++ + E + V W ++A H
Sbjct: 490 DHALKIFRRL-KENDVVSWTAMIAGYTQH 517
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 224/520 (43%), Gaps = 76/520 (14%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
G+ + + M Q GV + TF L++ C + + Y G L++
Sbjct: 65 GIGYLHLMEQHGVRANSQTFLWLLEGCLNSRSF-------------------YDGLKLID 105
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
YL + A+ VF+E+P+R + WN + N + + +FRRM + +
Sbjct: 106 FYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERI 165
Query: 238 VTGVLSALIMMGF-FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
VL F+ +H + G++S + N LID+Y K + A ++FE +
Sbjct: 166 FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL 225
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+ +D SW ++++ Q G + + LF ++ VL AC+ + G+
Sbjct: 226 KARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGK 271
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+HG ++ G + + ++ NAL+ +Y++ G++ A+ +F MS++D S+N +
Sbjct: 272 QLHGLVLKQGFSS--------ETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSL 323
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I G G AL +F M KPD VT +LSAC+ G L G++F + G
Sbjct: 324 ISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS-YAIKAG 382
Query: 477 VVPTIEHYTCVIDM----------------LGRAGQLNEAYELALAMPNEA---NPVVWR 517
+ I ++D+ G+ LN+++++ M E N +
Sbjct: 383 MTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYP 442
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS---NIYVAGGKYEEVLDIRHTMR 574
++L G TDL E +V L+ G N + S ++Y GK + L I ++
Sbjct: 443 SILKTCTTLGATDLGEQIHTQV--LKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK 500
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
+ +V SW + G + D+ EA +++ E+
Sbjct: 501 ENDV-----VSWTAMIAG---YTQHDK-FTEALNLFKEMQ 531
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 207/591 (35%), Positives = 339/591 (57%), Gaps = 11/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TCI L +CA + G ++H ++ +G P +L+ MYSKC + A +FN +
Sbjct: 250 TCI--LSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTM 307
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T+N +I+G+ N F + FN M GV PD TF + + ++
Sbjct: 308 P-QTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 366
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + + + DVY+ SAL++ Y K +E A K+F++ L DV + AM++GY
Sbjct: 367 KEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLH 426
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G A+ FR + +EG+ + T+ VL A + K G+ +H ++K ++ V V
Sbjct: 427 GLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVG 486
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+A+ DMY K + A E F M E D WNS+++ Q G + + LF +M +G +
Sbjct: 487 SAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAK 546
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D V+ S+ L + ++L AL +G+++HGY++ N + D F+ +AL+DMY+KCG
Sbjct: 547 FDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSS--------DTFVASALIDMYSKCG 598
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A+ VF M+ K+ SWN +I YG G +E LD+F M A + PD VTF+ ++S
Sbjct: 599 KLALARCVFNLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIIS 658
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC H+G + +G + M YG+ +EHY C++D+ GRAG+L+EA++ +MP +
Sbjct: 659 ACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDA 718
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW TLL A RLHGN +LA++A++ + +L+P + G YVL+SN++ G++ VL +R M
Sbjct: 719 GVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLM 778
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ V+K PG SWI++ G H F +++ +HPE+ IY L+SL LR+ G
Sbjct: 779 KEKGVQKIPGYSWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQG 829
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 271/520 (52%), Gaps = 19/520 (3%)
Query: 19 TSSGNQTFNHPFT---LATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
TS N + P T L T + SL + C+ + +Q+ +++H+ ++ G+ D + ++
Sbjct: 27 TSICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVL 86
Query: 75 NMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+Y C ++ +F L C N +N MI G Y + L F+ M V PD
Sbjct: 87 GLYVLCGRISDGGNLFFGLELC--NALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPD 144
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
KYTFP +IK C + V +H LG +D+++GSAL+ Y ++ +A +VF+
Sbjct: 145 KYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFD 204
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
ELP RD +LWN M++GY + G+F+ A+ F M ++ T T +LS G F
Sbjct: 205 ELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCL 264
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G VHG+V+ G++ V N L+ MY K + +A ++F M + D +WN ++ + Q
Sbjct: 265 GTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQ 324
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G D LF+ M+SAG +PD VTF++ LP+ +L H +++H YIV + +
Sbjct: 325 NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF---- 380
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
DV++ +AL+D+Y K G + A+ +F + + DVA MI GY + G +A++ F
Sbjct: 381 ----DVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTF 436
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLG 492
+ + + P+ +T VL AC+ L G+E +++ + + + + + DM
Sbjct: 437 RWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVG--SAITDMYA 494
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ G+L+ AYE M +E + + W +++++ +G ++A
Sbjct: 495 KCGRLDLAYEFFRRM-SETDSICWNSMISSFSQNGKPEMA 533
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 317/557 (56%), Gaps = 13/557 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G++ H+ +++ TSL+ MY K ++ L VF + E N +T++ M+SG+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYA 195
Query: 111 SN---DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + A K + F ++ G D Y F ++ + V ++IH + K GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
V + +ALV Y KC+ + EA K+F+ R+ + W+AMV GY+Q GE +A+++F RM
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
GI S +T+ GVL+A + + + G+ +H ++K+G++ + AL+DMY K C+
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A + F+ ++E+D+ W S+++ + Q +++ L L+ RM +AG P+ T ++VL ACS
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
LA L G+Q+HG+ + +G +V + +AL MY+KCGS+ D +VF +
Sbjct: 435 SLATLELGKQVHGHTIKHGFGL--------EVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KDV SWN MI G +GQG EAL++F M ++PD+VTFV ++SACSH GF+ +G +
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M + G+ P ++HY C++D+L RAGQL EA E + + +WR LL+A + HG
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+L A +++ L YV +S IY A G+ +V + MR V K GCSWI
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Query: 588 ELKDGLHTFISSDRSHP 604
ELK+ H F+ D HP
Sbjct: 667 ELKNQYHVFVVGDTMHP 683
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 265/515 (51%), Gaps = 19/515 (3%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
QT +P T +T + L + Q NL G+ +H ++RTG L+N Y+KC ++
Sbjct: 7 QTELNPHT-STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
A +FN + C+ +V ++N++I+G+ N ++ + F MR +LP+ YT +
Sbjct: 66 AKAHSIFNAIICK-DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
K + + ++ H LV K+ D+Y+ ++LV Y K +E+ LKVF +P R+
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 201 VLWNAMVNGYAQIGEFHKALEVFR---RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
W+ MV+GYA G +A++VF R +EG S + T VLS+L + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H I +K G V + NAL+ MY K + + EA ++F+ +++ +W++++T + Q G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
++LF RM SAG +P T VL ACS + L G+Q+H +++ G ++
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH------- 356
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+F AL+DMY K G + DA+ F + ++DVA W +I GY + +EAL ++ M
Sbjct: 357 -LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
A + P++ T VL ACS L G++ + ++G + + + M + G L
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + PN+ + V W +++ +G D A
Sbjct: 475 EDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEA 508
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 322/569 (56%), Gaps = 13/569 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ L++G +H+ ++T + ++N+Y+KC +++ A VF+ +S E N+ +
Sbjct: 13 CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS-ERNLVS 71
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
++AMISG+ L F+ +L ++P++Y + +I C + +++ K+IHG
Sbjct: 72 WSAMISGYEQIGEPISALGLFS---KLNIVPNEYVYASVISACASLKGLVQGKQIHGQAL 128
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K GLD ++ +AL+ Y+KC +AL + E + V +NA++ G+ + + K E
Sbjct: 129 KFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFE 188
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
V R M ++G + RFT G+L K G ++H +K+ +S + N +I MY
Sbjct: 189 VLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYS 248
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFS 340
K + EA + F +EEKD+ SWN+ ++ C +H+ L F ML+ +PD TF+
Sbjct: 249 KLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFA 308
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+ L ACS LA++ +G+QIHG+++ L + DV NAL++MY KCG + A
Sbjct: 309 SALAACSGLASMCNGKQIHGHLIRTRLYQ--------DVGAGNALINMYAKCGCIAKAYY 360
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F+KM +++ SWN MI G+G G G +A ++F+ M +KPD VTFVG+L+A +H+G
Sbjct: 361 IFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGL 420
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +G + ME YG+ P IEH++C+ID+LGRAG+LNEA E P + VV +LL
Sbjct: 421 VDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLL 480
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
+A RLHG+ D + A+++ +L+P YVL+SN+Y + ++ V + ++ ++K
Sbjct: 481 SACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKK 540
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSI 609
PG S IE+ F D SH + I
Sbjct: 541 EPGHSLIEVNGTFEKFTVVDFSHSRIEEI 569
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 190/391 (48%), Gaps = 18/391 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
LI C A+ + +H + K DV + + ++N Y KC+ + EA +VF+E+ R+
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V W+AM++GY QIGE AL +F SK I + + V+SA + G+ +HG
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLF---SKLNIVPNEYVYASVISACASLKGLVQGKQIHG 125
Query: 260 IVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
+K G DS V NALI MY K GKC L E +E + ++N+++T + D
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPV-AYNALITGFVENQQPD 184
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+ M GF PD TF +L C+ L G +H + K
Sbjct: 185 KGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTI--------KLKLNST 236
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC- 437
F+ N ++ MY+K + +A+ F + +KD+ SWN I ++AL+ F M
Sbjct: 237 AFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLN 296
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQ 496
E +++PDE TF L+ACS + G++ L+ +R + + +I+M + G
Sbjct: 297 ECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTR--LYQDVGAGNALINMYAKCGC 354
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ +AY + M ++ N V W T++A HG
Sbjct: 355 IAKAYYIFSKMEHQ-NLVSWNTMIAGFGNHG 384
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 5/261 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + +L++G+ +H ++ + + +I MYSK ++ A F ++
Sbjct: 204 TFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSI 263
Query: 94 SCEPNVFTYNAMISG-FYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVL 151
E ++ ++N IS + ND K L+ F M + V PD++TF + C + ++
Sbjct: 264 E-EKDLISWNTFISSCSHCNDHE-KALEAFKEMLNECRVRPDEFTFASALAACSGLASMC 321
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K+IHG + + L DV G+AL+N Y KC + +A +F ++ +++V WN M+ G+
Sbjct: 322 NGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFG 381
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYDSGV 270
G KA E+F +M G+ T G+L+A G G V + + G +
Sbjct: 382 NHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEI 441
Query: 271 PVMNALIDMYGKGKCVGEALE 291
+ LID+ G+ + EA E
Sbjct: 442 EHFSCLIDLLGRAGRLNEAKE 462
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ +A+ C+ ++ G++IH +++RT + + +LINMY+KC + A ++
Sbjct: 305 FTFASALAA---CSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYI 361
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N+ ++N MI+GF ++ F K + F M+ +GV PD TF L+
Sbjct: 362 FSKME-HQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGL 420
Query: 150 VLEVKKIHGLVF------KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVL 202
V E GLV+ G+ ++ S L++ + + EA + ++ P D V+
Sbjct: 421 VDE-----GLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVV 475
Query: 203 WNAMVNG 209
++++
Sbjct: 476 LGSLLSA 482
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 342/601 (56%), Gaps = 18/601 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PFT A+ ++++ A Q L GQ +H+ ++ G S SL+NMY+KC ++
Sbjct: 198 WPNPFTFASVLSAV---ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VFN + ++ ++N +++G N+ + L F+ R + T+ +IK C
Sbjct: 255 AKSVFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWN 204
++ + +++H V K G L + +AL + Y KC + +AL +F R+VV W
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A+++G Q G+ A+ +F RM ++ + + FT + +L A + + + +H V+K
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQ----IHAQVIKT 429
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y V AL+ Y K +AL IF+M+E+KD+ +W+++++ H Q G+ +G LF
Sbjct: 430 NYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489
Query: 325 DRMLSAGFQPDLVTFSTVLPACS-HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
++M G +P+ T S+V+ AC+ A + GRQ H + + D + +++
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISI--------KYRYHDAICVSS 541
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+ MY++ G++ AQ+VF + + +D+ SWN MI GY G +A++ F M + ++
Sbjct: 542 ALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQM 601
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D VTF+ V+ C+H+G + +G+++ M + + PT+EHY C++D+ RAG+L+E L
Sbjct: 602 DGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSL 661
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP A +VWRTLL A R+H N +L + +A ++ LEP YVL+SNIY A GK+
Sbjct: 662 IRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKW 721
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+E ++R M + V+K GCSWI++K+ +H+FI+ D+SHP + IY +L + RL++
Sbjct: 722 KERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQD 781
Query: 624 G 624
G
Sbjct: 782 G 782
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 217/427 (50%), Gaps = 21/427 (4%)
Query: 113 DFAFKG-----LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
D+A +G LD F+ R+ GVL D T C++K C V + +++H L K G D
Sbjct: 73 DYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDR 132
Query: 168 -DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+V G++LV+ Y+KC + E ++VFE +P ++VV W +++ G A + + +F RM
Sbjct: 133 GEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRM 192
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
EGIW + FT VLSA+ G G+ VH VK G S V V N+L++MY K V
Sbjct: 193 RAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLV 252
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A +F ME +D+ SWN++M + L+LF + + T++TV+ C
Sbjct: 253 EDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLC 312
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
++L L RQ+H ++ +G G+ + AL D Y+KCG + DA +F+ +
Sbjct: 313 ANLKQLALARQLHSCVLKHGFHLTGN--------VMTALADAYSKCGELADALNIFSMTT 364
Query: 407 -KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V SW +I G +G A+ +FS M E ++ P+E T+ +L A S + +
Sbjct: 365 GSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKA---SLSILPPQ 421
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++++ Y +P + T ++ + G +A + M + + V W +L+
Sbjct: 422 IHAQVIKTNYQHIPFVG--TALLASYSKFGSTEDALSI-FKMIEQKDVVAWSAMLSCHAQ 478
Query: 526 HGNTDLA 532
G+ + A
Sbjct: 479 AGDCEGA 485
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 233/499 (46%), Gaps = 20/499 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFN 91
AT L+ C + G+++H ++ G +S TSL++MY KC + + VF
Sbjct: 100 ATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFE 159
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + NV T+ ++++G + + F MR G+ P+ +TF ++ A+
Sbjct: 160 GMP-KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD 218
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+++H K G V++ ++L+N Y KC +E+A VF + RD+V WN ++ G
Sbjct: 219 LGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL- 277
Query: 212 QIGEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q+ E +AL++F M++ T V+ + R +H V+K G+
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
VM AL D Y K + +AL IF M +++ SW +I++ Q G+ + LF RM
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ T+S +L A + QIH ++ F+ AL+ Y
Sbjct: 398 DRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIP--------FVGTALLASY 445
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K GS DA +F + +KDV +W+ M+ + G + A +F+ M +KP+E T
Sbjct: 446 SKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTIS 505
Query: 450 GVLSACS-HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V+ AC+ S + QGR+F + +Y I + ++ M R G ++ A ++
Sbjct: 506 SVIDACACPSAGVDQGRQFHAI-SIKYRYHDAICVSSALVSMYSRKGNIDSA-QIVFERQ 563
Query: 509 NEANPVVWRTLLAASRLHG 527
+ + V W ++++ HG
Sbjct: 564 TDRDLVSWNSMISGYAQHG 582
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 321/590 (54%), Gaps = 13/590 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ + CA + L G+++H++ ++ + T+++++Y+K + A F L
Sbjct: 255 SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL--- 311
Query: 97 PN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
PN V T NAM+ G + + F M + + D + + C + + +
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H L K G D+D+ + +A+++ Y KC+ + EA +F+ + +D V WNA++ Q G
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ + F M + G+ FT VL A + + G +VH V+K G S V +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
++DMY K + EA ++ + + + + SWN+I++ + + F ML G +P
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D TF+TVL C++LA + G+QIHG I+ + +DD ++++ L+DMY KCG
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEM--------LDDEYISSTLVDMYAKCGD 603
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M D+ +VF K+ K+D SWN MI GY + G G EAL MF M + + P+ TFV VL A
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 663
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH G G + LM + Y + P +EH+ C++D+LGR+ EA + +MP +A+ V
Sbjct: 664 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 723
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W+TLL+ ++ + ++AE+AA V L+P Y+L+SN+Y GK+ +V R ++
Sbjct: 724 IWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLK 783
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
Q ++K PGCSWIE++ +H F+ D++HP + +Y L+ L ++ G
Sbjct: 784 QGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 833
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 257/495 (51%), Gaps = 23/495 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ L G ++H+ ++TG+ + ++L++MY KC + AL F + E N
Sbjct: 156 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERN 214
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A I+G N+ +GL+ F M++LG+ + ++ + C + + +++H
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP V NAM+ G + G +
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F+ M + I +++GV SA + G+ VH + +K G+D + V NA++D
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+YGK K + EA IF+ M++KD SWN+I+ EQ G++D T+ F+ ML G +PD T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL AC+ L +L +G +H ++ +GL D F+ + ++DMY KCG + +A
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGS--------DAFVASTVVDMYCKCGIIDEA 506
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q + ++ + V SWN ++ G+ ++ + +EA FS M + LKPD TF VL C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ G++ +G + E + ++DM + G + ++ L + +
Sbjct: 567 ATIELGKQI-------HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL-LVFEKVEKRD 618
Query: 513 PVVWRTLLAASRLHG 527
V W ++ LHG
Sbjct: 619 FVSWNAMICGYALHG 633
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 243/486 (50%), Gaps = 23/486 (4%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ YS + A+ +F+ + +P+V ++NA++SG+ + +D F M +
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMP-DPDVVSWNALVSGYCQRGMFQESVDLFVEMAR 142
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV PD+ TF L+K C + + ++H L K GL++DV GSALV+ Y KC+ +++
Sbjct: 143 RGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDD 202
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL F +P R+ V W A + G Q ++ + LE+F M + G+ +S+ + +
Sbjct: 203 ALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M GR +H +K + S V A++D+Y K + +A F + + + N++
Sbjct: 263 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAM 322
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
M + G + LF M+ + + D+V+ S V AC+ G+Q+H + +G
Sbjct: 323 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 382
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
D+ D+ +NNA++D+Y KC ++ +A ++F M +KD SWN +I +G
Sbjct: 383 -------DV-DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTC 486
+ + F+ M +KPD+ T+ VL AC+ L G +++S G + +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--ST 492
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ----- 541
V+DM + G ++EA +L + + V W +L+ L+ ++ AQ+ F
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE----EAQKFFSEMLDM 547
Query: 542 -LEPGH 546
L+P H
Sbjct: 548 GLKPDH 553
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 192/402 (47%), Gaps = 14/402 (3%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G +P+ + CL++ + A VF D + ++ Y + A
Sbjct: 47 GFVPNAFVSNCLLQ----MYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+ +F+ +P DVV WNA+V+GY Q G F +++++F M++ G+ R T +L + +
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G VH + VK G + V +AL+DMYGK + + +AL F M E++ SW + +
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q + L LF M G ++++ +C+ ++ L GRQ+H + + N +
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFS 282
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
D + A++D+Y K S+ DA+ F + V + N M++G G G E
Sbjct: 283 S--------DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+ +F M + ++ D V+ GV SAC+ + QG++ + + + G I V+
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ-VHCLAIKSGFDVDICVNNAVL 393
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
D+ G+ L EAY + M + + V W ++AA +G+ D
Sbjct: 394 DLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNGHYD 434
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F + + CA +GQ++H +++G +++++Y KC + A +
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + +V ++NA+I+ N + FN M + G+ PD +T+ ++K C + +
Sbjct: 409 FQGMKQKDSV-SWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS 467
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +H V K GL D ++ S +V+ Y KC ++EA K+ + + + VV WNA+++G
Sbjct: 468 LEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSG 527
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
++ E +A + F M G+ FT VL + + G+ +HG ++K
Sbjct: 528 FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDD 587
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + L+DMY K + ++L +FE +E++D SWN+++ + G LR+F+RM
Sbjct: 588 EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQK 647
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
P+ TF VL ACSH+ G
Sbjct: 648 ENVVPNHATFVAVLRACSHVGLFDDG 673
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+V G+ V N L+ MY + A +F+ M +D SWN+++T + G+
Sbjct: 43 MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 321 LRLFD-------------------------------RMLSAGFQPDLVTFSTVLPACSHL 349
+ LFD M G PD TF+ +L +CS L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
L G Q+H V GL DV +AL+DMY KC S+ DA F M +++
Sbjct: 163 EELSLGVQVHALAVKTGLEI--------DVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-L 468
SW I G + Q L++F M L + ++ +C+ L+ GR+
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+++++ + T ++D+ +A L +A +PN
Sbjct: 275 HAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPN 313
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 211/592 (35%), Positives = 328/592 (55%), Gaps = 20/592 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C A+L CA L+ G+++HS +R G + LI MYS+C + A VF+ +
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
Query: 94 SCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
P+V Y ++IS F N +F ++Q G+ P+++T ++ C V+
Sbjct: 176 D-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQ-GLKPNEHTMTTILTACPRVLG--- 230
Query: 153 VKKIHG-LVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IHG L+ K+GL VY +AL++ Y + + A VF+ L ++VV W +M+ Y
Sbjct: 231 -QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ G +AL+VF M EG+ + F ++ VL A +G GR +H +K + +
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDI 346
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL+ MYG+ V E + +E D+ SW + ++ + Q G + + L +M S
Sbjct: 347 RVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 406
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF P+ FS+VL +C+ +A+L G Q H LA C ++ NAL++MY+
Sbjct: 407 GFTPNGYAFSSVLSSCADVASLDQGMQFHC------LALKLGCDS--EICTGNALINMYS 458
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG M A++ F M DV SWN +I G+ G +AL++FS M +KPD+ TF+G
Sbjct: 459 KCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLG 518
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL C+HSG + +G F LM +Y P HY C+IDMLGR G+ +EA + MP E
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ ++W+TLLA+ +LH N D+ ++AA R+ +L +YVLMSNIY G++E+ +R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
M + V+K+ GCSWIE+ + +HTF S D SHP + SIY L L A +++
Sbjct: 639 RRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 224/461 (48%), Gaps = 20/461 (4%)
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+N K ++ AL +F+ + NV + +++SG+ N L F M + GV P+
Sbjct: 55 LNRLVKSGRLADALDLFDRMP-RKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPN 113
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ + C D+ A+ +++H L + G D +IGS L+ Y +C + A +VF+
Sbjct: 114 DFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFD 173
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+ DVV + ++++ + + GEF A E +M K+G+ + T+T +L+A +
Sbjct: 174 RMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----L 229
Query: 254 GRVVHG-IVVKMGYDS-GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
G+ +HG ++ K+G S V ALID Y + A +F+ + K++ SW S+M ++
Sbjct: 230 GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLY 289
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G + L++F M+S G P+ S VL AC + GRQ+H + + L
Sbjct: 290 IRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDL---- 342
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
I D+ ++NAL+ MY + G + + + + K+ D+ SW I +G G++A+
Sbjct: 343 ----ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIA 398
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+ M P+ F VLS+C+ L QG +F + + G I +I+M
Sbjct: 399 LLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF-HCLALKLGCDSEICTGNALINMY 457
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ GQ+ A LA + + + W +L+ HG+ + A
Sbjct: 458 SKCGQMGSA-RLAFDVMHTHDVTSWNSLIHGHAQHGDANKA 497
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 179/360 (49%), Gaps = 15/360 (4%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV + +N +K + +AL +F+ +P ++VV W ++++GY + G AL +F M
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ + F L A +G + G VH + V+ G+ + + LI+MY + +
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLP 166
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A E+F+ M+ D+ + S+++ + G + +ML G +P+ T +T+L AC
Sbjct: 167 AAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACP 226
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ G+QIHGY++ ++ S V+ + AL+D Y++ G + A+ VF +
Sbjct: 227 RVL----GQQIHGYLIKKIGLRSQS------VYSSTALIDFYSRNGEFKLAKAVFDSLHC 276
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+V SW M+ Y DG+ +EAL +F M + P+E VL AC G + GR+
Sbjct: 277 KNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQ- 332
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L ++ ++ I ++ M GR G L E E L + V W T ++A+ +G
Sbjct: 333 LHCSAIKHDLITDIRVSNALLSMYGRTG-LVEELEAMLNKIENPDLVSWTTAISANFQNG 391
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 115/250 (46%), Gaps = 14/250 (5%)
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
A + C + DV + ++ K G + DA +F +M +K+V +W ++ GY +G+ +
Sbjct: 37 AADNGCAESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPE 96
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
AL MF+ M E+ + P++ L AC+ G L G + L R G +C+
Sbjct: 97 AALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLA-VRAGFAGDAWIGSCL 155
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPG 545
I+M R G L A E+ M + + V + +L++A +G +LA A ++ + L+P
Sbjct: 156 IEMYSRCGSLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPN 214
Query: 546 -HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
H +L + V G + L + +R Q+V + L F S +
Sbjct: 215 EHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSS---------TALIDFYSRNGEFK 265
Query: 605 EAKSIYAELH 614
AK+++ LH
Sbjct: 266 LAKAVFDSLH 275
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 321/590 (54%), Gaps = 13/590 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ + CA + L G+++H++ ++ + T+++++Y+K + A F L
Sbjct: 255 SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL--- 311
Query: 97 PN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
PN V T NAM+ G + + F M + + D + + C + + +
Sbjct: 312 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 371
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H L K G D+D+ + +A+++ Y KC+ + EA +F+ + +D V WNA++ Q G
Sbjct: 372 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 431
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ + F M + G+ FT VL A + + G +VH V+K G S V +
Sbjct: 432 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 491
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
++DMY K + EA ++ + + + + SWN+I++ + + F ML G +P
Sbjct: 492 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 551
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D TF+TVL C++LA + G+QIHG I+ + +DD ++++ L+DMY KCG
Sbjct: 552 DHFTFATVLDTCANLATIELGKQIHGQIIKQEM--------LDDEYISSTLVDMYAKCGD 603
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M D+ +VF K+ K+D SWN MI GY + G G EAL MF M + + P+ TFV VL A
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 663
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH G G + LM + Y + P +EH+ C++D+LGR+ EA + +MP +A+ V
Sbjct: 664 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 723
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W+TLL+ ++ + ++AE+AA V L+P Y+L+SN+Y GK+ +V R ++
Sbjct: 724 IWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLK 783
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
Q ++K PGCSWIE++ +H F+ D++HP + +Y L+ L ++ G
Sbjct: 784 QGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 833
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 257/495 (51%), Gaps = 23/495 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ L G ++H+ ++TG+ + ++L++MY KC + AL F + E N
Sbjct: 156 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERN 214
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A I+G N+ +GL+ F M++LG+ + ++ + C + + +++H
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP V NAM+ G + G +
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 334
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F+ M + I +++GV SA + G+ VH + +K G+D + V NA++D
Sbjct: 335 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 394
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+YGK K + EA IF+ M++KD SWN+I+ EQ G++D T+ F+ ML G +PD T
Sbjct: 395 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 454
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL AC+ L +L +G +H ++ +GL D F+ + ++DMY KCG + +A
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGS--------DAFVASTVVDMYCKCGIIDEA 506
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q + ++ + V SWN ++ G+ ++ + +EA FS M + LKPD TF VL C++
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ G++ +G + E + ++DM + G + ++ L + +
Sbjct: 567 ATIELGKQI-------HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL-LVFEKVEKRD 618
Query: 513 PVVWRTLLAASRLHG 527
V W ++ LHG
Sbjct: 619 FVSWNAMICGYALHG 633
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 243/486 (50%), Gaps = 23/486 (4%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ YS + A+ +F+ + +P+V ++NA++SG+ + +D F M +
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMP-DPDVVSWNALVSGYCQRGMFQESVDLFVEMAR 142
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV PD+ TF L+K C + + ++H L K GL++DV GSALV+ Y KC+ +++
Sbjct: 143 RGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDD 202
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL F +P R+ V W A + G Q ++ + LE+F M + G+ +S+ + +
Sbjct: 203 ALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M GR +H +K + S V A++D+Y K + +A F + + + N++
Sbjct: 263 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAM 322
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
M + G + LF M+ + + D+V+ S V AC+ G+Q+H + +G
Sbjct: 323 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 382
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
D+ D+ +NNA++D+Y KC ++ +A ++F M +KD SWN +I +G
Sbjct: 383 -------DV-DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTC 486
+ + F+ M +KPD+ T+ VL AC+ L G +++S G + +
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--ST 492
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ----- 541
V+DM + G ++EA +L + + V W +L+ L+ ++ AQ+ F
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE----EAQKFFSEMLDM 547
Query: 542 -LEPGH 546
L+P H
Sbjct: 548 GLKPDH 553
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 179/363 (49%), Gaps = 10/363 (2%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D + ++ Y + A+ +F+ +P DVV WNA+V+GY Q G F +++++F M+
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ R T +L + + G VH + VK G + V +AL+DMYGK + +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+AL F M E++ SW + + Q + L LF M G ++++ +C+
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
++ L GRQ+H + + N + D + A++D+Y K S+ DA+ F +
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSS--------DRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
V + N M++G G G EA+ +F M + ++ D V+ GV SAC+ + QG++
Sbjct: 314 HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ- 372
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + + G I V+D+ G+ L EAY + M + + V W ++AA +G
Sbjct: 373 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNG 431
Query: 528 NTD 530
+ D
Sbjct: 432 HYD 434
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F + + CA +GQ++H +++G +++++Y KC + A +
Sbjct: 349 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + +V ++NA+I+ N + FN M + G+ PD +T+ ++K C + +
Sbjct: 409 FQGMKQKDSV-SWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS 467
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +H V K GL D ++ S +V+ Y KC ++EA K+ + + + VV WNA+++G
Sbjct: 468 LEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSG 527
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
++ E +A + F M G+ FT VL + + G+ +HG ++K
Sbjct: 528 FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDD 587
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + L+DMY K + ++L +FE +E++D SWN+++ + G LR+F+RM
Sbjct: 588 EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQK 647
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
P+ TF VL ACSH+ G
Sbjct: 648 ENVVPNHATFVAVLRACSHVGLFDDG 673
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 42/270 (15%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------ 325
V N L+ MY + A +F+ M +D SWN+++T + G+ + LFD
Sbjct: 54 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113
Query: 326 -------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
M G PD TF+ +L +CS L L G Q+H
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
V GL DV +AL+DMY KC S+ DA F M +++ SW I G
Sbjct: 174 LAVKTGLEI--------DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 225
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVP 479
+ Q L++F M L + ++ +C+ L+ GR+ +++++
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ T ++D+ +A L +A +PN
Sbjct: 286 VVG--TAIVDVYAKANSLTDARRAFFGLPN 313
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 364 bits (934), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 343/646 (53%), Gaps = 68/646 (10%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C ++ G EIH +++ G +L+N Y +C ++ A VF+ + P
Sbjct: 680 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP-NP 738
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+N I ++ KG++ F M+ + + T +++ C + A+ K+IH
Sbjct: 739 EALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIH 798
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G VF+ GLD DV + + L++ Y K +E A +VF+ + R+ WN+M++ YA +G +
Sbjct: 799 GYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 858
Query: 218 KA-----------------------------------LEVFRRMSKEGIWMSRFTVTGVL 242
A L + +RM EG + ++T VL
Sbjct: 859 DAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVL 918
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A+ +GF G+ HG V++ G+D V V +LIDMY K + A +F+ M+ ++IF
Sbjct: 919 QAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIF 978
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF----------------------- 339
+WNS+++ + G + LRL ++M G +PDLVT+
Sbjct: 979 AWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSAS 1038
Query: 340 -STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +L AC+ L+ L G++IH + NG I+DVF+ AL+DMY+K S+++A
Sbjct: 1039 ITCLLRACASLSLLQKGKEIHCLSIRNGF--------IEDVFVATALIDMYSKSSSLKNA 1090
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF ++ K +ASWN MI+G+ + G GKEA+ +F+ M + + PD +TF +LSAC +S
Sbjct: 1091 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNS 1150
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G ++ M + Y +VP +EHY C++D+LGRAG L+EA++L MP + + +W
Sbjct: 1151 GLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGA 1210
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL + R+H N AE AA+ +F+LEP + NY+LM N+Y ++E++ +R M V
Sbjct: 1211 LLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGV 1270
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R SWI++ +H F S ++ HP+A IY EL+ L + +++ G
Sbjct: 1271 RNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLG 1316
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 220/474 (46%), Gaps = 69/474 (14%)
Query: 98 NVFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N +N+ + F S+ + L+ F + GV+ D + +K C VM + +I
Sbjct: 637 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 696
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG + K G DLDVY+ AL+N Y +C +E+A +VF E+P + +LWN + Q +
Sbjct: 697 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 756
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
K +E+FR+M + T+ VL A MG + +HG V + G DS V + N L
Sbjct: 757 QKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 816
Query: 277 IDMYGKGKCVGEALEIFEMMEEK-----------------------------------DI 301
I MY K + A +F+ ME + DI
Sbjct: 817 ISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDI 876
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
+WN +++ H G + L + RM GF+P+ + ++VL A S L L G++ HGY
Sbjct: 877 VTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGY 936
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ NG C DV++ +L+DMY K S+ AQ VF M +++ +WN ++ GY
Sbjct: 937 VLRNGF----DC----DVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYS 988
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS------------------------ACSH 457
G ++AL + + M + +KPD VT+ G++S AC+
Sbjct: 989 FKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACAS 1048
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L +G+E + + R G + + T +IDM ++ L A+++ + N+
Sbjct: 1049 LSLLQKGKE-IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 1101
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 176/382 (46%), Gaps = 60/382 (15%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFN 91
AT + LQ C L ++IH Y+ R G +DS +S+ LI+MYSK +++ A VF+
Sbjct: 776 ATIVRVLQACGKMGALNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNGKLELARRVFD 834
Query: 92 NLS----------------------------------CEPNVFTYNAMISGFYSNDFAFK 117
++ +P++ T+N ++SG + + + +
Sbjct: 835 SMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEE 894
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L+ M+ G P+ + +++ ++ + K+ HG V + G D DVY+G++L++
Sbjct: 895 VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID 954
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y+K + A VF+ + R++ WN++V+GY+ G F AL + +M KEGI T
Sbjct: 955 MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014
Query: 238 VTGVLSALIMMG------------------------FFKNGRVVHGIVVKMGYDSGVPVM 273
G++S M G + G+ +H + ++ G+ V V
Sbjct: 1015 WNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVA 1074
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALIDMY K + A ++F ++ K + SWN ++ G + +F+ M G
Sbjct: 1075 TALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG 1134
Query: 334 PDLVTFSTVLPACSHLAALMHG 355
PD +TF+ +L AC + + G
Sbjct: 1135 PDAITFTALLSACKNSGLIGEG 1156
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 152/330 (46%), Gaps = 12/330 (3%)
Query: 175 LVNTYLKC-QFMEEALKVFEELPLRDVVLWNAMVNGY-AQIGEFHKALEVFRRMSKEGIW 232
L+++YL F A+ + LP R+ + WN+ V + + G H LEVF+ + +G+
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLP-RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ L + G +HG ++K G+D V + AL++ YG+ + +A ++
Sbjct: 672 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M + WN + ++ Q + LF +M + + + T VL AC + AL
Sbjct: 732 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
+QIHGY+ GL DV + N L+ MY+K G + A+ VF M ++ +S
Sbjct: 792 NAAKQIHGYVFRFGLD--------SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSS 843
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN MI Y G +A +F + + +KPD VT+ +LS G+ + L M+
Sbjct: 844 WNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQ 903
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
G P T V+ + G LN E
Sbjct: 904 GE-GFKPNSSSMTSVLQAISELGFLNMGKE 932
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 9/178 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC+ L+ CA + LQKG+EIH +R G I+ T+LI+MYSK +K A VF +
Sbjct: 1040 TCL--LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRI 1097
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + ++N MI GF + + FN M+++GV PD TF L+ C + + E
Sbjct: 1098 QNK-TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 1156
Query: 154 KKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
K + +++ L+ Y +V+ + +++EA + +PL+ D +W A++
Sbjct: 1157 WKYFDSMITDYRIVPRLEHY--CCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 321/590 (54%), Gaps = 13/590 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ + CA + L G+++H++ ++ + T+++++Y+K + A F L
Sbjct: 297 SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL--- 353
Query: 97 PN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
PN V T NAM+ G + + F M + + D + + C + + +
Sbjct: 354 PNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQ 413
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H L K G D+D+ + +A+++ Y KC+ + EA +F+ + +D V WNA++ Q G
Sbjct: 414 QVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNG 473
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ + F M + G+ FT VL A + + G +VH V+K G S V +
Sbjct: 474 HYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAS 533
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
++DMY K + EA ++ + + + + SWN+I++ + + F ML G +P
Sbjct: 534 TVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKP 593
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D TF+TVL C++LA + G+QIHG I+ + +DD ++++ L+DMY KCG
Sbjct: 594 DHFTFATVLDTCANLATIELGKQIHGQIIKQEM--------LDDEYISSTLVDMYAKCGD 645
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M D+ +VF K+ K+D SWN MI GY + G G EAL MF M + + P+ TFV VL A
Sbjct: 646 MPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRA 705
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH G G + LM + Y + P +EH+ C++D+LGR+ EA + +MP +A+ V
Sbjct: 706 CSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAV 765
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W+TLL+ ++ + ++AE+AA V L+P Y+L+SN+Y GK+ +V R ++
Sbjct: 766 IWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLK 825
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
Q ++K PGCSWIE++ +H F+ D++HP + +Y L+ L ++ G
Sbjct: 826 QGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 875
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 257/495 (51%), Gaps = 23/495 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ L G ++H+ ++TG+ + ++L++MY KC + AL F + E N
Sbjct: 198 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERN 256
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A I+G N+ +GL+ F M++LG+ + ++ + C + + +++H
Sbjct: 257 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 316
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP V NAM+ G + G +
Sbjct: 317 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIE 376
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F+ M + I +++GV SA + G+ VH + +K G+D + V NA++D
Sbjct: 377 AMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLD 436
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+YGK K + EA IF+ M++KD SWN+I+ EQ G++D T+ F+ ML G +PD T
Sbjct: 437 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFT 496
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +VL AC+ L +L +G +H ++ +GL D F+ + ++DMY KCG + +A
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVIKSGLGS--------DAFVASTVVDMYCKCGIIDEA 548
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q + ++ + V SWN ++ G+ ++ + +EA FS M + LKPD TF VL C++
Sbjct: 549 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 608
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ G++ +G + E + ++DM + G + ++ L + +
Sbjct: 609 ATIELGKQI-------HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSL-LVFEKVEKRD 660
Query: 513 PVVWRTLLAASRLHG 527
V W ++ LHG
Sbjct: 661 FVSWNAMICGYALHG 675
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 243/486 (50%), Gaps = 23/486 (4%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ YS + A+ +F+ + +P+V ++NA++SG+ + +D F M +
Sbjct: 126 VSWNTMLTAYSHAGDISTAVALFDGMP-DPDVVSWNALVSGYCQRGMFQESVDLFVEMAR 184
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV PD+ TF L+K C + + ++H L K GL++DV GSALV+ Y KC+ +++
Sbjct: 185 RGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDD 244
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL F +P R+ V W A + G Q ++ + LE+F M + G+ +S+ + +
Sbjct: 245 ALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 304
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M GR +H +K + S V A++D+Y K + +A F + + + N++
Sbjct: 305 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAM 364
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
M + G + LF M+ + + D+V+ S V AC+ G+Q+H + +G
Sbjct: 365 MVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGF 424
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
D+ D+ +NNA++D+Y KC ++ +A ++F M +KD SWN +I +G
Sbjct: 425 -------DV-DICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTC 486
+ + F+ M +KPD+ T+ VL AC+ L G +++S G + +
Sbjct: 477 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVA--ST 534
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ----- 541
V+DM + G ++EA +L + + V W +L+ L+ ++ AQ+ F
Sbjct: 535 VVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESE----EAQKFFSEMLDM 589
Query: 542 -LEPGH 546
L+P H
Sbjct: 590 GLKPDH 595
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 179/363 (49%), Gaps = 10/363 (2%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D + ++ Y + A+ +F+ +P DVV WNA+V+GY Q G F +++++F M+
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ R T +L + + G VH + VK G + V +AL+DMYGK + +
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+AL F M E++ SW + + Q + L LF M G ++++ +C+
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
++ L GRQ+H + + N + D + A++D+Y K S+ DA+ F +
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSS--------DRVVGTAIVDVYAKANSLTDARRAFFGLPN 355
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
V + N M++G G G EA+ +F M + ++ D V+ GV SAC+ + QG++
Sbjct: 356 HTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQ- 414
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + + G I V+D+ G+ L EAY + M + + V W ++AA +G
Sbjct: 415 VHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNG 473
Query: 528 NTD 530
+ D
Sbjct: 474 HYD 476
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 163/326 (50%), Gaps = 1/326 (0%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F + + CA +GQ++H +++G +++++Y KC + A +
Sbjct: 391 FDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + +V ++NA+I+ N + FN M + G+ PD +T+ ++K C + +
Sbjct: 451 FQGMKQKDSV-SWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRS 509
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +H V K GL D ++ S +V+ Y KC ++EA K+ + + + VV WNA+++G
Sbjct: 510 LEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSG 569
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
++ E +A + F M G+ FT VL + + G+ +HG ++K
Sbjct: 570 FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDD 629
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + L+DMY K + ++L +FE +E++D SWN+++ + G LR+F+RM
Sbjct: 630 EYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQK 689
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
P+ TF VL ACSH+ G
Sbjct: 690 ENVVPNHATFVAVLRACSHVGLFDDG 715
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 42/270 (15%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------ 325
V N L+ MY + A +F+ M +D SWN+++T + G+ + LFD
Sbjct: 96 VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155
Query: 326 -------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
M G PD TF+ +L +CS L L G Q+H
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 215
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
V GL DV +AL+DMY KC S+ DA F M +++ SW I G
Sbjct: 216 LAVKTGLEI--------DVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGC 267
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVP 479
+ Q L++F M L + ++ +C+ L+ GR+ +++++
Sbjct: 268 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 327
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ T ++D+ +A L +A +PN
Sbjct: 328 VVG--TAIVDVYAKANSLTDARRAFFGLPN 355
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 184/488 (37%), Positives = 283/488 (57%), Gaps = 27/488 (5%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY--LKCQFM-------- 185
+ P +K C + +H L + G D + +AL+N Y L C ++
Sbjct: 53 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSV 112
Query: 186 ---------EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
E KVF+E+ RDVV WN +V G A+ G H+AL + R+M +EG F
Sbjct: 113 GGTGSSTALESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSF 172
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T++ VL K G VHG V+ G+D+ V V ++LIDMY ++++F+ +
Sbjct: 173 TLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNL 232
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D WNS++ Q G+ + L +F RML G +P VTFS+++P C +LA+L G+
Sbjct: 233 PVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGK 292
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H Y++ G D+VF++++L+DMY KCG + A +F +M DV SW M
Sbjct: 293 QLHAYVIRGGFE--------DNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAM 344
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I+GY + G +EAL +F M KP+ +TF+ VL+ACSH+G + +G ++ M YG
Sbjct: 345 IMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYG 404
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
+VPT+EH + D+LGRAG+L+EAY M + VW TLL A R+H NT LAE A
Sbjct: 405 IVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVA 464
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+++ +LEP G++V++SN+Y A G++ E +R +MR++ ++K+P CSWIE+K+ LH F
Sbjct: 465 KKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDPACSWIEVKNKLHVF 524
Query: 597 ISSDRSHP 604
++ DRSHP
Sbjct: 525 VAHDRSHP 532
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 36/409 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK------------- 79
A+ A+L+ CA G +H+ +R+G + +L+N+Y K
Sbjct: 52 ASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTS 111
Query: 80 ------CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
++ VF+ + E +V ++N ++ G + L M + G PD
Sbjct: 112 VGGTGSSTALESVRKVFDEM-IERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPD 170
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+T ++ + V ++HG + G D DV++GS+L++ Y C + ++KVF+
Sbjct: 171 SFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFD 230
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
LP+RD +LWN+++ G AQ G +AL +FRRM + G+ T + ++ + +
Sbjct: 231 NLPVRDPILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRF 290
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H V++ G++ V + ++LIDMY K + A IF+ M D+ SW +++ +
Sbjct: 291 GKQLHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYAL 350
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G L LF+RM +P+ +TF VL ACSH +V G S
Sbjct: 351 HGPAREALVLFERMELGNAKPNHITFLAVLTACSHAG-----------LVDKGWKYFKSM 399
Query: 374 KD----IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
D + + AL D+ + G + +A +KM K AS W+ ++
Sbjct: 400 SDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLL 448
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 331/611 (54%), Gaps = 19/611 (3%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
N S +S Q +P +L LQ C +LQ ++H+++L+T + P+ +++
Sbjct: 10 NISLTSITQFPENPKSLI-----LQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLE 61
Query: 76 MYSKCC--QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ + YAL +FN++ +P YN MI G L F M + V D
Sbjct: 62 SAALLLPDTIDYALSIFNHID-KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHD 120
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K+TF ++K C + A+ E +++H L+ K G + ++ + L+ Y C + A VF+
Sbjct: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P R +V WN+M++GY + G + + +++FR++ + I T+ VL A + +
Sbjct: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G ++ +V G + +LIDMY K V A ++F+ M+++D+ +W+++++ + Q
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQ 300
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
L LF M P+ VT +VL +C+ L A G+ +H YI +
Sbjct: 301 ADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLT--- 357
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
V + L+D Y KCG + + VF +MS K+V +W +I G +G+GK AL+ F
Sbjct: 358 -----VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFF 412
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S M E +KP++VTF+GVLSACSH+ + QGR M + + P IEHY C++D+LGR
Sbjct: 413 SSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGR 472
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AG L EAY+ MP N VVWRTLLA+ R H N ++AE + + + +LEP H G+Y+L+
Sbjct: 473 AGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILL 532
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
SN Y G+ E+ + +R ++++ ++K PGCS IEL +H F S D H +K I+ L
Sbjct: 533 SNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDAL 592
Query: 614 HSLTARLREHG 624
+ +++ G
Sbjct: 593 DKMMKQIKRLG 603
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 307/558 (55%), Gaps = 51/558 (9%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLI---NMYSKCCQMKYALFVFNNLSCEPNVFTY 102
T++ + + H+++L++G+I S + + LI + S + YA +F+ + PN + +
Sbjct: 18 TSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP-NPNSYMW 76
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
N +I + ++ L F+ M VLPDKYTF +K C V E ++IHG V K
Sbjct: 77 NTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLK 136
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
GL D++I + L++ Y C +E+A + + + RDVV WNA+++ YA+ G A +
Sbjct: 137 TGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHL 196
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F M++ + F ++G + +G + R V G PV
Sbjct: 197 FDEMTERNVESWNFMISGYVG----VGLLEEARRVFG---------ETPV---------- 233
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K++ SWN+++T + G L LF+ M AG +PD T +V
Sbjct: 234 ----------------KNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSV 277
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+H+ AL G +H YI NG++ +G F+ AL+DMY+KCGS+ A VF
Sbjct: 278 LSACAHVGALSQGEWVHAYIDKNGISIDG--------FVATALVDMYSKCGSIEKALEVF 329
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+KD+++WN +I G G G+ AL +FS M KP+EVTFV VLSACS +G L
Sbjct: 330 NSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLD 389
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+GRE LM +G+ PTIEHY C++D+LGR G L EA EL MP + VVW +LL A
Sbjct: 390 EGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGA 449
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R HGN +LAE AQ++ +L P ++V +SN+Y + G++++V+++R MR Q VRK+P
Sbjct: 450 CRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDP 509
Query: 583 GCSWIELKDGLHTFISSD 600
GCS IE+ ++ F++ +
Sbjct: 510 GCSMIEVDGTVYEFLAGE 527
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/631 (32%), Positives = 328/631 (51%), Gaps = 81/631 (12%)
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
P++ TSL+ Y+ ++ A+ F+ + + +NA+IS + A + F +
Sbjct: 88 PVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSL 147
Query: 126 RQLGVL-PDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
G L PD Y+F L+ + ++V ++ V K G + + +ALV Y+KC
Sbjct: 148 LASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKC 207
Query: 183 QFME---EALKVFEELPLRDV-------------------------------VLWNAMVN 208
+ +E +A KV +E+P +D V+WNAM++
Sbjct: 208 EALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMIS 267
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--- 265
GY G +A E+FRRM E + + FT T VLSA GFF +G+ VHG + ++
Sbjct: 268 GYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNF 327
Query: 266 -YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQC-------- 314
++ +PV NAL+ +Y K + A IF+ M+ KD+ SWN+I++ V C
Sbjct: 328 VPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 315 ---------------------GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
G + L+LF+RM + +P T++ + AC L +L
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLK 447
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
HG+Q+HG++V G + S NAL+ MY +CG++++A ++F M D SW
Sbjct: 448 HGKQLHGHLVQLGFEGSNSA--------GNALITMYARCGAVKEANLMFLVMPNIDSVSW 499
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI G G G+EAL++F M + PD ++F+ VL+AC+HSG + +G ++ M+
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKR 559
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G++P +HYT +ID+LGRAG++ EA +L MP E P +W +L+ R G+ +L
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
AA ++F++ P H G Y+L+SN Y A G++ + +R MR + V+K PGCSWIE + +
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F+ D HPEA +Y L + AR+R+ G
Sbjct: 680 HVFVVGDTKHPEAHKVYKFLEMVGARMRKLG 710
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ C +L+ G+++H ++++ G S + +LI MY++C +K A +F +
Sbjct: 432 TYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVM 491
Query: 94 SCEPNV--FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
PN+ ++NAMIS + + L+ F+ M G+ PD+ +F ++ C V
Sbjct: 492 ---PNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVD 548
Query: 152 EVKKIHGLVF--KLGLDLDVYIG----SALVNTYLKCQFMEEALKVFEELPLRDVV-LWN 204
E G + + D + G + L++ + + EA + + +P +W
Sbjct: 549 E-----GFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWE 603
Query: 205 AMVNGYAQIGEF----HKALEVFR 224
A+++G G+ H A ++F+
Sbjct: 604 AILSGCRTSGDMELGAHAADQLFK 627
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 199/588 (33%), Positives = 323/588 (54%), Gaps = 13/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G++IH+++LR G + LI+ Y KC +++ A +F+ + N
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMP-NKN 314
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ ++SG+ N + ++ F M + G+ PD + ++ C + A+ ++H
Sbjct: 315 IISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHA 374
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG---E 215
K L D Y+ ++L++ Y KC + EA KVF+ DVVL+NAM+ GY+++G E
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWE 434
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
H AL +F M I S T +L A + + +HG++ K G + + +A
Sbjct: 435 LHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSA 494
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI +Y C+ ++ +F+ M+ KD+ WNS+ + + Q ++ L LF + + +PD
Sbjct: 495 LIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPD 554
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF ++ A +LA+L G++ H ++ GL N ++ NAL+DMY KCGS
Sbjct: 555 EFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNP--------YITNALLDMYAKCGSP 606
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
DA F + +DV WN +I Y G+G++AL M M ++P+ +TFVGVLSAC
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + G + LM R+G+ P EHY C++ +LGRAG+LNEA EL MP + +V
Sbjct: 667 SHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIV 725
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
WR+LL+ GN +LAE AA+ +P G++ L+SNIY + G + + +R M+
Sbjct: 726 WRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKF 785
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ V K PG SWIE+ +H F+S D+SH +A IY L L ++R H
Sbjct: 786 EGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGH 833
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 227/444 (51%), Gaps = 25/444 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQL A L +H ++ +G+ +D+ LS L+N+YS+ M YA VF + E
Sbjct: 51 LQLRALDDPLLYHNVVHGQIIVSGLELDTYLS-NILMNLYSRAGGMVYARKVFEKMP-ER 108
Query: 98 NVFTYNAMIS-----GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC--DVMAV 150
N+ T++ M+S GFY F + R P++Y I+ C D
Sbjct: 109 NLVTWSTMVSACNHHGFYEESLVV----FLDFWRTRKNSPNEYILSSFIQACSGLDGSGR 164
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
V ++ + K D DVY+G+ L++ YLK ++ A VF+ LP + V W M++G
Sbjct: 165 WMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++G + +L++F ++ + + + ++ VLSA ++ F + G+ +H +++ G++
Sbjct: 225 VKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDA 284
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+MN LID Y K V A ++F+ M K+I SW ++++ ++Q H + LF M
Sbjct: 285 SLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKF 344
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +PD+ S++L +C+ L AL G Q+H Y + L +D ++ N+L+DMY
Sbjct: 345 GLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLG--------NDSYVTNSLIDMYA 396
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGY---GMDGQGKEALDMFSCMCEAKLKPDEVT 447
KC + +A+ VF + DV +N MI GY G + +AL++F M ++P +T
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLT 456
Query: 448 FVGVLSACSHSGFLSQGREFLPLM 471
FV +L A + L ++ LM
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLM 480
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 200/390 (51%), Gaps = 13/390 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C + L CA L+ G ++H+Y ++ + + SLI+MY+KC + A VF+
Sbjct: 352 ACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIF 411
Query: 94 SCEPNVFTYNAMISGFYSNDFAFK---GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +V +NAMI G+ ++ L+ F+ MR + P TF L++ + ++
Sbjct: 412 AAD-DVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSL 470
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K+IHGL+FK GL+LD++ GSAL+ Y C ++++ VF+E+ ++D+V+WN+M +GY
Sbjct: 471 GLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGY 530
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q E +AL +F + FT +++A + + G+ H ++K G +
Sbjct: 531 VQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNP 590
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ NAL+DMY K +A + F+ +D+ WNS+++ + G L++ ++M+
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCE 650
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P+ +TF VL ACSH + G + ++ G+ + ++ +
Sbjct: 651 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP--------ETEHYVCMVSLLG 702
Query: 391 KCGSMRDAQMVFTKMSKKDVA-SWNIMILG 419
+ G + +A+ + KM K A W ++ G
Sbjct: 703 RAGRLNEARELIEKMPTKPAAIVWRSLLSG 732
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 150/287 (52%), Gaps = 2/287 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+L T ++ L+ A T+L ++IH M + G+ + ++LI +YS C +K + VF
Sbjct: 453 SLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVF 512
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + + ++ +N+M SG+ + L+ F ++ PD++TF ++ ++ ++
Sbjct: 513 DEMKVK-DLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASL 571
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++ H + K GL+ + YI +AL++ Y KC E+A K F+ RDVV WN++++ Y
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSY 631
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A GE KAL++ +M EGI + T GVLSA G ++G ++++ G +
Sbjct: 632 ANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPET 691
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKD-IFSWNSIMTVHEQCGN 316
++ + G+ + EA E+ E M K W S+++ + GN
Sbjct: 692 EHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TF T A +ASLQL GQE H +L+ G+ +P +L++MY+KC +
Sbjct: 557 TFVDMVTAAGNLASLQL---------GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A F++ + +V +N++IS + ++ K L M G+ P+ TF ++ C
Sbjct: 608 DAHKAFDS-AASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLW 203
V + K L+ + G++ + +V+ + + EA ++ E++P + ++W
Sbjct: 667 SHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVW 726
Query: 204 NAMVNGYAQIGEFHKA 219
++++G A+ G A
Sbjct: 727 RSLLSGCAKAGNVELA 742
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 337/594 (56%), Gaps = 18/594 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L++ A L G+++H+++++ G + ++++Y KC + +F+ + +
Sbjct: 79 ALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLK- 137
Query: 98 NVFTYNAMISGFYSNDFAFK----GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV ++N +I G + F G +F M + P+ T L++ ++ V
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + K G D + ++GSALV++Y K ++EA F+E+ RD+VLWN MV+ YA
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G KA VF+ M EG+ FT T ++++ ++G G+ VHG+++++ +D V V
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K + + +A + F+ M K+I SW +++ + Q G+ +RL M+
Sbjct: 318 SALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTY 377
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN--NALMDMYTK 391
PD + +++L +C +L+A Q+H Y+V NG + F++ NAL+ Y+K
Sbjct: 378 PDELALASILSSCGNLSATSEVVQVHAYVVENGF----------EAFLSIANALVSAYSK 427
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ A F+ +++ D+ SW ++ Y G KE +++F M + ++PD+V F+GV
Sbjct: 428 CGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGV 487
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSAC+H GF+ +G + LM + Y ++P EHYTC+ID+LGRAG L+EA L +MP E
Sbjct: 488 LSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEP 547
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
L A ++H N LA A++++F +EP NY LMSN+Y + G + +V +R
Sbjct: 548 RSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRK 607
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
MR++ K PGCSW+E+ +HTF+S D++HP A +Y L L RL E D
Sbjct: 608 LMRERCDFKVPGCSWMEIAGEVHTFVSRDKTHPRAVQVYGML-DLLVRLMEEDD 660
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 309/530 (58%), Gaps = 9/530 (1%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ N+ ++ AMISG N + + F MR G +P ++ F I+ C + ++ K+
Sbjct: 3 QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H L K G+ ++++GS L + Y KC M +A KVFEE+P +D V W AM++GY++IGE
Sbjct: 63 MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
F +AL F++M E + + + + L A + K GR VH VVK+G++S + V NA
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182
Query: 276 LIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
L DMY K + A +F + E +++ S+ ++ + + + L +F + G +P
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEP 242
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ TFS+++ AC++ AAL G Q+H ++ +D F+++ L+DMY KCG
Sbjct: 243 NEFTFSSLIKACANQAALEQGTQLHAQVMKINFD--------EDPFVSSILVDMYGKCGL 294
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A F ++ +WN ++ +G G GK+A+ +F M + +KP+ +TF+ +L+
Sbjct: 295 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 354
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH+G + +G ++ M+ YGVVP EHY+CVID+LGRAG+L EA E MP E N
Sbjct: 355 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
W + L A R+HG+ ++ ++AA+++ +LEP + G VL+SNIY ++E+V +R MR
Sbjct: 415 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 474
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
NV+K PG SW+++ H F + D SHP +IY +L +L +++ G
Sbjct: 475 DGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 524
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 202/411 (49%), Gaps = 21/411 (5%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
M+S +S+ + FS T G + T ++++ CA +++ G+++H L+
Sbjct: 12 MISGLSQNSKFSEAIR--TFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK 69
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
GI ++L +MYSKC M A VF + C+ V ++ AMI G+ + L
Sbjct: 70 FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV-SWTAMIDGYSKIGEFEEALL 128
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F M V D++ + C + A + +H V KLG + D+++G+AL + Y
Sbjct: 129 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYS 188
Query: 181 KCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
K ME A VF + R+VV + +++GY + + K L VF + ++GI + FT +
Sbjct: 189 KAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFS 248
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
++ A + G +H V+K+ +D V + L+DMYGK + +A++ F+ + +
Sbjct: 249 SLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDP 308
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI- 358
+WNS+++V Q G +++F+RM+ G +P+ +TF ++L CSH + G
Sbjct: 309 TEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF 368
Query: 359 ----HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
Y VV G ++ SC ++D+ + G +++A+ +M
Sbjct: 369 YSMDKTYGVVPG-EEHYSC-----------VIDLLGRAGRLKEAKEFINRM 407
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 166/335 (49%), Gaps = 13/335 (3%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R++V W AM++G +Q +F +A+ F M G ++F + + A +G + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +H + +K G S + V + L DMY K + +A ++FE M KD SW +++ + +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L F +M+ D + L AC L A GR +H +V G
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES----- 175
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMF 433
D+F+ NAL DMY+K G M A VF S+ ++V S+ +I GY Q ++ L +F
Sbjct: 176 ---DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVF 232
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLG 492
+ ++P+E TF ++ AC++ L QG + +M+ + P + + ++DM G
Sbjct: 233 VELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS--SILVDMYG 290
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G L +A + A + + W +L++ HG
Sbjct: 291 KCGLLEQAIQ-AFDEIGDPTEIAWNSLVSVFGQHG 324
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 2/274 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L C + G+ +HS +++ G +L +MYSK M+ A VF S
Sbjct: 147 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 206
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV +Y +I G+ + KGL F +R+ G+ P+++TF LIK C + A+ + ++
Sbjct: 207 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQL 266
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K+ D D ++ S LV+ Y KC +E+A++ F+E+ + WN++V+ + Q G
Sbjct: 267 HAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLG 326
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNA 275
A+++F RM G+ + T +L+ G + G + + G G +
Sbjct: 327 KDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 386
Query: 276 LIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ID+ G+ + EA E M E + F W S +
Sbjct: 387 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 216/637 (33%), Positives = 333/637 (52%), Gaps = 58/637 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP- 97
L+ C +L+ G +H+ + G+ + S++ MY +C + A +F+ +
Sbjct: 134 LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI 193
Query: 98 -NVFTYNAMISGFYSNDFAFKGLDFFNHM---RQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ ++N++++ + + L M L + PD T ++ C V A+
Sbjct: 194 EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHG 253
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++HG + GL DV++G+ALV+ Y KC M EA KVFE + +DVV WNAMV GY+QI
Sbjct: 254 KQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313
Query: 214 GEFH-----------------------------------KALEVFRRMSKEGIWMSRFTV 238
G F +AL+VFR+M G+ + T+
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKM-------GYDSGVPVMNALIDMYGKGKCVGEALE 291
+LS +G G+ H V+K + + V+N LIDMY K K A
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 292 IFEMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLFDRMLS--AGFQPDLVTFSTVLPACS 347
IF+ +E KD + +W ++ + Q G + L+LF ++ +P+ T S L AC+
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L L GRQ+H Y + N +N S + +++ N L+DMY+K G + A+ VF M
Sbjct: 494 RLGELRLGRQLHAYALRN---ENES----EVLYVGNCLIDMYSKSGDIDAARAVFDNMKL 546
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++V SW ++ GYGM G+G+EAL +F M + D +TF+ VL ACSHSG + QG +
Sbjct: 547 RNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIY 606
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M +G+ P EHY C++D+LGRAG+LNEA EL M E VVW LL+ASR+H
Sbjct: 607 FHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHA 666
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N +L E AA ++ +L + G+Y L+SN+Y ++++V IR M+ +RK PGCSWI
Sbjct: 667 NIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWI 726
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ K TF DRSHPE++ IY L L R+++ G
Sbjct: 727 QGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMG 763
Score = 225 bits (573), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 248/505 (49%), Gaps = 48/505 (9%)
Query: 74 INMYSKCCQMKYALFVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
+ Y +C A+ + L VF +NA+I L F+ M++LG LP
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YTFP ++K C ++ ++ +H +V GL +V+I +++V Y +C +++A ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 193 EEL---PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR---FTVTGVLSALI 246
+E+ + D+V WN+++ Y Q G+ AL + RM R T+ +L A
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ ++G+ VHG V+ G V V NAL+ MY K + EA ++FE +++KD+ SWN+
Sbjct: 246 SVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSA-----------------------------------G 331
++T + Q G+ D L LF M G
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG 365
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P++VT +++L C+ + AL++G+Q H Y++ N L N + K+ DD+ + N L+DMY K
Sbjct: 366 LEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKE-DDLLVLNGLIDMYAK 424
Query: 392 CGSMRDAQMVFTKMSKKD--VASWNIMILGYGMDGQGKEALDMFSCMCEAK--LKPDEVT 447
C S R A+ +F + KD V +W +MI GY G+ +AL +F+ + + K LKP+ T
Sbjct: 425 CKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFT 484
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
L AC+ G L GR+ + C+IDM ++G ++ A + M
Sbjct: 485 LSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNM 544
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
N V W +L+ +HG + A
Sbjct: 545 KLR-NVVSWTSLMTGYGMHGRGEEA 568
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 203/429 (47%), Gaps = 63/429 (14%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA LQ G+++H + +R G++D +L++MY+KC +M A VF +
Sbjct: 236 TLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGI 295
Query: 94 S----------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
+ +V T++A+I+G+ F+ L
Sbjct: 296 KKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEAL 355
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL-------DVYIG 172
D F M+ G+ P+ T L+ C V A+L K+ H V K L+L D+ +
Sbjct: 356 DVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVL 415
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRD--VVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ L++ Y KC+ A +F+ + +D VV W M+ GYAQ GE + AL++F ++ K+
Sbjct: 416 NGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQK 475
Query: 231 IWM--SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP-VMNALIDMYGKGKCVG 287
+ + FT++ L A +G + GR +H ++ +S V V N LIDMY K +
Sbjct: 476 TSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDID 535
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F+ M+ +++ SW S+MT + G + L LFD+M GF D +TF VL ACS
Sbjct: 536 AARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACS 595
Query: 348 HLAALMHG-----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
H + G + G+ + G A++ +C ++D+ + G + +A +
Sbjct: 596 HSGMVDQGMIYFHDMVKGFGITPG-AEHYAC-----------MVDLLGRAGRLNEAMELI 643
Query: 403 TKMSKKDVA 411
MS + A
Sbjct: 644 KNMSMEPTA 652
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 201/578 (34%), Positives = 319/578 (55%), Gaps = 19/578 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
F + + +A+ C L++G+ +H +++ TG D PL T+L+ MY+KC + A
Sbjct: 11 FIVTSLVAA---CTKLQALEEGRRLHEHLIITGFRTDIPLE-TALLQMYAKCGSLDDAKR 66
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++F ++++IS + + + M GV P+ TF C + C V
Sbjct: 67 VFEGMEIK-DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVA 125
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + + IH + + D + +L+N YLKC M EA KVFE + R+V + AM++
Sbjct: 126 GLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMIS 185
Query: 209 GYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Y Q GE +ALE+F RMSK E I + +T +L A+ +G + GR VH + G+D
Sbjct: 186 AYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD 245
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V V NAL+ MYGK EA ++F+ M +++ SW S++ + Q GN L LF RM
Sbjct: 246 TNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM 305
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+P V+FS+ L AC+ L AL GR+IH +V LA M +L+
Sbjct: 306 ---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ---------METSLLS 353
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY +CGS+ DA+ VF +M +D S N MI + G+ K+AL ++ M + + D +T
Sbjct: 354 MYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGIT 413
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FV VL ACSH+ ++ R+F + +GVVP +EHY C++D+LGR+G+L +A EL M
Sbjct: 414 FVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETM 473
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + + V W TLL+ + HG+ + E AA++VF+L P YV +SN+Y A ++++
Sbjct: 474 PYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDAR 533
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+R M ++ V S+IE+ + LH F S R +
Sbjct: 534 RVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQ 571
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 200/377 (53%), Gaps = 14/377 (3%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G++ DK+ L+ C + A+ E +++H + G D+ + +AL+ Y KC
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+++A +VFE + ++D+ W+++++ YA+ G A+ ++RRM EG+ + T L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ +GR +H ++ + ++L++MY K + EA ++FE M+ +++ S+
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
++++ + Q G H L LF RM +P+ TF+T+L A L L GR++H ++
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
G N V + NAL+ MY KCGS +A+ VF M+ ++V SW MI Y
Sbjct: 241 SRGFDTN--------VVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQH 292
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +EAL++F M ++P V+F L+AC+ G L +GRE + + P +E
Sbjct: 293 GNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME- 348
Query: 484 YTCVIDMLGRAGQLNEA 500
T ++ M R G L++A
Sbjct: 349 -TSLLSMYARCGSLDDA 364
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/630 (33%), Positives = 347/630 (55%), Gaps = 24/630 (3%)
Query: 11 FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
FS S + T + T + + LQLC + + Q+ H+ +L G +
Sbjct: 7 FSFTLTTSRYYTSATVSLAHTPQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLA 66
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T L++ Y+ C ++ + FVF ++ + +V+ +N++I+G+ N + L F M + G+
Sbjct: 67 TRLVSAYATCGELATSRFVFESVEAK-SVYLWNSLINGYVKNHDFRQALALFREMGRNGM 125
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
LPD YT + K ++ ++ K IHG ++G DV +G++L++ Y +C +A+K
Sbjct: 126 LPDDYTLATVFKVFGELEDLVSGKLIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVK 185
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGE----FHKALE-VFRRMSKEGIWMSRFTVTGVLSAL 245
VF+E P R+V +N +++G A + H L F RM EG FTV +L
Sbjct: 186 VFDETPHRNVGSFNVVISGCAALENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVC 245
Query: 246 IM-MGFFKNGRVVHGIVVKMGYD----SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
G + GR +H VVK G D S V + ++LIDMY + K V +F+ M+ ++
Sbjct: 246 CGDTGKWDYGRELHCYVVKNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRN 305
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
++ W +++ + Q G D L L M + G +P+ V+ + LPAC LA L+ G+QIH
Sbjct: 306 VYVWTAMINGYVQNGAPDDALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIH 365
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMIL 418
G+ + L DDV + NAL+DMY+KCGS+ A+ F S KD +W+ MI
Sbjct: 366 GFSIKMELN--------DDVSLCNALIDMYSKCGSLDYARRAFETSSYFKDAITWSSMIS 417
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
YG+ G+G+EA+ + M + KPD +T VGVLSACS SG + +G + ++Y +
Sbjct: 418 AYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSKSGLVDEGISIYKSLMTKYEIK 477
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQR 538
PT+E CV+DMLGR+GQL++A E MP + P VW +LL AS +HGN+ ++A +
Sbjct: 478 PTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRH 537
Query: 539 VFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFIS 598
+ +LEP + NY+ +SN Y + +++ V ++R M+++ ++K PGCSWI + H+F
Sbjct: 538 LLELEPENPSNYISLSNTYASDRRWDVVTEVRTIMKERGLKKVPGCSWITISGKTHSFSV 597
Query: 599 SDRSHPEAKSIYAELHSLTARLREHGDCCA 628
+D++HP + IY L L + + D CA
Sbjct: 598 ADKAHPSSSLIYEMLGDLVSIMT---DGCA 624
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 311/573 (54%), Gaps = 40/573 (6%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S+I YSK +K AL +F + E + ++N MIS + F + L+ F M G
Sbjct: 185 SMIYGYSKYGSVKKALELFAKMP-ERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFR 243
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P+ T+ ++ C + + +H + ++ LDVY G L++ Y KC +E A +V
Sbjct: 244 PNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQV 303
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+ L + V W +++ G AQ G +AL +F +M + + +FT+ VL +
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK----------------------------- 282
G +H + G DS VPV NAL+ MY K
Sbjct: 364 SIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAF 423
Query: 283 --GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
V +A E F+ M E+++ SWNS++ + Q G + L+++ +ML G + D +TFS
Sbjct: 424 SQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFS 483
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T + AC+ LA L+ G QI G + N V + N+++ MY++CG + +AQ
Sbjct: 484 TSISACADLAVLILGNQILAQAEKLGFSSN--------VSVANSVVTMYSRCGQIEEAQK 535
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F+ + K++ SWN M+ GY +GQG++ +++F M PD++++V VLS CSHSGF
Sbjct: 536 MFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGF 595
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+S+G+ + M +G+ P EH+ C++D+LGRAGQL +A L MP + N +W LL
Sbjct: 596 VSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALL 655
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
AA R+HGNT LAE+A + + +L+ G+Y L++NIY GK + V ++R MR + VRK
Sbjct: 656 AACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRK 715
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
NPGCSWIE+ + +H F D +HP+ K ++ L
Sbjct: 716 NPGCSWIEVDNRVHVFTVDDTNHPQIKDVHRML 748
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 237/553 (42%), Gaps = 66/553 (11%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
S++ CA ++ +++H+ ++ G+ S L+NMYS C + A VF + P
Sbjct: 10 SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMF-P 68
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP---------DKYTFPCLIKCCCDVM 148
NV+++N MISGF + + F M + + IK +
Sbjct: 69 NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLG 128
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ ++HG K +D + +++++ Y+KC M+ A KVF P + WN+M+
Sbjct: 129 YLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIY 188
Query: 209 GYAQIGEFHKALEVFRRM---------------SKEG-----------IWMSRF-----T 237
GY++ G KALE+F +M S+ G +W F T
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
VLSA + + G +H +V+M V LIDMY K + A ++F+ +
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 308
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
E + SW S++ Q G + L LF++M D T +TVL C + G Q
Sbjct: 309 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ 368
Query: 358 IHGYIVVNGLAKN-----------GSCKD------------IDDVFMNNALMDMYTKCGS 394
+H + + GL + C D I D+ A++ +++ G
Sbjct: 369 LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGD 428
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ F KM +++V SWN M+ Y G +E L ++ M +K D +TF +SA
Sbjct: 429 VEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISA 488
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+ L G + L E + G + V+ M R GQ+ EA ++ ++ + N V
Sbjct: 489 CADLAVLILGNQILAQAE-KLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK-NLV 546
Query: 515 VWRTLLAASRLHG 527
W ++A +G
Sbjct: 547 SWNAMMAGYAQNG 559
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 222/490 (45%), Gaps = 63/490 (12%)
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+K C + ++ +K+H + +GL +++ + L+N Y C + +A +VF + +V
Sbjct: 11 MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGI--W---MSRFTVTGVLSALIM----MGFF 251
WN M++G+A G+ +A ++F +M + W MS + G L A I +G+
Sbjct: 71 YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLGYL 130
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMY------------------------------- 280
K +HG K + V +++DMY
Sbjct: 131 KLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGY 190
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K V +ALE+F M E+D SWN+++++ Q G TL F M + GF+P+ +T++
Sbjct: 191 SKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYA 250
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+VL AC+ + L G +H IV + DV+ L+DMY KCG + A+
Sbjct: 251 SVLSACTSIYDLEWGAHLHARIV--------RMEPCLDVYAGCGLIDMYAKCGRLESARQ 302
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF +++ + SW +I G G +EAL +F+ M E + D+ T VL C
Sbjct: 303 VFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKD 362
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL---NEAYELALAMPNEANPVVWR 517
+S G + +R G+ ++ ++ M + G + N A+EL MP + + W
Sbjct: 363 ISIGEQLHAHTITR-GLDSSVPVANALVTMYAKCGDVWKANHAFEL---MPIR-DIISWT 417
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
++ A G+ E A + ++ + ++ M Y+ G +EE L + M ++
Sbjct: 418 AMITAFSQAGDV---EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREG 474
Query: 578 VRKNPGCSWI 587
V+ + WI
Sbjct: 475 VKTD----WI 480
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 41/322 (12%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLAT L +C Q ++ G+++H++ + G+ S +L+ MY+KC + A
Sbjct: 348 FTLATV---LGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHA 404
Query: 90 FNNLSC------------------------------EPNVFTYNAMISGFYSNDFAFKGL 119
F + E NV ++N+M++ + + +GL
Sbjct: 405 FELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGL 464
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
+ M + GV D TF I C D+ ++ +I KLG +V + +++V Y
Sbjct: 465 KVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMY 524
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
+C +EEA K+F + ++++V WNAM+ GYAQ G+ K +E+F +M G + +
Sbjct: 525 SRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYV 584
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA----LIDMYGKGKCVGEALEIFEM 295
VLS GF G+ + M D G+ M+ ++D+ G+ + +A +
Sbjct: 585 SVLSGCSHSGFVSEGQYY---FLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQ 641
Query: 296 MEEK-DIFSWNSIMTVHEQCGN 316
M K + W +++ GN
Sbjct: 642 MPFKPNAAIWGALLAACRIHGN 663
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F + C+ L ++ R++H ++ GL + +F+ N L++MY+ CG + DA
Sbjct: 7 FYESMKECASLRSIPIARKLHAQLIFMGLKSS--------IFLQNHLLNMYSNCGLISDA 58
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF + +V SWN MI G+ GQ +EA +F M E D V++ ++S H+
Sbjct: 59 YRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHN 114
Query: 459 GFL------SQGREFLPLMESRYGVVPTIEH------YTCVIDMLGRAGQLNEAYELALA 506
G L S +L L +G + T V+DM + G ++ A ++
Sbjct: 115 GELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCR 174
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLA 532
PN + W +++ +G+ A
Sbjct: 175 TPNPS-LFCWNSMIYGYSKYGSVKKA 199
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/654 (31%), Positives = 331/654 (50%), Gaps = 81/654 (12%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEPNVFTY 102
H L + + R+ P++ TSL+ ++ +++ A F+ + + +
Sbjct: 71 HLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLH 130
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDV--MAVLEVKKIHGL 159
NAM+S F A + F+ + G L PD Y+F LI + +A ++H
Sbjct: 131 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 190
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFME---EALKVFEELPLRDV---------------- 200
V K G + + +AL+ Y+KC E +A KV +E+P +D
Sbjct: 191 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDV 250
Query: 201 ---------------VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
V+WNAM++GY Q G A E+FRRM E + + FT T VLSA
Sbjct: 251 NAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSAC 310
Query: 246 IMMGFFKNGRVVHGIVVKMGY----DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
GFF +G+ VHG ++++ ++ +PV NAL+ +Y KG + A IF+ M KD+
Sbjct: 311 ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV 370
Query: 302 FSWNSIMT--VHEQC-----------------------------GNHDGTLRLFDRMLSA 330
SWN+I++ + C G + L+LF++M +
Sbjct: 371 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 430
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+P T++ + AC L AL HGRQ+H ++V G + S NAL+ MY
Sbjct: 431 DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA--------GNALLTMYA 482
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG++ DA++VF M D SWN MI G G G+EAL++F M + PD ++F+
Sbjct: 483 KCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLT 542
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L+AC+H+G + +G + M+ +G+ P +HY +ID+LGR+G++ EA +L MP E
Sbjct: 543 ILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFE 602
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
P +W +L+ R +G+ + AA ++F++ P H G Y+L+SN Y A G++ + +R
Sbjct: 603 PTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVR 662
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + V+K PGCSWIE+ +H F+ D HPEA+ +Y L + AR+R+ G
Sbjct: 663 KLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 716
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 165/398 (41%), Gaps = 67/398 (16%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG---IIDSPLSIT-SLINMYSKCCQMK 84
P T + L CA+ G+ +H ++R + ++ L + +L+ +YSK ++
Sbjct: 297 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 356
Query: 85 YALFVFNNLSCEPNVFTYNAMISGF-----------------YSNDFAF----------- 116
A +F+ ++ + +V ++N ++SG+ Y ND ++
Sbjct: 357 IAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 415
Query: 117 ---KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L FN MR V P YT+ I C ++ A+ +++H + + G + G+
Sbjct: 416 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 475
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL+ Y KC + +A VF +P D V WNAM++ Q G +ALE+F +M EGI
Sbjct: 476 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 535
Query: 234 SRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
R + +L+A G G + G G LID+ G+ +GEA ++
Sbjct: 536 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 595
Query: 293 FEMME-EKDIFSWNSIMTVHEQCGN-----------------HDGTLRLFDRMLS-AGFQ 333
+ M E W +I++ G+ HDGT L S AG
Sbjct: 596 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 655
Query: 334 PDLVTFSTVL--------PACSHLAALMHGRQIHGYIV 363
D ++ P CS + G +IH ++V
Sbjct: 656 VDAARVRKLMRDRGVKKEPGCSWIEV---GSKIHVFLV 690
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/661 (31%), Positives = 351/661 (53%), Gaps = 48/661 (7%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
++S+ HP + + L C +L +G+++H +++ G P+ + L+ Y
Sbjct: 91 ASSASQDLIVHPIS-----SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 145
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
S + A + N S + F +N +IS + N F K L + M + G+ PD +T+
Sbjct: 146 SAFNLLVDAHVITEN-SNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTY 204
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
P ++K C + + + K++H + + + + +AL++ Y KC + A +F+++P
Sbjct: 205 PSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPE 264
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF---TVTG-------------V 241
RD V WN+M++ YA +G +++A E+F M E I ++ T+ G +
Sbjct: 265 RDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALEL 324
Query: 242 LS------------ALIM-------MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
LS ALI+ +G K G+ +H ++ + V NALI MY +
Sbjct: 325 LSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSR 384
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + A +F++ME K + +WNSI++ + L ML G +P+ VT ++V
Sbjct: 385 CKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASV 444
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LP C+ +A L HG++ H Y+ K D + + NAL+DMY + G + +A+ VF
Sbjct: 445 LPLCARVANLQHGKEFHCYMTRREDFK-------DHLLLWNALVDMYARSGKVLEARRVF 497
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ ++D ++ MI GYGM G+G+ AL +F M ++KPD +T + VLSACSHSG ++
Sbjct: 498 DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVT 557
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
QG+ M S YG+ P +EH+ C+ D+ GRAG LN+A E+ MP + P +W TL+ A
Sbjct: 558 QGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 617
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R+H NT++ E AA+++ +++P + G YVL++N+Y A G + ++ +R MR VRK P
Sbjct: 618 CRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAP 677
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFE 642
GC+W+++ G F+ D S+ A IY L LT ++E G + D T+ F
Sbjct: 678 GCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVMKEAGYISSEDFGSGDETSGEFN 737
Query: 643 K 643
+
Sbjct: 738 E 738
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 331/594 (55%), Gaps = 18/594 (3%)
Query: 32 LATCIASLQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
LAT S+ C H+ + S ++ +G+ ++ L+ +K + Y L +F
Sbjct: 4 LATLRHSILCCFHKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSATK--DLGYTLLLF 61
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L+ P +F +N ++ F ++ L ++ +R GV+PD++TFP L+K +
Sbjct: 62 DRLA-TPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNE 120
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + + K GLD D ++ ++LV+ + C +++ + ++F E +DVV W A++NG
Sbjct: 121 -NPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGC 179
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG---YD 267
+ G +ALE F M G+ + TV VL A M+ GR VHG V+ G +D
Sbjct: 180 LRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWD 239
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V +AL+DMY K +A+++F M +++ SW +++ + QC + L++F M
Sbjct: 240 --VYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEM 297
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G +P+ T ++ L AC+ L +L GR +H Y+ + L N + AL+D
Sbjct: 298 IIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSK--------LGTALVD 349
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+KCG + +A +VF K+ KDV W MI G M G +L++FS M ++++P+ VT
Sbjct: 350 MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVT 409
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVLSAC+H G + +G E LM Y + P ++HY C++D+LGRAG+L EA + +M
Sbjct: 410 FLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESM 469
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E P VW L + +H +L E + +L+P H G Y+L++N+Y K+E
Sbjct: 470 PMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++R M+ + V K+P CSWIE+ +H FI+ D+SH E+ ++Y L S+TA+L+
Sbjct: 530 NVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINVYMMLGSVTAQLK 583
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 326/579 (56%), Gaps = 10/579 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L+ Q+IH+ ++ +G+ + SL+N Y C + A +F++ C+ NV ++ +I
Sbjct: 36 DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK-NVVSWTILI 94
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
SG ND + +D F M P+ T ++ ++ + K +H + G +
Sbjct: 95 SGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+V++ +ALV+ Y K M A ++FE + R+VV WNA+V+GY+ G +A+++F M
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLM 214
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
++G+ + +T+ ++ A + +G + G +HG +++ GY++ + AL+D+Y CV
Sbjct: 215 RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPA 345
+A +F M KD+ +W ++T + D ++ F++ML + D + +L +
Sbjct: 275 DDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSS 334
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CSH AL GR++H + A N +F+ +A++DMY CG++ DA+ F M
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANN--------IFVGSAVIDMYANCGNLEDAKRFFYGM 386
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+KDV WN MI G GM+G G +A+D+F M + L PDE TFV VL ACSH+G + +G
Sbjct: 387 GEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGL 446
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M +P ++HY CVID+LGRAGQL+ AY MP + + V+ TLL A R+
Sbjct: 447 QIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRI 506
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN L +Q++F++EP G YVL+SN+Y G +E V R ++R + ++K+PG S
Sbjct: 507 HGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFS 566
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ ++TF++ ++ HP+ I L L ++++ G
Sbjct: 567 SIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAG 605
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+H LQ+G+ +H+ ++T ++ +++I+MY+ C ++ A F + E +
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKD 390
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
V +NAMI+G N + +D F M+ G+ PD+ TF ++ C V E
Sbjct: 391 VVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 333/557 (59%), Gaps = 13/557 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + ++ A +F+ + + +V + AMI+G+ S+++ + + F+ M + G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMP-DRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF-MEEAL 189
P+++T ++K C ++ + +HG+V KLG++ +Y+ +A++N Y C ME A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F ++ +++ V W ++ G+ +G+ L+++++M E ++ + +T + A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +H V+K G+ S +PVMN+++D+Y + + EA F ME+KD+ +WN++++
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
E+ + + L +F R S GF P+ TF++++ AC+++AAL G+Q+HG I G K
Sbjct: 288 ELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKE 428
N V + NAL+DMY KCG++ D+Q VF ++ ++++ SW M++GYG G G E
Sbjct: 347 N--------VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+++F M + ++PD + F+ VLSAC H+G + +G ++ +MES YG+ P + Y CV+
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL-AEIAAQRVFQLEPGHC 547
D+LGRAG++ EAYEL MP + + W +L A + H + L + +AA++V +L+P
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
G YV++S IY A GK+ + +R MR +K G SWI +++ + +F SD+ P A
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNAS 578
Query: 608 SIYAELHSLTARLREHG 624
S+Y+ L L RE G
Sbjct: 579 SVYSVLGLLIEETREAG 595
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 180/358 (50%), Gaps = 11/358 (3%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L+ +Y + +EEA +F+E+P RDVV W AM+ GYA +A E F M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ FT++ VL + M G +VHG+VVK+G + + V NA+++MY EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 291 -EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IF ++ K+ +W +++T G+ G L+++ +ML + + + A + +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ G+QIH ++ G N + + N+++D+Y +CG + +A+ F +M KD
Sbjct: 227 DSVTTGKQIHASVIKRGFQSN--------LPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+ +WN +I EAL MF P+ TF +++AC++ L+ G++
Sbjct: 279 LITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R G +E +IDM + G + ++ + + + N V W +++ HG
Sbjct: 338 RIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 201/407 (49%), Gaps = 17/407 (4%)
Query: 14 CFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
CF+ G T + FTL++ + S C + L G +H +++ G+ S ++
Sbjct: 98 CFHEMVKQG--TSPNEFTLSSVLKS---CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAM 152
Query: 74 INMYSKC-CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
+NMY+ C M+ A +F ++ + +V T+ +I+GF GL + M
Sbjct: 153 MNMYATCSVTMEAACLIFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEV 211
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
Y ++ + +V K+IH V K G ++ + +++++ Y +C ++ EA F
Sbjct: 212 TPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYF 271
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
E+ +D++ WN +++ + + +AL +F+R +G + +T T +++A +
Sbjct: 272 HEMEDKDLITWNTLISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALN 330
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVH 311
G+ +HG + + G++ V + NALIDMY K + ++ +F E+++ +++ SW S+M +
Sbjct: 331 CGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGY 390
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G + LFD+M+S+G +PD + F VL AC H + G + N +
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-----YFNVMESEY 445
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
D++ N ++D+ + G + +A + +M K D ++W ++
Sbjct: 446 GINPDRDIY--NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
++S++ R + + F + +T + +A+ CA+ L GQ++H + R
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAA---CANIAALNCGQQLHGRIFR 341
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G + +LI+MY+KC + + VF + N+ ++ +M+ G+ S+ + + ++
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTY 179
F+ M G+ PD+ F ++ C V + +K + + + G++ D I + +V+
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 180 LKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ + EA ++ E +P + D W A++
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAIL 490
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 328/632 (51%), Gaps = 82/632 (12%)
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
P++ TSL++ Y+ +++ + F+++ + +NAMIS F A + F +
Sbjct: 89 PVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSL 148
Query: 126 --RQLGVLPDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ PD Y+F L+ + +AV ++H V KLG + + +AL+ Y+K
Sbjct: 149 LASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMK 208
Query: 182 CQ---FMEEALKVFEELPLRDV-------------------------------VLWNAMV 207
C +A KV +E+P +D V+WNAM+
Sbjct: 209 CDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMI 268
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+GY Q G +A E+FRRM + I FT T +LSA GFF +G+ VHG +++ D
Sbjct: 269 SGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPD 328
Query: 268 ----SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT--- 320
+ +PV NAL+ +Y K + A +IF+ M KD+ SWN+I++ + + G D
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARI 388
Query: 321 ----------------------------LRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
L+LF++M S +P T++ + AC L AL
Sbjct: 389 FKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGAL 448
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
HG+Q+H ++V G + S NAL+ MY +CG+++DA++VF M D S
Sbjct: 449 KHGKQLHAHLVQCGFEASNSA--------GNALLTMYARCGAVKDARLVFLVMPNVDSVS 500
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN MI G G G+EAL++F M + PD ++F+ +L+AC+H+G + G ++ ME
Sbjct: 501 WNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME 560
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+G+ P +HY +ID+LGRAG++ EA +L MP E P +W +L+ R++G+ +L
Sbjct: 561 RDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELG 620
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
AA ++F++ P H G Y+L+SN Y A G++ + +R MR + V+K PGCSWIE+ +
Sbjct: 621 AYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNK 680
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+ D HP+A +Y L + A++R+ G
Sbjct: 681 VHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLG 712
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 157/360 (43%), Gaps = 63/360 (17%)
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLF 324
D G +L+ Y + ++ F+ + +D N++++ + + +F
Sbjct: 86 DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145
Query: 325 DRMLSA--GFQPDLVTFSTVLPACS--HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
+L++ +PD +F+++L A H A+ H Q+H V+ L
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLH--CAVHKLGAGAVLS------ 197
Query: 381 MNNALMDMYTKC---GSMRDAQMVFTKMSKKDVAS------------------------- 412
++NAL+ +Y KC G RDA+ V +M +KD +
Sbjct: 198 VSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEID 257
Query: 413 ------WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR- 465
WN MI GY G EA ++F M ++ PDE TF +LSAC+++GF G+
Sbjct: 258 GEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKS 317
Query: 466 ---EFLPLMESRYGVVP--TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+F+ L VP + ++ + ++G++ A ++ +M + V W T+L
Sbjct: 318 VHGQFIRLQPD---FVPEAALPVNNALVTLYSKSGKIAVATKIFDSM-TLKDVVSWNTIL 373
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCG-NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
+ G D A R+F+ P ++++M + YV GG E+ L + + MR ++V+
Sbjct: 374 SGYIESGCLD----NAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T A +A+ C L+ G+++H+++++ G S + +L+ MY++C +K A V
Sbjct: 433 YTYAGAVAA---CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLV 489
Query: 90 FNNLSCEPNV--FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
F + PNV ++NAMIS + + L+ F+ M G+ PD+ +F ++ C
Sbjct: 490 FLVM---PNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTAC 543
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 200/600 (33%), Positives = 326/600 (54%), Gaps = 15/600 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS+ + T F L + I + C+ +L G+++H+ ++ + +L+ M
Sbjct: 136 FSSMLRSGTMPDQFALGSAICA---CSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTM 192
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKY 135
YSK + +F + + ++ ++ ++I+G L F M GV P+++
Sbjct: 193 YSKSGSVGDGFALFERIR-DKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEF 251
Query: 136 TFPCLIKCCCDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
F + + C V+ LE ++IHG+ K LD + Y G +L + Y +C ++ A KVF
Sbjct: 252 HFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYR 311
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ D+V WN+++N ++ G +A+ +F M G+ TV +L A + G
Sbjct: 312 IESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQG 371
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R +H +VK+G V V N+L+ MY + A+++F ++D+ +WNSI+T Q
Sbjct: 372 RSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQH 431
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+ + +LF + + D ++ + VL A + L +Q+H Y GL
Sbjct: 432 QHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGL------- 484
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMF 433
+ D ++N L+D Y KCGS+ DA +F M + +DV SW+ +I+GY G KEALD+F
Sbjct: 485 -VGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLF 543
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+ M +KP+ VTFVGVL+ACS G + +G + +M+ YG+VPT EH +CV+D+L R
Sbjct: 544 ARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLAR 603
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AG+L+EA + MP E + ++W+TLLAASR H + D+ + AA+ V ++P H YVL+
Sbjct: 604 AGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLL 663
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
NIY + G + E ++ MR V+K+PG SWI+LK L FI DRSHPE+ IY L
Sbjct: 664 CNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTML 723
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 233/514 (45%), Gaps = 19/514 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-----LINMYSKCCQMKYALFVFNNLSCE 96
C+ +L +G+ +H ++L + D L+ + LI MY +C A VF+ + +
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGM-LD 110
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++ A+I+ N + F+ M + G +PD++ I C ++ + +++
Sbjct: 111 RNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H K D+ + +ALV Y K + + +FE + +D++ W +++ G AQ G
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230
Query: 217 HKALEVFRRMSKEGIWM-SRFTVTGVLSAL-IMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
AL++FR M EG+ + F V A +++ + G +HG+ VK D
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGC 290
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L DMY + + A ++F +E D+ SWNS++ G + LF M +G +P
Sbjct: 291 SLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRP 350
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D +T +L AC AL GR IH Y+V GL DV ++N+L+ MY +C
Sbjct: 351 DGITVMALLCACVGYDALHQGRSIHSYLVKLGLGG--------DVIVSNSLLSMYARCLD 402
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
A VF + +DV +WN ++ ++ +FS + + D ++ VLSA
Sbjct: 403 FSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSA 462
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ G+ ++ + + G+V +ID + G L++A +L M +
Sbjct: 463 SAELGYFEMVKQ-VHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVF 521
Query: 515 VWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
W +L+ A + L A R ++P H
Sbjct: 522 SWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNH 555
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 338/599 (56%), Gaps = 15/599 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +CA + ++Q G IH ++ G+ + SL++MYSKC + A +F+
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAV 150
+ N ++N MI G + + F+ + F M+ Q + ++ T ++ C ++ +
Sbjct: 194 K-NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQL 252
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+K++HG + G D + + V Y KC + A +VF + + V WNA++ G
Sbjct: 253 RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGC 312
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ G+ KAL ++ +M+ G+ FT+ +L A + + G+ VHG V++ G +
Sbjct: 313 AQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDS 372
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ +L+ +Y A +F+ MEEK SWN++++ + Q G + L LF +++S
Sbjct: 373 FIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSD 432
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GFQP + +VL ACS +AL G++ H Y + L ++DVF+ + +DMY
Sbjct: 433 GFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALL--------MEDVFVACSTIDMYA 484
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K G +++++ VF + KD+ASWN +I YG+ G G+E++++F M + PD TF+G
Sbjct: 485 KSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIG 544
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L+ CSH+G + +G ++ M++ +G+ P +EHY CV+DMLGRAG+L++A L MP +
Sbjct: 545 ILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQ 604
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ VW +LL+ R G ++ +I A+++ +LEP + NYV +SN+Y G++++V +R
Sbjct: 605 PDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVR 664
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAG 629
++ ++K+ GCSWIEL +H+F++ D P++K + S+T R E C G
Sbjct: 665 QMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEM-----SMTWRKLEKKMCKIG 718
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/515 (28%), Positives = 254/515 (49%), Gaps = 33/515 (6%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F P + C SL + G+ IH +++ G++ +LI MY K +
Sbjct: 31 NFTFPCVIKACTGSL-------DRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVD 83
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIK 142
A+ VF+ + N+ ++N++ISGF N F+ D M + G+LPD T ++
Sbjct: 84 AAVKVFHYMPVR-NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLP 142
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + V +IHGL KLGL DV + ++LV+ Y KC ++ EA +F++ ++ V
Sbjct: 143 VCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVS 202
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN M+ G G +A +FR M +E I ++ TV +L A + + ++ + +HG
Sbjct: 203 WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYS 262
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
++ G+ V N + Y K + A +F ME K + SWN+++ Q G+ L
Sbjct: 263 IRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKAL 322
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
L+ +M +G PD T ++L A +HL +L +G+++HG+++ +GL D F+
Sbjct: 323 NLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEI--------DSFI 374
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+L+ +Y CG A+++F M +K SWN MI GY +G ++AL +F +
Sbjct: 375 GISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGF 434
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREF------LPLMESRYGVVPTIEHYTCVIDMLGRAG 495
+P ++ V VL ACS L G+E LME + T IDM ++G
Sbjct: 435 QPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACST-------IDMYAKSG 487
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ E+ + + N+ + W ++AA +HG+ +
Sbjct: 488 CIKESRSVFDGLKNK-DLASWNAIIAAYGVHGDGE 521
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 336/597 (56%), Gaps = 20/597 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + + + IH ++++TG + +T L+N+YSKC M+ A VF+NL N
Sbjct: 71 LQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP-RRN 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + +++G+ N L F M + G P YT ++ C + ++ K++H
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K +D D IG++L + Y K + +E A+K F+ + +DV+ W ++++ G+ +
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L F M +G+ + +T+T VLSA +M G +H + +K+GY S + + N+++
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ---------CGNHDGT--LRLFDRM 327
+Y K + EA ++FE ME ++ +WN+++ H + + G+ L +F ++
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +PDL TFS+VL CS+L AL G QIHG I+ +G+ + DV + AL+
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGV--------LADVVVGTALVS 421
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS+ A F +M + + SW MI G+ G ++AL +F M +KP++VT
Sbjct: 422 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 481
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVLSACSH+G + + LM+ +Y + P ++H+ C+IDM R G++ EA+++ M
Sbjct: 482 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 541
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E N +W L+A R HG +DL AA+++ +L+P YV + N++++ G++++V
Sbjct: 542 NFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVS 601
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+++ V K SWI +K+ +++F +D+SH ++ +Y L ++ ++ G
Sbjct: 602 KVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALG 658
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 229/465 (49%), Gaps = 30/465 (6%)
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
+ Y FP L++ C D E + IHG + K G D+++ + LVN Y KC ME A K
Sbjct: 62 IESSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 120
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ LP R+V W ++ GY Q AL++F +M + G + S +T+ VL+A +
Sbjct: 121 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 180
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G+ VH ++K D + N+L Y K + + A++ F++++EKD+ SW S+++
Sbjct: 181 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 240
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
G +L F MLS G +P+ T ++VL AC + L G QIH + G +
Sbjct: 241 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 300
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG--MD----- 423
+ + N++M +Y KCG + +AQ +F M ++ +WN MI G+ MD
Sbjct: 301 --------ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDD 352
Query: 424 ----GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G AL MF + + +KPD TF VLS CS+ L QG + + + GV+
Sbjct: 353 VAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLA 411
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ-- 537
+ T ++ M + G +++A + L MP+ + W +++ HG L++ A Q
Sbjct: 412 DVVVGTALVSMYNKCGSIDKASKAFLEMPSR-TMISWTSMITGFARHG---LSQQALQLF 467
Query: 538 ---RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
R+ ++P ++S AG E + +Q N++
Sbjct: 468 EDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 512
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 175/391 (44%), Gaps = 60/391 (15%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C L G +IHS ++ G S L S++ +Y KC + A +F +
Sbjct: 268 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 327
Query: 94 SCEPNVFTYNAMISG------FYSNDFAF-----KGLDFFNHMRQLGVLPDKYTFPCLIK 142
N+ T+NAMI+G +D A L F + + G+ PD +TF ++
Sbjct: 328 ET-LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 386
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C +++A+ + ++IHG + K G+ DV +G+ALV+ Y KC +++A K F E+P R ++
Sbjct: 387 VCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS 446
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
W +M+ G+A+ G +AL++F M GI ++ T GVLSA G ++
Sbjct: 447 WTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 506
Query: 263 KMGYDSGVPVMN---ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
K Y+ PVM+ LIDMY + V EA ++ M
Sbjct: 507 KQ-YNIK-PVMDHFACLIDMYLRLGRVEEAFDVVHKM----------------------- 541
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
F+P+ +S ++ C HG+ G+ L K KD++
Sbjct: 542 -----------NFEPNETIWSMLIAGCRS-----HGKSDLGFYAAEQLLKLKP-KDVETY 584
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L++M+ G +D V M ++ V
Sbjct: 585 V---SLLNMHISAGRWKDVSKVRKLMKEEKV 612
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 133/279 (47%), Gaps = 21/279 (7%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + L +C++ L++G++IH ++++G++ + T+L++MY+KC + A F
Sbjct: 378 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 437
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++ +MI+GF + + + L F MR +G+ P++ TF ++ C
Sbjct: 438 EMPSR-TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLAD 496
Query: 152 EVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E L+ + + +D + + L++ YL+ +EEA V ++ + +W+ ++
Sbjct: 497 EALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLI 554
Query: 208 NGYAQIGE----FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI--- 260
G G+ F+ A ++ + K+ T +L+ I G +K+ V +
Sbjct: 555 AGCRSHGKSDLGFYAAEQLLKLKPKD-----VETYVSLLNMHISAGRWKDVSKVRKLMKE 609
Query: 261 --VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
V K+ S + + + K ++LE+++++E
Sbjct: 610 EKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLE 648
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/593 (34%), Positives = 336/593 (56%), Gaps = 53/593 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYALFVFNNL---- 93
LQ C T L+ IHS + G ++ +P + LI +YSK + A +F++
Sbjct: 32 LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHH 88
Query: 94 ---SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ PN F N M+ + + +++ +D + +M+++GV + +T+P ++K C +
Sbjct: 89 HGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGA 148
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + +HG V + G D+++ +ALV+ Y KC + +A +VF+ + +RDVV W AM+ Y
Sbjct: 149 VFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLY 208
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL +FR+M +EG T V SA+ +G +GR+
Sbjct: 209 EQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLG---DGRMA------------- 252
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ A +F+ MEE++ SWNS+++ + Q G L LF++M ++
Sbjct: 253 ---------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 297
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ VT ++ ACS+L + GR++H +++ + + DID + NA+MDMY
Sbjct: 298 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM-------DIDTT-LRNAIMDMYM 349
Query: 391 KCGSMRDAQMVFT--KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
KCG + A +F ++ ++DV+SWN++I GYG+ G GKEAL++FS M ++P+++TF
Sbjct: 350 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 409
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+LSACSH+G + +GR+ M ++ V P ++HY C++DMLGRAG LNEA+ L +P
Sbjct: 410 TSILSACSHAGLIDEGRKCFADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 468
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VW LL A R+HGNT+L EIAA +FQLEP H G YVLMSNIY A K++EV
Sbjct: 469 SRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEM 528
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+R M+ + ++K S IE +H F ++D+S P + +Y ++ SL ++
Sbjct: 529 VRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMK 581
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + + C++ + G+++H++++ + + ID+ L ++++MY KC + A+ +FNN
Sbjct: 305 TALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR-NAIMDMYMKCGDLDTAVEMFNN 363
Query: 93 LSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
E +V ++N +ISG+ + + L+ F+ M+ GV P+ TF ++ C +
Sbjct: 364 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 423
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM---- 206
E +K + KL + ++ + +V+ + F+ EA ++ +++P R +W A+
Sbjct: 424 EGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 483
Query: 207 -VNGYAQIGEF 216
++G ++GE
Sbjct: 484 RIHGNTELGEI 494
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/591 (32%), Positives = 330/591 (55%), Gaps = 21/591 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ +L+ G+ +H+ + G+ SL++MYSKC +M A VF+ ++ E + +
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD-VAEERDDVS 177
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD----VMAVLEVKKIH 157
+N+++SG+ + + F MR+ G+ + + +IKCC M + E +H
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEA--VH 235
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ----I 213
G V K GLD DV++ SA+++ Y K + EA +F + +VV++N M+ G+ + I
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295
Query: 214 GE--FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G+ +AL ++ + G+ + FT + VL A + G+ + G+ +HG V+K +
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +ALID+Y C+ + F + DI +W ++++ Q H+ L LF L AG
Sbjct: 356 IGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAG 415
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PDL T S+V+ AC+ LA G QI + +G + M N+ + MY +
Sbjct: 416 LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRF--------TVMGNSCVHMYAR 467
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A F +M DV SW+ +I + G ++AL F M +AK+ P+E+TF+GV
Sbjct: 468 SGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGV 527
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH G + +G + M YG+ PTI+H TCV+D+LGRAG+L +A A
Sbjct: 528 LTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHA 587
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+PV+WR+LLA+ R+H + + ++ A R+ +LEP +YV++ N+Y+ G+ R
Sbjct: 588 DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
M+Q+ V+K PG SWIELK G+H+F++ D+SHPE+ +IY +L + +R+ +
Sbjct: 648 LMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK 698
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 207/439 (47%), Gaps = 20/439 (4%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++N +I + A L+ R+ GV D++++ + C + + +H
Sbjct: 73 NAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L GL V++ ++LV+ Y KC M EA +VF+ RD V WN++V+GY + G
Sbjct: 133 ALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGARE 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMM--GFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ + VF M + G+ ++ F + V+ G VHG V+K G DS V +++A
Sbjct: 193 EMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSA 252
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT----VHEQCGNHDGT--LRLFDRMLS 329
+IDMY K + EA +F ++E ++ +N+++ G + L L+ + S
Sbjct: 253 MIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQS 312
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G QP TFS+VL AC+ L G+QIHG ++ +D F+ +AL+D+Y
Sbjct: 313 RGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQ--------EDDFIGSALIDLY 364
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
G M D F K D+ +W M+ G + ++AL +F A LKPD T
Sbjct: 365 FNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTIS 424
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVP-TIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V++AC+ G E + ++ G T+ +CV M R+G ++ A M
Sbjct: 425 SVMNACASLAVARAG-EQIQCFATKSGFDRFTVMGNSCV-HMYARSGDVDAATRRFQEME 482
Query: 509 NEANPVVWRTLLAASRLHG 527
+ + V W +++ HG
Sbjct: 483 SH-DVVSWSAVISCHAQHG 500
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 161/307 (52%), Gaps = 16/307 (5%)
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+++ + L+ Y + A ++ +E+P R+ V +N +++ Y++ G +LE R +
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G+ + RF+ L+A G + GR VH + + G SGV V N+L+ MY K +GE
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F++ EE+D SWNS+++ + + G + +R+F M G + +V+ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 349 L--AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ +HG ++ GL DVF+ +A++DMY K G++ +A +F +
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDS--------DVFLVSAMIDMYAKKGALVEAAALFRSVQ 274
Query: 407 KKDVASWNIMILGY----GMDGQ--GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+ +V +N MI G+ + G+ EAL ++S + ++P E TF VL AC+ +G+
Sbjct: 275 EPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGY 334
Query: 461 LSQGREF 467
L G++
Sbjct: 335 LEFGKQI 341
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 328/588 (55%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L CA L++G+ IHS + T G+ + SL+ MY+KC ++ A +F +S
Sbjct: 128 LGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGR- 186
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++NAMI+ + + + + + M V P TF ++ C ++ + + +KIH
Sbjct: 187 SVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIH 243
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L+ G +LD+ + +AL+ Y +C+ +++A K+F+ LP RDVV W+AM+ +A+ F
Sbjct: 244 ALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFD 303
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+E + +M EG+ + +T VL A +G + GR VH ++ GY + AL+
Sbjct: 304 EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALV 363
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL- 336
D+Y + EA +F+ +E +D W ++ + + G+ G L L+ M + P
Sbjct: 364 DLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATK 423
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+ +S V+ AC+ L A RQ H I +G+ I D + +L++MY++ G++
Sbjct: 424 IIYSCVISACASLGAFADARQAHSDIEADGM--------ISDFVLATSLVNMYSRWGNLE 475
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF KMS +D +W +I GY G+ AL ++ M +P E+TF+ VL ACS
Sbjct: 476 SARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACS 535
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G QG++ ++S Y + P I HY+C+ID+L RAG+L++A EL AMP E N V W
Sbjct: 536 HAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTW 595
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+LL ASR+H + A AA ++ +L+P +YVL+SN++ G + +R+TM +
Sbjct: 596 SSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVAR 655
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K G SWIE+ D +H F D SHP + I+AEL L+ +++E G
Sbjct: 656 GVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAG 703
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 23/390 (5%)
Query: 141 IKCCCDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
++ C D+ +V ++ +I G +V++G+ +V Y KC + A F+ + ++
Sbjct: 34 LRQCQDLESVRQIHDRISG-----AASANVFLGNEIVRAYGKCGSVASARAAFDAIARKN 88
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
W +M+ YAQ G + AL++++RM + + T VL A + + G+ +H
Sbjct: 89 DYSWGSMLTAYAQNGHYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHS 145
Query: 260 -IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
I G V + N+L+ MY K + +A +FE M + + SWN+++ + Q G+ +
Sbjct: 146 RISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFE 205
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+RL++ M +P + TF++VL ACS+L L GR+IH I G D
Sbjct: 206 EAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTEL--------D 254
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + NAL+ MY +C + DA +F ++ ++DV SW+ MI + EA++ +S M
Sbjct: 255 LSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQL 314
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
++P+ TF VL AC+ G L GR + G T+ + T ++D+ G L+
Sbjct: 315 EGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN-GYKITLVNGTALVDLYTSYGSLD 373
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGN 528
EA L + N + +W L+ G+
Sbjct: 374 EARSLFDQIENR-DEGLWTVLIGGYSKQGH 402
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 132/279 (47%), Gaps = 6/279 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA +L+ G+ +H +L G + ++ T+L+++Y+ + A +F+ +
Sbjct: 323 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 382
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLE 152
+ +I G+ L+ + M+ +P K + C+I C + A +
Sbjct: 383 ENRDEGL-WTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 441
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++ H + G+ D + ++LVN Y + +E A +VF+++ RD + W ++ GYA+
Sbjct: 442 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 501
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY--DSGV 270
GE AL +++ M EG S T VL A G + G+ + I ++ Y +
Sbjct: 502 HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNI 560
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ +ID+ + + +A E+ M E + +W+S++
Sbjct: 561 AHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 16/184 (8%)
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L C L ++ RQIH I +G A +VF+ N ++ Y KCGS+ A
Sbjct: 30 YRDALRQCQDLESV---RQIHDRI--SGAASA-------NVFLGNEIVRAYGKCGSVASA 77
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ F +++K+ SW M+ Y +G + ALD++ M L+P+ V + VL AC+
Sbjct: 78 RAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASI 134
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L +G+ + G+ + ++ M + G L +A L M + W
Sbjct: 135 KALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVS-SWNA 193
Query: 519 LLAA 522
++AA
Sbjct: 194 MIAA 197
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/598 (32%), Positives = 332/598 (55%), Gaps = 11/598 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G++IH Y+LR G + +I+ Y KC ++K +FN L + +
Sbjct: 262 LSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRL-VDKD 320
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ MI+G N F +D F M + G PD + ++ C + A+ + +++H
Sbjct: 321 VVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHA 380
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K+ +D D ++ + L++ Y KC + A KVF+ + +VV +NAM+ GY++ + +
Sbjct: 381 YAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVE 440
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++FR M + T +L + + +H +++K G +ALID
Sbjct: 441 ALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALID 500
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K CVG+A +FE + ++DI WN++ + + Q ++ +L+L+ + + +P+ T
Sbjct: 501 VYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFT 560
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ V+ A S++A+L HG+Q H ++ GL DD F+ N+L+DMY KCGS+ ++
Sbjct: 561 FAAVIAAASNIASLRHGQQFHNQVIKMGLD--------DDPFVTNSLVDMYAKCGSIEES 612
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F+ +++D+A WN MI Y G +AL++F M +KP+ VTFVG+LSACSH+
Sbjct: 613 HKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHA 672
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L G M S++G+ P I+HY C++ +LGRAG++ EA E MP + VVWR+
Sbjct: 673 GLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRS 731
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ G+ +L AA+ +P G+Y+L+SNI+ + G + V +R M V
Sbjct: 732 LLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRV 791
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC-AGTLFDSD 635
K PG SWIE+ + +H FI+ D +H ++ I L +L +++ G A T F D
Sbjct: 792 VKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYVPNAATFFLDD 849
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 268/523 (51%), Gaps = 18/523 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+ LA+ + + C NL + ++H ++++ G + TSLI+ Y+K + A +
Sbjct: 155 YILASVVRA---CTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLI 211
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L + V T+ A+I+G+ + L FN MR+ V PD+Y ++ C +
Sbjct: 212 FDGLKVKTTV-TWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEF 270
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K+IHG V + G D+DV + + +++ YLKC ++ K+F L +DVV W M+ G
Sbjct: 271 LEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAG 330
Query: 210 YAQIGEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q FH A+++F M ++G F T VL++ + + GR VH +K+ D+
Sbjct: 331 CMQ-NSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDN 389
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V N LIDMY K + A ++F+++ ++ S+N+++ + + L LF M
Sbjct: 390 DDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMR 449
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ P L+TF ++L S L L QIH I+ G++ D F +AL+D+
Sbjct: 450 LSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSL--------DSFAGSALIDV 501
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KC + DA++VF ++ +D+ WN M GY + +E+L ++ + ++LKP+E TF
Sbjct: 502 YSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTF 561
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V++A S+ L G++F + + G+ ++DM + G + E+++ A +
Sbjct: 562 AAVIAAASNIASLRHGQQFHNQV-IKMGLDDDPFVTNSLVDMYAKCGSIEESHK-AFSST 619
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
N+ + W ++++ HG+ A +R+ + G NYV
Sbjct: 620 NQRDIACWNSMISTYAQHGDAAKALEVFERM--IMEGVKPNYV 660
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 223/400 (55%), Gaps = 11/400 (2%)
Query: 52 QEIHSYMLRTGIIDSPL-SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
++IH++++ G + + +L++ YSK A +F+ + N+ T+++M+S +
Sbjct: 71 KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMP-HRNLVTWSSMVSMYT 129
Query: 111 SNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ ++ + L F MR P++Y +++ C + + + ++HG V K G DV
Sbjct: 130 QHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDV 189
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
Y+G++L++ Y K +++EA +F+ L ++ V W A++ GYA++G +L++F +M +
Sbjct: 190 YVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREG 249
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
++ R+ ++ VLSA M+ F + G+ +HG V++ G+D V V+N +ID Y K V
Sbjct: 250 DVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTG 309
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++F + +KD+ SW +++ Q H + LF M+ G++PD ++VL +C L
Sbjct: 310 RKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSL 369
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL GRQ+H Y + + D DD F+ N L+DMY KC S+ +A+ VF ++ +
Sbjct: 370 QALQKGRQVHAYAIKVNI-------DNDD-FVKNGLIDMYAKCDSLTNARKVFDLVAAIN 421
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
V S+N MI GY + EALD+F M + P +TFV
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFV 461
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 198/377 (52%), Gaps = 9/377 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C + L C LQKG+++H+Y ++ I + LI+MY+KC + A VF+ L
Sbjct: 359 CTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFD-LV 417
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
NV +YNAMI G+ D + LD F MR P TF L+ + +
Sbjct: 418 AAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSS 477
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IH L+ K G+ LD + GSAL++ Y KC + +A VFEE+ RD+V+WNAM +GY+Q
Sbjct: 478 QIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQL 537
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
E ++L++++ + + + FT V++A + ++G+ H V+KMG D V N
Sbjct: 538 ENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTN 597
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L+DMY K + E+ + F ++DI WNS+++ + Q G+ L +F+RM+ G +P
Sbjct: 598 SLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKP 657
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VTF +L ACSH L G H + ++K G ID ++ + + G
Sbjct: 658 NYVTFVGLLSACSHAGLLDLG--FHHF---ESMSKFGIEPGIDHY---ACMVSLLGRAGK 709
Query: 395 MRDAQMVFTKMSKKDVA 411
+ +A+ KM K A
Sbjct: 710 IYEAKEFVKKMPIKPAA 726
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 146/282 (51%), Gaps = 2/282 (0%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P TL T ++ L L + L+ +IH +++ G+ + ++LI++YSKC + A
Sbjct: 454 PPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARL 513
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++ +NAM SG+ + L + ++ + P+++TF +I ++
Sbjct: 514 VFEEIY-DRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIA 572
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++ ++ H V K+GLD D ++ ++LV+ Y KC +EE+ K F RD+ WN+M++
Sbjct: 573 SLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIS 632
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G+ KALEVF RM EG+ + T G+LSA G G + K G +
Sbjct: 633 TYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEP 692
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKD-IFSWNSIMT 309
G+ ++ + G+ + EA E + M K W S+++
Sbjct: 693 GIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLS 734
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A IA+ ++ +L+ GQ+ H+ +++ G+ D P SL++MY+KC ++ +
Sbjct: 559 FTFAAVIAA---ASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKA 615
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F++ + + ++ +N+MIS + + A K L+ F M GV P+ TF L+ C
Sbjct: 616 FSSTN-QRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHA-G 673
Query: 150 VLEVKKIH-GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAM- 206
+L++ H + K G++ + + +V+ + + EA + +++P++ V+W ++
Sbjct: 674 LLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLL 733
Query: 207 ----VNGYAQIGEFHKALEV 222
V+G+ ++G + + +
Sbjct: 734 SACRVSGHVELGTYAAEMAI 753
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/609 (34%), Positives = 332/609 (54%), Gaps = 31/609 (5%)
Query: 2 LSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT 61
L+ I R+ F+F T+ +++FN+ L C +SL +L + IH+ ++
Sbjct: 13 LAPIKRV-----LFDFRTNYHSRSFNY---LLNCCSSL------PDLSR---IHALVVTN 55
Query: 62 GIIDSPLSITSLINMYSKCC---QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
G + L T LI + CC M YA +F+ + + +VF +N +I G+ +
Sbjct: 56 GCGQNLLLSTKLI--ITACCLAPTMDYARKMFDQMP-KRDVFLWNTLIRGYADAGPCEEA 112
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L +++M G+ PD YTFP +++ C + A+ E K++H + K G D DV++ S+LV
Sbjct: 113 LALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAM 172
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y + VF E+ +R++V W A++ GY Q F + L VFR M G + T+
Sbjct: 173 YSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTL 232
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
VL A + F G+++HG +K+G D V + NALI +YGK V A +F+ M
Sbjct: 233 VSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVV 292
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+++ SWN+++ +EQ ++LF RM + D +T +V+ AC+ L AL GR +
Sbjct: 293 QNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWM 352
Query: 359 HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
H + GL N V + NAL+DMY KCG++ A+ VF ++ + V SW MI
Sbjct: 353 HELVKRKGLEIN--------VSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIG 404
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
G G++AL +FS M + +KP+ TF V +AC HSG + +GR+ M Y ++
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQR 538
P +EH C++D+LGRAG L EAYE MP E + VW LL + R+H N +LAE+ A++
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEK 524
Query: 539 VFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFIS 598
+F L+P YVLMSNIY G++E+ +R M ++ ++K PG S +E+ HTF+S
Sbjct: 525 LFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLS 584
Query: 599 SDRSHPEAK 607
RS +
Sbjct: 585 GSRSQSSLR 593
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/588 (34%), Positives = 324/588 (55%), Gaps = 10/588 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ CA L +G+ H +++ G+ + SL+ Y+K ++ A VF+ + +
Sbjct: 114 VKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-D 172
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+N M+ G+ SN L F M L V D + CC ++ ++ K+IH
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIH 232
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V + GL+ D+ +G++L++ Y KC + A VF +PLR VV WN M+ GYA
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A + F +M EG+ + T +L+A GR VHG VV+ + V + AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+MYGK V + +IF + K + SWN+++ + + + LF +L+ PD
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T STV+PA L +L H RQIH YI+ G A+N + NA++ MY + G +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAEN--------TLIMNAVLHMYARSGDVVA 464
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ +F KM KDV SWN MI+GY + GQGK AL+MF M L+P+E TFV VL+ACS
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG + +G LM YG++P IEHY C+ D+LGR G L E + +MP + VW
Sbjct: 525 SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWG 584
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL ASR + D+AE AA+R+FQLE + G Y+++S++Y G++E+V +R M+++
Sbjct: 585 SLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKG 644
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
+R+ S +EL +F + D SH ++++I+ + L+ ++ E D
Sbjct: 645 LRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRKIEETDD 692
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 210/437 (48%), Gaps = 11/437 (2%)
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P+ F +N MI GF L + M + G PD++TFP ++KCC + + E +
Sbjct: 70 PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+V KLGL+ DVY ++LV Y K +E+A +VF+ +P+RD+V WN MV+GY G
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLG 189
Query: 217 HKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
AL F+ M + + L+A + G+ +HG V++ G + + V +
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTS 249
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K V A +F M + + +WN ++ + D F +M + G Q +
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+VT +L AC+ + ++GR +HGY+V + V + AL++MY K G +
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQF--------LPHVVLETALLEMYGKVGKV 361
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
++ +F K++ K + SWN MI Y EA+ +F + L PD T V+ A
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAF 421
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
G L R+ + G V+ M R+G + + E+ M ++ + +
Sbjct: 422 VLLGSLRHCRQIHSYIIG-LGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK-DVIS 479
Query: 516 WRTLLAASRLHGNTDLA 532
W T++ +HG A
Sbjct: 480 WNTMIMGYAIHGQGKTA 496
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 164/312 (52%), Gaps = 1/312 (0%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA+L C + + +G+EIH Y++R G+ TSL++MY KC ++ YA VF +
Sbjct: 213 IAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+N MI G+ N+ + D F MR G+ + T L+ C + L +
Sbjct: 273 R-TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG V + V + +AL+ Y K +E + K+F ++ + +V WN M+ Y
Sbjct: 332 VHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEM 391
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +A+ +F + + ++ FT++ V+ A +++G ++ R +H ++ +GY +MNA
Sbjct: 392 YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ MY + V + EIF+ M KD+ SWN+++ + G L +FD M G QP+
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 336 LVTFSTVLPACS 347
TF +VL ACS
Sbjct: 512 ESTFVSVLTACS 523
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 11/339 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
M+EA++ + D L N M+ G+A G AL +R M ++G RFT V+
Sbjct: 57 MDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKC 116
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+G GR HG+V+K+G + V N+L+ Y K V +A +F+ M +DI +W
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
N+++ + G L F M A Q D V L AC + M G++IHGY++
Sbjct: 177 NTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVI 236
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+GL + D+ + +L+DMY KCG + A+ VF M + V +WN MI GY ++
Sbjct: 237 RHGLEQ--------DIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+ EA D F M L+ + VT + +L+AC+ + GR + R +P +
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ-FLPHVVL 347
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
T +++M G+ G++ + ++ + N+ V W ++AA
Sbjct: 348 ETALLEMYGKVGKVESSEKIFGKIANK-TLVSWNNMIAA 385
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T I L CA + G+ +H Y++R + + T+L+ MY K +++ + +F
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + ++N MI+ + + + + F + + PD +T ++ + ++
Sbjct: 370 KIA-NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLR 428
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IH + LG + I +A+++ Y + + + ++F+++ +DV+ WN M+ GYA
Sbjct: 429 HCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYA 488
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSGV 270
G+ ALE+F M G+ + T VL+A + G G + ++++ G +
Sbjct: 489 IHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQI 548
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
+ D+ G+ + E L+ E M + W S++T
Sbjct: 549 EHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLT 588
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 326/579 (56%), Gaps = 10/579 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L+ Q+IH+ ++ +G+ + SL+N Y C + A +F++ + NV ++ +I
Sbjct: 36 DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYK-NVVSWTILI 94
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
SG ND + +D F M P+ T ++ ++ + K +H + G +
Sbjct: 95 SGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+V++ +ALV+ Y K M A ++FE + R+VV WNA+V+GY+ G +A+++F M
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLM 214
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
++G+ + +T+ ++ A + +G + G +HG +++ GY++ + AL+D+Y CV
Sbjct: 215 RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPA 345
+A +F M KD+ +W ++T + D ++ F++ML + D + +L +
Sbjct: 275 DDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSS 334
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CSH AL GR++H + A N +F+ +A++DMY CG++ DA+ F M
Sbjct: 335 CSHSGALQQGRRVHALAIKTCFANN--------IFVGSAVIDMYANCGNLEDAKRFFYGM 386
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+KDV WN MI G GM+G G +A+D+F M + L PDE TFV VL ACSH+G + +G
Sbjct: 387 GEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGL 446
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M V+P ++HY CVID+LGRAGQL+ AY MP + + V+ TLL A R+
Sbjct: 447 QIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRI 506
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN L +Q++F++EP G YVL+SN+Y G +E V R ++R + ++K+PG S
Sbjct: 507 HGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFS 566
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE+ ++TF++ ++ HP+ I L L ++++ G
Sbjct: 567 SIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAG 605
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+H LQ+G+ +H+ ++T ++ +++I+MY+ C ++ A F + E +
Sbjct: 332 LSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKD 390
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
V +NAMI+G N + +D F M+ G+ PD+ TF ++ C V E
Sbjct: 391 VVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE 444
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 332/594 (55%), Gaps = 13/594 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +L+ C ++ G+ IH ++ + + S L + +SLI MY KC +M AL +FN
Sbjct: 43 TLPVALKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNE 102
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVL 151
L +P++ T+++M+SGF N ++ ++FF M V PD+ T L+ C +
Sbjct: 103 LE-KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSR 161
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +HG V + G D+ + ++L+N Y K + +EA+ +F+ + +DV+ W+ ++ Y
Sbjct: 162 LGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYV 221
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G +AL VF M +G + TV VL A + GR H + ++ G ++ V
Sbjct: 222 QNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVK 281
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SA 330
V AL+DMY K EA +F + +KD+ SW ++++ G ++ F ML
Sbjct: 282 VSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 341
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD + VL +CS L L H Y++ G N F+ +L+++Y+
Sbjct: 342 NTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNP--------FIGASLVELYS 393
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFV 449
+CGS+ +A VF +++ KD W +I GYG+ G+G +AL+ F+ M + ++KP+EVTF+
Sbjct: 394 RCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFL 453
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LSACSH+G + +G LM + Y + P +EHY ++D+LGR G+L+ A E+ MP
Sbjct: 454 SILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPF 513
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
P + TLL A R+H N ++AE A+++F+LE H G Y+LMSN+Y G++E V +
Sbjct: 514 SPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKL 573
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
R++++Q+ ++K S IE++ +H F++ D HPE + +Y L L ++E+
Sbjct: 574 RNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHPEKEPVYGLLKELDLHMKEN 627
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/436 (31%), Positives = 237/436 (54%), Gaps = 21/436 (4%)
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ +N ++ + + + F+ M + PD +T P +K C ++ V + IHG
Sbjct: 6 LYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHG 65
Query: 159 LVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K + L D+Y+GS+L+ Y+KC M EAL++F EL D+V W++MV+G+ + G +
Sbjct: 66 FLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPY 125
Query: 218 KALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A+E FRRM+ + R T+ ++SA + + GR VHG V++ G+ + + ++N+L
Sbjct: 126 QAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSL 185
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++ Y K + EA+ +F+MM EKD+ SW++++ + Q G LR+F+ M+ G +P++
Sbjct: 186 LNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNV 245
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T VL AC+ L GR+ H + GL +V ++ AL+DMY KC S
Sbjct: 246 ATVLCVLQACAAANDLEQGRKTHELAIRKGLE--------TEVKVSTALVDMYMKCFSPE 297
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSAC 455
+A VF+++ KKDV SW +I G+ ++G +++ FS M E +PD + + VL +C
Sbjct: 298 EAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSC 357
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY----ELALAMPNEA 511
S GFL Q F + +YG ++++ R G L A E+AL
Sbjct: 358 SELGFLKQAECFHSYV-IKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIAL-----K 411
Query: 512 NPVVWRTLLAASRLHG 527
+ VVW +L+ +HG
Sbjct: 412 DTVVWTSLITGYGIHG 427
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 174/332 (52%), Gaps = 12/332 (3%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R + WN ++ ++ + + + F +M ++ FT+ L A + K G ++
Sbjct: 4 RTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMI 63
Query: 258 HGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
HG + K + S + V ++LI MY K + EAL +F +E+ DI +W+S+++ E+ G+
Sbjct: 64 HGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGS 123
Query: 317 HDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ F RM +A PD VT T++ AC+ L+ GR +HG+++ G +
Sbjct: 124 PYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFS------- 176
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+D+ + N+L++ Y K + ++A +F M++KDV SW+ +I Y +G EAL +F+
Sbjct: 177 -NDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNE 235
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + +P+ T + VL AC+ + L QGR+ L R G+ ++ T ++DM +
Sbjct: 236 MIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELA-IRKGLETEVKVSTALVDMYMKCF 294
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
EAY + +P + + V W L++ L+G
Sbjct: 295 SPEEAYAVFSRIPKK-DVVSWVALISGFTLNG 325
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 135/268 (50%), Gaps = 4/268 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + LQ CA +L++G++ H +R G+ T+L++MY KC + A VF+
Sbjct: 245 VATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 304
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +V ++ A+ISGF N A + ++ F+ M + PD ++ C ++ +
Sbjct: 305 RIP-KKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFL 363
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + H V K G D + +IG++LV Y +C + A KVF E+ L+D V+W +++ GY
Sbjct: 364 KQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGY 423
Query: 211 AQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
G+ KALE F M + + + T +LSA G G R+ +V
Sbjct: 424 GIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAP 483
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMM 296
+ L+D+ G+ + A+EI + M
Sbjct: 484 NLEHYAVLVDLLGRVGELDTAIEITKRM 511
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 14/247 (5%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M ++ ++ WN+++ + + + + F +M +PD T L AC L + +G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
IHG+ L KN + D+++ ++L+ MY KCG M +A +F ++ K D+ +W+
Sbjct: 61 EMIHGF-----LKKNVTLG--SDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSS 113
Query: 416 MILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
M+ G+ +G +A++ F M A + PD VT + ++SAC+ GR + R
Sbjct: 114 MVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV-MR 172
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
G + +++ ++ EA L M E + + W T++A +G A
Sbjct: 173 RGFSNDLSLVNSLLNCYAKSRAFKEAVNL-FKMMAEKDVISWSTVIACYVQNG----AAA 227
Query: 535 AAQRVFQ 541
A RVF
Sbjct: 228 EALRVFN 234
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 334/584 (57%), Gaps = 19/584 (3%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KG+E+H++++RTG+ D+ ++I L+NMY+K + A VF L E + ++N++IS
Sbjct: 876 RKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFE-LMVEKDSVSWNSLIS 934
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N+ + + F MR+ G +P +T + C + ++ ++IH KLGLD
Sbjct: 935 GLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDT 994
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEVFRRM 226
DV + +AL+ Y + E LKVF +P D V WN+++ + +A++ F M
Sbjct: 995 DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEM 1054
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +SR T +LSA+ + + +H +V+K + NAL+ YGK +
Sbjct: 1055 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEM 1114
Query: 287 GEALEIFEMMEE-KDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
E +IF M E +D SWNS+++ +H + + L F M+ G + D TF+TVL
Sbjct: 1115 NECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWF--MMQKGQRLDSFTFATVL 1172
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ +A L G ++H + +C + DV + +AL+DMY+KCG + A F
Sbjct: 1173 SACASVATLERGMEVHACGI-------RACME-SDVVVGSALVDMYSKCGRIDYASRFFE 1224
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT-FVGVLSACSHSGFLS 462
M ++V SWN MI GY G G++AL +F+ M PD V +GVLSACSH GF+
Sbjct: 1225 LMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVE 1284
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G E M Y + P +EH++C++D+LGRAG+L+E + +MP + N ++WRT+L A
Sbjct: 1285 EGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 1344
Query: 523 S-RLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
R +G NT+L AA+ + +LEP + NYVL++N+Y +G K+E+V R M++ V+K
Sbjct: 1345 CCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKK 1404
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
GCSW+ +KDG+H F++ D+ HPE IY +L L ++R+ G
Sbjct: 1405 EAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAG 1448
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 243/527 (46%), Gaps = 38/527 (7%)
Query: 15 FNFSTSSGNQT-FNHPFTLATCIASLQ--LCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT 71
+ STS N T F+ T + I Q C+ ++ +E+H ++ G + +
Sbjct: 529 YKTSTSHCNTTLFSSSETFESLINRYQGSCCS-----EEARELHLQSIKYGFVGNLFLSN 583
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
+LIN+Y + + A +F+ +S N+ T+ +ISG+ N + F M + G +
Sbjct: 584 TLINIYVRIGDLGSAQKLFDEMS-NRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFI 642
Query: 132 PDKYTFPCLIKCCCDVMAV---LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC-QFMEE 187
P+ Y F ++ C + L V +IHGL+ K DV + + L++ Y C +
Sbjct: 643 PNHYAFGSALRACQESGPSGCKLGV-QIHGLISKTRYGSDVVVCNVLISMYGSCLDSAND 701
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS----RFTVTGVLS 243
A VF+ + +R+ + WN++++ Y++ G+ A ++F M KEG+ S +T +++
Sbjct: 702 ARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT 761
Query: 244 AL---IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
A + G +++ V K G+ + V +AL+ + + +A IFE M ++
Sbjct: 762 AACSSVDFGLCVLEQML-ARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRN 820
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAAL----MHG 355
+ S N +M + + ++F M G D ++ +L A S + L G
Sbjct: 821 VVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKG 878
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
R++H +++ GL N V + N L++MY K G++ DA VF M +KD SWN
Sbjct: 879 REVHAHVIRTGLNDN-------KVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 931
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I G + ++A + F M P T + LS+C+ G++ G E + +
Sbjct: 932 LISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLG-EQIHCDGLKL 990
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G+ + ++ + G E ++ MP E + V W +++ A
Sbjct: 991 GLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIGA 1036
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 172/326 (52%), Gaps = 6/326 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I++L CA + G++IH L+ G +D+ +S++ +L+ +Y++ L VF +
Sbjct: 963 TLISTLSSCASLGWIMLGEQIHCDGLKLG-LDTDVSVSNALLALYAETGCFTECLKVF-S 1020
Query: 93 LSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
L E + ++N++I ++ + + + +F M + G + TF ++ +
Sbjct: 1021 LMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHE 1080
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGY 210
+IH LV K L D IG+AL++ Y KC M E K+F + RD V WN+M++GY
Sbjct: 1081 VSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGY 1140
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
HKA+++ M ++G + FT VLSA + + G VH ++ +S V
Sbjct: 1141 IHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDV 1200
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +AL+DMY K + A FE+M ++++SWNS+++ + + G+ + L+LF RM+
Sbjct: 1201 VVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 1260
Query: 331 GFQPDLVT-FSTVLPACSHLAALMHG 355
G PD V VL ACSH+ + G
Sbjct: 1261 GQPPDHVAPLLGVLSACSHVGFVEEG 1286
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 143/282 (50%), Gaps = 11/282 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+ + ++SL L H+ + Q IH+ +L+ + D +L++ Y KC +M +F
Sbjct: 1068 NILSAVSSLSL--HEVSHQ----IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 1121
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+S + ++N+MISG+ N+ K +D M Q G D +TF ++ C V +
Sbjct: 1122 ARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATL 1181
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++H + ++ DV +GSALV+ Y KC ++ A + FE +PLR+V WN+M++GY
Sbjct: 1182 ERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGY 1241
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFT-VTGVLSALIMMGFFKNGRVVHGIVVKMGY--D 267
A+ G KAL++F RM +G + GVLSA +GF + G H + Y
Sbjct: 1242 ARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEEG-FEHFKSMSEVYRLS 1300
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIM 308
V + ++D+ G+ + E + M K ++ W +++
Sbjct: 1301 PRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 317/555 (57%), Gaps = 11/555 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + A +F+ + E +V + MI+G+ S + F M +
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMP-ERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEEL 105
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF-MEEAL 189
P+ +T ++K C + + + +HGL K GLD +Y+ +AL++ Y C M++A
Sbjct: 106 DPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDAC 165
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VF + L++ V W ++ GY + + L VFR+M E + ++ F+ + + A +G
Sbjct: 166 MVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIG 225
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G +H V K G++S +PVMN+++DMY + C EA F M ++D+ +WN+++
Sbjct: 226 SHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIA 285
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+E+ N +L +F M S GF P+ TF++++ AC+ LA L G+QIHG I+ GL
Sbjct: 286 GYER-SNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDG 344
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N + ++NAL+DMY+KCG++ D+ VF MS++D+ SW M++GYG G G+EA
Sbjct: 345 N--------LALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEA 396
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+++F M + ++PD V F+ +LSACSH+G + +G + LM Y + P E Y CV+D
Sbjct: 397 VELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVD 456
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+LGRAG++ EAYEL +MP + + VW L A + H +L ++AA R+ L P G
Sbjct: 457 LLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGT 516
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
YV++SNIY A GK+ E +R M++ +K G SW+E+ + +++F+ D + + I
Sbjct: 517 YVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGI 576
Query: 610 YAELHSLTARLREHG 624
Y L +L ++E G
Sbjct: 577 YQVLENLIGHMKESG 591
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 179/359 (49%), Gaps = 14/359 (3%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L+ +Y + EA +F+E+P RDVV W M+ GY A VF M E
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG--E 288
+ + FT++ VL A M GR+VHG+ +K G D + V NAL+DMY CV +
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATC-CVSMDD 163
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F + K+ SW +++ + + G LR+F +ML + + +FS + AC+
Sbjct: 164 ACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTS 223
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
+ + G Q+H + +G N + + N+++DMY +C +A F +M+++
Sbjct: 224 IGSHTFGEQLHAAVTKHGFESN--------LPVMNSILDMYCRCSCFSEANRYFYEMNQR 275
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
D+ +WN +I GY E+L +FS M P+ TF +++AC+ FL+ G++
Sbjct: 276 DLITWNTLIAGYERSNP-TESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 334
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R G+ + +IDM + G + +++++ M + + V W ++ HG
Sbjct: 335 GRIIRR-GLDGNLALSNALIDMYSKCGNIADSHQVFGGM-SRRDLVSWTAMMIGYGTHG 391
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 134/273 (49%), Gaps = 6/273 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF+ + + + C + G+++H+ + + G + + S+++MY +C A
Sbjct: 210 NPFSFSIAV---RACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEAN 266
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F ++ + ++ T+N +I+G Y + L F+ M G P+ +TF ++ C +
Sbjct: 267 RYFYEMN-QRDLITWNTLIAG-YERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATL 324
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ ++IHG + + GLD ++ + +AL++ Y KC + ++ +VF + RD+V W AM+
Sbjct: 325 AFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMM 384
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GY G +A+E+F +M + GI R +LSA G G R +V
Sbjct: 385 IGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNI 444
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ G+ V EA E+ E M K
Sbjct: 445 SPDQEIYGCVVDLLGRAGKVEEAYELIESMPFK 477
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 119/244 (48%), Gaps = 15/244 (6%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
+++ R NP S + FS + FT + +A+ CA L GQ+IH ++R
Sbjct: 283 LIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAA---CATLAFLNCGQQIHGRIIR 339
Query: 61 TGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
G+ D L+++ +LI+MYSKC + + VF +S ++ ++ AM+ G+ ++ + + +
Sbjct: 340 RGL-DGNLALSNALIDMYSKCGNIADSHQVFGGMS-RRDLVSWTAMMIGYGTHGYGEEAV 397
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNT 178
+ F+ M + G+ PD+ F ++ C V E ++ +V + D I +V+
Sbjct: 398 ELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDL 457
Query: 179 YLKCQFMEEALKVFEELPLR-DVVLWNAMVNG-----YAQIGEF--HKALEVFRRMSKEG 230
+ +EEA ++ E +P + D +W + + +G+ H+ L++ M+
Sbjct: 458 LGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTY 517
Query: 231 IWMS 234
+ +S
Sbjct: 518 VMLS 521
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 329/607 (54%), Gaps = 79/607 (13%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L C + ++ G+ H ++++ G+ TSLI+MY+KC ++ A+ V++ ++
Sbjct: 118 SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT-S 176
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ T N +IS + N F + F + +G P+ YT+ ++ C + A+ E K++
Sbjct: 177 LDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQL 236
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V K+ + +G+AL+ Y KC MEEA VFE L R+++ W A +NG+ Q G+F
Sbjct: 237 HAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDF 296
Query: 217 HKALEVFRRMSKEGI--------------------WM----------------------- 233
KAL+ F M + GI WM
Sbjct: 297 KKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKM 356
Query: 234 ------------SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
++F + +L A + + G +H +++K ++S +++ALI MY
Sbjct: 357 IEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYS 416
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K V +A +F+ + ++ SWN+++ F +ML GF P VT S+
Sbjct: 417 KCGHVEKACRVFDWI--PNVVSWNTLIAG-------------FSQMLDQGFCPSSVTISS 461
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+LPAC+++A L HG++IHGY +V G+ K DV++ +AL+DMY KCG + +A+++
Sbjct: 462 LLPACTNVANLRHGKEIHGYAMVIGVEK--------DVYVRSALVDMYAKCGYISEAKIL 513
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F M +++ +WN +I GY G EA+++F+ M E+ K D +TF VL+ACSH+G +
Sbjct: 514 FYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMV 573
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G M+ +Y + P +EHY C++D+LGRAG+L+EAY+L AMP E + VW LL
Sbjct: 574 ELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLG 633
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R HGN +LAE+AA+ +F+LEP G+ +L+SN+Y G++ ++ M+Q+ K
Sbjct: 634 ACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKF 693
Query: 582 PGCSWIE 588
PGCSWIE
Sbjct: 694 PGCSWIE 700
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 198/414 (47%), Gaps = 75/414 (18%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQ-TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
++S +R F F GN T + +T +T +A +C + +Q+G+++H++++
Sbjct: 185 LISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLA---VCGTISAIQEGKQLHAHVV 241
Query: 60 RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
+ + +L+ +YSKC M+ A VF NL + N+ ++ A I+GFY + K L
Sbjct: 242 KMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLG-QRNIISWTASINGFYQHGDFKKAL 300
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCC-CD------------------VMAVLEVKK----- 155
F+ MR+ G+ P+++TF ++ C CD +M++ ++K
Sbjct: 301 KQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEG 360
Query: 156 -------------------------------IHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
+H ++ K + D YI SAL+ Y KC
Sbjct: 361 NKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGH 420
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+E+A +VF+ +P +VV WN ++ G++Q M +G S T++ +L A
Sbjct: 421 VEKACRVFDWIP--NVVSWNTLIAGFSQ-------------MLDQGFCPSSVTISSLLPA 465
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ ++G+ +HG + +G + V V +AL+DMY K + EA +F MM E++ +W
Sbjct: 466 CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTW 525
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
NS++ + G + + LF++M + + D +TF+ VL ACSH + G +
Sbjct: 526 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 579
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
GF FS L C + GR+ H ++V GL D F+ +L+D
Sbjct: 106 FGGGFPHRQYVFSA-LSFCGREGCVELGRRWHCFVVKIGLG--------SDEFVCTSLID 156
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG + A V+ KM+ D A+ N +I Y +G +A +F + +P+ T
Sbjct: 157 MYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYT 216
Query: 448 FVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
+ +L+ C + +G++ +++ +Y + + ++ + + G + EA E+
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSKCGMMEEA-EIVFE 273
Query: 507 MPNEANPVVWRTLLAASRLHGN--TDLAEIAAQRVFQLEP 544
+ N + W + HG+ L + + R +EP
Sbjct: 274 NLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEP 313
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 189/590 (32%), Positives = 322/590 (54%), Gaps = 12/590 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ L+ C N G +H + ++TG+++S ++L++MY K ++ +
Sbjct: 116 PFLLSL---GLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + N T+ A+I+G ++ GL +F+ M + V D Y + +K D
Sbjct: 173 VFDEMPTR-NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ + IH K G D + ++ ++L Y KC ++ L F ++ DVV W +V
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y Q+G+ L+ F+RM + + +T + V+S K G +H V+ +G+ +
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+++ +Y K + ++F M+ +DI +W++I+ + Q G + RM
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S G +P+ ++VL C +A L G+Q+H +++ GL + + +AL+ M
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS--------MVCSALIIM 463
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ +A +F K D+ SW MI GY G +EA+++F + + L+PD VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL+ACSH+G + G + M Y + P+ EHY C+ID+L RAG+L++A L +MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VVW TLL A R+HG+ D + AA V +L+P G ++ ++NI+ A GK++E +
Sbjct: 584 IQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAAN 643
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
IR M+ + V K PG S +++KD + F+S DRSHP+ + IY L L +
Sbjct: 644 IRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELAS 693
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 239/519 (46%), Gaps = 28/519 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F +G +T ++P L T SL L AH +N E ++ +
Sbjct: 13 FTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQL---------------- 56
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPD 133
+ K +K A +F+ L V ++ +ISG+ ++ + + L F+ MR Q + D
Sbjct: 57 KILVKTNHLKDARDLFDQLPQRDEV-SWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ +K C + L +HG K GL V++GSAL++ Y+K + + KVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P R+ V W A++ G + G L F M + + + L A G +
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
GR +H +K G+D V N+L MY K + L F M D+ SW +I+T + Q
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G D L+ F RM ++ P+ TFS V+ C++ A L G Q+H +++ G
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF------ 349
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
++ + + N++M +Y+KCG + VF M +D+ +W+ +I Y G G+EA +
Sbjct: 350 --VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYL 407
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S M KP+E VLS C L QG++ + S G+ T + +I M +
Sbjct: 408 SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS-VGLEQTSMVCSALIIMYAK 466
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G + EA ++ + + + + W +++ HG++ A
Sbjct: 467 CGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEA 504
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/504 (36%), Positives = 298/504 (59%), Gaps = 10/504 (1%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G P+ +TFP IK C + + K++H VFK G L+ ++ ++L++ Y KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 185 MEEALKVFEELP--LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
++ A K+F+E P + V +N++++GYA + +F M + G+ ++ T+ G++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ G G VHG VK G D V N L+ MY K + ++F+ M K +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+WN+++ + Q G + L L+ M S GF PD +T VL +C+HL AL G+++ +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
G + N F+NNAL++MY +CG+++ A+ +F M K V SW +I GYGM
Sbjct: 241 EGFGFSSN--------PFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGM 292
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
GQG+ A+ +F M +KPD FV VLSACSH+G ++G ++ +ME +YG+ P E
Sbjct: 293 HGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAE 352
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY+C++D+LGRAG+LNEA EL +M A+ +W LL A ++H N +LAE+A ++V +L
Sbjct: 353 HYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIEL 412
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP + G YVL+SN+Y G E +L +R MR++ ++K+PGCS++E K +H F + DR+
Sbjct: 413 EPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRN 472
Query: 603 HPEAKSIYAELHSLTARLREHGDC 626
HP+ IY +L+ L +++ C
Sbjct: 473 HPQTNEIYKKLNELENLVKDLDGC 496
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 201/408 (49%), Gaps = 26/408 (6%)
Query: 17 FSTSSGNQTFNHPFTLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
+ + F PF + +C A SL + G+++H ++ +TG + P TSLI+
Sbjct: 2 LRSGASPNAFTFPFAIKSCAALSLPI--------TGKQLHCHVFKTGCLLEPFVQTSLIS 53
Query: 76 MYSKCCQMKYALFVFN-NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MY KC + A +F+ N YN+++SG+ N + F MR+LGV +
Sbjct: 54 MYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEING 113
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
T L++ C + +HG K GLD+D +G+ L+ Y+K ++ K+F+E
Sbjct: 114 VTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDE 173
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P + ++ WNAM+NGYAQ G + LE+++ M +G T+ GVLS+ +G G
Sbjct: 174 MPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVG 233
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ V + G+ S + NAL++MY + + +A +IF+ M K + SW +I+ +
Sbjct: 234 KEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMH 293
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN-GL---AKN 370
G + + LFD M+ G +PD F +VL ACSH G G + GL A++
Sbjct: 294 GQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEH 353
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
SC ++D+ + G + +A+ + M + D A W ++
Sbjct: 354 YSC-----------MVDLLGRAGRLNEARELIESMQVRADGALWGALL 390
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/591 (32%), Positives = 330/591 (55%), Gaps = 21/591 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ +L+ G+ +H+ + G+ SL++MYSKC +M A VF+ ++ E + +
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD-VAEERDDVS 177
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD----VMAVLEVKKIH 157
+N+++SG+ + + F MR+ G+ + + +IKCC M + E +H
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEA--VH 235
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ----I 213
G V K GLD DV++ SA+++ Y K + EA +F + +VV++N M+ G+ + I
Sbjct: 236 GCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVI 295
Query: 214 GE--FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G+ +AL ++ + G+ + FT + VL A + G+ + G+ +HG V+K +
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +ALID+Y C+ + F + DI +W ++++ Q H+ L LF L AG
Sbjct: 356 IGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAG 415
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PDL T S+V+ AC+ LA G QI + +G + M N+ + MY +
Sbjct: 416 LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRF--------TVMGNSCVHMYAR 467
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A F +M DV SW+ +I + G ++AL F M +AK+ P+E+TF+GV
Sbjct: 468 SGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGV 527
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH G + +G + M YG+ PTI+H TCV+D+LGRAG+L +A A
Sbjct: 528 LTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHA 587
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+PV+WR+LLA+ R+H + + ++ A R+ +LEP +YV++ N+Y+ G+ R
Sbjct: 588 DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
M+Q+ V+K PG SWIELK G+H+F++ D+SHPE+ +IY +L + +R+ +
Sbjct: 648 LMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK 698
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 207/439 (47%), Gaps = 20/439 (4%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++N +I + A L+ R+ GV D++++ + C + + +H
Sbjct: 73 NAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L GL V++ ++LV+ Y KC M EA +VF+ RD V WN++V+GY + G
Sbjct: 133 ALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGARE 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMM--GFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ + VF M + G+ ++ F + V+ G VHG V+K G DS V +++A
Sbjct: 193 EMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSA 252
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT----VHEQCGNHDGT--LRLFDRMLS 329
+IDMY K + EA +F ++E ++ +N+++ G + L L+ + S
Sbjct: 253 MIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQS 312
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G QP TFS+VL AC+ L G+QIHG ++ +D F+ +AL+D+Y
Sbjct: 313 RGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQ--------EDDFIGSALIDLY 364
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
G M D F K D+ +W M+ G + ++AL +F A LKPD T
Sbjct: 365 FNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTIS 424
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVP-TIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V++AC+ G E + ++ G T+ +CV M R+G ++ A M
Sbjct: 425 SVMNACASLAVARAG-EQIQCFATKSGFDRFTVMGNSCV-HMYARSGDVDAATRRFQEME 482
Query: 509 NEANPVVWRTLLAASRLHG 527
+ + V W +++ HG
Sbjct: 483 SH-DVVSWSAVISCHAQHG 500
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 161/307 (52%), Gaps = 16/307 (5%)
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+++ + L+ Y + A ++ +E+P R+ V +N +++ Y++ G +LE R +
Sbjct: 43 LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G+ + RF+ L+A G + GR VH + + G SGV V N+L+ MY K +GE
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F++ EE+D SWNS+++ + + G + +R+F M G + +V+ CS
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222
Query: 349 L--AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ +HG ++ GL DVF+ +A++DMY K G++ +A +F +
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDS--------DVFLVSAMIDMYAKKGALVEAAALFRSVQ 274
Query: 407 KKDVASWNIMILGY----GMDGQ--GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+ +V +N MI G+ + G+ EAL ++S + ++P E TF VL AC+ +G+
Sbjct: 275 EPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGY 334
Query: 461 LSQGREF 467
L G++
Sbjct: 335 LEFGKQI 341
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 323/576 (56%), Gaps = 14/576 (2%)
Query: 53 EIHSYMLRTGIIDSPLSITS---LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
++H++ ++ G D+ L +T L+ Y + ++ A +F + + + T+N +I+G+
Sbjct: 162 QVHAFAVKLGF-DTNLFLTVCNVLLKSYCEVRRLDLACVLFEEI-LDKDSVTFNTLITGY 219
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + + F MRQ G P +TF ++K + +++HGL G D
Sbjct: 220 EKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDA 279
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+G+ +++ Y K + E +F E+P D V +N +++ Y+Q ++ ++L +FR M
Sbjct: 280 SVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCM 339
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G F +LS + + GR VH + DS + V N+L+DMY K + EA
Sbjct: 340 GFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEA 399
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IF+ + ++ SW ++++ + Q G H L+LF +M A + D TF+TVL A +
Sbjct: 400 ELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGF 459
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A+L+ G+Q+H +I+ +G ++++VF + L+DMY KCGS++DA VF +M ++
Sbjct: 460 ASLLLGKQLHAFIIRSG--------NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 511
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SWN +I Y +G G+ A+ F+ M ++ L+PD V+ +GVL ACSH GF+ QG EF
Sbjct: 512 AVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQ 571
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M YG+ P +HY C++D+LGR G+ EA +L MP E + ++W ++L A R++ N
Sbjct: 572 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQ 631
Query: 530 DLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
LAE AA+++F +E YV MSNIY A GK+E V ++ MR++ ++K P SW+E
Sbjct: 632 SLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVE 691
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +H F S+D++HP I +++ LT + G
Sbjct: 692 VNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREG 727
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 243/481 (50%), Gaps = 15/481 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S ++I+ Y K + A +F+ + + V T+ ++ + N+ + F M +
Sbjct: 76 VSTNTMISGYVKMGDLSSARHLFDAMP-DRTVVTWTILMGWYAGNNHFDEAFKLFRQMCR 134
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG--SALVNTYLKCQFM 185
LPD TF L+ C D + V ++H KLG D ++++ + L+ +Y + + +
Sbjct: 135 SCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRL 194
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
+ A +FEE+ +D V +N ++ GY + G + +A+ +F +M + G S FT +GVL A+
Sbjct: 195 DLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAV 254
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ + F G+ +HG+ V G+ V N ++ Y K V E +F M E D S+N
Sbjct: 255 VGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYN 314
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
+++ + Q ++ +L LF M GF F+T+L ++L++L GRQ+H +V
Sbjct: 315 VVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIV- 373
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
+ I + + N+L+DMY KC +A+++F +S++ SW +I GY G
Sbjct: 374 -----ATADSI--LHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGL 426
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
L +F+ M A L+ D+ TF VL A + L G++ + R G + + +
Sbjct: 427 HGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFI-IRSGNLENVFSGS 485
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LE 543
++DM + G + +A ++ MP+ N V W L++A +G+ + A A ++ Q L+
Sbjct: 486 GLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQ 544
Query: 544 P 544
P
Sbjct: 545 P 545
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 154/307 (50%), Gaps = 1/307 (0%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++H + TG +++ YSK ++ +FN + E + +YN +IS +
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMP-ELDFVSYNVVISSYS 321
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + L+ F M+ +G + F ++ ++ ++ +++H D ++
Sbjct: 322 QAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILH 381
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G++LV+ Y KC+ +EA +F+ L R V W A+++GY Q G L++F +M
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T VL A G+ +H +++ G V + L+DMY K + +A+
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++FE M +++ SWN++++ + G+ + + F +M+ +G QPD V+ VL ACSH
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCG 561
Query: 351 ALMHGRQ 357
+ G +
Sbjct: 562 FVEQGTE 568
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 183/412 (44%), Gaps = 48/412 (11%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++ + K G + D + V L+ + ALKV++E+P ++ V N M++GY +
Sbjct: 28 TRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVK 87
Query: 213 IGE-------------------------------FHKALEVFRRMSKEGIWMSRFTVTGV 241
+G+ F +A ++FR+M + T T +
Sbjct: 88 MGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTL 147
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSG--VPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
L VH VK+G+D+ + V N L+ Y + + + A +FE + +K
Sbjct: 148 LPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDK 207
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D ++N+++T +E+ G + + LF +M +G +P TFS VL A L G+Q+H
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLH 267
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
G V G +++ S + N ++ Y+K + + + +F +M + D S+N++I
Sbjct: 268 GLSVTTGFSRDAS--------VGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISS 319
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
Y Q +E+L++F M F +LS ++ L GR+ ++
Sbjct: 320 YSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQV--HCQAIVATAD 377
Query: 480 TIEHY-TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA---SRLHG 527
+I H ++DM + +EA EL ++ + V W L++ LHG
Sbjct: 378 SILHVGNSLVDMYAKCEMFDEA-ELIFKSLSQRSTVSWTALISGYVQKGLHG 428
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 44/239 (18%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T L+ A +L G+++H++++R+G +++ S + L++MY+KC +K A+ VF
Sbjct: 447 STFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 506
Query: 93 LSCEPNVFTYNAMISGFYSN-----------------------------------DFAFK 117
+ + N ++NA+IS + N F +
Sbjct: 507 MP-DRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQ 565
Query: 118 GLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
G +FF M + G+ P K + C++ E +K L+ ++ + D + S+++
Sbjct: 566 GTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK---LMDEMPFEPDEIMWSSVL 622
Query: 177 NT--YLKCQFMEE--ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
N K Q + E A ++F LRD + +M N YA G++ V + M + GI
Sbjct: 623 NACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGI 681
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 319/574 (55%), Gaps = 10/574 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G +H++ + G+ + ++++++Y K + + A VF+ + E + +N MISGF
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFS 190
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + + F M +G+ D T ++ ++ I L K GL DVY
Sbjct: 191 RNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L++ Y KC + +F+++ D++ +NAM++GY E A+ +FR + G
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
++ T+ G++ + + R++ + +K+G V AL +Y + V A
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ EK + SWN++++ + Q G D + LF M+ P+ VT +++L AC+ L
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+ +HG I L N V+++ AL+DMY KCGS+ +A+ +F M K+V
Sbjct: 430 ALSIGKWVHGLIKSERLESN--------VYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI GYG+ G GKEAL +F M ++ + P VTF+ +L ACSHSG +S+G E
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M + YG P EHY C++D+LGRAGQL A E MP E P VW LL A +H NT+
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
+A +A++R+FQL+P + G YVL+SNIY + + +R ++++ + K PGC+ IE+
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
D + F S DRSHP+A +I+ L LT ++RE G
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 242/493 (49%), Gaps = 17/493 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L + T L + +I + ++ GI SIT L + + + + +FN +S +P+
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS-KPD 76
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+F +N +I GF N + + H+R+ L PD +T+ I + +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G+ ++++GSA+V+ Y K E A KVF+ +P RD VLWN M++G+++ F
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ VF M G+ T+ VL+A+ + ++ G + + K G S V V+ LI
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 278 DMYGK-GK-CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+Y K GK C G L F+ +++ D+ S+N++++ + + + LF +L++G + +
Sbjct: 257 SLYSKCGKSCKGRIL--FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T ++P L R I + G+ S ++ AL +Y + +
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS--------VSTALTTVYCRLNEV 366
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ A+ +F + +K +ASWN MI GY +G A+ +F M +L P+ VT +LSAC
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSAC 425
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ G LS G+ L++S + + T ++DM + G + EA +L M ++ N V
Sbjct: 426 AQLGALSIGKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK-NVVT 483
Query: 516 WRTLLAASRLHGN 528
W ++ LHG+
Sbjct: 484 WNAMITGYGLHGH 496
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 209/424 (49%), Gaps = 18/424 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T +A LQ + G I + G+ +T LI++YSKC + +F
Sbjct: 219 TVLTAVAELQ------EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +P++ +YNAMISG+ N + F + G + T LI +
Sbjct: 273 DQID-QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ I L K+G+ L + +AL Y + ++ A ++F+E P + + WNAM++GY
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G +A+ +F+ M + + + TVT +LSA +G G+ VHG++ +S V
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+DMY K + EA ++F++M +K++ +WN+++T + G+ L+LF ML +
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G P VTF ++L ACSH + G +I + +A N + + + + ++D+
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEI-----FHSMANNYGFQPMSEHYA--CMVDILG 563
Query: 391 KCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+ G + +A +M + A W + LG M + E ++ S +L P+ V +
Sbjct: 564 RAGQLTNALEFIERMPLEPGPAVWGAL-LGACMIHKNTEMANVASKRL-FQLDPENVGYY 621
Query: 450 GVLS 453
+LS
Sbjct: 622 VLLS 625
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 173/383 (45%), Gaps = 12/383 (3%)
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+ D+ + L + + + ++F ++ D+ L+N ++ G++ G ++ ++
Sbjct: 41 GIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLY 100
Query: 224 RRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
+ K + FT +SA + + G ++H + G S + V +A++D+Y K
Sbjct: 101 THLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFK 160
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
A ++F++M E+D WN++++ + + ++R+F ML G D T +TV
Sbjct: 161 FTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L A + L G I GL DV++ L+ +Y+KCG +++F
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLH--------SDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
++ + D+ S+N MI GY + + + A+ +F + + + + T VG++ L
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQ 332
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
R + + + G++ T + + R ++ A +L P E + W +++
Sbjct: 333 LSR-LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISG 390
Query: 523 SRLHGNTDLAEIAAQRVF-QLEP 544
+G TD A Q + QL P
Sbjct: 391 YTQNGLTDRAISLFQEMMPQLSP 413
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/597 (31%), Positives = 336/597 (56%), Gaps = 20/597 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + + + IH ++++TG + +T L+N+YSKC M+ A VF+NL N
Sbjct: 65 LQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP-RRN 123
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + +++G+ N L F M + G P YT ++ C + ++ K++H
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K +D D IG++L + Y K + +E A+K F+ + +DV+ W ++++ G+ +
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L F M +G+ + +T+T VLSA +M G +H + +K+GY S + + N+++
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ---------CGNHDGT--LRLFDRM 327
+Y K + EA ++FE ME ++ +WN+++ H + + G+ L +F ++
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +PDL TFS+VL CS+L AL G QIHG I+ +G+ + DV + AL+
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGV--------LADVVVGTALVS 415
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS+ A F +M + + SW MI G+ G ++AL +F M +KP++VT
Sbjct: 416 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 475
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVLSACSH+G + + LM+ +Y + P ++H+ C+IDM R G++ EA+++ M
Sbjct: 476 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 535
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E N +W L+A R HG +DL AA+++ +L+P YV + N++++ G++++V
Sbjct: 536 NFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVS 595
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+++ V K SWI +K+ +++F +D+SH ++ +Y L ++ ++ G
Sbjct: 596 KVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALG 652
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 229/465 (49%), Gaps = 30/465 (6%)
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
+ Y FP L++ C D E + IHG + K G D+++ + LVN Y KC ME A K
Sbjct: 56 IESSYYFP-LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHK 114
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ LP R+V W ++ GY Q AL++F +M + G + S +T+ VL+A +
Sbjct: 115 VFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQS 174
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G+ VH ++K D + N+L Y K + + A++ F++++EKD+ SW S+++
Sbjct: 175 IEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISS 234
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
G +L F MLS G +P+ T ++VL AC + L G QIH + G +
Sbjct: 235 CCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSS 294
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG--MD----- 423
+ + N++M +Y KCG + +AQ +F M ++ +WN MI G+ MD
Sbjct: 295 --------ILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDD 346
Query: 424 ----GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G AL MF + + +KPD TF VLS CS+ L QG + + + GV+
Sbjct: 347 VAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI-IKSGVLA 405
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ-- 537
+ T ++ M + G +++A + L MP+ + W +++ HG L++ A Q
Sbjct: 406 DVVVGTALVSMYNKCGSIDKASKAFLEMPSR-TMISWTSMITGFARHG---LSQQALQLF 461
Query: 538 ---RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
R+ ++P ++S AG E + +Q N++
Sbjct: 462 EDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIK 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 60/392 (15%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C L G +IHS ++ G S L S++ +Y KC + A +F +
Sbjct: 262 TLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 321
Query: 94 SCEPNVFTYNAMISG------FYSNDFAF-----KGLDFFNHMRQLGVLPDKYTFPCLIK 142
N+ T+NAMI+G +D A L F + + G+ PD +TF ++
Sbjct: 322 ET-LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 380
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C +++A+ + ++IHG + K G+ DV +G+ALV+ Y KC +++A K F E+P R ++
Sbjct: 381 VCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS 440
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
W +M+ G+A+ G +AL++F M GI ++ T GVLSA G ++
Sbjct: 441 WTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 500
Query: 263 KMGYDSGVPVMN---ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
K Y+ PVM+ LIDMY + V EA ++ M
Sbjct: 501 KQ-YNIK-PVMDHFACLIDMYLRLGRVEEAFDVVHKM----------------------- 535
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
F+P+ +S ++ C HG+ G+ L K KD++
Sbjct: 536 -----------NFEPNETIWSMLIAGCRS-----HGKSDLGFYAAEQLLKLKP-KDVETY 578
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+L++M+ G +D V M ++ V
Sbjct: 579 V---SLLNMHISAGRWKDVSKVRKLMKEEKVG 607
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 94/182 (51%), Gaps = 7/182 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + L +C++ L++G++IH ++++G++ + T+L++MY+KC + A F
Sbjct: 372 LFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFL 431
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + ++ +MI+GF + + + L F MR +G+ P++ TF ++ C
Sbjct: 432 EMPSR-TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLAD 490
Query: 152 EVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E L+ + + +D + + L++ YL+ +EEA V ++ + +W+ ++
Sbjct: 491 EALYYFELMQKQYNIKPVMDHF--ACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLI 548
Query: 208 NG 209
G
Sbjct: 549 AG 550
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 337/587 (57%), Gaps = 15/587 (2%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVF 100
L A QT L G++IH ++ + G SLI+MYS+ + A +F+++ ++
Sbjct: 182 LKACQT-LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFR-DMG 239
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++NAMISG N A + LD + MR G+ D T ++ C + + IH V
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K GL+ ++++ +AL+N Y K + +A KVF+++ LRDVV WN+++ Y Q + A
Sbjct: 300 IKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTAR 359
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDM 279
F +M G+ T+ + S +KN R VHG +++ G+ V + NA++DM
Sbjct: 360 GFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDM 419
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV-- 337
Y K + A ++F ++ KD+ SWN++++ + Q G + ++ RM+ + L
Sbjct: 420 YAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVY-RMMEECREIKLNQG 478
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ ++L A +H+ AL G +IHG+++ L DVF+ L+D+Y KCG + D
Sbjct: 479 TWVSILAAYAHVGALQQGMRIHGHLIKTNLHL--------DVFVGTCLIDLYGKCGRLVD 530
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +F ++ ++ WN +I +G+ G G++AL +F M + +KPD VTF+ +LSACSH
Sbjct: 531 AMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSH 590
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG + +G+ F LM+ YG+ P+++HY C++D+LGRAG L AY+ MP + +W
Sbjct: 591 SGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWG 649
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A R+HGN +L + A+ R+F+++ + G YVL+SNIY GK+E V +R R++
Sbjct: 650 ALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERG 709
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K PG S IE+ + F + ++SHP+ K IYAEL LTA+++ G
Sbjct: 710 LKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLG 756
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 184/621 (29%), Positives = 314/621 (50%), Gaps = 61/621 (9%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
+ +H+ ++ +G I S L+N+Y+ + + F+ + +V+T+N+MIS +
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ-RKDVYTWNSMISAYV 150
Query: 111 SNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N + +D F+ + D YTFP ++K C +++ +KIH VFKLG DV
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGFQWDV 207
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ ++L++ Y + F+ A +F+++P RD+ WNAM++G Q G +AL+V M E
Sbjct: 208 FVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 267
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
GI M TV +L +G ++H V+K G + + V NALI+MY K +G+A
Sbjct: 268 GINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDA 327
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++F+ M +D+ SWNSI+ +EQ + F +M G +PDL+T ++ +
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ R +HG+I+ G ++ V + NA+MDMY K G + A VF + KD
Sbjct: 388 RDYKNSRSVHGFIMRRGWL-------MEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKD 440
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFL 468
V SWN +I GY +G EA++++ M E + +K ++ T+V +L+A +H G L QG
Sbjct: 441 VVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG---- 496
Query: 469 PLMESRYGVVPTIEHY-----TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
M ++ T H TC+ID+ G+ G+L +A L +P E++ V W +++
Sbjct: 497 --MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS-VPWNAIISCH 553
Query: 524 RLHGNTDLAEIAAQRVFQ---LEPGHCGNYVLMSNIYVAG----GKYEEVLDIRHTMRQQ 576
+HG+ + A + R Q ++P H L+S +G GK+ H M++
Sbjct: 554 GIHGHGEKA-LKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKW-----FFHLMQEY 607
Query: 577 NVR---KNPGC--------SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
++ K+ GC ++E+ + FI HP+A SI+ +L R HG+
Sbjct: 608 GIKPSLKHYGCMVDLLGRAGFLEMA---YDFIKDMPLHPDA-SIWG---ALLGACRIHGN 660
Query: 626 CCAGT-----LFDSDSTASGF 641
G LF+ DS G+
Sbjct: 661 IELGKFASDRLFEVDSENVGY 681
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 3/325 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L +CA ++ IH Y+++ G+ +LINMY+K + A VF +
Sbjct: 275 TVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM 334
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N++I+ + ND FF M+ G+ PD T L
Sbjct: 335 FLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNS 393
Query: 154 KKIHGLVFKLGLDLD-VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +HG + + G ++ V IG+A+++ Y K ++ A KVF +P++DVV WN +++GY Q
Sbjct: 394 RSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQ 453
Query: 213 IGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A+EV+R M + I +++ T +L+A +G + G +HG ++K V
Sbjct: 454 NGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVF 513
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V LID+YGK + +A+ +F + + WN+I++ H G+ + L+LF M G
Sbjct: 514 VGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEG 573
Query: 332 FQPDLVTFSTVLPACSHLAALMHGR 356
+PD VTF ++L ACSH + G+
Sbjct: 574 VKPDHVTFISLLSACSHSGLVDEGK 598
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 17/405 (4%)
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
H RQ ++ F L C L K++H L+ G +I LVN Y
Sbjct: 67 HWRQ-PAKNEEIDFNSLFDSCT---KTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLG 122
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF-TVTGVL 242
+ + F+++ +DV WN+M++ Y + G F +A++ F ++ + + F T VL
Sbjct: 123 DVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVL 182
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A + +GR +H V K+G+ V V +LI MY + VG A +F+ M +D+
Sbjct: 183 KACQTL---VDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMG 239
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
SWN++++ Q GN L + D M G D VT +++LP C+ L + IH Y+
Sbjct: 240 SWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV 299
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+ +GL ++F++NAL++MY K G++ DAQ VF +M +DV SWN +I Y
Sbjct: 300 IKHGLEF--------ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQ 351
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+ A F M L+PD +T V + S + S R + R ++ +
Sbjct: 352 NDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVV 411
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
V+DM + G ++ A+++ +P + + V W TL++ +G
Sbjct: 412 IGNAVMDMYAKLGVIDSAHKVFNLIPVK-DVVSWNTLISGYTQNG 455
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 186/477 (38%), Positives = 280/477 (58%), Gaps = 8/477 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ C + K HG V +LGL+ D + L+N Y KC + A KVF+E+P R
Sbjct: 4 LLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERS 63
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Q GE KA+++F M +EG S FTV+ V+ A G R +H
Sbjct: 64 MVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHA 123
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+K D+ V V ALID+Y K + +A +FE M E++ +W+SI+ Q ++
Sbjct: 124 FAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEE 183
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF R G + + S+V+ AC+ LAAL+ GRQ+H + G N
Sbjct: 184 GLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNN-------- 235
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ +AL+DMY KCGS+ +A ++F + KK+V WN +I G+ E +++F M +
Sbjct: 236 FVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQT 295
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++PDEVT+V VLSAC H G + +GR + LM + V P + HY+C++D+LGR G ++E
Sbjct: 296 GMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHE 355
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A+EL MP A +W +LLA+ R+HGN +LAEIAA+ +F++EP GNYVL++N Y A
Sbjct: 356 AHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAA 415
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
K+EE R +++ + K G SWIE+KD +HTF++ +R+HP IY EL++L
Sbjct: 416 SKKWEEAAKARKSLKGSEILKERGKSWIEIKDKVHTFMAGERTHPRITDIYLELNNL 472
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 9/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ CA G+ H ++R G+ L+ L+NMYSKC ++ A VF+ + E +
Sbjct: 5 LQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIP-ERS 63
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI N K +D F M++ G ++T ++ C V +++H
Sbjct: 64 MVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHA 123
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K +D DV++G+AL++ Y KC +E+A VFE +P R+ V W+++V G+ Q + +
Sbjct: 124 FAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEE 183
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +F R + G+ ++F ++ V+ A + GR VH IV + G+ V +AL+D
Sbjct: 184 GLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVD 243
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + EA +F +E+K++ WN+I++ + + LF+ M G QPD VT
Sbjct: 244 MYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVT 303
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ VL AC H+ + GR Y + N S +V + ++D+ + G + +A
Sbjct: 304 YVAVLSACVHVGLVDKGRS---YFDLMTREHNVS----PNVLHYSCMVDILGRGGLVHEA 356
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+ TKM AS W ++
Sbjct: 357 HELMTKMPFAATASMWGSLL 376
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/588 (34%), Positives = 323/588 (54%), Gaps = 10/588 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ CA L +G+ H +++ G+ + SL+ Y+K ++ A VF+ + +
Sbjct: 114 VKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR-D 172
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+N M+ G+ SN L F M L V D + CC + ++ K+IH
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V + GL+ D+ +G++L++ Y KC + A VF +PLR VV WN M+ GYA
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A + F +M EG+ + T +L+A GR VHG VV+ + V + AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+MYGK V + +IF + K + SWN+++ + + + LF +L+ PD
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T STV+PA L +L H RQIH YI+ G A+N + NA++ MY + G +
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAEN--------TLIMNAVLHMYARSGDVVA 464
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ +F KM KDV SWN MI+GY + GQGK AL+MF M L+P+E TFV VL+ACS
Sbjct: 465 SREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSV 524
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG + +G LM YG++P IEHY C+ D+LGR G L E + +MP + VW
Sbjct: 525 SGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWG 584
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL ASR + D+AE AA+R+FQLE + G Y+++S++Y G++E+V +R M+++
Sbjct: 585 SLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKG 644
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
+R+ S +EL +F + D SH ++++I+ L+ +++E D
Sbjct: 645 LRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRKIKETDD 692
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 210/437 (48%), Gaps = 11/437 (2%)
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P+ F +N MI GF L + M + G PD++TFP ++KCC + + E +
Sbjct: 70 PDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAA 129
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+V KLGL+ DVY ++LV Y K +E+A +VF+ +P+RD+V WN MV+GY G
Sbjct: 130 HGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLG 189
Query: 217 HKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
AL F+ M + + L+A + G+ +HG V++ G + + V +
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTS 249
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K V A +F M + + +WN ++ + D F +M + G Q +
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+VT +L AC+ + ++GR +HGY+V + V + AL++MY K G +
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQF--------LPHVVLETALLEMYGKVGKV 361
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
++ +F K++ K + SWN MI Y EA+ +F + L PD T V+ A
Sbjct: 362 ESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAF 421
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
G L R+ + G V+ M R+G + + E+ M ++ + +
Sbjct: 422 VLLGSLRHCRQIHSYIIG-LGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSK-DVIS 479
Query: 516 WRTLLAASRLHGNTDLA 532
W T++ +HG A
Sbjct: 480 WNTMIMGYAIHGQGKTA 496
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 164/312 (52%), Gaps = 1/312 (0%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA+L C + + +G+EIH Y++R G+ TSL++MY KC ++ YA VF +
Sbjct: 213 IAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPL 272
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+N MI G+ N+ + D F MR G+ + T L+ C + L +
Sbjct: 273 R-TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG V + V + +AL+ Y K +E + K+F ++ + +V WN M+ Y
Sbjct: 332 VHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEM 391
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +A+ +F + + ++ FT++ V+ A +++G ++ R +H ++ +GY +MNA
Sbjct: 392 YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ MY + V + EIF+ M KD+ SWN+++ + G L +FD M G QP+
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 336 LVTFSTVLPACS 347
TF +VL ACS
Sbjct: 512 ESTFVSVLTACS 523
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 11/339 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
M+EA++ + D L N M+ G+A G AL +R M ++G RFT V+
Sbjct: 57 MDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKC 116
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+G GR HG+V+K+G + V N+L+ Y K V +A +F+ M +DI +W
Sbjct: 117 CARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTW 176
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
N ++ + G L F M A Q D V L AC + M G++IHGY++
Sbjct: 177 NIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVI 236
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+GL + D+ + +L+DMY KCG + A+ VF M + V +WN MI GY ++
Sbjct: 237 RHGLEQ--------DIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+ EA D F M L+ + VT + +L+AC+ + GR + R +P +
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ-FLPHVVL 347
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
T +++M G+ G++ + ++ + N+ V W ++AA
Sbjct: 348 ETALLEMYGKVGKVESSEKIFGKIANK-TLVSWNNMIAA 385
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T I L CA + G+ +H Y++R + + T+L+ MY K +++ + +F
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + ++N MI+ + + + + F + + PD +T ++ + ++
Sbjct: 370 KIA-NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLR 428
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IH + LG + I +A+++ Y + + + ++F+++ +DV+ WN M+ GYA
Sbjct: 429 HCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYA 488
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSGV 270
G+ ALE+F M G+ + T VL+A + G G + ++++ G +
Sbjct: 489 IHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQI 548
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
+ D+ G+ + E L+ E M + W S++T
Sbjct: 549 EHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLT 588
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 319/574 (55%), Gaps = 10/574 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G +H++ + G+ + ++++++Y K + + A VF+ + E + +N MISGF
Sbjct: 132 GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFS 190
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + + F M +G+ D T ++ ++ I L K GL DVY
Sbjct: 191 RNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVY 250
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L++ Y KC + +F+++ D++ +NAM++GY E A+ +FR + G
Sbjct: 251 VLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASG 310
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
++ T+ G++ + + R++ + +K+G V AL +Y + V A
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ EK + SWN++++ + Q G D + LF M+ P+ VT +++L AC+ L
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLG 429
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+ +HG I L N V+++ AL+DMY KCGS+ +A+ +F M K+V
Sbjct: 430 ALSIGKWVHGLIKSERLESN--------VYVSTALVDMYAKCGSIVEARQLFDLMVDKNV 481
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI GYG+ G GKEAL +F M ++ + P VTF+ +L ACSHSG +S+G E
Sbjct: 482 VTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHS 541
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M + YG P EHY C++D+LGRAGQL A E MP E P VW LL A +H NT+
Sbjct: 542 MANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTE 601
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
+A +A++R+FQL+P + G YVL+SNIY + + +R ++++ + K PGC+ IE+
Sbjct: 602 MANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
D + F S DRSHP+A +I+ L LT ++RE G
Sbjct: 662 DQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 242/493 (49%), Gaps = 17/493 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L + T L + +I + ++ GI SIT L + + + + +FN +S +P+
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVS-KPD 76
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+F +N +I GF N + + H+R + + PD +T+ I + +H
Sbjct: 77 LFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLH 136
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G+ ++++GSA+V+ Y K E A KVF+ +P RD VLWN M++G+++ F
Sbjct: 137 AHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFE 196
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ VF M G+ T+ VL+A+ + ++ G + + K G S V V+ LI
Sbjct: 197 DSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLI 256
Query: 278 DMYGK-GK-CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+Y K GK C G L F+ +++ D+ S+N++++ + + + LF +L++G + +
Sbjct: 257 SLYSKCGKSCKGRIL--FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T ++P L R I + G+ S ++ AL +Y + +
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPS--------VSTALTTVYCRLNEV 366
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ A+ +F + +K +ASWN MI GY +G A+ +F M +L P+ VT +LSAC
Sbjct: 367 QFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM-PQLSPNPVTVTSILSAC 425
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ G LS G+ L++S + + T ++DM + G + EA +L M ++ N V
Sbjct: 426 AQLGALSIGKWVHGLIKSER-LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDK-NVVT 483
Query: 516 WRTLLAASRLHGN 528
W ++ LHG+
Sbjct: 484 WNAMITGYGLHGH 496
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 209/424 (49%), Gaps = 18/424 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T+ T +A LQ + G I + G+ +T LI++YSKC + +F
Sbjct: 219 TVLTAVAELQ------EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + +P++ +YNAMISG+ N + F + G + T LI +
Sbjct: 273 DQID-QPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ I L K+G+ L + +AL Y + ++ A ++F+E P + + WNAM++GY
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G +A+ +F+ M + + + TVT +LSA +G G+ VHG++ +S V
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V AL+DMY K + EA ++F++M +K++ +WN+++T + G+ L+LF ML +
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G P VTF ++L ACSH + G +I + +A N + + + + ++D+
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEI-----FHSMANNYGFQPMSEHYA--CMVDILG 563
Query: 391 KCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+ G + +A +M + A W + LG M + E ++ S +L P+ V +
Sbjct: 564 RAGQLTNALEFIERMPLEPGPAVWGAL-LGACMIHKNTEMANVASKRL-FQLDPENVGYY 621
Query: 450 GVLS 453
+LS
Sbjct: 622 VLLS 625
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 174/383 (45%), Gaps = 12/383 (3%)
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+ D+ + L + + + ++F ++ D+ L+N ++ G++ G ++ ++
Sbjct: 41 GIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLY 100
Query: 224 RRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
+ K+ + FT +SA + + G ++H + G S + V +A++D+Y K
Sbjct: 101 THLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFK 160
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
A ++F++M E+D WN++++ + + ++R+F ML G D T +TV
Sbjct: 161 FTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATV 220
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L A + L G I GL DV++ L+ +Y+KCG +++F
Sbjct: 221 LTAVAELQEYRLGMGIQCLASKKGLH--------SDVYVLTGLISLYSKCGKSCKGRILF 272
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
++ + D+ S+N MI GY + + + A+ +F + + + + T VG++ L
Sbjct: 273 DQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQ 332
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
R + + + G++ T + + R ++ A +L P E + W +++
Sbjct: 333 LSR-LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP-EKSLASWNAMISG 390
Query: 523 SRLHGNTDLAEIAAQRVF-QLEP 544
+G TD A Q + QL P
Sbjct: 391 YTQNGLTDRAISLFQEMMPQLSP 413
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/633 (32%), Positives = 340/633 (53%), Gaps = 21/633 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L C A +G+EIH + R + + T+L++ Y+KC +
Sbjct: 120 FTFPFVLKACSA-------LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDD 172
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + + +V +N+MISGF ++ ++ + Q V P+ T ++
Sbjct: 173 AKEVFDKMH-KRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVA 231
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWN 204
V ++ K+IHG + G DV +G+ +++ Y KCQ ++ A ++F+ + + ++ V W+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291
Query: 205 AMVNGYAQIGEFHKALEVFRRM---SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
AMV Y +ALE+F ++ + I +S T+ V+ + G +H
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
+K G+ + V N L+ MY K + A+ F M+ +D S+ +I++ + Q GN + L
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
R+F M +G P+ T ++VLPAC+HLA L +G H Y ++ G D +
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTA--------DTMI 463
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NAL+DMY KCG + A+ VF +M K+ + SWN MI+ YG+ G G EAL +F M L
Sbjct: 464 CNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGL 523
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KPD+VTF+ ++SACSHSG +++G+ + M +G++P +EHY C++D+L RAG E +
Sbjct: 524 KPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVH 583
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
MP E + VW LL+A R++ N +L E ++++ +L P GN+VL+SN+Y A G
Sbjct: 584 SFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVG 643
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD-RSHPEAKSIYAELHSLTARL 620
++++ +R T ++Q K+PGCSWIE+ +HTF+ RSHP+ I +L L +
Sbjct: 644 RWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEM 703
Query: 621 REHGDCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
+ G + D E+ LY E +A
Sbjct: 704 KRLGYQAESSYVFQDVEEEEKERVLLYHSEKLA 736
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/517 (28%), Positives = 268/517 (51%), Gaps = 36/517 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLR-------TGIIDSPLSITSLINMYSKCCQ 82
+L C L+ C +L +G+ IH ++L+ T + + + L+++Y C +
Sbjct: 7 LSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSE 66
Query: 83 MKYALFVFNNLSCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
+K A VF+ + P NV +N +I + N + +D + M G+ P+++TFP ++
Sbjct: 67 LKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVL 126
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K C + E ++IH + +L L+ +VY+ +ALV+ Y KC +++A +VF+++ RDVV
Sbjct: 127 KACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVV 186
Query: 202 LWNAMVNGYA-QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
WN+M++G++ G + + + +M + + + T+ GVL A+ + ++G+ +HG
Sbjct: 187 AWNSMISGFSLHEGSYDEVARLLVQMQND-VSPNSSTIVGVLPAVAQVNSLRHGKEIHGF 245
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDG 319
V+ G+ V V ++D+YGK +C+ A IF+MM K+ +W++++ + C
Sbjct: 246 CVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMRE 305
Query: 320 TLRLFDRMLSAGFQPDL-----VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
L LF ++L + D+ VT +TV+ C++L L G +H Y + +G
Sbjct: 306 ALELFCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGF------- 356
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ D+ + N L+ MY KCG + A F +M +D S+ +I GY +G +E L MF
Sbjct: 357 -VLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFL 415
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP--TIEHYTC--VIDM 490
M + + P++ T VL AC+H L G Y ++ T + C +IDM
Sbjct: 416 EMQLSGINPEKATLASVLPACAHLAGLHYGS-----CSHCYAIICGFTADTMICNALIDM 470
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G+++ A ++ M ++ V W T++ A +HG
Sbjct: 471 YAKCGKIDTARKVFDRM-HKRGIVSWNTMIIAYGIHG 506
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 334/600 (55%), Gaps = 18/600 (3%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
SSG + FT + L CA +L+ G + HS +++ + + +L++MY+K
Sbjct: 421 SSGYNIDDFTFT-----SLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAK 475
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C ++ A +F ++ C+ + ++N +I G+ ++ + D F M G++ D
Sbjct: 476 CGALEDARQIFEHM-CDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLAS 534
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+K C +V + + K++H L K GLD ++ GS+L++ Y KC +E+A KVF +P
Sbjct: 535 TLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWS 594
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV NA++ GY+Q +A+ +F+ M +G+ S T ++ A G HG
Sbjct: 595 VVSMNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 260 IVVKMGYDS-GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNH 317
++K G+ S G + +L+ +Y + + EA +F E+ K I W +M+ H Q G +
Sbjct: 654 QIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L+ + M G PD TF TVL CS L++L GR IH I LA D+D
Sbjct: 714 EEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIF--HLAH-----DLD 766
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGMDGQGKEALDMFSCM 436
++ +N L+DMY KCG M+ + VF +M ++ +V SWN +I GY +G ++AL +F M
Sbjct: 767 EL-TSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
++ + PDE+TF+GVL+ACSH+G +S GR+ +M +YG+ ++H C++D+LGR G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L EA + A + + +W +LL A R+HG+ EIAA+R+ +LEP + YVL+SNI
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNI 945
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y + G++EE +R MR + V+K PG SWI++ H F + D+SH + I L L
Sbjct: 946 YASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAGDQSHSDIGKIEMFLEDL 1005
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 213/401 (53%), Gaps = 12/401 (2%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
L+ ++IN Y ++K A +F + P+V +N MISG +++F +MR+
Sbjct: 262 LAFVTVINTYISLGKLKDARLLFGEMP-SPDVVAWNVMISGHGKRGCEIVAIEYFLNMRK 320
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVK-KIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
V + T ++ ++A L++ +H KLGL ++Y+GS+LV+ Y KC+ ME
Sbjct: 321 SSVKSTRSTLGSVLSAI-GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A KVFE L R+ VLWNAM+ GYA GE HK +E+F M G + FT T +LS
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ + G H I++K + V NAL+DMY K + +A +IFE M ++D SWN+
Sbjct: 440 VSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNT 499
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
I+ + Q N LF RM S G D ++ L AC+++ L G+Q+H V G
Sbjct: 500 IIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCG 559
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L + + ++L+DMY+KCG + DA+ VF+ M + V S N +I GY +
Sbjct: 560 LDRV--------LHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL- 610
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+EA+ +F M + P E+TF ++ AC L+ G +F
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 249/493 (50%), Gaps = 18/493 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL + ++++ + A NL G +H+ ++ G+ + +SL++MYSKC +M+ A VF
Sbjct: 329 TLGSVLSAIGIVA---NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L E N +NAMI G+ N + K ++ F M+ G D +TF L+ C +
Sbjct: 386 EALE-ERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDL 444
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ H ++ K L ++++G+ALV+ Y KC +E+A ++FE + RD V WN ++ GY
Sbjct: 445 EMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGY 504
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q +A ++F RM+ GI + L A + G+ VH + VK G D +
Sbjct: 505 VQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVL 564
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
++LIDMY K + +A ++F M E + S N+++ + Q N + + LF ML+
Sbjct: 565 HTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTK 623
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G P +TF+T++ AC +L G Q HG I+ G + G ++ +L+ +Y
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGE-------YLGISLLGLYM 676
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
M +A +F+++S K + W M+ G+ +G +EAL + M PD+ TFV
Sbjct: 677 NSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFV 736
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--CVIDMLGRAGQLNEAYELALAM 507
VL CS L +GR L+ + + ++ T +IDM + G + + ++ M
Sbjct: 737 TVLRVCSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEM 793
Query: 508 PNEANPVVWRTLL 520
+N V W +L+
Sbjct: 794 RRRSNVVSWNSLI 806
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 218/475 (45%), Gaps = 47/475 (9%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ G+ +HS L GI +++++Y+KC Q+ YA FN+L E +V +N+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL--EKDVTAWNSMLS 133
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ S K L F + + + P+K+TF ++ V ++IH + K+GL+
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ Y G ALV+ Y KC + +A +VF+ + + V W + +GY + G +A+ VF RM
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
EG V++ I +G K+ R+
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARL------------------------------- 282
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+F M D+ +WN +++ H + G + F M + + T +VL A
Sbjct: 283 ----LFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIG 338
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+A L G +H + GLA N +++ ++L+ MY+KC M A VF + +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASN--------IYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++ WN MI GY +G+ + +++F M + D+ TF +LS C+ S L G +F
Sbjct: 391 RNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQF 450
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++ + + + ++DM + G L +A ++ M + N V W T++
Sbjct: 451 HSIIIKK-KLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDN-VSWNTIIGG 503
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 135/309 (43%), Gaps = 25/309 (8%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VH + +G DS + NA++D+Y K V A + F +E KD+ +WNS+++++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLSMYSS 137
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LR F + P+ TFS VL + + GRQIH ++ GL +N C
Sbjct: 138 IGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
AL+DMY KC + DAQ VF + + W + GY G +EA+ +F
Sbjct: 198 --------GGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVF 249
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +PD + FV V++ G L R M S P + + +I G+
Sbjct: 250 ERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGK 304
Query: 494 AGQLNEAYELALAMPNEANPVVWRTL---LAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
G A E L M + TL L+A + N DL + +L
Sbjct: 305 RGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG------- 357
Query: 551 VLMSNIYVA 559
L SNIYV
Sbjct: 358 -LASNIYVG 365
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 336/588 (57%), Gaps = 15/588 (2%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
A + L+KG+E+H +++ TG++D + I L+NMY+KC + A VF ++ + +V +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV-S 382
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N+MI+G N + ++ + MR+ +LP +T + C + ++IHG
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE-FHKAL 220
KLG+DL+V + +AL+ Y + ++ E K+F +P D V WN+++ A+ +A+
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
F + G ++R T + VLSA+ + F + G+ +HG+ +K NALI Y
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACY 562
Query: 281 GKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
GK + +IF M E +D +WNS+++ + L L ML G + D +
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+TVL A + +A L G ++H V L DV + +AL+DMY+KCG + A
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLE--------SDVVVGSALVDMYSKCGRLDYAL 674
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHS 458
F M ++ SWN MI GY GQG+EAL +F M + + PD VTFVGVLSACSH+
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G + M YG+ P IEH++C+ D+LGRAG+L++ + MP + N ++WRT
Sbjct: 735 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 519 LLAAS-RLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+L A R +G +L + AA+ +FQLEP + NYVL+ N+Y AGG++E+++ R M+
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V+K G SW+ +KDG+H F++ D+SHP+A IY +L L ++R+ G
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 22/490 (4%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++I + ++G++ + L++ ++K + YA VFN + N T N ++ G
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVR 286
Query: 112 NDFAFKGLDFFNHMRQL-GVLPDKY-----TFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ + F M + V P+ Y +FP + + + + +++HG V GL
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY--SLAEEVGLKKGREVHGHVITTGL 344
Query: 166 -DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
D V IG+ LVN Y KC + +A +VF + +D V WN+M+ G Q G F +A+E ++
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M + I FT+ LS+ + + K G+ +HG +K+G D V V NAL+ +Y +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ E +IF M E D SWNSI+ + + F AG + + +TFS+VL
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
A S L+ G+QIHG + N +A D+ NAL+ Y KCG M + +F+
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIA--------DEATTENALIACYGKCGEMDGCEKIFS 576
Query: 404 KMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+M+ ++D +WN MI GY + +ALD+ M + + D + VLSA + L
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G E + R + + + ++DM + G+L+ A MP N W ++++
Sbjct: 637 RGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISG 694
Query: 523 SRLHGNTDLA 532
HG + A
Sbjct: 695 YARHGQGEEA 704
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 234/481 (48%), Gaps = 27/481 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
HS + + + +LIN Y + A VF+ + N ++ ++SG+ N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNGE 82
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L F M + G+ ++Y F +++ C ++ + +L ++IHGL+FKL +D +
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 173 SALVNTYLKC-QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L++ Y KC + AL F ++ +++ V WN++++ Y+Q G+ A +F M +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGI---VVKMGYDSGVPVMNALIDMYGKGKCVGE 288
+ +T +++ + + R++ I + K G + + V + L+ + K +
Sbjct: 203 RPTEYTFGSLVTTACSLT-EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 289 ALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRL-FDRMLSAGFQPDLVTFSTVLP- 344
A ++F ME ++ + N +M V ++ G L + + M+ + ++ S+ P
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS-FPE 320
Query: 345 -ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMVF 402
+ + L GR++HG+++ GL +D V + N L++MY KCGS+ DA+ VF
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGL--------VDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
M+ KD SWN MI G +G EA++ + M + P T + LS+C+ +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 463 QGREFLPLMES-RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G++ ES + G+ + ++ + G LNE ++ +MP E + V W +++
Sbjct: 433 LGQQIHG--ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIG 489
Query: 522 A 522
A
Sbjct: 490 A 490
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 224/488 (45%), Gaps = 33/488 (6%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCC-QMKYALFVFNNLSCEPNVFTYNAMISGF 109
G++IH M + + LI+MY KC + YAL F ++ + N ++N++IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSVSWNSIISVY 181
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA--VLEVKKIHGLVFKLGLDL 167
F+ M+ G P +YTF L+ C + V +++I + K GL
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+++GS LV+ + K + A KVF ++ R+ V N ++ G + +A ++F M+
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 228 KEGIWMSRFTVTGVLSALIMMGF----------FKNGRVVHGIVVKMG-YDSGVPVMNAL 276
S V+ +++ F K GR VHG V+ G D V + N L
Sbjct: 302 ------SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++MY K + +A +F M +KD SWNS++T +Q G + + M P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T + L +C+ L G+QIHG + G+ N V ++NALM +Y + G +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN--------VSVSNALMTLYAETGYLN 467
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQG-KEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ + +F+ M + D SWN +I + EA+ F A K + +TF VLSA
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 456 SHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
S F G++ L +++ T E+ +I G+ G+++ ++ M + V
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 515 VWRTLLAA 522
W ++++
Sbjct: 586 TWNSMISG 593
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 6/326 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I+SL CA + GQ+IH L+ G ID +S++ +L+ +Y++ + +F++
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 93 LSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E + ++N++I ++ + + + F + ++ G ++ TF ++ +
Sbjct: 476 MP-EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGY 210
K+IHGL K + + +AL+ Y KC M+ K+F + RD V WN+M++GY
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
KAL++ M + G + F VLSA + + G VH V+ +S V
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LS 329
V +AL+DMY K + AL F M ++ +SWNS+++ + + G + L+LF+ M L
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
PD VTF VL ACSH L G
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F AT +++ A L++G E+H+ +R + + ++L++MYSKC ++ YAL
Sbjct: 620 FMYATVLSAF---ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVM 148
FN + N +++N+MISG+ + + L F M+ G PD TF ++ C
Sbjct: 677 FNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
+ E K + GL + S + + + +++ E++P++ +V++W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 207 V------NGY-AQIGEFHKALEVFRRMSKE 229
+ NG A++G+ KA E+ ++ E
Sbjct: 796 LGACCRANGRKAELGK--KAAEMLFQLEPE 823
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 318/568 (55%), Gaps = 10/568 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G++IH+Y+LR G + LI+ Y+KC ++K +F+ + + N
Sbjct: 237 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-N 295
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ MISG+ N F ++ + F M +LG PD + ++ C A+ + +++H
Sbjct: 296 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHA 355
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K L+ D ++ + L++ Y K + +A KVF+ + ++V+ +NAM+ GY+ + +
Sbjct: 356 YTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 415
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F M S T +L + + + +HG+++K G + +ALID
Sbjct: 416 ALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALID 475
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K V +A +FE M EKDI WN++ + Q ++ L+L+ + + +P+ T
Sbjct: 476 VYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFT 535
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ ++ A S+LA+L HG+Q H +V GL C F+ NAL+DMY KCGS+ +A
Sbjct: 536 FAALITAASNLASLRHGQQFHNQLVKMGL---DFCP-----FVTNALVDMYAKCGSIEEA 587
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F +DV WN MI + G+ +EAL MF M + ++P+ VTFV VLSACSH+
Sbjct: 588 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 647
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G M +G+ P EHY CV+ +LGR+G+L EA E MP E +VWR+
Sbjct: 648 GRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 706
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ GN +L + AA+ +P G+Y+L+SNI+ + G + +V +R M V
Sbjct: 707 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 766
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEA 606
K PG SWIE+ + ++ FI+ D +H EA
Sbjct: 767 VKEPGRSWIEVNNKVNVFIARDTTHREA 794
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 249/483 (51%), Gaps = 12/483 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQL + + + IH ++ +G+ LIN+ SK ++ A VF+ + N
Sbjct: 34 LQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP-HKN 92
Query: 99 VFTYNAMISGFYSNDFAFKGL-DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+++M+S + ++ + L F + R+ G P+++ +I+ C + V + ++H
Sbjct: 93 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 152
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V + G D DVY+G++L++ Y K +EEA VF++L + V W ++ GY + G
Sbjct: 153 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 212
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+LE+F +M + + R+ V+ VLSA M+ F + G+ +H V++ G + V V+N LI
Sbjct: 213 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 272
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D Y K V ++F+ M K+I SW ++++ + Q ++LF M G++PD
Sbjct: 273 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 332
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
++VL +C AL GRQ+H Y + L D F+ N L+DMY K + D
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLE--------SDEFVKNGLIDMYAKSNLLID 384
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF M++++V S+N MI GY + EAL++F M P +TFV +L +
Sbjct: 385 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSAS 444
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L ++ L+ ++GV + + +ID+ + + +A + M NE + VVW
Sbjct: 445 LFALELSKQIHGLI-IKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM-NEKDIVVWN 502
Query: 518 TLL 520
+
Sbjct: 503 AMF 505
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 180/322 (55%), Gaps = 1/322 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C + L C + L++G+++H+Y ++ + LI+MY+K + A VF+ +
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 392
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E NV +YNAMI G+ S + + L+ F+ MR P TF L+ + A+
Sbjct: 393 A-EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 451
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IHGL+ K G+ LD++ GSAL++ Y KC ++++A VFEE+ +D+V+WNAM GY Q
Sbjct: 452 KQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 511
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
E +AL+++ + + FT +++A + ++G+ H +VKMG D V
Sbjct: 512 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 571
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+DMY K + EA ++F +D+ WNS+++ H Q G + L +F M+ G Q
Sbjct: 572 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 631
Query: 334 PDLVTFSTVLPACSHLAALMHG 355
P+ VTF VL ACSH + G
Sbjct: 632 PNYVTFVAVLSACSHAGRVEDG 653
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 172/336 (51%), Gaps = 9/336 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P + F L++ ++ K IHG + GL D ++ + L+N K ++ A V
Sbjct: 25 PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGF 250
F+++P ++++ W++MV+ Y+Q G +AL VF + K G + F + V+ A +G
Sbjct: 85 FDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGV 144
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +HG VV+ G+D V V +LID Y K + EA +F+ + EK +W +I+
Sbjct: 145 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 204
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ +CG +L LF +M PD S+VL ACS L L G+QIH Y++ G
Sbjct: 205 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM- 263
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + N L+D YTKC ++ + +F +M K++ SW MI GY + EA+
Sbjct: 264 -------DVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 316
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+F M KPD VL++C L QGR+
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 149/292 (51%), Gaps = 8/292 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P +L T ++ L + A L+ ++IH +++ G+ + ++LI++YSKC +K A
Sbjct: 429 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARH 488
Query: 89 VFNNLSCEPNVFTYNAMISGF---YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
VF ++ E ++ +NAM G+ N+ A K RQ P+++TF LI
Sbjct: 489 VFEEMN-EKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ---KPNEFTFAALITAAS 544
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
++ ++ ++ H + K+GLD ++ +ALV+ Y KC +EEA K+F RDVV WN+
Sbjct: 545 NLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNS 604
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++ +AQ GE +AL +FR M KEGI + T VLSA G ++G + G
Sbjct: 605 MISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFG 664
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
G ++ + G+ + EA E E M E W S+++ GN
Sbjct: 665 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGN 716
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P F+ +L ++H + IHG I+V+GL D F+ N L+++ +K
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQ--------SDTFLANILINVCSK 74
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVG 450
+ +A++VF KM K++ +W+ M+ Y G +EAL +F ++ P+E
Sbjct: 75 SDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLAS 134
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
V+ AC+ G + +G + + R G + T +ID + G + EA L +E
Sbjct: 135 VIRACTQLGVVEKGAQLHGFV-VRSGFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSE 192
Query: 511 ANPVVWRTLLA 521
V W T++A
Sbjct: 193 KTAVTWTTIIA 203
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 13 SCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS 72
S FS N+ FT A I + ++ +L+ GQ+ H+ +++ G+ P +
Sbjct: 522 STLQFSRQKPNE-----FTFAALITA---ASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 573
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L++MY+KC ++ A +FN+ S +V +N+MIS + A + L F M + G+ P
Sbjct: 574 LVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP 632
Query: 133 DKYTFPCLIKCC 144
+ TF ++ C
Sbjct: 633 NYVTFVAVLSAC 644
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 362 bits (928), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 189/588 (32%), Positives = 323/588 (54%), Gaps = 11/588 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + Q G+EIH ++L+ G+ +L+ MY +C ++YA VF+ + E +
Sbjct: 101 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM-MERD 159
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +++ MI N L+ M + V P + ++ D + K +H
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 159 LVFKLGLD--LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
V + + + V +AL++ Y KC + A ++F L + VV W AM+ G +
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ ++F RM +E I+ + T+ ++ G + G+ +H +++ G+ + + AL
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK + A +F+ + +D+ W ++++ + Q D LFD+M ++G +P
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 399
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT ++L C+ AL G+ +H YI + D +N AL+DMY KCG +
Sbjct: 400 VTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV--------DCILNTALVDMYAKCGDIN 451
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A +F + +D+ WN +I G+ M G G+EALD+F+ M +KP+++TF+G+L ACS
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G +++G++ M +G+VP IEHY C++D+LGRAG L+EA+E+ +MP + N +VW
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVW 571
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L+AA RLH N L E+AA ++ ++EP +CG VLMSNIY A ++ + +R TM+
Sbjct: 572 GALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTV 631
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K PG S IE+ +H F+ D+SHP+ + I L + +L E G
Sbjct: 632 GMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAG 679
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 199/395 (50%), Gaps = 12/395 (3%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ P ++K C V K+IHG V K GLD DV++G+AL+ Y +C +E A VF++
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ RDVV W+ M+ ++ EF ALE+ R M+ + S + +++ + G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 255 RVVHGIVVKMGYDS--GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
+ +H V++ + GVP AL+DMY K +G A ++F + +K + SW +++
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ + +LF RM P+ +T +++ C AL G+Q+H YI+ NG + +
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS-- 332
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+ + AL+DMY KC +R+A+ +F +DV W M+ Y +A ++
Sbjct: 333 ------LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNL 386
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M + ++P +VT V +LS C+ +G L G+ ++ V I + T ++DM
Sbjct: 387 FDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN-TALVDMYA 445
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G +N A L + + + +W ++ +HG
Sbjct: 446 KCGDINAAGRLFIEAISR-DICMWNAIITGFAMHG 479
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
MLS ++ N FN +T T T ++ L LCA L G+ +HSY+ +
Sbjct: 370 MLSAYAQANCIDQAFNLFDQM--RTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 427
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
+ + T+L++MY+KC + A +F + ++ +NA+I+GF + + + LD
Sbjct: 428 ERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEEALD 486
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTY 179
F M + GV P+ TF L+ C V E KK+ +V GL + +V+
Sbjct: 487 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 546
Query: 180 LKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ ++EA ++ + +P++ + ++W A+V
Sbjct: 547 GRAGLLDEAHEMIKSMPIKPNTIVWGALV 575
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 195/586 (33%), Positives = 325/586 (55%), Gaps = 10/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G++IH+Y+LR G + LI+ Y+KC ++K +F+ + + N
Sbjct: 145 LSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK-N 203
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ MISG+ N F ++ + F M +LG PD + ++ C + A+ + +++H
Sbjct: 204 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHA 263
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K L+ + ++ + L++ Y K + +A KVF+ + ++V+ +NAM+ GY+ + +
Sbjct: 264 YTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSE 323
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F M S T +L + + + +HG+++K G + +ALID
Sbjct: 324 ALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALID 383
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K V +A +FE M EKDI WN++ + Q ++ L+L+ + + +P+ T
Sbjct: 384 VYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFT 443
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ ++ A S+LA+L HG+Q H +V GL C F+ NAL+DMY KCGS+ +A
Sbjct: 444 FAALITAASNLASLRHGQQFHNQLVKMGL---DFCP-----FVTNALVDMYAKCGSIEEA 495
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F +DV WN MI + G+ +EAL MF M + ++P+ VTFV VLSACSH+
Sbjct: 496 RKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 555
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G M +G+ P EHY CV+ +LGR+G+L EA E MP E +VWR+
Sbjct: 556 GXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 614
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ GN +L + AA+ +P G+Y+L+SNI+ + G + +V +R M V
Sbjct: 615 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEV 674
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PG SWIE+ + ++ FI+ +H EA I + L L ++ G
Sbjct: 675 VKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAG 720
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/511 (29%), Positives = 273/511 (53%), Gaps = 24/511 (4%)
Query: 28 HP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
HP F LA+ I + C ++KG ++H +++R+G TSLI+ YSK ++
Sbjct: 34 HPNEFVLASVI---RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEV 90
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ L E T+ +I+G+ + L+ F MR+ V+PD+Y ++ C
Sbjct: 91 ARLVFDQL-LEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACS 149
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + K+IH V + G ++DV + + L++ Y KC ++ K+F+++ +++++ W
Sbjct: 150 MLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTT 209
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++GY Q +A+++F M++ G F T VL++ + + GR VH +K
Sbjct: 210 MISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKAN 269
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+S V N LIDMY K + +A ++F++M E+++ S+N+++ + L LF
Sbjct: 270 LESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFH 329
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M F P L+TF ++L + L AL +QIHG I+ G++ D+F +AL
Sbjct: 330 EMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL--------DLFAGSAL 381
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+D+Y+KC ++DA+ VF +M++KD+ WN M GY + +EAL ++S + ++ KP+E
Sbjct: 382 IDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNE 441
Query: 446 VTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
TF +++A S+ L G++F L++ P + + ++DM + G + EA +
Sbjct: 442 FTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARK-- 497
Query: 505 LAMPNEA---NPVVWRTLLAASRLHGNTDLA 532
M N + + V W ++++ HG + A
Sbjct: 498 --MFNSSIWRDVVCWNSMISTHAQHGEAEEA 526
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 180/322 (55%), Gaps = 1/322 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C + L C L++G+++H+Y ++ + + LI+MY+K + A VF+ +
Sbjct: 241 ACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVM 300
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E NV +YNAMI G+ S + + L+ F+ MR P TF L+ + A+
Sbjct: 301 A-EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 359
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IHGL+ K G+ LD++ GSAL++ Y KC ++++A VFEE+ +D+V+WNAM GY Q
Sbjct: 360 KQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQH 419
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
E +AL+++ + + FT +++A + ++G+ H +VKMG D V
Sbjct: 420 LENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVT 479
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+DMY K + EA ++F +D+ WNS+++ H Q G + L +F M+ G Q
Sbjct: 480 NALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQ 539
Query: 334 PDLVTFSTVLPACSHLAALMHG 355
P+ VTF VL ACSH + G
Sbjct: 540 PNYVTFVAVLSACSHAGXVEDG 561
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 208/400 (52%), Gaps = 10/400 (2%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F + R+ G P+++ +I+ C + V + ++HG V + G D DVY+G++L++ Y
Sbjct: 24 FVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYS 83
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
K +E A VF++L + V W ++ GY + G +LE+F +M + + R+ V+
Sbjct: 84 KNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSS 143
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VLSA M+ F + G+ +H V++ G + V V+N LID Y K V ++F+ M K+
Sbjct: 144 VLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKN 203
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
I SW ++++ + Q ++LF M G++PD ++VL +C L AL GRQ+H
Sbjct: 204 IISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHA 263
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y + L N F+ N L+DMY K + DA+ VF M++++V S+N MI GY
Sbjct: 264 YTIKANLESNE--------FVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGY 315
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+ EAL++F M P +TFV +L + L ++ L+ + GV
Sbjct: 316 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLI-IKXGVSLD 374
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ + +ID+ + + +A + M NE + VVW +
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEM-NEKDIVVWNAMF 413
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 311/541 (57%), Gaps = 18/541 (3%)
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFN--------HMRQLGVLPDKYTFPCLIKCCC 145
S +F ++S F SN + + HM G+ + + ++ C
Sbjct: 10 STHKAIFQKPRLLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECL 69
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
A+ E +++H + K VY+ + L+ Y+KC + +A VF+ +P R+VV W A
Sbjct: 70 RKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTA 129
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++ Y+Q G +AL +F +M + G + FT VL++ I F GR +H ++K+
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
Y++ V V ++L+DMY K + EA IF+ + E+D+ S +I++ + Q G + L LF
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
R+ G Q + VT+++VL A S LAAL HG+Q+H +++ + + V + N+L
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSY--------VVLQNSL 301
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC-EAKLKPD 444
+DMY+KCG++ A+ +F + ++ V SWN M++GY G+G+E L++F+ M E K+KPD
Sbjct: 302 IDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPD 361
Query: 445 EVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
VT + VLS CSH G +G + F + + V P +HY CV+DMLGRAG++ A+E
Sbjct: 362 SVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEF 421
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP E + +W LL A +H N D+ E ++ Q+EP + GNYV++SN+Y + G++
Sbjct: 422 VKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRW 481
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
E+V +R+ M ++ V K PG SWIEL LHTF +SD SHP + + A++ L+AR +E
Sbjct: 482 EDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEA 541
Query: 624 G 624
G
Sbjct: 542 G 542
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 174/311 (55%), Gaps = 2/311 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C + +++GQ +H++M++T + T LI Y KC ++ A VF+ + E N
Sbjct: 65 LNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP-ERN 123
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ AMIS + +A + L F M + G P+++TF ++ C + ++IH
Sbjct: 124 VVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHS 183
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KL + VY+GS+L++ Y K + EA +F+ LP RDVV A+++GYAQ+G +
Sbjct: 184 HIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEE 243
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+FRR+ +EG+ + T T VL+AL + +G+ VH +++ S V + N+LID
Sbjct: 244 ALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLID 303
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLV 337
MY K + A IF+ + E+ + SWN+++ + + G L LF+ M+ +PD V
Sbjct: 304 MYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSV 363
Query: 338 TFSTVLPACSH 348
T VL CSH
Sbjct: 364 TVLAVLSGCSH 374
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 192/555 (34%), Positives = 311/555 (56%), Gaps = 10/555 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C + + G+ +H +++ G D + SL++MY+K ++ A VF+ + E
Sbjct: 129 ALKACVRSADFRYGRRLHCDVVKAGGADG-FVMNSLVDMYAKAGDLENARKVFDRVP-ER 186
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ +M+SG N A +GL FN MRQ V P +YT ++ C + + + + IH
Sbjct: 187 NVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIH 246
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K GL + +I ++L++ Y KC+ +E+A +VF+EL D+VLW AM+ GY Q
Sbjct: 247 GSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPL 306
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL++F I + T+ V+SA + GR VH I VK+G V NAL+
Sbjct: 307 DALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALV 366
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + + EA IF + KD+ +WNS+M + + G + +L LF+RM G PD +
Sbjct: 367 DMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAI 426
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ L AC LA L G+ H Y + N +++N AL+++Y+KC +
Sbjct: 427 SVVNALSACVCLADLHIGKGFHTYAIKYAFMSN--------IYVNTALLNLYSKCADLPS 478
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ VF M+ ++ +W+ MI GYGM G ++D+F+ M + + P+EV F +LSACSH
Sbjct: 479 AQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSH 538
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G ++ G+E+ M + + P+++HY C++D++ RAG L EA E MP +A VW
Sbjct: 539 TGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWG 598
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+ L +LH + E A +++ L P YVLMSN+Y + G++++ IR M++Q
Sbjct: 599 SFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQG 658
Query: 578 VRKNPGCSWIELKDG 592
+ K PGCS + ++G
Sbjct: 659 LVKLPGCSSVGHENG 673
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 213/434 (49%), Gaps = 26/434 (5%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
HP + T ++ L CA L +G+ IH +++ G+ + SL++MY+KC +++ A
Sbjct: 220 HP-SEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDAR 278
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ L ++ + AMI G+ N L F H + + ++P+ T +I +
Sbjct: 279 RVFDELEFV-DIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQL 337
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + +H + KLG + +ALV+ Y KCQ + EA +F + ++DVV WN+M+
Sbjct: 338 RHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMM 397
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY++ G +++L +F RM +GI +V LSA + + G+ H +K +
Sbjct: 398 AGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFM 457
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V AL+++Y K + A +F M +++ +W++++ + G+ G++ LF+ M
Sbjct: 458 SNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEM 517
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQ----IHGYIVVNGLAKNGSCKDIDDVFMNN 383
L P+ V F+++L ACSH + G++ + + + K+ +C
Sbjct: 518 LKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYAC---------- 567
Query: 384 ALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQ---GKEALDMFSCMCEA 439
++D+ + G++ +A M K ++ W + G + + G+EA+ A
Sbjct: 568 -MVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKM-----A 621
Query: 440 KLKPDEVTFVGVLS 453
L P+ F ++S
Sbjct: 622 ALHPETPDFYVLMS 635
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL---FDRMLSAGF 332
L+ Y + A + + D +++ ++ G+H + L R A
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
Q D+V S L AC A +GR++H +V G A D F+ N+L+DMY K
Sbjct: 121 QADVV-LSLALKACVRSADFRYGRRLHCDVVKAGGA---------DGFVMNSLVDMYAKA 170
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + +A+ VF ++ +++V SW M+ G +G +E L +F+ M + + P E T V VL
Sbjct: 171 GDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVL 230
Query: 453 SACSHSGFLSQGR 465
+AC+ G L QGR
Sbjct: 231 AACAMLGGLHQGR 243
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 329/627 (52%), Gaps = 41/627 (6%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS ++ +N P + +L + + +++ ++I + M TGII ++ +I
Sbjct: 139 FSFTTNKPKWNSPTNVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAF 198
Query: 77 --YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
+ + YA +FN + +PN F +N MI G+ + FF +M QL V D
Sbjct: 199 CALAHSGDLHYAHTIFNRVE-QPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDS 257
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+F +K C V E + ++ +V+K+G D ++ + + L++ Y + ++ A +VF+E
Sbjct: 258 RSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDE 317
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+DVV W M++GYA +A+EVF M + + T+ V+SA MG + G
Sbjct: 318 SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG 377
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH V + + + NAL+DMY K C+ +A E+F+ M KD++SW S++ + +C
Sbjct: 378 KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKC 437
Query: 315 GNHDGTLRLFDR-------------------------------MLSAGFQPDLVTFSTVL 343
G+ + R FD+ M+ G P T +VL
Sbjct: 438 GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVL 497
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC L L G IH Y VV + V + NA++DMY KCGS+ A VF+
Sbjct: 498 SACGQLTCLNLGDWIHQYFVVGKIIP-------LSVTLENAIVDMYAKCGSIDAATEVFS 550
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
M ++++ SWN MI GY +G+ K+A+++F M +P+ +TFV +L+ACSH G +S+
Sbjct: 551 TMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISE 610
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
GRE+ ME +YG+ P HY C++D+LGR G L EAY+L MP + W LL A
Sbjct: 611 GREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNAC 670
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R+HGN +LA ++A + +L+P G YVL++N K+ +V +R M+ + V+K PG
Sbjct: 671 RMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPG 730
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIY 610
S IE+ G F+ +D SHP+++ IY
Sbjct: 731 YSLIEIDGGFVEFLVADESHPQSEEIY 757
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 321/571 (56%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH+ + G + T+LI+ YS C + +A VF+ + + V T+ AM+S + ND
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAV-TWTAMVSCYSEND 228
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L+ F+ MR G P+ + +K + + L K IHG K D + ++G
Sbjct: 229 IPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGG 288
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y KC +E+A +FE +P DV+LW+ +++ YAQ + +A E+F RM + +
Sbjct: 289 ALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP 348
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ F+++GVL A + F + G +H + +K+GY+S + V NAL+DMY K + + +LEIF
Sbjct: 349 NEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIF 408
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+++ + SWN+I+ + Q G + L +F M +A VTFS+VL AC++ +++
Sbjct: 409 SSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIK 468
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
H QIH I + +D + N+L+D Y KCG +RDA VF + + DV SW
Sbjct: 469 HAVQIHSLIEKSTFN--------NDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSW 520
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I Y + G+ AL++F M ++ +K ++VTFV +LS C +G ++QG M
Sbjct: 521 NSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMM 580
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ + P++EHYTC++ +LGRAG+L +A + +P+ +P+VWR LL++ +H N L
Sbjct: 581 DHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGR 640
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
AA++V +EP YVL+SN+Y A G +EV R +MR V+K G SW+E+K +
Sbjct: 641 YAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEV 700
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ + I A L L + G
Sbjct: 701 HAFSVGSADHPDMRIINAMLEWLNLKASREG 731
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 244/496 (49%), Gaps = 13/496 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS--PLSITSLINMYSKCCQMKYALFVFN 91
C LQ C + + + G+ +H+ +++ G + L+N Y+K + A +F+
Sbjct: 47 ACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFD 106
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E N ++ ++ G+ + L+ F +++ G + + ++K + A
Sbjct: 107 GMP-ERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPG 165
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
IH KLG D + ++G+AL++ Y C + A VF+ + +D V W AMV+ Y+
Sbjct: 166 LACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYS 225
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ AL F +M G + F +T L A + + G+ +HG VK YD+
Sbjct: 226 ENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPH 285
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMY K + +A IFEM+ D+ W+ +++ + Q ++ +F RM+ +
Sbjct: 286 VGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSF 345
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ + S VL AC+++A L G QIH + G ++F+ NALMDMY K
Sbjct: 346 VVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYES--------ELFVGNALMDMYAK 397
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C +M ++ +F+ + + SWN +I+GY G ++AL +F M A + +VTF V
Sbjct: 398 CRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSV 457
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+++ + + L+E TI +ID + G + +A ++ ++ E
Sbjct: 458 LRACANTSSIKHAVQIHSLIEKSTFNNDTIV-CNSLIDTYAKCGFIRDALKVFESIV-EC 515
Query: 512 NPVVWRTLLAASRLHG 527
+ V W ++++A LHG
Sbjct: 516 DVVSWNSIISAYALHG 531
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 173/320 (54%), Gaps = 6/320 (1%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF L + + + +C L KG IH ++T P +L++MY+KC ++ A
Sbjct: 248 NPFVLTSALKA-AVCLSSALLGKG--IHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAH 304
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F + +V ++ +IS + + + + F M + V+P++++ +++ C ++
Sbjct: 305 AIFEMIP-HDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363
Query: 148 MAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
A LE+ ++IH L KLG + ++++G+AL++ Y KC+ ME +L++F L + V WN +
Sbjct: 364 -AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTI 422
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ GY Q G AL VF M + ++ T + VL A K+ +H ++ K +
Sbjct: 423 IVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTF 482
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
++ V N+LID Y K + +AL++FE + E D+ SWNSI++ + G L LFDR
Sbjct: 483 NNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDR 542
Query: 327 MLSAGFQPDLVTFSTVLPAC 346
M + + + VTF ++L C
Sbjct: 543 MNKSDIKANDVTFVSLLSVC 562
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 1/216 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ CA+ L+ G++IH+ ++ G +L++MY+KC M+ +L +F++L + N
Sbjct: 357 LQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQ-DAN 415
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++N +I G+ + FA L F+ MR +L + TF +++ C + ++ +IH
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L+ K + D + ++L++TY KC F+ +ALKVFE + DVV WN++++ YA G
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATN 535
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
ALE+F RM+K I + T +LS G G
Sbjct: 536 ALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQG 571
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/597 (33%), Positives = 344/597 (57%), Gaps = 20/597 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+C+ L++C + G+++H ++ G ++ TSL++MY K ++ VF+ +
Sbjct: 96 SCV--LKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM 153
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ NV ++ ++++G+ N + L F+ M+ G+ P+ +TF ++ AV +
Sbjct: 154 RVK-NVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKG 212
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H +V K GLD +++G+++VN Y K + +A VF+ + R+ V WN+M+ G+
Sbjct: 213 VQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTN 272
Query: 214 GEFHKALEVFRRMSKEGIWMSRF---TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G +A E+F RM EG+ +++ TV + + + M F K +H V+K G D +
Sbjct: 273 GLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQ---LHCQVIKNGSDFDL 329
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRML- 328
+ AL+ Y K + +A ++F MM +++ SW +I++ + Q G D + LF +M
Sbjct: 330 NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 329 SAGFQPDLVTFSTVLPACSH-LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +P+ TFS+VL AC+ A++ G+Q H + +G + N C +++AL+
Sbjct: 390 EEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFS-NALC-------VSSALVT 441
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G++ A VF + +D+ SWN MI GY G GK++L +F M L+ D +T
Sbjct: 442 MYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGIT 501
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GV+SAC+H+G +++G+ + LM Y +VPT+EHY+C++D+ RAG L +A +L M
Sbjct: 502 FIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P A +WRTLLAA R+H N L E+AA+++ L+P YVL+SNIY G ++E
Sbjct: 562 PFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERA 621
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M + V+K G SWIE+K+ +F++ D SHP++ IY +L L+ RL++ G
Sbjct: 622 KVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAG 678
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 225/428 (52%), Gaps = 13/428 (3%)
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
N ++ F ND + L+ F +R+ G D + C++K C + + K++H K
Sbjct: 61 NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIK 120
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
G DV +G++LV+ Y+K + +E+ +VF+E+ +++VV W +++ GY Q G +AL++
Sbjct: 121 CGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKL 180
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M EGI + FT VL L G + G VH +V+K G DS + V N++++MY K
Sbjct: 181 FSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSK 240
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
V +A +F+ ME ++ SWNS++ G LF RM G + F+TV
Sbjct: 241 SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATV 300
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+ C+++ + +Q+H ++ KNGS D++ + ALM Y+KC + DA +F
Sbjct: 301 IKLCANIKEMSFAKQLHCQVI-----KNGSDFDLN---IKTALMVAYSKCSEIDDAFKLF 352
Query: 403 TKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSH-SG 459
M ++V SW +I GY +G+ A+++F M E ++P+E TF VL+AC+ +
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTA 412
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ QG++F + G + + ++ M + G + A E+ + + V W ++
Sbjct: 413 SVEQGKQFHSC-SIKSGFSNALCVSSALVTMYAKRGNIESANEV-FKRQVDRDLVSWNSM 470
Query: 520 LAASRLHG 527
++ HG
Sbjct: 471 ISGYAQHG 478
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 361 bits (927), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 323/593 (54%), Gaps = 11/593 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L+ C+ L+ G+ IH ++ + I + ++LI +YSKC QM A+ VF
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEY 166
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V + ++I+G+ N L FF+ M L V PD T C +
Sbjct: 167 P-KQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNL 225
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +HG V + G D + + ++++N Y K + A +F E+P +D++ W++MV YA
Sbjct: 226 GRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYAD 285
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G AL +F M + I ++R TV L A + G+ +H + V G++ + V
Sbjct: 286 NGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITV 345
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+DMY K A+++F M +KD+ SW + + + + G +L +F MLS G
Sbjct: 346 STALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGT 405
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD + +L A S L + +H ++ +G N F+ +L+++Y KC
Sbjct: 406 RPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNE--------FIGASLIELYAKC 457
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGV 451
S+ +A VF M +KDV +W+ +I YG GQG+EAL +F M + +KP++VTFV +
Sbjct: 458 SSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSI 517
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSH+G + +G + +M + Y ++P EHY ++D+LGR G+L++A ++ MP +A
Sbjct: 518 LSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQA 577
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
P VW LL A R+H N + E+AA +F L+P H G Y L+SNIY + + +R
Sbjct: 578 GPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRT 637
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ +K G S +E+K+ +H+FI+SDR H E+ IY L L AR++E G
Sbjct: 638 LIKENRFKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYGMLRKLDARMKEEG 690
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 239/484 (49%), Gaps = 15/484 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
++HS L+ G+ +T L +Y++ + +A +F C+ V+ +NA++ ++
Sbjct: 22 QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCK-TVYLWNALLRSYFLE 80
Query: 113 DFAFKGLDFFNHMRQLGVL---PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ L F+ M + PD YT +K C + + K IHG + K +D D+
Sbjct: 81 GKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDM 140
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK- 228
++GSAL+ Y KC M +A+KVF E P +DVVLW +++ GY Q G AL F RM
Sbjct: 141 FVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVL 200
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
E + T+ SA + F GR VHG V + G+D+ + + N+++++YGK +
Sbjct: 201 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRS 260
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F M KDI SW+S++ + G L LF+ M+ + + VT + L AC+
Sbjct: 261 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 320
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
+ L G+ IH V G D+ ++ ALMDMY KC S ++A +F +M KK
Sbjct: 321 SSNLEEGKHIHKLAVNYGFEL--------DITVSTALMDMYMKCFSPKNAIDLFNRMPKK 372
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DV SW ++ GY G ++L +F M +PD + V +L+A S G + Q L
Sbjct: 373 DVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQAL-CL 431
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
S+ G +I++ + ++ A ++ M + V W +++AA HG
Sbjct: 432 HAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGM-RRKDVVTWSSIIAAYGFHGQ 490
Query: 529 TDLA 532
+ A
Sbjct: 491 GEEA 494
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 200/386 (51%), Gaps = 17/386 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ CC + + + ++H K+GL D ++ + L Y + + A K+FEE P +
Sbjct: 10 LLETCC---SKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKT 66
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR---FTVTGVLSALIMMGFFKNGRV 256
V LWNA++ Y G++ + L +F +M+ + I R +TV+ L + + + G++
Sbjct: 67 VYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKM 126
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+HG + K D+ + V +ALI++Y K + +A+++F ++D+ W SI+T +EQ G+
Sbjct: 127 IHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGS 186
Query: 317 HDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ L F RM+ PD VT + AC+ L+ GR +HG++ G
Sbjct: 187 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK----- 241
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ + N+++++Y K GS+R A +F +M KD+ SW+ M+ Y +G AL++F+
Sbjct: 242 ---LCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNE 298
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + +++ + VT + L AC+ S L +G+ L YG I T ++DM +
Sbjct: 299 MIDKRIELNRVTVISALRACASSSNLEEGKHIHKL-AVNYGFELDITVSTALMDMYMKCF 357
Query: 496 QLNEAYELALAMPNEANPVVWRTLLA 521
A +L MP + + V W L +
Sbjct: 358 SPKNAIDLFNRMPKK-DVVSWAVLFS 382
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 209/588 (35%), Positives = 317/588 (53%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G+E+H+++LR G+ + +L+ MY+KC ++ A VF+ +S +
Sbjct: 202 LRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLT-D 260
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F HM + V P+ T + + + K+IH
Sbjct: 261 CISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHA 320
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G DV ++L+ Y M EA VF + RD + W AM++GY + G K
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDK 380
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + TV L+A +G G +H + G+ + V NAL++
Sbjct: 381 ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVE 440
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLSAGFQPDL 336
MY K K + +A+E+F+ M +KD+ SW+S++ C NH L F ML A +P+
Sbjct: 441 MYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGF--CFNHKNFEALYYFRHML-ADVKPNS 497
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF L AC+ +L G++IH +++ G+A G ++ NAL+D+Y KCG
Sbjct: 498 VTFIAALAACAATGSLRCGKEIHAHVLRQGIASEG--------YVPNALLDLYVKCGQTG 549
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A F KDV SWNIM+ G+ G G AL F+ M E PDEVTFV +L CS
Sbjct: 550 YAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+G +SQG E M +Y +VP ++HY C++D+L R G+L E Y MP + VW
Sbjct: 610 RAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVW 669
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL R+H N +L E+AA+ V +LEP G +VL+S++Y G + EV +R TMR +
Sbjct: 670 GALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVK 729
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + GCSW+E+K +H F++ D SHP+ K I L + R++ G
Sbjct: 730 GLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASG 777
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 235/461 (50%), Gaps = 12/461 (2%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
++++M + + +A VF + E +VF++N M+ G+ F + LD ++ M G
Sbjct: 134 AMLSMLVRFGETWHAWKVFAKMP-ERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD YTFPC+++ C V + +++H V + GL ++V + +ALV Y KC +E A KV
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+ + L D + WNAM+ G+ + E LE+F M ++ + + T+T V A ++
Sbjct: 253 FDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDL 312
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ +H + VK G+ + V N+LI MY +GEA +F ME +D SW ++++ +
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
E+ G D L ++ M PD VT ++ L AC+ L L G ++H G
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF---- 428
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
I + + NAL++MY K + A VF M KDV SW+ MI G+ + + EAL
Sbjct: 429 ----IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALY 484
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M A +KP+ VTF+ L+AC+ +G L G+E + R G+ ++D+
Sbjct: 485 YFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHAHV-LRQGIASEGYVPNALLDLY 542
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ GQ A+ + V W +LA HG+ D+A
Sbjct: 543 VKCGQTGYAWA-QFGAHGTKDVVSWNIMLAGFVAHGHGDIA 582
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 10/352 (2%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+A+++ ++ A KVF ++P RDV WN MV GY + G +AL+++ RM G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+T VL + + GR VH V++ G V V+NAL+ MY K V A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ M D SWN+++ H + + L LF ML +P+L+T ++V A L+
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L ++IH V G A DV N+L+ MY+ G M +A VF++M +D
Sbjct: 311 DLDFAKEIHALAVKRGFAT--------DVAFCNSLIQMYSSLGRMGEACTVFSRMETRDA 362
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW MI GY +G +AL++++ M + PD+VT L+AC+ G L G + L
Sbjct: 363 MSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHEL 422
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
S+ G + I +++M ++ + +A E+ MP++ + + W +++A
Sbjct: 423 ATSK-GFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDK-DVISWSSMIAG 472
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 16/267 (5%)
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
G+ + NA++ M + A ++F M E+D+FSWN ++ + + G + L L+ RML
Sbjct: 128 GLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRML 187
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
AG +PD+ TF VL +C + L GR++H +++ GL +V + NAL+ M
Sbjct: 188 WAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGV--------EVDVLNALVTM 239
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + A+ VF MS D SWN MI G+ + + + L++F M E +++P+ +T
Sbjct: 240 YAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTI 299
Query: 449 VGVLSACSHSGFLSQ---GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
V A SG LS +E L R G + +I M G++ EA +
Sbjct: 300 TSVTVA---SGLLSDLDFAKEIHALAVKR-GFATDVAFCNSLIQMYSSLGRMGEACTVFS 355
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLA 532
M + + W +++ +G D A
Sbjct: 356 RMETR-DAMSWTAMISGYEKNGFPDKA 381
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 14 CFNFSTSSGNQTFNHPFT-----LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
CFN F H T IA+L CA +L+ G+EIH+++LR GI
Sbjct: 474 CFNHKNFEALYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGY 533
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+L+++Y KC Q YA F + +V ++N M++GF ++ L FFN M +
Sbjct: 534 VPNALLDLYVKCGQTGYAWAQFGAHGTK-DVVSWNIMLAGFVAHGHGDIALSFFNEMLET 592
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G PD+ TF L+ C V + ++ H + K + ++ + +V+ + + E
Sbjct: 593 GEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTE 652
Query: 188 ALKVFEELPLR-DVVLWNAMVNG 209
+P+ D +W A++NG
Sbjct: 653 GYNFINRMPITPDAAVWGALLNG 675
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 333/593 (56%), Gaps = 12/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++L C + + G+EIH+ +L++ S L + +LI MY++C +M A +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ +V T+N++I G+ N + L+FF+ M G D+ + +I + +L
Sbjct: 346 MN-NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 404
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H V K G D ++ +G+ L++ Y KC + F + +D++ W ++ GYAQ
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ALE+FR ++K+ + + + +L A ++ + +H +++ G V +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 523
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+D+YGK + +G A +FE ++ KD+ SW S+++ GN + LF RM+ G
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V +L A + L+AL GR+IH Y++ G GS + A++DMY C
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS--------IAVAVVDMYACC 635
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ A+ VF ++ +K + + MI YGM G GK A+++F M + PD ++F+ +L
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACSH+G L +GR FL +ME Y + P EHY C++DMLGRA + EA+E M E
Sbjct: 696 YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 755
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LLAA R H ++ EIAAQR+ +LEP + GN VL+SN++ G++ +V +R
Sbjct: 756 AEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 815
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL-REHG 624
M+ + K+PGCSWIE+ +H F + D+SHPE+K IY +L +T +L RE G
Sbjct: 816 MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKG 868
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 11/473 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L++ A L+ CA +++ G E+HS +++ G + + +L++MY+K + A
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +N+++S + ++ + + L+ F M G P+ YT + C
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 149 AVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
K+IH V K ++Y+ +AL+ Y +C M +A ++ ++ DVV WN+++
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q + +ALE F M G ++T +++A + G +H V+K G+D
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V N LIDMY K F M +KD+ SW +++ + Q H L LF +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ D + ++L A S L +++ ++IH +I+ GL D + N L+D
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL---------DTVIQNELVD 529
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y KC +M A VF + KDV SW MI ++G EA+++F M E L D V
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ +LSA + L++GRE + R G V+DM G L A
Sbjct: 590 LLCILSAAASLSALNKGREIHCYL-LRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 250/497 (50%), Gaps = 15/497 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+LC + + +G+++HS + +T + L+ MY KC + A VF+ + +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP-DR 145
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
F +N MI + SN L + +MR GV +FP L+K C + + ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
L+ KLG +I +ALV+ Y K + A ++F+ + D VLWN++++ Y+ G+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNA 275
+ LE+FR M G + +T+ L+A + K G+ +H V+K + S + V NA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI MY + + +A I M D+ +WNS++ + Q + L F M++AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
V+ ++++ A L+ L+ G ++H Y++ +G N + + N L+DMY+KC
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN--------LQVGNTLIDMYSKCNLT 437
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
F +M KD+ SW +I GY + EAL++F + + +++ DE+ +L A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S + +E + R G++ T+ ++D+ G+ + A + ++ + + V
Sbjct: 498 SVLKSMLIVKE-IHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGK-DVVS 554
Query: 516 WRTLLAASRLHGNTDLA 532
W +++++S L+GN A
Sbjct: 555 WTSMISSSALNGNESEA 571
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 171/335 (51%), Gaps = 11/335 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
F +++ C AV + +++H +FK +LD ++ LV Y KC +++A KVF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P R WN M+ Y GE AL ++ M EG+ + + +L A + ++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHE 312
G +H ++VK+GY S ++NAL+ MY K + A +F+ +EK D WNSI++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G TL LF M G P+ T + L AC + G++IH ++ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL-------KS 313
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
++++ NAL+ MYT+CG M A+ + +M+ DV +WN +I GY + KEAL+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
FS M A K DEV+ +++A L G E
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 349/641 (54%), Gaps = 17/641 (2%)
Query: 1 MLSKISRINPFSSC-FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
+L +SR + ++FS ++ FTL +L+ C + G+ IH ++
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV---ALKACGELREVNYGEMIHGFVK 87
Query: 60 RTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ + S L + +SLI MY KC +M AL +F+ L +P++ T+++M+SGF N ++
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTWSSMVSGFEKNGSPYQA 146
Query: 119 LDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
++FF M V PD+ T L+ C + + +HG V + G D+ + ++L+N
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y K + +EA+ +F+ + +DV+ W+ ++ Y Q G +AL VF M +G + T
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
V VL A + GR H + ++ G ++ V V AL+DMY K EA +F +
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGR 356
KD+ SW ++++ G ++ F ML +PD + VL +CS L L +
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
H Y++ G N F+ +L+++Y++CGS+ +A VF ++ KD W +
Sbjct: 387 CFHSYVIKYGFDSNP--------FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 417 ILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
I GYG+ G+G +AL+ F+ M ++ ++KP+EVTF+ +LSACSH+G + +G LM + Y
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 498
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ P +EHY ++D+LGR G L+ A E+ MP P + TLL A R+H N ++AE
Sbjct: 499 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++F+LE H G Y+LMSN+Y G++E V +R++++Q+ ++K S IE++ +H
Sbjct: 559 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHR 618
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
F++ D HPE + +Y L L ++E + C ++ DS
Sbjct: 619 FVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYEGDS 659
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 182/343 (53%), Gaps = 12/343 (3%)
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+A ++F E+ R + WN ++ ++ ++ + L F M ++ FT+ L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 247 MMGFFKNGRVVHGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ G ++HG V K + S + V ++LI MY K + EAL +F+ +E+ DI +W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 306 SIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
S+++ E+ G+ + F RM +++ PD VT T++ AC+ L+ GR +HG+++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G + +D+ + N+L++ Y K + ++A +F +++KDV SW+ +I Y +G
Sbjct: 192 RGFS--------NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
EAL +F+ M + +P+ T + VL AC+ + L QGR+ L R G+ ++
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA-IRKGLETEVKVS 302
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
T ++DM + EAY + +P + + V W L++ L+G
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNG 344
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K S DA+ +F +M+K+ + WN ++ + Q +E L FS M + KPD T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 451 VLSAC 455
L AC
Sbjct: 66 ALKAC 70
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 333/600 (55%), Gaps = 11/600 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++L C + + G+EIH+ +L++ S L + +LI MY++C +M A +
Sbjct: 249 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 308
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ +V T+N++I G+ N + L+FF+ M G D+ + +I + +L
Sbjct: 309 MN-NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 367
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H V K G D ++ +G+ L++ Y KC + F + +D++ W ++ GYAQ
Sbjct: 368 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 427
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ALE+FR ++K+ + + + +L A ++ + +H +++ G V +
Sbjct: 428 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 486
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+D+YGK + +G A +FE ++ KD+ SW S+++ GN + LF RM+ G
Sbjct: 487 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 546
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V +L A + L+AL GR+IH Y++ G GS + A++DMY C
Sbjct: 547 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS--------IAVAVVDMYACC 598
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ A+ VF ++ +K + + MI YGM G GK A+++F M + PD ++F+ +L
Sbjct: 599 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 658
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACSH+G L +GR FL +ME Y + P EHY C++DMLGRA + EA+E M E
Sbjct: 659 YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 718
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LLAA R H ++ EIAAQR+ +LEP + GN VL+SN++ G++ +V +R
Sbjct: 719 AEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 778
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
M+ + K+PGCSWIE+ +H F + D+SHPE+K IY +L +T +L A T F
Sbjct: 779 MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKF 838
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 11/473 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L++ A L+ CA +++ G E+HS +++ G + + +L++MY+K + A
Sbjct: 142 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 201
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +N+++S + ++ + + L+ F M G P+ YT + C
Sbjct: 202 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 261
Query: 149 AVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
K+IH V K ++Y+ +AL+ Y +C M +A ++ ++ DVV WN+++
Sbjct: 262 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 321
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q + +ALE F M G ++T +++A + G +H V+K G+D
Sbjct: 322 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 381
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V N LIDMY K F M +KD+ SW +++ + Q H L LF +
Sbjct: 382 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 441
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ D + ++L A S L +++ ++IH +I+ GL D + N L+D
Sbjct: 442 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL---------DTVIQNELVD 492
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y KC +M A VF + KDV SW MI ++G EA+++F M E L D V
Sbjct: 493 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 552
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ +LSA + L++GRE + R G V+DM G L A
Sbjct: 553 LLCILSAAASLSALNKGREIHCYL-LRKGFCLEGSIAVAVVDMYACCGDLQSA 604
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 225/446 (50%), Gaps = 14/446 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + + F +N MI + SN L + +MR GV +FP L+K C +
Sbjct: 101 VFDEMP-DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ ++H L+ KLG +I +ALV+ Y K + A ++F+ + D VLWN+++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-Y 266
+ Y+ G+ + LE+FR M G + +T+ L+A + K G+ +H V+K +
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
S + V NALI MY + + +A I M D+ +WNS++ + Q + L F
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M++AG + D V+ ++++ A L+ L+ G ++H Y++ +G N + + N L+
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN--------LQVGNTLI 391
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY+KC F +M KD+ SW +I GY + EAL++F + + +++ DE+
Sbjct: 392 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 451
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
+L A S + +E + R G++ T+ ++D+ G+ + A + +
Sbjct: 452 ILGSILRASSVLKSMLIVKE-IHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFES 509
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLA 532
+ + + V W +++++S L+GN A
Sbjct: 510 IKGK-DVVSWTSMISSSALNGNESEA 534
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 8/279 (2%)
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
KVF+E+P R WN M+ Y GE AL ++ M EG+ + + +L A +
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIM 308
++G +H ++VK+GY S ++NAL+ MY K + A +F+ +EK D WNSI+
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + G TL LF M G P+ T + L AC + G++IH ++
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL----- 274
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
S ++++ NAL+ MYT+CG M A+ + +M+ DV +WN +I GY + KE
Sbjct: 275 --KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 332
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
AL+ FS M A K DEV+ +++A L G E
Sbjct: 333 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 371
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 320/597 (53%), Gaps = 20/597 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + + Q +H ++++TG D+ ++ L+N+Y+KC M+ A VF+N+ N
Sbjct: 74 LQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNM-LRRN 132
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + ++ GF N + F M G P YT ++ C + ++ + H
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K +D D +GSAL + Y KC +E+ALK F + ++V+ W + V+ A G K
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +F M I + FT+T LS + + G V+ + +K GY+S + V N+L+
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLY 312
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ-----------CGNHDGTLRLFDRM 327
+Y K C+ EA +F M++ + +WN+++ H Q C L+LF ++
Sbjct: 313 LYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKL 372
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +PDL T S+VL CS + A+ G QIH + G + DV ++ +L+
Sbjct: 373 NLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGF--------LSDVIVSTSLIS 424
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+KCGS+ A F +MS + + +W MI G+ G ++AL +F M A ++P+ VT
Sbjct: 425 MYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVT 484
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVLSACSH+G +SQ + +M+ +Y + P ++HY C++DM R G+L +A M
Sbjct: 485 FVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKM 544
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E + +W +A + HGN +L AA+++ L+P YVL+ N+Y++ ++E+V
Sbjct: 545 NYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVS 604
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++ V K SWI +KD +++F ++ ++HP++ I L L A+++ G
Sbjct: 605 RVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVG 661
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 21/404 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ C D + E + +HG V K G + ++ S LVN Y KC ME+A +VF+ + R+
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRN 132
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV W ++ G+ Q + A+ VF+ M G + S +T++ VL A + K G H
Sbjct: 133 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHA 192
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
++K D V +AL +Y K + +AL+ F + EK++ SW S ++ G
Sbjct: 193 YIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVK 252
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
LRLF M++ +P+ T ++ L C + +L G Q++ + G N +
Sbjct: 253 GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN--------L 304
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM------DG-----QGKE 428
+ N+L+ +Y K G + +A +F +M + +WN MI G+ D +G E
Sbjct: 305 RVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSE 364
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +FS + + +KPD T VLS CS + QG + + + G + + T +I
Sbjct: 365 ALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQ-IHAQTIKTGFLSDVIVSTSLI 423
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
M + G + A + L M + W +++ HG + A
Sbjct: 424 SMYSKCGSIERASKAFLEMSTR-TMIAWTSMITGFSQHGMSQQA 466
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L +C+ +++G++IH+ ++TG + + TSLI+MYSKC ++ A
Sbjct: 382 FTLSSV---LSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKA 438
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F +S + + +MI+GF + + + L F M GV P+ TF ++ C
Sbjct: 439 FLEMSTR-TMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHA-- 495
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
G+V S +N + + M++ K+ P D + MV+
Sbjct: 496 --------GMV------------SQALNYF---EIMQKKYKI---KPAMD--HYECMVDM 527
Query: 210 YAQIGEFHKALEVFRRMS---KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ ++G +AL ++M+ E IW S F + +GF+ ++
Sbjct: 528 FVRLGRLEQALNFIKKMNYEPSEFIW-SNFIAGCKSHGNLELGFY----AAEQLLSLKPK 582
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI-----FSWNSI 307
D V+ L++MY + + + +MMEE+ + +SW SI
Sbjct: 583 DPETYVL--LLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISI 626
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 360 bits (925), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 203/632 (32%), Positives = 323/632 (51%), Gaps = 81/632 (12%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
+P TSL+ + +++ A F+ + + +NAM+S F A + F+
Sbjct: 91 APSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHA 150
Query: 125 MRQLGVL-PDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ G L PD Y+F LI + +A ++H V K G + + +AL+ Y+K
Sbjct: 151 LLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMK 210
Query: 182 CQFME---EALKVFEELPLRDV-------------------------------VLWNAMV 207
C E +A KV +E+P +D V+WNAM+
Sbjct: 211 CDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMI 270
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY- 266
+GY Q G A E+FRRM E + + FT T VLSA GFF +G+ VHG ++++
Sbjct: 271 SGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 330
Query: 267 ---DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQC------- 314
++ +PV NAL+ +Y KG + A IF+ M KD+ SWN+I++ + C
Sbjct: 331 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEV 390
Query: 315 ----------------------GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
G + L+LF++M + +P T++ + AC L AL
Sbjct: 391 FKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGAL 450
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
HGRQ+H ++V G + S NAL+ MY KCG++ DA++VF M D S
Sbjct: 451 KHGRQLHAHLVQCGFEASNSA--------GNALLTMYAKCGAVNDARLVFLVMPNLDSVS 502
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN MI G G G+EAL++F M + PD ++F+ +L+AC+H+G + +G + M+
Sbjct: 503 WNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMK 562
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+G+ P +HY +ID+LGR+G++ EA +L MP E P +W +L+ R +G+ +
Sbjct: 563 RDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFG 622
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
AA ++F++ P H G Y+L+SN Y A G++ + +R MR + V+K PGCSWIE+
Sbjct: 623 AYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSK 682
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+ D HPEA+ +Y L + AR+R+ G
Sbjct: 683 IHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 714
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 165/398 (41%), Gaps = 67/398 (16%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG---IIDSPLSIT-SLINMYSKCCQMK 84
P T + L CA+ G+ +H ++R + ++ L + +L+ +YSK ++
Sbjct: 295 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 354
Query: 85 YALFVFNNLSCEPNVFTYNAMISGF-----------------YSNDFAF----------- 116
A +F+ ++ + +V ++N ++SG+ Y ND ++
Sbjct: 355 IAKRIFDTMNLK-DVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 413
Query: 117 ---KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L FN MR V P YT+ I C ++ A+ +++H + + G + G+
Sbjct: 414 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 473
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL+ Y KC + +A VF +P D V WNAM++ Q G +ALE+F +M EGI
Sbjct: 474 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 533
Query: 234 SRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
R + +L+A G G + G G LID+ G+ +GEA ++
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 293 FEMME-EKDIFSWNSIMTVHEQCGN-----------------HDGTLRLFDRMLS-AGFQ 333
+ M E W +I++ G+ HDGT L S AG
Sbjct: 594 IKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRW 653
Query: 334 PDLVTFSTVL--------PACSHLAALMHGRQIHGYIV 363
D ++ P CS + G +IH ++V
Sbjct: 654 VDAARVRKLMRDRGVKKEPGCSWIEV---GSKIHVFLV 688
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 333/600 (55%), Gaps = 11/600 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++L C + + G+EIH+ +L++ S L + +LI MY++C +M A +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ +V T+N++I G+ N + L+FF+ M G D+ + +I + +L
Sbjct: 346 MN-NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 404
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H V K G D ++ +G+ L++ Y KC + F + +D++ W ++ GYAQ
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ALE+FR ++K+ + + + +L A ++ + +H +++ G V +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 523
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+D+YGK + +G A +FE ++ KD+ SW S+++ GN + LF RM+ G
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V +L A + L+AL GR+IH Y++ G GS + A++DMY C
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS--------IAVAVVDMYACC 635
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ A+ VF ++ +K + + MI YGM G GK A+++F M + PD ++F+ +L
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACSH+G L +GR FL +ME Y + P EHY C++DMLGRA + EA+E M E
Sbjct: 696 YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 755
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LLAA R H ++ EIAAQR+ +LEP + GN VL+SN++ G++ +V +R
Sbjct: 756 AEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 815
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
M+ + K+PGCSWIE+ +H F + D+SHPE+K IY +L +T +L A T F
Sbjct: 816 MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKF 875
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 11/473 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L++ A L+ CA +++ G E+HS +++ G + + +L++MY+K + A
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +N+++S + ++ + + L+ F M G P+ YT + C
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 149 AVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
K+IH V K ++Y+ +AL+ Y +C M +A ++ ++ DVV WN+++
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q + +ALE F M G ++T +++A + G +H V+K G+D
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V N LIDMY K F M +KD+ SW +++ + Q H L LF +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ D + ++L A S L +++ ++IH +I+ GL D + N L+D
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL---------DTVIQNELVD 529
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y KC +M A VF + KDV SW MI ++G EA+++F M E L D V
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ +LSA + L++GRE + R G V+DM G L A
Sbjct: 590 LLCILSAAASLSALNKGREIHCYL-LRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 250/497 (50%), Gaps = 15/497 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+LC + + +G+++HS + +T + L+ MY KC + A VF+ + +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP-DR 145
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
F +N MI + SN L + +MR GV +FP L+K C + + ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
L+ KLG +I +ALV+ Y K + A ++F+ + D VLWN++++ Y+ G+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNA 275
+ LE+FR M G + +T+ L+A + K G+ +H V+K + S + V NA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI MY + + +A I M D+ +WNS++ + Q + L F M++AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
V+ ++++ A L+ L+ G ++H Y++ +G N + + N L+DMY+KC
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN--------LQVGNTLIDMYSKCNLT 437
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
F +M KD+ SW +I GY + EAL++F + + +++ DE+ +L A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S + +E + R G++ T+ ++D+ G+ + A + ++ + + V
Sbjct: 498 SVLKSMLIVKE-IHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGK-DVVS 554
Query: 516 WRTLLAASRLHGNTDLA 532
W +++++S L+GN A
Sbjct: 555 WTSMISSSALNGNESEA 571
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 171/335 (51%), Gaps = 11/335 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
F +++ C AV + +++H +FK +LD ++ LV Y KC +++A KVF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P R WN M+ Y GE AL ++ M EG+ + + +L A + ++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHE 312
G +H ++VK+GY S ++NAL+ MY K + A +F+ +EK D WNSI++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G TL LF M G P+ T + L AC + G++IH ++ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL-------KS 313
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
++++ NAL+ MYT+CG M A+ + +M+ DV +WN +I GY + KEAL+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
FS M A K DEV+ +++A L G E
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 321/590 (54%), Gaps = 12/590 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ L+ C N G +H + ++ G+++S ++L++MY K ++ +
Sbjct: 116 PFLLSL---GLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + N T+ A+I+G ++ GL +F+ M + V D Y + +K D
Sbjct: 173 VFDEMPTR-NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ + IH K G D + ++ ++L Y KC ++ L F ++ DVV W +V
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y Q+G+ L+ F+RM + + +T + V+S K G +H V+ +G+ +
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+++ +Y K + ++F M+ +DI +W++I+ + Q G + RM
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S G +P+ ++VL C +A L G+Q+H +++ GL + + +AL+ M
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS--------MVCSALIIM 463
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ +A +F K D+ SW MI GY G +EA+++F + + L+PD VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL+ACSH+G + G + M Y + P+ EHY C+ID+L RAG+L++A L +MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + VVW TLL A R+HG+ D + AA V +L+P G ++ ++NI+ A GK++E +
Sbjct: 584 IQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAAN 643
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
IR M+ + V K PG S +++KD + F+S DRSHP+ + IY L L +
Sbjct: 644 IRMLMKSKGVVKEPGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELAS 693
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 239/519 (46%), Gaps = 28/519 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F +G +T ++P L T SL L AH +N E ++ +
Sbjct: 13 FTVLAVAGAKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQL---------------- 56
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPD 133
+ K +K A +F+ L V ++ +ISG+ ++ + + L F+ MR Q + D
Sbjct: 57 KILVKTNHLKDARDLFDQLPQRDEV-SWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ +K C + L +HG K GL V++GSAL++ Y+K + + KVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P R+ V W A++ G + G L F M + + + L A G +
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
GR +H +K G+D V N+L MY K + L F M D+ SW +I+T + Q
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G D L+ F RM ++ P+ TFS V+ C++ A L G Q+H +++ G
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF------ 349
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
++ + + N++M +Y+KCG + VF M +D+ +W+ +I Y G G+EA +
Sbjct: 350 --VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYL 407
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S M KP+E VLS C L QG++ + S G+ T + +I M +
Sbjct: 408 SRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS-VGLEQTSMVCSALIIMYAK 466
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G + EA ++ + + + + W +++ HG++ A
Sbjct: 467 CGSIAEASKIFMDSWKD-DIISWTAMISGYAEHGHSQEA 504
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/589 (34%), Positives = 327/589 (55%), Gaps = 19/589 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C ++++ ++IH+ +L T I P S + + YA F+N+ +P
Sbjct: 39 LQQC---LSIKQLKQIHAQLL-TNSIHKP---NSFLYKIADLKDFAYASVFFSNI-LDPT 90
Query: 99 VFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+++N MI G + + + L+F++ M+ LG+ P+ T+P L C +++AV + H
Sbjct: 91 EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V + GLD D ++ +L+ Y +C M +A KVF+E+ +D+V WN+M++GY+++
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +FR M + G + ++ VL A +G K G V VV+ + +ALI
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MYGK + A IF+ M++KD +WN+++T + Q G + ++LF M + PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +L AC+ + AL G+Q+ Y G DDV++ AL+DMY KCGS+ +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQ--------DDVYVGTALVDMYAKCGSLDN 382
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSAC 455
A VF M KK+ SWN MI GQ +EAL +F M + P+++TFVGVLSAC
Sbjct: 383 AFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
H+G + +GR +M S +G+VP IEHY+C++D+ RAG L EA++ + MP + + V+
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVI 502
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
LL A + N D++E + + +LEP + GNYV+ S +Y ++++ +R M+Q
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQ 562
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWI++ LH F + D H E I+ L L LR G
Sbjct: 563 KGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREG 611
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ ++ L C +L+ G + +++ + + ++LI+MY KC + A +F+++
Sbjct: 230 SLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM 289
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V T+NAMI+G+ N + + + F MR PD+ T ++ C + A+
Sbjct: 290 KKKDKV-TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 348
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++ + G DVY+G+ALV+ Y KC ++ A +VF +P ++ V WNAM++ A
Sbjct: 349 KQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFH 408
Query: 214 GEFHKALEVFRRMSKEGIWMS--RFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ +AL +F+ M EG +S T GVLSA + G G R+ H + G +
Sbjct: 409 GQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 468
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D++ + + EA + M EK
Sbjct: 469 EHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I L CA L G+++ Y G D T+L++MY+KC + A VF +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVL 151
+ N ++NAMIS + A + L F M G V P+ TF ++ C V
Sbjct: 391 P-KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449
Query: 152 EVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E +++ H + GL + S +V+ + + +EEA +P + D V+ A++
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALL 507
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 324/586 (55%), Gaps = 16/586 (2%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+ L+ G+ +H +MLRTG+ D +++++ L+NMY+KC ++ A +F + + ++N
Sbjct: 392 EEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRI-SWN 450
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+IS N + + ++ MRQ + P + + C + + +++H K
Sbjct: 451 TIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW 510
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEV 222
GLDLD + + LV Y +C M + KVF + D V WN M+ A + ++V
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F M + G+ ++ T +L+AL + + G+ VH V+K G V NALI Y K
Sbjct: 571 FNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAK 630
Query: 283 GKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+G +F M + +D SWNS+++ + GN + M+ +G D TFS
Sbjct: 631 SGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSI 690
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L AC+ +AAL G ++H + + + L DV + +AL+DMY+KCG + A +
Sbjct: 691 ILNACASVAALERGMELHAFGIRSHLES--------DVVVESALVDMYSKCGRVDYASKL 742
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F M++++ SWN MI GY G G++A+++F M ++ PD VTFV VLSACSH+G +
Sbjct: 743 FNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLV 802
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G E+ +M +G++P IEHY+CVID+LGRAG++++ E MP E N ++WRT+L
Sbjct: 803 ERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLV 861
Query: 522 ASRLH---GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
A R N DL A++ + ++EP + NYVL SN + A G +E+ R MRQ
Sbjct: 862 ACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATE 921
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K G SW+ L DG+HTFI+ DRSHP K IY +L+ L +R G
Sbjct: 922 KKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAG 967
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 171/324 (52%), Gaps = 7/324 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
I+SL CA L GQ++H ++ G+ +D+ +S L+ MY +C M VFN+++
Sbjct: 485 ISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVS-NVLVKMYGECGAMSDYWKVFNSMA 543
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGL-DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E + ++N M+ S+ + FN+M + G++P+K TF L+ ++VLE+
Sbjct: 544 -EHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSP-LSVLEL 601
Query: 154 -KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYA 211
K++H V K G+ D + +AL++ Y K M +F + RD + WN+M++GY
Sbjct: 602 GKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYI 661
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A++ M G M T + +L+A + + G +H ++ +S V
Sbjct: 662 YNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVV 721
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +AL+DMY K V A ++F M +++ FSWNS+++ + + G + +F+ ML +
Sbjct: 722 VESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSR 781
Query: 332 FQPDLVTFSTVLPACSHLAALMHG 355
PD VTF +VL ACSH + G
Sbjct: 782 ESPDHVTFVSVLSACSHAGLVERG 805
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/557 (22%), Positives = 244/557 (43%), Gaps = 42/557 (7%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+ +H +++ G+ L+N Y+K ++ A VF+ + E N ++ ++SG+
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP-ERNAVSWTCLVSGYVL 139
Query: 112 NDFAFKGLDFFNHMR---QLGVLPDKYTFPCLIKCCCD------VMAVLEVKKIHGLVFK 162
+ A + F M Q G P +TF L++ C D AV ++HGLV K
Sbjct: 140 HGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAV----QVHGLVSK 195
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEAL--KVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
+ + +AL++ Y C L +VF+ P+RD++ WNA+++ YA+ G+
Sbjct: 196 TEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTF 255
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-----VHGIVVKMGYDSGVPVMNA 275
+F+ M + + +LI +G V V+K G S + V +A
Sbjct: 256 TLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSA 315
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF---DRMLSAGF 332
L+ + + EA +IF +++K+ + N ++ + + +++F +
Sbjct: 316 LVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNA 375
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+V S + L GR +HG+++ GL D+ + ++N L++MY KC
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLT------DL-KIAVSNGLVNMYAKC 428
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ A +F M D SWN +I +G +EA+ +S M ++ + P + L
Sbjct: 429 GAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSL 488
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S+C+ L+ G++ + ++G+ ++ M G G +++ +++ +M E +
Sbjct: 489 SSCAGLKLLTAGQQ-VHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA-EHD 546
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA--------GGKYE 564
V W T++ T ++EI + G N V N+ A GK
Sbjct: 547 EVSWNTMMGV-MASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605
Query: 565 EVLDIRHTMRQQNVRKN 581
++H + + NV N
Sbjct: 606 HAAVMKHGVMEDNVVDN 622
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 349/641 (54%), Gaps = 17/641 (2%)
Query: 1 MLSKISRINPFSSC-FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
+L +SR + ++FS ++ FTL +L+ C + G+ IH ++
Sbjct: 12 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV---ALKACGELREVNYGEMIHGFVK 68
Query: 60 RTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ + S L + +SLI MY KC +M AL +F+ L +P++ T+++M+SGF N ++
Sbjct: 69 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTWSSMVSGFEKNGSPYQA 127
Query: 119 LDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
++FF M V PD+ T L+ C + + +HG V + G D+ + ++L+N
Sbjct: 128 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 187
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y K + +EA+ +F+ + +DV+ W+ ++ Y Q G +AL VF M +G + T
Sbjct: 188 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 247
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
V VL A + GR H + ++ G ++ V V AL+DMY K EA +F +
Sbjct: 248 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 307
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGR 356
KD+ SW ++++ G ++ F ML +PD + VL +CS L L +
Sbjct: 308 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 367
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
H Y++ G N F+ +L+++Y++CGS+ +A VF ++ KD W +
Sbjct: 368 CFHSYVIKYGFDSNP--------FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 417 ILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
I GYG+ G+G +AL+ F+ M ++ ++KP+EVTF+ +LSACSH+G + +G LM + Y
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 479
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ P +EHY ++D+LGR G L+ A E+ MP P + TLL A R+H N ++AE
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++F+LE H G Y+LMSN+Y G++E V +R++++Q+ ++K S IE++ +H
Sbjct: 540 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHR 599
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
F++ D HPE + +Y L L ++E + C ++ DS
Sbjct: 600 FVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYEGDS 640
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 174/332 (52%), Gaps = 12/332 (3%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R + WN ++ ++ ++ + L F M ++ FT+ L A + G ++
Sbjct: 4 RSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMI 63
Query: 258 HGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
HG V K + S + V ++LI MY K + EAL +F+ +E+ DI +W+S+++ E+ G+
Sbjct: 64 HGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS 123
Query: 317 HDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ F RM+ A PD VT T++ AC+ L+ GR +HG+++ G +
Sbjct: 124 PYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS------- 176
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+D+ + N+L++ Y K + ++A +F +++KDV SW+ +I Y +G EAL +F+
Sbjct: 177 -NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 235
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + +P+ T + VL AC+ + L QGR+ L R G+ ++ T ++DM +
Sbjct: 236 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA-IRKGLETEVKVSTALVDMYMKCF 294
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
EAY + +P + + V W L++ L+G
Sbjct: 295 SPEEAYAVFSRIPRK-DVVSWVALISGFTLNG 325
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M ++ ++ WN+++ + + L F M +PD T L AC L + +G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 356 RQIHGYIVVNGLAKNGSCKDI---DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
IHG++ KD+ D+++ ++L+ MY KCG M +A +F ++ K D+ +
Sbjct: 61 EMIHGFVK----------KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 110
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
W+ M+ G+ +G +A++ F M A + PD VT + ++SAC+ GR +
Sbjct: 111 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 170
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
R G + +++ ++ EA L M E + + W T++A
Sbjct: 171 -IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL-FKMIAEKDVISWSTVIA 218
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 199/594 (33%), Positives = 326/594 (54%), Gaps = 14/594 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +L+ C+ L+ G+ IH ++ + IDS + + ++LI +YSKC QM A+ VF
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKK--IDSDMFVGSALIELYSKCGQMNDAVKVFTE 164
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVL 151
+P+V + ++I+G+ N L FF+ M L V PD T C +
Sbjct: 165 YP-KPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFN 223
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +HG V + G D + + ++++N Y K + A +F E+P +D++ W++MV YA
Sbjct: 224 LGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYA 283
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G AL +F M + I ++R TV L A + G+ +H + V G++ +
Sbjct: 284 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDIT 343
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMY K A+E+F M +KD+ SW + + + + G +L +F MLS G
Sbjct: 344 VSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNG 403
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD + +L A S L + +H ++ +G N F+ +L+++Y K
Sbjct: 404 TRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNE--------FIGASLIELYAK 455
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVG 450
C S+ +A VF + DV +W+ +I YG GQG+EAL + M + +KP++VTFV
Sbjct: 456 CSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVS 515
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACSH+G + +G + +M + Y ++P IEHY ++D+LGR G+L++A ++ MP +
Sbjct: 516 ILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQ 575
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
A P VW LL A R+H N + E+AA +F L+P H G Y L+SNIY + + +R
Sbjct: 576 AGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLR 635
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ ++K G S +E+K+ +H+FI+SDR H E+ IY L L AR+RE G
Sbjct: 636 TLIKENRLKKIVGQSMVEIKNEVHSFIASDRFHGESDQIYEMLRKLDARMREEG 689
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 238/484 (49%), Gaps = 16/484 (3%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
++HS L+ G+ +T L +Y++ + +A +F C+ V+ +NA++ ++
Sbjct: 22 QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCK-TVYLWNALLRSYFLE 80
Query: 113 DFAFKGLDFFNHMRQLGVL---PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ L F+ M V PD YT +K C + + K IHG + K +D D+
Sbjct: 81 GKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFL-KKKIDSDM 139
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK- 228
++GSAL+ Y KC M +A+KVF E P DVVLW +++ GY Q G AL F RM
Sbjct: 140 FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVL 199
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
E + T+ SA + F GR VHG V + G+D+ + + N+++++YGK +
Sbjct: 200 EQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRI 259
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F M KDI SW+S++ + G L LF+ M+ + + VT + L AC+
Sbjct: 260 AANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACAS 319
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
+ L G+QIH V G D+ ++ ALMDMY KC S +A +F +M KK
Sbjct: 320 SSNLEEGKQIHKLAVNYGFEL--------DITVSTALMDMYLKCFSPENAIELFNRMPKK 371
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DV SW ++ GY G ++L +F M +PD + V +L+A S G + Q L
Sbjct: 372 DVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQAL-CL 430
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
++ G +I++ + ++ A ++ + + V W +++AA HG
Sbjct: 431 HAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGL-RHTDVVTWSSIIAAYGFHGQ 489
Query: 529 TDLA 532
+ A
Sbjct: 490 GEEA 493
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 201/386 (52%), Gaps = 18/386 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ CC + + + ++H K+GL LD ++ + L Y + + A K+FEE P +
Sbjct: 10 LLETCC---SKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKT 66
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR---FTVTGVLSALIMMGFFKNGRV 256
V LWNA++ Y G++ + L +F +M+ + + R +TV+ L + + + G++
Sbjct: 67 VYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKM 126
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+HG +K DS + V +ALI++Y K + +A+++F + D+ W SI+T +EQ G+
Sbjct: 127 IHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGS 185
Query: 317 HDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ L F RM+ PD VT + AC+ L+ GR +HG++ G
Sbjct: 186 PELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTK----- 240
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ + N+++++Y K GS+R A +F +M KD+ SW+ M+ Y +G AL++F+
Sbjct: 241 ---LCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNE 297
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + +++ + VT + L AC+ S L +G++ L YG I T ++DM +
Sbjct: 298 MIDKRIELNRVTVISALRACASSSNLEEGKQIHKL-AVNYGFELDITVSTALMDMYLKCF 356
Query: 496 QLNEAYELALAMPNEANPVVWRTLLA 521
A EL MP + + V W L +
Sbjct: 357 SPENAIELFNRMPKK-DVVSWAVLFS 381
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 325/586 (55%), Gaps = 48/586 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L A NL +++ M R + S ++++ YSK ++ VF+ +S
Sbjct: 65 LHLYAKSGNLSDARDLFDKMSRRDV----FSWNAMLSAYSKSGNVEDLRAVFDQMSVHDA 120
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +YN +I+GF N + + L+FF M++ G YT ++ C ++ + K+IHG
Sbjct: 121 V-SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHG 179
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ L V++ +AL N Y KC +++A +F+ + ++VV WN+M++GY Q G+
Sbjct: 180 RIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPET 239
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
++F M G+ + T++ +LSA G+
Sbjct: 240 CTKLFCEMQSSGLMPDQVTISNILSAYFQCGY---------------------------- 271
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+ EA + F ++EKD W ++M Q G + L LF ML +PD T
Sbjct: 272 -------IDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFT 324
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S+V+ +C+ LA+L G+ +HG V+ G+ D+ +++AL+DMY+KCG DA
Sbjct: 325 ISSVVSSCARLASLCQGQAVHGKAVIFGVDH--------DLLVSSALVDMYSKCGETADA 376
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+VF +M ++V SWN MILGY +G+ EAL ++ M LKPD +TFVGVLSAC H+
Sbjct: 377 WIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHA 436
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + + +G+ PT +HY+C+I++LGRAG +++A +L +M E N ++W T
Sbjct: 437 GLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWST 496
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+ R++ + + E+AA+ +F+L+P + G Y+++SNIY A G++++V +R M+ +
Sbjct: 497 LLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKI 556
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K SWIE+ + +H F++ DR+H E + IY EL+ L +L+E G
Sbjct: 557 KKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESG 602
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 162/334 (48%), Gaps = 43/334 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C+ ++++G++IH ++ T + +S +L NMY+KC + A ++F+ +
Sbjct: 157 THVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRM 216
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV ++N+MISG+ N F M+ G++PD+ T
Sbjct: 217 -VNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTI---------------- 259
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
S +++ Y +C +++EA K F E+ +D V W M+ G AQ
Sbjct: 260 -------------------SNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQN 300
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+ AL +FR M E + FT++ V+S+ + G+ VHG V G D + V
Sbjct: 301 GKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVS 360
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K +A +F+ M +++ SWNS++ + Q G L L++ ML +
Sbjct: 361 SALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLK 420
Query: 334 PDLVTFSTVLPACSHLAALMHGR-------QIHG 360
PD +TF VL AC H + G+ +IHG
Sbjct: 421 PDNITFVGVLSACMHAGLVERGQGYFYSISKIHG 454
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 39/224 (17%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN-------------HD 318
+ N L+ +Y K + +A ++F+ M +D+FSWN++++ + + GN HD
Sbjct: 60 LQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHD 119
Query: 319 G------------------TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
L F RM GF+ T +VL ACS L + G+QIHG
Sbjct: 120 AVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHG 179
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
IV L ++ VF+ NAL +MY KCG++ A+ +F +M K+V SWN MI GY
Sbjct: 180 RIVATSLGES--------VFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGY 231
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+GQ + +F M + L PD+VT +LSA G++ +
Sbjct: 232 LQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEA 275
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY----------------- 420
D F+ N L+ +Y K G++ DA+ +F KMS++DV SWN M+ Y
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116
Query: 421 ------------GMDGQG--KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
G G G +AL+ F M E + + T V VL ACS + +G++
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176
Query: 467 FL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++ + G ++ + + +M + G L++A L M N+ N V W ++++
Sbjct: 177 IHGRIVATSLG--ESVFVWNALTNMYAKCGALDQARWLFDRMVNK-NVVSWNSMISGYLQ 233
Query: 526 HGNTD 530
+G +
Sbjct: 234 NGQPE 238
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 310/555 (55%), Gaps = 10/555 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLG 129
TSL+NMY K + A +F+ + + N F+++ M++G+ + + + D F M +
Sbjct: 157 TSLLNMYCKLGIVSDARRMFDGMP-QRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECP 215
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
++ ++ + +L +++HGL+ K GL V + ++LV Y K M A
Sbjct: 216 SEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAF 275
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VFE R+ + W+AM+ GYAQ GE A+ +F +M G + FT GVL+A +G
Sbjct: 276 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ HG++VK+G++ + V +AL+DMY K C+ +A E F+ + E DI W ++++
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
H Q G H+ L L+ RM G P T ++ L AC+ +AAL G+Q+H IV GL
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGL 455
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+ +AL MY+KCG++ D VF ++ +DV +WN +I G+ +G G A
Sbjct: 456 GAP--------VGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGA 507
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
LD+F M PD +TF+ +L ACSH G + +G E+ LM YG+ P ++HY C++D
Sbjct: 508 LDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVD 567
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+L RAG L EA + ++ + +WR +L A R + D+ A +R+ +L
Sbjct: 568 ILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSA 627
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L+SNIY + K+ +V +RH MR + V K+PGCSW+EL +H F+ ++ HPEA++I
Sbjct: 628 YILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQQHPEAENI 687
Query: 610 YAELHSLTARLREHG 624
A+L L +++ G
Sbjct: 688 NAQLRRLAKHMKDEG 702
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 243/488 (49%), Gaps = 23/488 (4%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ--MKYALFVFNNL-SCEPNVFTYNAM 105
+ G+ +H++ L++G SLIN YS + + A VF+++ +V ++N++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 106 ISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
++ + + LD + R + VLP ++F + H L
Sbjct: 89 LNPLSRH----RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALAC 144
Query: 162 KLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K+ + +VY+ ++L+N Y K + +A ++F+ +P R+ W+ MV GYA +A
Sbjct: 145 KIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAF 204
Query: 221 EVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
++FR M +E S F T VLSA+ + G +HG++VK G V V N+L+ M
Sbjct: 205 DLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K C+G A +FE E++ +W++++T + Q G D + +F +M +AGF P TF
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 324
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
VL A S L AL G+Q HG +V G +++ +AL+DMY KCG + DA+
Sbjct: 325 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQ--------IYVKSALVDMYAKCGCIADAK 376
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
F ++ + D+ W M+ G+ +G+ +EAL +++ M + + P + T L AC+
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G++ L +YG+ + + M + G L + + +P+ + + W ++
Sbjct: 437 ALEPGKQ-LHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSI 494
Query: 520 LAASRLHG 527
++ +G
Sbjct: 495 ISGFSQNG 502
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 20/289 (6%)
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCVGEALEIFEMMEE--KDIFSWNSI 307
++G +H +K G S PV N+LI+ Y + A +F+ + +D+ SWNS+
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + D R F MLS+ STVLP+ AA
Sbjct: 89 LNPLSRHRPLDALSR-FRSMLSS---------STVLPSPHSFAAAFTAAARAASAPAGTA 138
Query: 368 AKNGSCK---DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
A +CK + +V++ +L++MY K G + DA+ +F M +++ SW+ M+ GY +
Sbjct: 139 AHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEK 198
Query: 425 QGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
+EA D+F M E + E VLSA S L G + L+ + G++ +
Sbjct: 199 CSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI-VKDGLLDFVSV 257
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M +AG + A+ + E N + W ++ +G D A
Sbjct: 258 ENSLVTMYAKAGCMGAAFHV-FESSRERNSITWSAMITGYAQNGEADSA 305
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 289/492 (58%), Gaps = 9/492 (1%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
+ Y + L++ C A+ K++H + +LG+ ++ + + LVN Y C + A +F
Sbjct: 57 NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++P ++ LWN ++ YA G A+ ++ +M + G+ FT+ VL A +
Sbjct: 117 DKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIG 176
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
GRV+H V++ G++ V V AL+DMY K CV +A +F+ + ++D WNS++ +
Sbjct: 177 EGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYA 236
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
Q G+ D +L L M + G +P T TV+ + + +A L HGR+IHG+ +G N
Sbjct: 237 QNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDK 296
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
K AL+DMY KCGS++ A ++F ++ +K V SWN +I GY M G EALD+
Sbjct: 297 VK--------TALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDL 348
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F M + + +PD +TFVG L+ACS L +GR LM + PT+EHYTC++D+LG
Sbjct: 349 FERMMK-EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLG 407
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
GQL+EAY+L M + VW LL + + HGN +LAE+A +++ +LEP GNYV+
Sbjct: 408 HCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVI 467
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
++N+Y GK+E V +R M + ++KN CSWIE+K+ ++ F+S D SHP + +IYAE
Sbjct: 468 LANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAE 527
Query: 613 LHSLTARLREHG 624
L L +RE G
Sbjct: 528 LKRLEGLMREAG 539
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 196/380 (51%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L+ G+++H+ + + GI + T L+N YS C ++ A +F+ + + N
Sbjct: 65 LESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP-KGN 123
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+F +N +I + N + ++ M + G+ PD +T P ++K C + + E + IH
Sbjct: 124 LFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHE 183
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + G + DV++G+ALV+ Y KC + +A VF+++ RD VLWN+M+ YAQ G +
Sbjct: 184 RVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDE 243
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L + M+ +G+ + T+ V+S+ + +GR +HG + G+ V ALID
Sbjct: 244 SLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALID 303
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V A +FE + EK + SWN+I+T + G L LF+RM+ QPD +T
Sbjct: 304 MYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHIT 362
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F L ACS L GR ++ +V + C+ V ++D+ CG + +A
Sbjct: 363 FVGALAACSRGRLLDEGRALYNLMVRD-------CRINPTVEHYTCMVDLLGHCGQLDEA 415
Query: 399 QMVFTKMS-KKDVASWNIMI 417
+ +M D W ++
Sbjct: 416 YDLIRQMDVMPDSGVWGALL 435
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 4/180 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T AT + + A L G+EIH + R G + T+LI+MY+KC +K A +F
Sbjct: 259 TEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLF 318
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L E V ++NA+I+G+ + A + LD F M + PD TF + C +
Sbjct: 319 ERLR-EKRVVSWNAIITGYAMHGLAVEALDLFERMMK-EAQPDHITFVGALAACSRGRLL 376
Query: 151 LEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVN 208
E + ++ L+ + ++ V + +V+ C ++EA + ++ + D +W A++N
Sbjct: 377 DEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLN 436
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 328/600 (54%), Gaps = 14/600 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT--GIIDSPLSITSLINMYSKCCQMKYA 86
P + I L+L A NL+ G+ IHS+++ T +S + + SLIN Y+K Q+ A
Sbjct: 26 PSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIA 85
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCC 145
+F+ + E NV +++A+++G+ N F+ K + M G V P++Y I CC
Sbjct: 86 HNLFDRMP-ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCC 144
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
D V E ++ HGL+ K G Y+ +ALV+ Y KC +++A+ V+ E+P+ D+V +N+
Sbjct: 145 DRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNS 204
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++ + G + LEV R M E + + T S + + G VHG ++
Sbjct: 205 ILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSD 264
Query: 266 YDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ V +A+I+MYGK GK + A +F+ ++ +++ W ++M Q G + L LF
Sbjct: 265 VECDAYVSSAIINMYGKCGKSL-MARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLF 323
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+M + + T++ +L AC+ L+A +G +HG+ +G + V + NA
Sbjct: 324 SKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHH--------VMVGNA 375
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L++MY K G + A+ VF+ M +D+ +WN MI G+ G GK+AL +F M A+ P+
Sbjct: 376 LINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPN 435
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VTF GVLSAC H G + +G +L + ++GV P +EHYTC++ +L + GQLNEA
Sbjct: 436 YVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFM 495
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
P + + V WRTLL A +H N L A+ V +++P G Y L+SNIY +++
Sbjct: 496 RTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWD 555
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+ +R MR + ++K PG SWIE+ + H F S D HP+ Y ++ L A ++ G
Sbjct: 556 GVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLG 615
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 326/597 (54%), Gaps = 14/597 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F F TC+ LQ C+ ++ G++IH +++++G ++ TSLI+MYS+
Sbjct: 4 FGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDE 63
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VFN + C+ ++ N MI + + + + F ++ +G+ P+ YTF +I C
Sbjct: 64 AEKVFNGVGCK-DLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTC- 121
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
V E K++HGL K G+ L +G+A++ Y K +EEA ++F + ++++ W A
Sbjct: 122 ---NVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTA 178
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++GY + G KA++ F + G+ + +L G +HG+V+K+G
Sbjct: 179 LISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLG 238
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT-VHEQCGNHDGTLRLF 324
Y + + ALID+Y K K A +F + + S+N+I+ E N + +
Sbjct: 239 YPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFL 298
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
++ AG +PD V+FS +L ++ A+L+ GR +H Y + G A + + ++NA
Sbjct: 299 SQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGH--------ISVSNA 350
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY KCG + DA F MS D SWN +I Y + GQG++AL ++ M E PD
Sbjct: 351 LITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPD 410
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
E+T + +L AC++SG G MES+YG+ P +EHY C++D+LGRAG L++A ++
Sbjct: 411 EITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDII 470
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
P + ++WRTL+ +L G+ +L ++A++ + L P G+YVL+SNIY G +
Sbjct: 471 NRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMID 530
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
E +R TM+ + K G SW+E+ + +H F++S HPE+ IYA L L +R
Sbjct: 531 EASKVRTTMKDLKLSKEAGSSWVEIDNMVHYFVASGTDHPESIEIYARLDLLRNEMR 587
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 214/417 (51%), Gaps = 17/417 (4%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M + G +++T +++ C D+ V+ ++IHG V K G + +V++G++L++ Y +
Sbjct: 1 MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+EA KVF + +D+ N M+ Y + G +A+ VF + G+ + +T T ++S
Sbjct: 61 FDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIIST 120
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ + G+ +HG+ VK G V NA+I MYGK V EA +F +M +K++ SW
Sbjct: 121 CNV----EEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISW 176
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
++++ + + G + + F + G + D +T+L CS L G QIHG ++
Sbjct: 177 TALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIK 236
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY-GMD 423
G C D+ + AL+D+Y KC + + A+ VF +S + AS+N +++G+ D
Sbjct: 237 LGYP----C----DINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIEND 288
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
++ + S + A +KPD V+F +LS ++ L +GR L + G I
Sbjct: 289 SNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRG-LHAYSIKTGFAGHISV 347
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAASRLHGNTDLAEIAAQRV 539
+I M + G + +AY+ +M AN + W +++A LHG + A + Q +
Sbjct: 348 SNALITMYAKCGIVEDAYQAFNSMS--ANDCISWNAIISAYSLHGQGEKALLLYQEM 402
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 292/490 (59%), Gaps = 9/490 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + I C + A+ E +++H + K VY+ + L+ Y++C +++A V +
Sbjct: 42 HDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDG 101
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R+VV W AM++GY+Q G +ALE+F RM + G + FT+ VL++ + +
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
VH +VVK ++S + V ++L+DMYGK + EA ++F+M+ E+D S +I++ + Q
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQL 221
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G D L LF ++ S+G Q + VTF+T+L + S LA+L +G+Q+HG I+ L
Sbjct: 222 GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFF---- 277
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ + N+L+DMY+KCG + ++ VF M ++ SWN M++GYG G G+E + +F
Sbjct: 278 ----IVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFR 333
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M E ++KPD VT + VLS CSH G + +G + L+ V I HY CVID+LGR+
Sbjct: 334 TMTE-EVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRS 392
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
GQL +A +L MP E P +W +LL A R+H N + E+ AQ++ +EPG+ GNYV++S
Sbjct: 393 GQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILS 452
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
NIY A G +++V +R M + V K P SWI L +HTF SS+R HP K I A++
Sbjct: 453 NIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIK 512
Query: 615 SLTARLREHG 624
+ ++ G
Sbjct: 513 EVYVDVKAAG 522
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 179/327 (54%), Gaps = 2/327 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++ C + L +G+++H++M++ T LI +Y +C + A V + + E
Sbjct: 46 AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP-E 104
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++ AMISG+ + + L+ F M + G +++T ++ C ++ +V+++
Sbjct: 105 RNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQV 164
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H LV K + +++GS+L++ Y K ++EA KVF+ LP RD V A+++GYAQ+G
Sbjct: 165 HSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLD 224
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL++FR++ G+ + T T +L++L + G+ VHG++++ + + N+L
Sbjct: 225 DEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSL 284
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMY K + + +F+ M ++ SWN+++ + + G ++LF R ++ +PD
Sbjct: 285 IDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLF-RTMTEEVKPDS 343
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIV 363
VT VL CSH + G I IV
Sbjct: 344 VTLLAVLSGCSHGGLVDEGLDIFDLIV 370
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 141/281 (50%), Gaps = 7/281 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLAT + S C ++Q+ +++HS +++T +SL++MY K ++ A V
Sbjct: 143 FTLATVLTS---CPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKV 199
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L E + + A+ISG+ + LD F + G+ + TF L+ + +
Sbjct: 200 FDMLP-ERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLAS 258
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HGL+ + L + + ++L++ Y KC + + +VF+ +P R + WNAM+ G
Sbjct: 259 LNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMG 318
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDS 268
Y + G + +++FR M++E + T+ VLS G G + ++VK
Sbjct: 319 YGRHGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVI 377
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ +ID+ G+ + +AL++ E M E W S++
Sbjct: 378 HIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLL 418
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/620 (33%), Positives = 343/620 (55%), Gaps = 47/620 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L T+L + +IH+ L G+ I LI+++S + YA FV + + P
Sbjct: 3 LSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQ-TPSPT 57
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
F++N++I + + L + M + P +TFP ++K C + +VLE ++IH
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 159 LVFKLGLDLDVYIGSALVNTYLKC-----------------------------QF--MEE 187
V +LG D+++ ++L++ Y KC Q+ +E+
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 188 ALKVFEELPLR-DVVLWNAMVNGYAQIGEFHKALEVFRRM--SKEGIWMSRFTVTGVLSA 244
A +FEE+P+R +VV W AM+NGY + G+F + L +FR+M S + + + T+ +LSA
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSA 237
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ ++ GR + + ++ ALIDMY K V +A IF+ + K++ SW
Sbjct: 238 CSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSW 297
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+I+T Q G + + L+ M + +P+ +T VL AC+ L AL GR++H Y+
Sbjct: 298 NAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGR 357
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
NGL N V + AL+DMY KCG + DA ++F K S+KDVA WN MILG G
Sbjct: 358 NGLDLN--------VILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHG 409
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
G+++L +FS M A ++P++VTF+GVLSAC+HSG + +GR M ++G+ P +EHY
Sbjct: 410 DGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHY 469
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
C++D+LGRAG L EAYEL M + ++W LL+A R+H N +LA+ ++ + +
Sbjct: 470 ACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQD 529
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ G +L+SNIY + G++++V +R ++++ ++K GCSW+E+ +H F+ D +H
Sbjct: 530 PNIGFCILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHL 589
Query: 605 EAKSIYAELHSLTARLREHG 624
++ IY L L+ G
Sbjct: 590 KSGEIYGAYEILVNHLKAEG 609
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 3/279 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L C+ N + G+ + ++ I + + +T+LI+MYSKC ++ A +F+
Sbjct: 229 ATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDG 288
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+SC+ N+ ++NA+I+G + +D + HM+ V P++ T ++ C + A+
Sbjct: 289 VSCK-NLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALEL 347
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H + + GLDL+V + +ALV+ Y KC +++A +F + +DV LWNAM+ G A
Sbjct: 348 GREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAY 407
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYDSGVP 271
G+ +L VF +M + G+ + T GVLSA G + GRV + K G +
Sbjct: 408 HGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLE 467
Query: 272 VMNALIDMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMT 309
++D+ G+ + EA E+ + M+ D W ++++
Sbjct: 468 HYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLS 506
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 7/197 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L+ G+E+H Y+ R G+ + + T+L++MY+KC ++ A +F
Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKT 390
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S E +V +NAMI G + L F+ M + GV P+ TF ++ C V E
Sbjct: 391 S-EKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEG 449
Query: 154 K-KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYA 211
+ + + K GL + + +V+ + ++EA ++ + + + D ++W A+++
Sbjct: 450 RVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSAC- 508
Query: 212 QIGEFHKALEVFRRMSK 228
H+ LE+ ++S+
Sbjct: 509 ---RIHRNLELADKISE 522
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 330/584 (56%), Gaps = 20/584 (3%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
+KGQE+H+Y++R ++D + I +L+N+Y+KC + A +F + + V ++N++IS
Sbjct: 371 RKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTV-SWNSIIS 429
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G N+ + + F+ MR+ G++P K++ + C + ++ ++IHG K GLDL
Sbjct: 430 GLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDL 489
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEFHKALEVFRRM 226
DV + +AL+ Y + MEE KVF +P D V WN+ + A +A++ F M
Sbjct: 490 DVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEM 549
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G +R T +LSA+ + + GR +H +++K + N L+ YGK + +
Sbjct: 550 MQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQM 609
Query: 287 GEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ IF M E +D SWN++++ + G + L M+ G + D T +TVL A
Sbjct: 610 EDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSA 669
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ +A L G ++H + L +V + +AL+DMY KCG + A F M
Sbjct: 670 CASVATLERGMEVHACAIRACLEA--------EVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+++ SWN MI GY G G +AL +F+ M + PD VTFVGVLSACSH G + +G
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGF 781
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA--- 522
E M Y + P IEH++C++D+LGRAG + + E MP N ++WRT+L A
Sbjct: 782 EHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCR 841
Query: 523 --SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
SR NT+L AA+ + +LEP + NYVL+SN++ AGGK+E+V + R MR V+K
Sbjct: 842 ANSR---NTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKK 898
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
GCSW+ +KDG+H F++ D++HPE + IY +L + ++R+ G
Sbjct: 899 EAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLG 942
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 174/326 (53%), Gaps = 7/326 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKC-CQMKYALFVFN 91
+ I++L CA + GQ+IH ++ G +D +S++ +L+ +Y++ C +Y F
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCG-LDLDVSVSNALLTLYAETDCMEEYQKVFF- 515
Query: 92 NLSCEPNVFTYNAMISGFYSNDFA-FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L E + ++N+ I +++ + + + +F M Q G P++ TF ++ + +
Sbjct: 516 -LMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLL 574
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNG 209
++IH L+ K + D I + L+ Y KC+ ME+ +F + RD V WNAM++G
Sbjct: 575 ELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISG 634
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y G HKA+ + M ++G + FT+ VLSA + + G VH ++ ++
Sbjct: 635 YIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAE 694
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V +AL+DMY K + A FE+M ++I+SWNS+++ + + G+ L+LF +M
Sbjct: 695 VVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQ 754
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
G PD VTF VL ACSH+ + G
Sbjct: 755 HGQLPDHVTFVGVLSACSHVGLVDEG 780
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 214/440 (48%), Gaps = 36/440 (8%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
++ ++H + +TG+ +L+N++ + + A +F+ + + N+ +++ ++S
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMP-QKNLVSWSCLVS 113
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLEVKKIHGLVFKLG 164
G+ N + F + G+LP+ Y ++ C ++ M L + +IHGL+ K
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGM-EIHGLISKSP 172
Query: 165 LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
D+ + + L++ Y C +++A +VFEE+ ++ WN++++ Y + G+ A ++F
Sbjct: 173 YASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLF 232
Query: 224 RRMSKEGIWM----SRFT---VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
M +E + + +T + V +L+ G +++ + K + + V +AL
Sbjct: 233 SSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQML-ARIEKSSFVKDLYVGSAL 291
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ + + + A IFE M++++ + N +M + + ++F M DL
Sbjct: 292 VSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM------KDL 345
Query: 337 V-----TFSTVLPACSHLAALMHGR----QIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
V +++ +L A + + L G+ ++H Y++ N L + + NAL++
Sbjct: 346 VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVW-------ILIGNALVN 398
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y KC ++ +A+ +F M KD SWN +I G + + +EA+ F M + P + +
Sbjct: 399 LYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFS 458
Query: 448 FVGVLSACSHSGFLSQGREF 467
+ LS+C+ G++ G++
Sbjct: 459 VISTLSSCASLGWIMLGQQI 478
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 208/443 (46%), Gaps = 57/443 (12%)
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
D V + ++H ++K GL DV+ + LVN +++ + A K+F+E+P +++V W+
Sbjct: 51 DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG--FFKNGRVVHGIVVK 263
+V+GYAQ G +A +FR + G+ + + + L A +G K G +HG++ K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170
Query: 264 MGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
Y S + + N L+ MY + +A +FE ++ K SWNSI++V+ + G+ +
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230
Query: 323 LFDRMLSAGFQ----PDLVTF-STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
LF M + P+ TF S V ACS + + ++ LA+ +
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGL-------TLLEQMLARIEKSSFVK 283
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+++ +AL+ + + G + A+M+F +M ++ + N +++G QG+EA +F
Sbjct: 284 DLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFK--- 340
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
E+ + ++A S++ LS EF L E + R GQ
Sbjct: 341 -------EMKDLVEINASSYAVLLSAFTEFSNLKEGK------------------RKGQE 375
Query: 498 NEAYELALAMPNEANPVVWRTL-LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
AY + A+ + VW + A L+ + + A+ +FQL P + N
Sbjct: 376 VHAYLIRNALVD-----VWILIGNALVNLYAKCNAID-NARSIFQLMP---SKDTVSWNS 426
Query: 557 YVAG----GKYEEVLDIRHTMRQ 575
++G ++EE + HTMR+
Sbjct: 427 IISGLDHNERFEEAVACFHTMRR 449
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 298/488 (61%), Gaps = 13/488 (2%)
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
P ++K C D+ L+ KKIH LV KLG + DV++ ++LV+ Y + + +A K+F+++P
Sbjct: 1 PPVVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD WNAM++GY Q G +AL++ M EG+ M TV VL +G +G+++
Sbjct: 58 RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H V+K G + + V NALI+MY K +G A ++F ++ KD+ SWN+++T + Q G
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLA 176
Query: 318 DGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ ++ M P+ T+ ++LPA SH+ AL G +IHG ++ N L
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCL--------Y 228
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DVF+ L+DMY KCG + DA +F ++ +K+ WN MI YG+ G G++AL++F M
Sbjct: 229 SDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREM 288
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
++KPD +TFV +LSACSHSG +S + +ME YG+ P+++HY C++D+ GRAG+
Sbjct: 289 KAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGE 348
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L A+ MP + + W LL A R+HGN +L + A++R+F+++ + G YVL+SNI
Sbjct: 349 LEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNI 408
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y GK+E V D+R R + +RKNPG S I L + + F + +++HP+ + IY EL L
Sbjct: 409 YANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDL 468
Query: 617 TARLREHG 624
T++++ G
Sbjct: 469 TSKIKTIG 476
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 166/303 (54%), Gaps = 3/303 (0%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L G++IH +L+ G SL++MYS+ + A +F+++ + ++NAMI
Sbjct: 9 DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPAR-DRGSWNAMI 67
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
SG+ N A + LD + MR GV D T ++ C V +L K IH V K GL+
Sbjct: 68 SGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLE 127
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
++++ +AL+N Y K + A KVF L ++DVV WN ++ GYAQ G +A+EV+ M
Sbjct: 128 FELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLM 186
Query: 227 SK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
+ E I ++ T +L A +G + G +HG V+K S V V LIDMYGK
Sbjct: 187 EEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGK 246
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ +A+ +F + K+ WN++++ + G+ + L LF M + +PD +TF ++L A
Sbjct: 247 LDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSA 306
Query: 346 CSH 348
CSH
Sbjct: 307 CSH 309
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 153/299 (51%), Gaps = 9/299 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L +CA ++ G+ IH Y+++ G+ +LINMY+K + +A VF L
Sbjct: 97 TVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL 156
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLE 152
+V ++N +I+G+ N A + ++ + M + ++P++ T+ ++ V A+ +
Sbjct: 157 I--KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQ 214
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+IHG V K L DV++G+ L++ Y KC +++A+ +F ++P ++ V WNAM++ Y
Sbjct: 215 GMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGV 274
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV-VKMGYDSGVP 271
G+ KALE+FR M E + T +LSA G + + ++ + G +
Sbjct: 275 HGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLK 334
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHD----GTLRLFD 325
++D++G+ + A + M + D +W +++ GN + + RLF+
Sbjct: 335 HYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE 393
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/556 (34%), Positives = 306/556 (55%), Gaps = 20/556 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK---YALFVFNNLSCEPNVFTYNAMISG 108
Q++H+ M+ I +P + ++ SK +K Y+ +F++++ PN + +N MI
Sbjct: 41 QQVHTQMVVNSSIHTPNN-----HLLSKAIHLKNFPYSSLLFSHIAPHPNDYAFNIMIRA 95
Query: 109 FYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + L F+ M L + PD +TFP C ++ ++ H L+FKL L
Sbjct: 96 LTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHS 155
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D + +L+ Y +C + A KVF+E+P RD V WN+M+ GYA+ G +A+EVFR M
Sbjct: 156 DPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMG 215
Query: 228 K-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ +G ++ +L A +G + GR V G VV+ G + +ALI MY K +
Sbjct: 216 RRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGEL 275
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A IF+ M +D+ +WN++++ + Q G D + LF M + +T + VL AC
Sbjct: 276 ESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSAC 335
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ + AL G+QI Y G D+F+ AL+DMY K GS+ +AQ VF M
Sbjct: 336 ATIGALDLGKQIDEYASQRGFQH--------DIFVATALIDMYAKSGSLDNAQRVFKDMP 387
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSACSHSGFLSQG 464
+K+ ASWN MI G+ KEAL +F M + +P+++TFVG+LSAC H+G + +G
Sbjct: 388 QKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEG 447
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+M + +G+VP IEHY+C++D+L RAG L EA++L MP + + V LL A R
Sbjct: 448 YRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACR 507
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
N D+ E + + +++P + GNY++ S IY +E+ +R MRQ+ + K PGC
Sbjct: 508 SKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGC 567
Query: 585 SWIELKDGLHTFISSD 600
SWIE+++ LH F + D
Sbjct: 568 SWIEVENHLHEFHAGD 583
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 142/269 (52%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ ++ L C +L+ G+ + +++ G+ + ++LI+MY+KC +++ A +F+ +
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V T+NA+ISG+ N A + + F+ M++ V +K T ++ C + A+
Sbjct: 286 AAR-DVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLG 344
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+I + G D+++ +AL++ Y K ++ A +VF+++P ++ WNAM++ A
Sbjct: 345 KQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAH 404
Query: 214 GEFHKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ +AL +F+ MS E G + T G+LSA + G G R+ + G +
Sbjct: 405 GKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 464
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ + + EA ++ M EK
Sbjct: 465 EHYSCMVDLLARAGHLYEAWDLIRKMPEK 493
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 193/597 (32%), Positives = 318/597 (53%), Gaps = 23/597 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ L C+ + L G+ IH + G+ + ++L++MY +C ++ A +F +L
Sbjct: 132 VSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLER 191
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLEV 153
+V +NAMI+ N + L+ F M QLG+ PD TF + K C + +V
Sbjct: 192 HLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQV 251
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K H + + GL DV + +ALVN Y +C ++ A K F E+P R+ V W +M+ + QI
Sbjct: 252 KGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQI 311
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G A+E F M EG+ +R T+ +AL + R+V I ++G + V ++
Sbjct: 312 GHL-LAVETFHAMLLEGVVPTRSTL---FAALEGCEDLRVARLVEAIAQEIGVVTDVAIV 367
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS-----IMTVHEQCGNHDGTLRLFDRML 328
L+ Y + +A+ +F EE + W++ ++ V+ QC + T +L+ +
Sbjct: 368 TDLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYAQCRDRRSTFKLWGAAI 424
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMD 387
G PD + + T L AC+ LAAL GRQIH + + + +D DV + NA++
Sbjct: 425 ERGISPDRILYITALDACASLAALSEGRQIHACVAAD--------RRLDRDVTLGNAIVS 476
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY +CGS+RDA+ F M +D SWN M+ G+ ++ D+F M + + +
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIA 536
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ +LSAC+H+G + G E M +GVVP EHY C++D+LGR G+L +A+ + AM
Sbjct: 537 FLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + W L+ A R++G+T+ AA+RV +L H YV + NIY A G++++
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAA 656
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M +RK PG S IE++ +H F+ DRSHP++++IYAEL + + G
Sbjct: 657 AVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAG 713
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 199/465 (42%), Gaps = 19/465 (4%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+SL+ MY +C ++ A+ VF+ ++ ++ + +IS + S + + F+ + Q G+
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIA-HKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGI 124
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D F ++ C + + IH + GL L + SALV+ Y +C + +A
Sbjct: 125 ALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANA 184
Query: 191 VFEELPLR-DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F L DVVLWNAM+ +Q G +ALE+F RM + GI T V A
Sbjct: 185 LFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSP 244
Query: 250 FFKNGRV--VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ +V H + + G S V V AL++ Y + + A + F M E++ SW S+
Sbjct: 245 SLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSM 304
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ Q G H + F ML G P T L C L I I V
Sbjct: 305 IAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGV--- 360
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQ 425
+ DV + L+ Y +C DA VF+ + D A MI Y
Sbjct: 361 --------VTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRD 412
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+ ++ E + PD + ++ L AC+ LS+GR+ + + + +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
++ M G+ G L +A + MP + + W +L+AS HG +
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 8/289 (2%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D Y+ S+LV YL+C +E A+ VF ++ + +VLW +++ Y G A+ +F R+
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EGI + VLSA F GR++H V+ G V +AL+ MYG+ +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 288 EALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A +F +E D+ WN+++T + Q G+ L +F RML G PDLVTF +V AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S +L Q+ G+ GS DV + AL++ Y +CG + A+ F +M
Sbjct: 241 SSSPSL-RASQVKGFHACLDETGLGS-----DVVVATALVNAYARCGEIDCARKFFAEMP 294
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+++ SW MI + G A++ F M + P T L C
Sbjct: 295 ERNAVSWTSMIAAFTQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D ++ ++L+ MY +CGS+ A VF K++ K + W ++I Y G A+ +F +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ + D + FV VLSACS FL+ GR +E+ G+ + + ++ M GR G
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVA--SALVSMYGRCGS 178
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
L +A L + + V+W ++ A+ +G+ A R+ QL
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQL 224
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 326/608 (53%), Gaps = 41/608 (6%)
Query: 46 TNLQKGQEIHSYMLRTGIIDS-PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA 104
T+L +++H+ +LR+ + S L + +I+ + + YAL VFN L +P N
Sbjct: 34 TSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN-LIPKPETHLCNR 92
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+ ++ K L + MR G+ D+++FP L+K V +++E +IHGL KLG
Sbjct: 93 FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
D D ++ + LV Y C + EA +F+++ RDVV W+ M++GY Q G F+ AL +F
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M + ++ VLSA G G+++H +++ + +AL+ MY
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272
Query: 285 CVGEALEIFEMME-------------------------------EKDIFSWNSIMTVHEQ 313
+ AL +FE M +KD+ W+++++ + +
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
+ L LF+ M S G +PD VT +V+ AC+HL AL + IH ++ NG
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFG----- 387
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ +NNAL++MY KCGS+ A+ +F KM +K+V SW MI + M G AL F
Sbjct: 388 ---GALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFF 444
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + ++P+ +TFVGVL ACSH+G + +GR+ M + + + P HY C++D+ GR
Sbjct: 445 HQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGR 504
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
A L EA EL AMP N ++W +L+AA R+HG +L E AA+R+ +L+P H G +V +
Sbjct: 505 ANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFL 564
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
SNIY ++E+V +R M+ + + K GCS EL + +H F+ +DRSH A IY +L
Sbjct: 565 SNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKL 624
Query: 614 HSLTARLR 621
+ + ++L+
Sbjct: 625 YEVVSKLK 632
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 194/564 (34%), Positives = 321/564 (56%), Gaps = 12/564 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA ++KG+E+H +++ G +L++ Y C ++ A VF+ + E +
Sbjct: 48 LKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMP-EKD 106
Query: 99 VFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++N MI F N + ++ LD F M G+ P+ T + ++ +++H
Sbjct: 107 LVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVH 166
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G ++GL+ D++I ++L++ Y K EA VF +L ++VV WNAM+ +AQ
Sbjct: 167 GSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFEL 226
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+ + R+M G + T T VL A MG + G+ +H + MG + V NAL
Sbjct: 227 VAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALT 286
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A +F+ +D S+N ++ H Q + +L LF M G + D V
Sbjct: 287 DMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNV 345
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+F L AC++L A+ G++IHG+++ + +F+ N+L+D YTKCG +
Sbjct: 346 SFMGALSACANLTAIKQGKEIHGFLLRKLFHIH--------LFVANSLLDFYTKCGRIGL 397
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ +F +M+ KDVASWN MILGYGM G+ A+D+F M + ++ D V+F+ VLSACSH
Sbjct: 398 ARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSH 457
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G L +GR++ +++R G+ PT HY C++D+LGRAG + EA EL +P + +W
Sbjct: 458 GGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWG 516
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A R++GN +LA AA+ +F+L+P H G Y L+SN+Y G+++E IR M+ +
Sbjct: 517 ALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRG 576
Query: 578 VRKNPGCSWIELKDGLHTFISSDR 601
V+K+PGCSW+++ + H F+ ++
Sbjct: 577 VKKSPGCSWVQIGEQAHAFVVGEK 600
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/435 (33%), Positives = 243/435 (55%), Gaps = 15/435 (3%)
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
F +N +I G YS GL+ +N M ++GV PD +TFP ++K C D V + +++HG
Sbjct: 8 FLWNTLIRG-YSIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGS 66
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG-EFHK 218
V KLG + DV++G+ L++ Y C + +A +VF+E+P +D+V WN M+ ++ G +
Sbjct: 67 VVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRD 126
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++FR M EG+ + T++ L L+ + FFK GR VHG ++MG +S + + N+LID
Sbjct: 127 ALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLID 186
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K EA +F ++ K++ SWN+++ Q + L +M G P+ VT
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F+ VLPAC+ + + G++IH + G A D+F++NAL DMY K G ++ A
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAF--------DLFVSNALTDMYAKSGHLKLA 298
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF S +D S+NI+I+G+ E+L +FS M LK D V+F+G LSAC++
Sbjct: 299 RNVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANL 357
Query: 459 GFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+ QG+E L+ + + + + ++D + G++ A + M N+ + W
Sbjct: 358 TAIKQGKEIHGFLLRKLFHIHLFVAN--SLLDFYTKCGRIGLARNIFDRMTNK-DVASWN 414
Query: 518 TLLAASRLHGNTDLA 532
T++ + G D A
Sbjct: 415 TMILGYGMLGELDTA 429
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ +L CA+ T +++G+EIH ++LR SL++ Y+KC ++ A +F+ ++
Sbjct: 348 MGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMT- 406
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V ++N MI G+ +D F +MR+ V D +F ++ C + + +K
Sbjct: 407 NKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRK 466
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMV 207
+ G++ + +V+ + MEEA ++ + LP+ D +W A++
Sbjct: 467 YFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALL 519
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 333/588 (56%), Gaps = 15/588 (2%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
A Q L+KG+E+H +++ TG++D + I L+NMY+KC + A VF + E + +
Sbjct: 44 AEQVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFM-MEKDSVS 102
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N+MI+G N + ++ + MR+ +LP +T + C + ++IHG
Sbjct: 103 WNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESL 162
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE-FHKAL 220
KLG+DL+V + +AL+ Y + ++ E K+F +P D V WN+++ A +A+
Sbjct: 163 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAV 222
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
F + G ++R T + VLSA+ + F + G+ +HG+ +K NALI Y
Sbjct: 223 ACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACY 282
Query: 281 GKGKCVGEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
GK + +IF M E +D +WNS+++ + L L ML G + D +
Sbjct: 283 GKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 342
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+TVL A + +A L G ++H V L DV + +AL+DMY+KCG + A
Sbjct: 343 ATVLSAFASVATLERGMEVHACSVRACLE--------SDVVVGSALVDMYSKCGRLDYAL 394
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHS 458
F M ++ SWN MI GY GQG+EAL +F+ M + + PD VTFVGVLSACSH+
Sbjct: 395 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHA 454
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G + M YG+ P IEH++C+ D+LGRAG+L++ + MP + N ++WRT
Sbjct: 455 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRT 514
Query: 519 LLAAS-RLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+L A R +G +L + AA+ +FQLEP + NYVL+ N+Y AGG++E+++ R M+
Sbjct: 515 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 574
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V+K G SW+ +KDG+H F++ D+SHP+ IY +L L ++R+ G
Sbjct: 575 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAG 622
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 8/327 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I+SL CA + GQ+IH L+ G ID +S++ +L+ +Y++ + +F++
Sbjct: 137 TLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSS 195
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLD--FFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ E + ++N++I S++ + F N +R G ++ TF ++ +
Sbjct: 196 MP-EHDQVSWNSIIGALASSERSLPEAVACFLNALRA-GQKLNRITFSSVLSAVSSLSFG 253
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNG 209
K+IHGL K + + +AL+ Y KC M+ K+F + RD V WN+M++G
Sbjct: 254 ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 313
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y KAL++ M + G + F VLSA + + G VH V+ +S
Sbjct: 314 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 373
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-L 328
V V +AL+DMY K + AL F M ++ +SWNS+++ + + G + L+LF M L
Sbjct: 374 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKL 433
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
PD VTF VL ACSH L G
Sbjct: 434 DGQTPPDHVTFVGVLSACSHAGLLEEG 460
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F AT +++ A L++G E+H+ +R + + ++L++MYSKC ++ YAL
Sbjct: 340 FMYATVLSAF---ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 396
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVM 148
FN + N +++N+MISG+ + + L F +M+ G PD TF ++ C
Sbjct: 397 FNTMPVR-NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAG 455
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
+ E K + GL + S + + + +++ +++P++ +V++W +
Sbjct: 456 LLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTV 515
Query: 207 V------NGY-AQIGEFHKALEVFRRMSKE 229
+ NG A++G+ KA E+ ++ E
Sbjct: 516 LGACCRANGRKAELGK--KAAEMLFQLEPE 543
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 330/600 (55%), Gaps = 18/600 (3%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
SSG + FT + L CA +L+ G + HS +++ + + +L++MY+K
Sbjct: 421 SSGYNIDDFTFT-----SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C ++ A +F + C+ + T+N +I + ++ + D F M G++ D
Sbjct: 476 CGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+K C V + + K++H L K GLD D++ GS+L++ Y KC +++A KVF LP
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV NA++ GY+Q +A+ +F+ M G+ S T ++ A G HG
Sbjct: 595 VVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 260 IVVKMGYDS-GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNH 317
+ K G+ S G + +L+ MY + + EA +F E+ K I W +M+ H Q G +
Sbjct: 654 QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L+ + M G PD TF TVL CS L++L GR IH I LA D+D
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF--HLAH-----DLD 766
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGMDGQGKEALDMFSCM 436
++ +N L+DMY KCG M+ + VF +M ++ +V SWN +I GY +G ++AL +F M
Sbjct: 767 EL-TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
++ + PDE+TF+GVL+ACSH+G +S GR+ +M +YG+ ++H C++D+LGR G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L EA + A + + +W +LL A R+HG+ EI+A+++ +LEP + YVL+SNI
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNI 945
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y + G +E+ +R MR + V+K PG SWI+++ H F + D+SH E I L L
Sbjct: 946 YASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 238/462 (51%), Gaps = 14/462 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
L+ ++IN Y + ++K A +F +S P+V +N MISG +++F +MR+
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEMS-SPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVK-KIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
V + T ++ ++A L++ +H KLGL ++Y+GS+LV+ Y KC+ ME
Sbjct: 321 SSVKSTRSTLGSVLSAI-GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A KVFE L ++ V WNAM+ GYA GE HK +E+F M G + FT T +LS
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ G H I++K + V NAL+DMY K + +A +IFE M ++D +WN+
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
I+ + Q N LF RM G D ++ L AC+H+ L G+Q+H V G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L + D+ ++L+DMY+KCG ++DA+ VF+ + + V S N +I GY +
Sbjct: 560 LDR--------DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY-T 485
+EA+ +F M + P E+TF ++ AC L+ G +F + R G E+
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGI 669
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ M + + EA L + + + V+W +++ +G
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 257/509 (50%), Gaps = 21/509 (4%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
FN SS T + TL + ++++ + A NL G +H+ ++ G+ + +SL+
Sbjct: 316 FNMRKSSVKSTRS---TLGSVLSAIGIVA---NLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
+MYSKC +M+ A VF L + +VF +NAMI G+ N + K ++ F M+ G D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+TF L+ C + + H ++ K L ++++G+ALV+ Y KC +E+A ++FE
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ RD V WN ++ Y Q +A ++F+RM+ GI + L A + G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH + VK G D + ++LIDMY K + +A ++F + E + S N+++ + Q
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ- 607
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
N + + LF ML+ G P +TF+T++ AC +L G Q HG I G + G
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE-- 665
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMF 433
++ +L+ MY M +A +F+++S K + W M+ G+ +G +EAL +
Sbjct: 666 -----YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 720
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--CVIDML 491
M + PD+ TFV VL CS L +GR L+ + + ++ T +IDM
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMY 777
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + + ++ M +N V W +L+
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 254/523 (48%), Gaps = 50/523 (9%)
Query: 1 MLSKISRI-NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
MLS S I P +F + NQ F + FT + +++ CA +TN++ G++IH M+
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST---CARETNVEFGRQIHCSMI 187
Query: 60 RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
+ G+ + +L++MY+KC ++ A VF + +PN + + SG+ + +
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F MR G PD F +I NTY
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVI-----------------------------------NTY 271
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
++ +++A +F E+ DVV WN M++G+ + G A+E F M K + +R T+
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
VLSA+ ++ G VVH +K+G S + V ++L+ MY K + + A ++FE +EEK
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
+ WN+++ + G + LF M S+G+ D TF+++L C+ L G Q H
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
I+ LAKN +F+ NAL+DMY KCG++ DA+ +F +M +D +WN +I
Sbjct: 452 SIIIKKKLAKN--------LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
Y D EA D+F M + D L AC+H L QG++ + + + G+
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDR 562
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ + +IDM + G + +A ++ ++P E + V L+A
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG 604
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 219/475 (46%), Gaps = 47/475 (9%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ G+ +HS L GI +++++Y+KC Q+ YA F+ L E +V +N+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLS 133
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ S K L F + + + P+K+TF ++ C V ++IH + K+GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ Y G ALV+ Y KC + +A +VFE + + V W + +GY + G +A+ VF RM
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
EG V++ I +G K+ R+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARL------------------------------- 282
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+F M D+ +WN +++ H + G + F M + + T +VL A
Sbjct: 283 ----LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+A L G +H + GLA N +++ ++L+ MY+KC M A VF + +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASN--------IYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+ WN MI GY +G+ + +++F M + D+ TF +LS C+ S L G +F
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++ + + + ++DM + G L +A ++ M + N V W T++ +
Sbjct: 451 HSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGS 503
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 137/309 (44%), Gaps = 25/309 (8%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VH + +G DS + NA++D+Y K V A + F+ +E KD+ +WNS+++++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LR F + P+ TFS VL C+ + GRQIH ++ GL +N C
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
AL+DMY KC + DA+ VF + + W + GY G +EA+ +F
Sbjct: 198 --------GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + +PD + FV V++ G L R M S P + + +I G+
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGK 304
Query: 494 AGQLNEAYELALAMPNEANPVVWRTL---LAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
G A E M + TL L+A + N DL + +L
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG------- 357
Query: 551 VLMSNIYVA 559
L SNIYV
Sbjct: 358 -LASNIYVG 365
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/608 (32%), Positives = 337/608 (55%), Gaps = 18/608 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF L +C + +N+ G+ IH Y+++ G + T+L MY +C + + A
Sbjct: 13 YPFVLRSC-------SSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAH 65
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ S + + + G ND F M ++PD +TF L++ +
Sbjct: 66 QLFDKRSVKDLGWPSSLTTEG-PQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGL 124
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
++ K +H + L D+ + +A+++ Y K + + +A K+F+++P +D V+WN M+
Sbjct: 125 NSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMI 184
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
YA+ G+ + LE+F+ M++ GI FT V+S++ + G+ H +++ G D
Sbjct: 185 AAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSD 244
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V V N+LIDMY + K + A +IF M +K + SW++++ + + G L LF +M
Sbjct: 245 SQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKM 304
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
S G Q D V +LPA H+ AL + + +HGY + GL S +N AL+
Sbjct: 305 KSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPS--------LNTALLI 356
Query: 388 MYTKCGSMRDAQMVFT--KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
Y KCGS+ AQ +F K+ KD+ WN MI + G + +++ M + KPD+
Sbjct: 357 TYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQ 416
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+G+L+AC +SG + +G+EF M YG P+ EHY C++++LGRAG ++EA EL
Sbjct: 417 VTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVK 476
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP + + VW LL+A ++H + LAE AA+++ +EP + GNY+L+SNIY A GK++
Sbjct: 477 NMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDG 536
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
V +R +R + ++K PGCSW+E+ + F +D++HP A IY L +L ++E +
Sbjct: 537 VAKMRSFLRNKGLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVRE 596
Query: 626 CCAGTLFD 633
TL +
Sbjct: 597 KSPDTLVN 604
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 190/398 (47%), Gaps = 10/398 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD+ T+P +++ C V + IHG + KLG DL + +AL Y +C E A ++
Sbjct: 8 PDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQL 67
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F++ ++D+ +++ Q VF RM E + FT +L + +
Sbjct: 68 FDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSI 127
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ ++VH I + + V A++ +Y K + + +A ++F+ M EKD WN ++ +
Sbjct: 128 QLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAY 187
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G L LF M +G + DL T V+ + + L + G+Q H +I+ NG
Sbjct: 188 AREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG----- 242
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
V ++N+L+DMY +C + A +F M+ K V SW+ MI GY +GQ AL
Sbjct: 243 ---SDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALS 299
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+FS M ++ D V + +L A H G L + ++L + G+ T ++
Sbjct: 300 LFSKMKSDGIQADFVIMINILPAFVHIGAL-ENVKYLHGYSMKLGLTSLPSLNTALLITY 358
Query: 492 GRAGQLNEAYEL-ALAMPNEANPVVWRTLLAASRLHGN 528
+ G + A L ++ + ++W ++++A HG+
Sbjct: 359 AKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGD 396
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M++ PD T+ VL +CS + + GR IHGY+V G D+ DV + AL
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGF-------DLFDV-VATALA 52
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
+MY +C +A +F K S KD+ + + + G+ +F M +L PD
Sbjct: 53 EMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSF 112
Query: 447 TFVGVLS--ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
TF +L A +S L++ + ++ G + T V+ + + L +A +L
Sbjct: 113 TFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLV---NTAVLSLYSKLRSLVDARKLF 169
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
MP E + VVW ++AA G
Sbjct: 170 DKMP-EKDRVVWNIMIAAYAREG 191
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 330/615 (53%), Gaps = 13/615 (2%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
N F S F S + F F TC LQ C+ + G++IH +++++G ++
Sbjct: 147 NDFQSAF--SIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
TSLI MY+K A VF+++ + ++ N MI + K ++ F ++
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFK-DIRCLNFMILEYGRAGNGGKAIEVFKNLLND 263
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G P YTF +I C + V E K++ GL FK G + +G+A++ Y +EA
Sbjct: 264 GFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEA 323
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIM 247
++F + ++++ W A+++GY++ G KA++ F + E GI +T +L
Sbjct: 324 ERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSD 383
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ G +HG V+K+G V V AL+D+Y K + + A +F+ + K I S+N+I
Sbjct: 384 CNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAI 443
Query: 308 MT-VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+ E G+ + + LF+++ AG +PD+VTFS +L ++ A+L GR H Y V G
Sbjct: 444 LAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTG 503
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
N + + N+++ MY KCGS+ DA +F M+ +D SWN +I Y + GQ
Sbjct: 504 FDTN--------ISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQA 555
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+++L +F M PDE T + +L AC++SG G LME +YG+ P +EHY C
Sbjct: 556 QKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYAC 615
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
+ D+LGRAG L+EA ++ P + ++WRTL+ +LHGN + ++A++ + L P
Sbjct: 616 MADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLSPVE 675
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
G+Y+L+SN+Y + +E +R M RK G SWIE+ + +H F++SD+ HPE+
Sbjct: 676 AGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFVASDKDHPES 735
Query: 607 KSIYAELHSLTARLR 621
+ IY L LT ++
Sbjct: 736 REIYTRLELLTDEMK 750
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 243/483 (50%), Gaps = 21/483 (4%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ +HSY+++ G D +++N+Y K ++ A VF+ + N T+ ++I G+
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTR-NTITWTSLIKGYL 144
Query: 111 -SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
NDF M + G +++T +++ C + ++IH V K G D +V
Sbjct: 145 EDNDFQ-SAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENV 203
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++G++L+ Y K F + A KVF+ + +D+ N M+ Y + G KA+EVF+ + +
Sbjct: 204 FVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLND 263
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G + +T T ++S + G+ + G+ K G+ S V NA+I MYG EA
Sbjct: 264 GFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEA 323
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNH----DGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+F M EK++ SW ++++ + + G D L L D + G D + +L
Sbjct: 324 ERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDEL---GINFDSTLLTAILDC 380
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L G QIHG+++ G A C DV + AL+D+Y KC ++ A++VF +
Sbjct: 381 CSDCNNLELGLQIHGFVMKLGCA----C----DVNVATALVDLYAKCEKLQSARIVFDHL 432
Query: 406 SKKDVASWNIMILGY-GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
S K +AS+N ++ G+ G ++ + +F+ + A +KPD VTF +LS ++ L +G
Sbjct: 433 SNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKG 492
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
R F + G I VI M + G + +A+++ M N + + W L++A
Sbjct: 493 RSFHAYT-VKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIM-NCRDSISWNALISAYA 550
Query: 525 LHG 527
LHG
Sbjct: 551 LHG 553
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 171/365 (46%), Gaps = 10/365 (2%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+P LIK L + +H + K G D + G+ ++N Y+K ++ A KVF+ +
Sbjct: 70 WPELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMR 129
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
R+ + W +++ GY + +F A + M K G + T T +L A G
Sbjct: 130 TRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQ 189
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+H V+K G+D V V +LI MY K A ++F+ M KDI N ++ + + GN
Sbjct: 190 IHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGN 249
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ +F +L+ GF+P TF+ ++ C+ + G+Q+ G G +
Sbjct: 250 GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGF--------L 301
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ + NA++ MY G ++A+ +F+ MS+K++ SW +I GY G GK+A+D F +
Sbjct: 302 SETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGL 361
Query: 437 -CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
E + D +L CS L G + + + G + T ++D+ +
Sbjct: 362 HDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFV-MKLGCACDVNVATALVDLYAKCE 420
Query: 496 QLNEA 500
+L A
Sbjct: 421 KLQSA 425
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/597 (33%), Positives = 334/597 (55%), Gaps = 11/597 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +N+ G+ IH Y+++ G + T+L MY +C + + A +F+ S +
Sbjct: 132 LRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDL 191
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ + G ND F M ++PD +TF L++ + ++ K +H
Sbjct: 192 GWPSSLTTEG-PQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHC 250
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ L D+ + +A+++ Y K + + +A K+F+++P +D V+WN M+ YA+ G+ +
Sbjct: 251 IAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTE 310
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
LE+F+ M++ GI FT V+S++ + G+ H +++ G DS V V N+LID
Sbjct: 311 CLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLID 370
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY + K + A +IF M +K + SW++++ + + G L LF +M S G Q D V
Sbjct: 371 MYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVI 430
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+LPA H+ AL + + +HGY + GL S +N AL+ Y KCGS+ A
Sbjct: 431 MINILPAFVHIGALENVKYLHGYSMKLGLTSLPS--------LNTALLITYAKCGSIEMA 482
Query: 399 QMVFT--KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
Q +F K+ KD+ WN MI + G + +++ M + KPD+VTF+G+L+AC
Sbjct: 483 QRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACV 542
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+SG + +G+EF M YG P+ EHY C++++LGRAG ++EA EL MP + + VW
Sbjct: 543 NSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVW 602
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL+A ++H + LAE AA+++ +EP + GNY+L+SNIY A GK++ V +R +R +
Sbjct: 603 GPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNK 662
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFD 633
++K PGCSW+E+ + F +D++HP A IY L +L ++E + TL +
Sbjct: 663 GLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVN 719
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 240/505 (47%), Gaps = 12/505 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
N P T + + +L L + N +Q Q+IH+ + G +P + LI+ Y+ +
Sbjct: 17 LNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLN 76
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
++L VF ++ +PN+ +NA++ + + L + M + PD+ T+P +++ C
Sbjct: 77 HSLQVFCSV-IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSC 135
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
V + IHG + KLG DL + +AL Y +C E A ++F++ ++D+ +
Sbjct: 136 SSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPS 195
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ Q VF RM E + FT +L + + + ++VH I +
Sbjct: 196 SLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVS 255
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ V A++ +Y K + + +A ++F+ M EKD WN ++ + + G L LF
Sbjct: 256 KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF 315
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +G + DL T V+ + + L + G+Q H +I+ NG V ++N+
Sbjct: 316 KSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG--------SDSQVSVHNS 367
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY +C + A +F M+ K V SW+ MI GY +GQ AL +FS M ++ D
Sbjct: 368 LIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQAD 427
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL- 503
V + +L A H G L + ++L + G+ T ++ + G + A L
Sbjct: 428 FVIMINILPAFVHIGAL-ENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLF 486
Query: 504 ALAMPNEANPVVWRTLLAASRLHGN 528
++ + ++W ++++A HG+
Sbjct: 487 EEEKIDDKDLIMWNSMISAHANHGD 511
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 201/416 (48%), Gaps = 22/416 (5%)
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++ +++IH G + + S L++ Y + +L+VF + ++ L+NA++
Sbjct: 39 SIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILR 98
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL---SALIMMGFFKNGRVVHGIVVKMG 265
+ GE + L V+++M + + T VL S+ +GF GR +HG +VK+G
Sbjct: 99 NLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGF---GRTIHGYLVKLG 155
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+D V AL +MY + A ++F+ KD+ +S+ T Q N +G R+F
Sbjct: 156 FDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFG 215
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM++ PD TF +L + L ++ + +H +V+ L+ D+ +N A+
Sbjct: 216 RMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLS--------GDLLVNTAV 267
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ +Y+K S+ DA+ +F KM +KD WNIMI Y +G+ E L++F M + ++ D
Sbjct: 268 LSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDL 327
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
T + V+S+ + + G++ + R G + + +IDM L+ A ++
Sbjct: 328 FTALPVISSIAQLKCVDWGKQTHAHI-LRNGSDSQVSVHNSLIDMYCECKILDSACKIFN 386
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNIYVA 559
M +++ + W ++ +G + + A +F G ++V+M NI A
Sbjct: 387 WMTDKS-VISWSAMIKGYVKNGQS----LTALSLFSKMKSDGIQADFVIMINILPA 437
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 328/605 (54%), Gaps = 20/605 (3%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
+ N TF PF L + CA ++L+ Q IH+++L++ + T+ ++MY K
Sbjct: 50 TPNNSTF--PFVL-------KACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVK 100
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C +++ A VF + ++ ++NAM+ GF + F + HMR G+ PD T
Sbjct: 101 CGRLEDAHNVFVEMPVR-DIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLL 159
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP--L 197
LI V ++ + ++ ++G+ +DV + + L+ Y KC + A +F+E+ L
Sbjct: 160 LIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGL 219
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R VV WN+M+ YA + KA+ ++ M G T+ +LS+ + +G +V
Sbjct: 220 RSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLV 279
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H VK+G DS V V+N LI MY K V A +F M +K SW +++ + + G
Sbjct: 280 HSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYM 339
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ LF+ M +AG +PDLVT ++ C AL G+ I Y + NGL D
Sbjct: 340 SEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLK--------D 391
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+V + NAL+DMY KCG DA+ +F M+ + V SW MI ++G K+AL++F M
Sbjct: 392 NVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMML 451
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
E +KP+ +TF+ VL AC+H G + +G E +M +YG+ P I+HY+C++D+LGR G L
Sbjct: 452 EMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHL 511
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E+ +MP E + +W LL+A +LHG ++ + ++++F+LEP YV M+NIY
Sbjct: 512 REALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIY 571
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ +E V IR M+ VRK+PG S I++ F DR HPE IY L LT
Sbjct: 572 ASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGLT 631
Query: 618 ARLRE 622
+R ++
Sbjct: 632 SRSKK 636
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 234/490 (47%), Gaps = 18/490 (3%)
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+FT+N+ + A L F M+Q G+ P+ TFP ++K C + + + IH
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K ++++ +A V+ Y+KC +E+A VF E+P+RD+ WNAM+ G+AQ G +
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ R M GI TV ++ +++ + + V+ +++G V V N LI
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIA 197
Query: 279 MYGKGKCVGEALEIFEMMEE--KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
Y K + A +F+ + + + SWNS++ + H + + ML GF PD+
Sbjct: 198 AYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDI 257
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +L +C AL HG +H + V G C DV + N L+ MY+KCG +
Sbjct: 258 STILNLLSSCMQPKALFHGLLVHSHGVKLG------CD--SDVCVVNTLICMYSKCGDVH 309
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F MS K SW +MI Y G EA+ +F+ M A KPD VT + ++S C
Sbjct: 310 SARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCG 369
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+G L G+ ++ G+ + +IDM + G N+A EL M N V W
Sbjct: 370 QTGALELGK-WIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANR-TVVSW 427
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTM 573
T++ A L+G D+ + LE G N++ + A GG E L+ + M
Sbjct: 428 TTMITACALNG--DVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMM 485
Query: 574 RQQNVRKNPG 583
Q+ NPG
Sbjct: 486 TQK-YGINPG 494
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 315/566 (55%), Gaps = 11/566 (1%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+H F LQ C +L+ G +H+Y+++ I L L+++Y K + +A
Sbjct: 54 DHSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHA 113
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDF-AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
+F+ + +V ++N MIS N++ A + ++ M++ V P+ TF LI C
Sbjct: 114 HQLFDTMP-RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACD 172
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
++A+ H + GL + ++GS+LV+ Y K +E+A+K F E+ D+V WN
Sbjct: 173 GLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNI 232
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
M++G A+ A+ +F +M K + + FT+T ++ G K+G HG +K+G
Sbjct: 233 MIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLG 292
Query: 266 YDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
P+ NALI MY K K V ++IF + E +I SW ++++ Q ++ + LF
Sbjct: 293 LAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLF 352
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
ML G + + +FS++LP +LA L G+QIH I+ + D+ +NNA
Sbjct: 353 KEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGL--------DLSVNNA 404
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY+KCGS+ DA +VF KM K DV S MI+ YG G+GKEAL++ + M L PD
Sbjct: 405 LIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPD 464
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VTF+G L ACSH G + +G +M + + P EH+ CV+DMLGRAG+LNEA
Sbjct: 465 GVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFI 524
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
M E++ +VW TLL A R+HG L E +AQ++ +L+PG G YVL++NIY G +E
Sbjct: 525 DEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWE 584
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELK 590
+ + +R + ++K GCSW+ L+
Sbjct: 585 DKVMVREKLVSHGLKKQVGCSWVALE 610
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/618 (32%), Positives = 326/618 (52%), Gaps = 50/618 (8%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN- 103
+ +L G+ +H+ +++ + S +N+YSKC + YA F++ EPNVF+YN
Sbjct: 21 ERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTE-EPNVFSYNV 79
Query: 104 ------------------------------AMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ISG+ + F MR+LG D
Sbjct: 80 IVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVD 139
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+T LI CCD + + +K++H G D + +A V Y K + EA+ VF
Sbjct: 140 GFTLSGLIAACCDRVDL--IKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 194 ELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ LRD V WN+M+ Y Q E KAL +++ M +G + FT+ VL+AL +
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG-----EALEIFEMMEEKDIFSWNSI 307
GR HG ++K G+ V + LID Y K C G ++ ++F+ + D+ WN++
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSK--CGGRDGMSDSEKVFQEILSPDLVLWNTM 315
Query: 308 MTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + H + ++ F +M G +PD +F V ACS+L++ G+QIHG + +
Sbjct: 316 ISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSN 375
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ N + +NNAL+ +Y K G++ DA+ VF +M + + S+N MI GY G G
Sbjct: 376 IPSN-------RISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
EAL ++ M ++ + P+ +TFV +LSAC+H G + +G+++ M+ + + P EHY+C
Sbjct: 429 TEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSC 488
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
+ID+LGRAG+L EA AMP + V W LL A R H N LAE AA+ + ++P
Sbjct: 489 MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLA 548
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
YV+++N+Y GK+EE+ +R +MR + +RK PGCSWIE+K H F++ D SHP
Sbjct: 549 ATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMI 608
Query: 607 KSIYAELHSLTARLREHG 624
+ + L + ++++ G
Sbjct: 609 REVNEYLEEMMKKMKKVG 626
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 172/334 (51%), Gaps = 12/334 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALF 88
FTL+ IA+ C + +L K ++H + + +G DS S+ + + YSK ++ A+
Sbjct: 141 FTLSGLIAA---CCDRVDLIK--QLHCFAV-SGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++N+MI + + K L + M G D +T ++ +
Sbjct: 195 VFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC---QFMEEALKVFEELPLRDVVLWNA 205
++ ++ HG + K G + ++GS L++ Y KC M ++ KVF+E+ D+VLWN
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNT 314
Query: 206 MVNGYAQIGEF-HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M++GY+ E +A++ FR+M + G + V SA + G+ +HG+ +K
Sbjct: 315 MISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKS 374
Query: 265 GYDSG-VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
S + V NALI +Y K + +A +F+ M E + S+N ++ + Q G+ LRL
Sbjct: 375 NIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRL 434
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+ RML +G P+ +TF +L AC+H + G++
Sbjct: 435 YQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK 468
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 338/580 (58%), Gaps = 19/580 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L+ Q+ H+ +L G +P T LI+ Y+ + VF++L + +V+ +N++I
Sbjct: 42 SLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFK-SVYLWNSLI 100
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+GF N + +F M GVL D YT + K C ++ + K IHG K G
Sbjct: 101 NGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFV 160
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE--FHKALEVF- 223
LDV + ++L++ Y KC E LK+F+E+P R+V WN +++GYA G+ F K + F
Sbjct: 161 LDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSGFV 220
Query: 224 RRMSKEGIWMSRFTVTGVLSALI-MMGFFKNGRVVHGIVVKM----GYDSGVPVMNALID 278
+ M EG+ FTV+ +L+ MG +GR +HG +V++ G + V + LID
Sbjct: 221 KDMQIEGLKPDAFTVSSLLTLCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCCLID 280
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLV 337
MY + V +F+ ME +++++W +++ H Q G + L LF M + G +P+ V
Sbjct: 281 MYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEPNKV 340
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ +VLPACS +A L +QIHGY + +DV + NAL+DMY+KCGS+
Sbjct: 341 SLVSVLPACSAVAGLTGVKQIHGYAIRKQFN--------NDVSLCNALIDMYSKCGSLDH 392
Query: 398 AQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF S ++D SW+ MI GYG+ G+G+EA+ +++ M + KPD +T VGVLSACS
Sbjct: 393 AKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACS 452
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+G + +G ++Y + PT+E CV+DMLGR+GQL +A + MP E +P VW
Sbjct: 453 RAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVW 512
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+++AS +HGN+++ ++A + + QLEP + NYV +SN++ + +++ V ++R M+ +
Sbjct: 513 GAVVSASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDR 572
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
+ K PGCSWI + + H F ++D+ HP +KSIY L L
Sbjct: 573 CLTKTPGCSWISINNTTHFFYAADKLHPCSKSIYELLGGL 612
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 317/597 (53%), Gaps = 23/597 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ L C+ + L G+ IH + G+ + ++L++MY +C ++ A +F +L
Sbjct: 132 VSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLER 191
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLEV 153
+V +NAMI+ N + L+ F M QLG+ PD TF + K C + +V
Sbjct: 192 HLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQV 251
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K H + + GL DV + +ALVN Y +C ++ A + F +P R+ V W +M+ +AQI
Sbjct: 252 KGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQI 311
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G A+E F M EG+ +R T+ +AL R+V I ++G + V ++
Sbjct: 312 GHL-LAVETFHAMLLEGVVPTRSTL---FAALEGCEDLHTARLVEAIAQEIGVATDVAIV 367
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS-----IMTVHEQCGNHDGTLRLFDRML 328
L+ Y + +A+ +F EE + W++ ++ V+ QC + T +L+ +
Sbjct: 368 TDLVMAYARCDGQEDAIRVFSAREEGE---WDAALVTAMIAVYAQCRDRRSTFKLWGAAI 424
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMD 387
G PD + + T L AC+ LAAL GRQIH + + + +D DV + NA++
Sbjct: 425 ERGISPDRILYITALDACASLAALSEGRQIHACVAAD--------RRLDRDVTLGNAIVS 476
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY +CGS+RDA+ F M +D SWN M+ G+ ++ D+F M + + V
Sbjct: 477 MYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVA 536
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ +LSAC+H+G + G E M +GVVP EHY C++D+LGR G+L +A+ + AM
Sbjct: 537 FLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAM 596
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P + W L+ A R++G+T+ AA+RV +L H YV + NIY A G++E+
Sbjct: 597 PVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGRWEDAA 656
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M +RK PG S IE++ +H F+ DRSHP++++IYAEL + + G
Sbjct: 657 AVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIERAG 713
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 201/465 (43%), Gaps = 19/465 (4%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+SL+ MY +C ++ A+ VF+ ++ ++ + +IS + S + + F+ + Q G+
Sbjct: 66 SSLVYMYLRCGSLESAIDVFHKIA-HKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGI 124
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D F ++ C + + IH + GL L + SALV+ Y +C + +A
Sbjct: 125 ALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANA 184
Query: 191 VFEELPLR-DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F L DVVLWNAM+ +Q G +ALE+F RM + GI T V A
Sbjct: 185 LFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSP 244
Query: 250 FFKNGRV--VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ +V H + + G S V V AL++ Y + + A E F M E++ SW S+
Sbjct: 245 SLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSM 304
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ Q G H + F ML G P T L C L H +V +
Sbjct: 305 IAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAALEGCEDL---------HTARLVEAI 354
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQ 425
A+ DV + L+ Y +C DA VF+ + D A MI Y
Sbjct: 355 AQEIGVA--TDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRD 412
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+ ++ E + PD + ++ L AC+ LS+GR+ + + + +
Sbjct: 413 RRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGN 472
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
++ M G+ G L +A + MP + + W +L+AS HG +
Sbjct: 473 AIVSMYGQCGSLRDARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 8/289 (2%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D Y+ S+LV YL+C +E A+ VF ++ + +VLW +++ Y G A+ +F R+
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EGI + VLSA F GR++H V+ G V +AL+ MYG+ +
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180
Query: 288 EALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A +F +E D+ WN+++T + Q G+ L +F RML G PDLVTF +V AC
Sbjct: 181 DANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKAC 240
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S +L Q+ G+ GS DV + AL++ Y +CG + A+ F M
Sbjct: 241 SSSPSL-RASQVKGFHTCLDETGLGS-----DVVVATALVNAYARCGEIDCAREFFAAMP 294
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+++ SW MI + G A++ F M + P T L C
Sbjct: 295 ERNAVSWTSMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGC 342
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D ++ ++L+ MY +CGS+ A VF K++ K + W ++I Y G A+ +F +
Sbjct: 61 DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ + D + FV VLSACS FL+ GR +E+ G+ + + ++ M GR G
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVA--SALVSMYGRCGS 178
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
L +A L + + V+W ++ A+ +G+ A R+ QL
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQL 224
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 330/585 (56%), Gaps = 13/585 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA G +H+ L+TG++ + +IN+YSKC + +A +F+ +S + N
Sbjct: 10 LHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMS-DRN 68
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +++A+ISG+ L+ F+ MR ++P++Y F +I C + A+ + ++H
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
KLG ++ +AL++ Y+KC +AL V + + V +NA++ G+ + + K
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+E F+ M ++G RFT +G+L F G +H ++K+ + + N +I
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF-QPDLV 337
MY K + EA ++F +++EKD+ SWN+++T C +H+ LR+F ML F +PD
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDF 305
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF+ VL AC+ LA++ HG+QIHG+++ + DV ++NAL++MY KCGS+++
Sbjct: 306 TFAGVLAACAGLASIRHGKQIHGHLI--------RTRQYQDVGVSNALVNMYAKCGSIKN 357
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
+ VF + S +++ SWN +I +G G G AL+ F M + PD VTFVG+L+AC+H
Sbjct: 358 SYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNH 417
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + +G+ + ME YG+ P IEH++C+ID+LGRAG+L EA E +P +P++
Sbjct: 418 AGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILG 477
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL+A RLHG+ + E A ++ +L+P YVL+SN+Y + + V + ++
Sbjct: 478 SLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSG 537
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
++K PG S I++ F D SH + I + L + E
Sbjct: 538 LKKEPGHSLIDVMGMFEKFTMGDLSHSRIEEIKDTIKMLNWTVSE 582
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 190/390 (48%), Gaps = 16/390 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+ C + A L +H K G+ D+ + + ++N Y KC + A ++F+E+ R+
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V W+A+++GY Q G+ AL +F +M I + + V+SA + G VH
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+K+G S V NALI MY K +AL + +M E + S+N+++ + +
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ F M GF PD TFS +L C+ G Q+H ++ L D
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLE--------DSA 237
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ N ++ MY+K + +A+ VF + +KD+ SWN ++ + AL +F M +
Sbjct: 238 FIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDV 297
Query: 440 -KLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+KPD+ TF GVL+AC+ + G++ L+ +R + +++M + G +
Sbjct: 298 CFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQ--YQDVGVSNALVNMYAKCGSI 355
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHG 527
+Y++ ++ N V W T++AA HG
Sbjct: 356 KNSYDV-FRRTSDRNLVSWNTIIAAFGNHG 384
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 298/485 (61%), Gaps = 8/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C AV+E K HG + ++ L+ DV + + L+N Y KC F+E A +VF+ + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Y + +AL++F M EG S FT++ VLSA + + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ VK D + V AL+D+Y K + +A+++FE M++K +W+S++ + Q N++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ R + + T S+V+ ACS+LAAL+ G+Q+H I +G N V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN--------V 298
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ ++ +DMY KCGS+R++ ++F+++ +K++ WN +I G+ + KE + +F M +
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ P+EVTF +LS C H+G + +GR F LM + YG+ P + HY+C++D+LGRAG L+E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AYEL ++P + +W +LLA+ R++ N +LAE+AA+++F+LEP + GN+VL+SNIY A
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
++EE+ R +R +V+K G SWI++KD +HTF + HP + I + L +L +
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 538
Query: 620 LREHG 624
R+ G
Sbjct: 539 FRKFG 543
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 174/319 (54%), Gaps = 1/319 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA + + + H ++R + + LIN YSKC ++ A VF+ + E +
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LERS 126
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI + N + LD F MR G ++T ++ C LE KK+H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K +DL++Y+G+AL++ Y KC +++A++VFE + + V W++MV GY Q + +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL ++RR + + ++FT++ V+ A + G+ +H ++ K G+ S V V ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + E+ IF ++EK++ WN+I++ + + LF++M G P+ VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 339 FSTVLPACSHLAALMHGRQ 357
FS++L C H + GR+
Sbjct: 367 FSSLLSVCGHTGLVEEGRR 385
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 10/308 (3%)
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+R V +L G + HG ++++ + V ++N LI+ Y K V A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M E+ + SWN+++ ++ + L +F M + GF+ T S+VL AC +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+++H V +C D+ ++++ AL+D+Y KCG ++DA VF M K +W
Sbjct: 180 ECKKLHCLSV-------KTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+ M+ GY + +EAL ++ L+ ++ T V+ ACS+ L +G++ ++
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI-C 290
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G + + +DM + G L E+Y + + E N +W T+++ H
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHARPKEVM 349
Query: 534 IAAQRVFQ 541
I +++ Q
Sbjct: 350 ILFEKMQQ 357
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 309/552 (55%), Gaps = 39/552 (7%)
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
+A+ S SNDF + + + M G PD + FP ++K + + ++IH K
Sbjct: 62 DALRSRTRSNDFR-EAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVK 120
Query: 163 LGL-DLDVYIGSALVNTYLKC------QFMEEAL--------------KVFEELPLRDVV 201
G V + + LVN Y KC F AL +FE RD+V
Sbjct: 121 FGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 180
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN M++ ++Q F +AL FR M EG+ + T+ VL A + G+ +H V
Sbjct: 181 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 240
Query: 262 VKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++ V +AL+DMY + V +F+ + + I WN++++ + + G +
Sbjct: 241 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKA 300
Query: 321 LRLFDRMLS-AGFQPDLVTFSTVLPACSH-LAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
L LF M+ AG P+ T ++V+PAC H LAA+ G++IH Y + N LA D
Sbjct: 301 LILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLA--------SD 352
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + +AL+DMY KCG + ++ VF +M K+V +WN++I+ GM G+G+EAL++F M
Sbjct: 353 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 412
Query: 439 -----AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+ KP+EVTF+ V +ACSHSG +S+G M+ +GV PT +HY CV+D+LGR
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 472
Query: 494 AGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
AGQL EAYEL MP E + V W +LL A R+H N +L E+AA+ + LEP +YVL
Sbjct: 473 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 532
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNIY + G + + +++R MRQ V+K PGCSWIE +D +H F++ D SHP+++ ++
Sbjct: 533 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGF 592
Query: 613 LHSLTARLREHG 624
L +L+ ++R+ G
Sbjct: 593 LETLSEKMRKEG 604
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 32/360 (8%)
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P R W + + +F +A+ + M+ G F VL A+ + K G
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 256 VVHGIVVKMGY-DSGVPVMNALIDMYGKGKCVG--------------------EALEIFE 294
+H VK GY S V V N L++MYGK +G ++ +FE
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
++D+ SWN++++ Q L F M+ G + D VT ++VLPACSHL L
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G++IH Y++ N I++ F+ +AL+DMY C + + VF + + + WN
Sbjct: 233 GKEIHAYVLRNN-------DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 285
Query: 415 IMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHS-GFLSQGREFLPLME 472
MI GY +G ++AL +F M + A L P+ T V+ AC HS +++G+E +
Sbjct: 286 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKE-IHAYA 344
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
R + I + ++DM + G LN + + MPN+ N + W L+ A +HG + A
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKGEEA 403
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 174/365 (47%), Gaps = 33/365 (9%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMY 77
T SG + N F A L+ + +L+ G++IH+ ++ G S +++ +L+NMY
Sbjct: 84 TVSGARPDNFAFP-----AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMY 138
Query: 78 SKCCQMKYALFVFNNLSC-------------------EPNVFTYNAMISGFYSNDFAFKG 118
KC + F N L + ++ ++N MIS F +D +
Sbjct: 139 GKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEA 198
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVN 177
L FF M GV D T ++ C + + K+IH V + L + ++GSALV+
Sbjct: 199 LAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVD 258
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK-EGIWMSRF 236
Y C+ +E +VF+ + R + LWNAM++GYA+ G KAL +F M K G+ +
Sbjct: 259 MYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTT 318
Query: 237 TVTGVLSALI-MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ V+ A + + G+ +H ++ S + V +AL+DMY K C+ + +F
Sbjct: 319 TMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNE 378
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-----FQPDLVTFSTVLPACSHLA 350
M K++ +WN ++ G + L LF M++ +P+ VTF TV ACSH
Sbjct: 379 MPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSG 438
Query: 351 ALMHG 355
+ G
Sbjct: 439 LISEG 443
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 326/589 (55%), Gaps = 19/589 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C ++++ ++IH+ +L T I P S + + YA F+N+ +P
Sbjct: 39 LQQC---LSIKQLKQIHAQLL-TNSIHKP---NSFLYKIADLKDFAYASVFFSNI-LDPT 90
Query: 99 VFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+++N MI G + + + L+F++ M+ LG+ P+ T+P L C +++AV + H
Sbjct: 91 EYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V + GLD D ++ +L+ Y +C M +A KVF+E+ +D+V WN+M++GY+++
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAG 210
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +FR M + G + ++ VL A +G K G V VV+ + +ALI
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MYGK + A IF+ M++KD +WN+++T + Q G + ++LF M + PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +L AC+ + AL G+Q+ Y G DDV++ AL+DMY KCGS+ +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQ--------DDVYVGTALVDMYAKCGSLDN 382
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSAC 455
A VF M K+ SWN MI GQ +EAL +F M + P+++TFVGVLSAC
Sbjct: 383 AFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
H+G + +GR +M S +G+VP IEHY+C++D+ RAG L EA++ + MP + + V+
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVI 502
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
LL A + N D++E + + +LEP + GNYV+ S +Y ++++ +R M+Q
Sbjct: 503 LGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQ 562
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWI++ LH F + D H E I+ L L LR G
Sbjct: 563 KGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREG 611
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 137/269 (50%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ ++ L C +L+ G + +++ + + ++LI+MY KC + A +F+++
Sbjct: 230 SLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSM 289
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V T+NAMI+G+ N + + + F MR PD+ T ++ C + A+
Sbjct: 290 KKKDKV-TWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLG 348
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++ + G DVY+G+ALV+ Y KC ++ A +VF +P ++ V WNAM++ A
Sbjct: 349 KQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFH 408
Query: 214 GEFHKALEVFRRMSKEGIWMS--RFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ +AL +F+ M EG +S T GVLSA + G G R+ H + G +
Sbjct: 409 GQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKI 468
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D++ + + EA + M EK
Sbjct: 469 EHYSCMVDLFSRAGHLEEAWDFVMTMPEK 497
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I L CA L G+++ Y G D T+L++MY+KC + A VF +
Sbjct: 331 TLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVL 151
N ++NAMIS + A + L F M G V P+ TF ++ C V
Sbjct: 391 P-NKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449
Query: 152 EVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E +++ H + GL + S +V+ + + +EEA +P + D V+ A++
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALL 507
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 321/599 (53%), Gaps = 24/599 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + +L +CA +++ + IHS + +G+ + + T+L + Y++ + A VF+
Sbjct: 230 TLVITLSVCA---KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDR- 285
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E +V ++NAM+ + + + F M G+ P K T L+ ++
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT---LVNASTGCSSLRFG 342
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH + GLD D+ +G+AL++ Y +C EEA +FE +P + V WN M+ G +Q
Sbjct: 343 RMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQK 401
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM----MGFFKNGRVVHGIVVKMGYDSG 269
G+ +ALE+F+RM EG+ R T +L A+ GR +H +V GY S
Sbjct: 402 GQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASE 461
Query: 270 VPVMNALIDMYGKGKCVGEALEIFE---MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ A++ MY + EA F+ M + D+ SWN+I++ Q G+ L F R
Sbjct: 462 PAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRR 521
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M G P+ +T VL AC+ AAL G +H ++ +G+ N VF+ AL
Sbjct: 522 MDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESN--------VFVATALA 573
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
MY +CGS+ A+ +F K++ ++DV +N MI Y +G EAL +F M + +PDE
Sbjct: 574 SMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDE 633
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+FV VLSACSH G +G E M YG+ P+ +HY C +D+LGRAG L +A EL
Sbjct: 634 QSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIR 693
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
M + +VW+TLL A R + + D +A V +L+PG YV++SNI GK++E
Sbjct: 694 CMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDE 753
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++R M + +RK G SWIE+K +H F++ DRSHP ++ IY EL L A +RE G
Sbjct: 754 AAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/501 (28%), Positives = 244/501 (48%), Gaps = 25/501 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A L+ CA +L +G+ IH++++ +G+ + L+++Y C + A+ +F +
Sbjct: 130 TFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM 189
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E ++ ++NA I+ + L+ F M+ GV P + T + C + +
Sbjct: 190 --ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---QA 244
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH +V + GL+ + + +AL + Y + +++A +VF+ RDVV WNAM+ YAQ
Sbjct: 245 RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQH 304
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A +F RM EGI S+ T+ + + F GR++H ++ G D + +
Sbjct: 305 GHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRDIVLG 361
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+DMY + EA +FE + + SWN+++ Q G L LF RM G
Sbjct: 362 NALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMA 420
Query: 334 PDLVTFSTVLPACS----HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P T+ +L A + A+ GR++H IV SC + + A++ MY
Sbjct: 421 PVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV--------SCGYASEPAIGTAVVKMY 472
Query: 390 TKCGSMRDAQMVFTKMS---KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
CG++ +A F + + + DV SWN +I G GK AL F M + P+++
Sbjct: 473 ASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQI 532
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T V VL AC+ + L++G + G+ + T + M GR G L A E+
Sbjct: 533 TCVAVLDACAGAAALTEGVIVHDHLR-HSGMESNVFVATALASMYGRCGSLESAREIFEK 591
Query: 507 MPNEANPVVWRTLLAASRLHG 527
+ E + V++ ++AA +G
Sbjct: 592 VAVERDVVIFNAMIAAYSQNG 612
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 150/522 (28%), Positives = 250/522 (47%), Gaps = 34/522 (6%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
S+SSG H L L+ L +G+ IH+ ++ G+ + L L+ +Y
Sbjct: 21 SSSSGATRPAHLVRL------LRAAGDDRLLSQGRRIHARIVSLGL-EEELG-NHLLRLY 72
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
KC + VF+ L ++ +I+ + + A + + F+ M+Q GV D TF
Sbjct: 73 LKCESLGDVEEVFSRLEVRDEA-SWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTF 131
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
++K C + + + + IH + + GL+ + + L++ Y C + A+ +FE +
Sbjct: 132 LAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME- 190
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD+V WNA + AQ G+ ALE+F+RM EG+ +R T+ LS + + R +
Sbjct: 191 RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLS---VCAKIRQARAI 247
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H IV + G + + V AL Y + + +A E+F+ E+D+ SWN+++ + Q G+
Sbjct: 248 HSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
LF RML G P VT CS +L GR IH + GL +
Sbjct: 308 SEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDR-------- 356
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+ + NAL+DMYT+CGS +A+ +F + V SWN MI G GQ K AL++F M
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQKGQMKRALELFQRMQ 415
Query: 438 EAKLKPDEVTFVGVLSACS----HSGFLSQGREFLPLMES-RYGVVPTIEHYTCVIDMLG 492
+ P T++ +L A + + +++GR+ + S Y P I T V+ M
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI--GTAVVKMYA 473
Query: 493 RAGQLNEAYE--LALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G ++EA AM + + V W ++++ HG+ A
Sbjct: 474 SCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 193/404 (47%), Gaps = 21/404 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ D + + ++IH + LGL+ + +G+ L+ YLKC+ + + +VF L +RD
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
W ++ Y + G+ +A+ +F RM +EG+ T VL A +G GR +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+V+ G + + N L+ +YG CV A+ +FE M E+D+ SWN+ + + Q G+ D
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDM 211
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF RM G +P +T L C A + R IH + +GL + +
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVC---AKIRQARAIHSIVRESGLEQT--------L 260
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
++ AL Y + G + A+ VF + +++DV SWN M+ Y G EA +F+ M
Sbjct: 261 VVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ P +VT V + CS F GR + G+ I ++DM R G E
Sbjct: 321 GIPPSKVTLVNASTGCSSLRF---GR-MIHACALEKGLDRDIVLGNALLDMYTRCGSPEE 376
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
A L +P N V W T++A S G A QR QLE
Sbjct: 377 ARHLFEGIPG--NAVSWNTMIAGSSQKGQMKRALELFQR-MQLE 417
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 331/631 (52%), Gaps = 51/631 (8%)
Query: 33 ATCIASLQLCA---HQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALF 88
AT + L +CA + G+E+H ++LR +++ I SL++ Y + QM+ A F
Sbjct: 244 ATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEF 303
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDV 147
+F N+ ++ ++NA+I+G+ SN K L+ F+ L + PD T ++ C V
Sbjct: 304 LFRNMKSR-DLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHV 362
Query: 148 MAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ K IHG + + GL D +G+AL++ Y KC + + AL+ F + +D++ WNA+
Sbjct: 363 HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAI 422
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ + + G + + M +EGI T+ ++ + K + H ++ G
Sbjct: 423 LDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGL 482
Query: 267 ---DSGVPVMNALIDMYGK--------------------------------GKCVGEALE 291
D+G + N ++D Y K +A
Sbjct: 483 LQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYA 542
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
IF M E D+ +WN ++ V+ + D L LF + G +PD+VT ++LPAC+H+A+
Sbjct: 543 IFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMAS 602
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+ RQ HGY++ +C +DV +N A +DMY+KCGS+ A +F +KD+
Sbjct: 603 VHMLRQCHGYVI-------RAC--FNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLV 653
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+ M+ G+ M G G+EAL +FS M E +KPD V VL ACSH+G + +G + +
Sbjct: 654 MFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSI 713
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
E +G PT+E Y CV+D+L R G++ +AY MP EAN +W TLL A R H +L
Sbjct: 714 EKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVEL 773
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ A +F++E + GNYV+MSN+Y A +++ V++IR MR + ++K GCSWIE+
Sbjct: 774 GRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGR 833
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ FI+ D SHP+ IY L +L ++E
Sbjct: 834 RKNVFIAGDSSHPQRSIIYRTLSTLDQLMKE 864
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 271/569 (47%), Gaps = 69/569 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC---CQMKYALFVFNNLSC 95
L +CA + G+ +HSY++++G+ L+ +LI+MY+KC C YA FN +
Sbjct: 149 LPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA--AFNRIEF 205
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
+ +V ++NA+I+GF N F + F+ M + + P+ T ++ C +
Sbjct: 206 K-DVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRY 264
Query: 153 VKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H V + + L DV + ++L++ YL+ ME+A +F + RD+V WNA++ GYA
Sbjct: 265 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 324
Query: 212 QIGEFHKALEVFRR-MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSG 269
GE+ KALE+F +S E I T+ VL A + + + +HG +++ G
Sbjct: 325 SNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRED 384
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V NAL+ Y K AL+ F M+ KD+ SWN+I+ + G + L ML
Sbjct: 385 TSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLR 444
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD +T T++ + ++ + ++ H Y + GL + + + N ++D Y
Sbjct: 445 EGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPT-----LGNGMLDAY 499
Query: 390 TKCGSMR--------------------------------DAQMVFTKMSKKDVASWNIMI 417
KCG+M+ DA +F MS+ D+ +WN+M+
Sbjct: 500 AKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMV 559
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
Y + +AL +F + +KPD VT + +L AC+H + R+ +G
Sbjct: 560 RVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC-------HGY 612
Query: 478 V-----PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
V + IDM + G + AY+L L+ P + + V++ ++ +HG +
Sbjct: 613 VIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHGMGE-- 669
Query: 533 EIAAQRVFQ--LEPGHCGNYVLMSNIYVA 559
A R+F LE G ++V+++ + A
Sbjct: 670 --EALRIFSYMLELGVKPDHVIITAVLFA 696
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 16/345 (4%)
Query: 121 FFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F +R +G P+ L+K C + A+ +HG KLG + L+N Y
Sbjct: 25 FLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLY 84
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA--LEVFRRMSKEGIWMSRFT 237
K ++ K+F E+ RD V+WN +++G A + H+A + +FR M
Sbjct: 85 AKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGF-QSHEAEVMRLFRAMHMVNEAKPNSV 143
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMM 296
++ + G+ VH V+K G +S NALI MY K G +A F +
Sbjct: 144 TIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRI 203
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL---AALM 353
E KD+ SWN+++ + + +LF ML QP+ T +++LP C+ L A
Sbjct: 204 EFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYR 263
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+G+++H +++ + ++DV + N+LM Y + G M A+ +F M +D+ SW
Sbjct: 264 YGKEVHCHVLRR-------MELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSW 316
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSH 457
N +I GY +G+ +AL++FS + +KPD VT V VL AC+H
Sbjct: 317 NAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAH 361
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/564 (23%), Positives = 260/564 (46%), Gaps = 40/564 (7%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C + ++ G +H Y L+ G + L+N+Y+K + Y +F +
Sbjct: 44 ALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQR 103
Query: 97 PNVFTYNAMISG---FYSNDFA----FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
V +N ++SG F S++ F+ + N + P+ T ++ C +
Sbjct: 104 DPVI-WNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAK-----PNSVTIAIVLPVCARLRE 157
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM-EEALKVFEELPLRDVVLWNAMVN 208
K +H V K GL+ G+AL++ Y KC + +A F + +DVV WNA++
Sbjct: 158 DAG-KSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIA 216
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL---SALIMMGFFKNGRVVH-GIVVKM 264
G+++ +A ++F M K I + T+ +L ++L ++ G+ VH ++ +M
Sbjct: 217 GFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRM 276
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
V V+N+L+ Y + + +A +F M+ +D+ SWN+I+ + G L LF
Sbjct: 277 ELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELF 336
Query: 325 DRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN-GLAKNGSCKDIDDVFMN 382
+S +PD VT +VLPAC+H+ L + IHGYI+ + GL +D +
Sbjct: 337 SEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLR--------EDTSVG 388
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NAL+ Y KC + A F +S+KD+ SWN ++ + G +++ M ++
Sbjct: 389 NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIR 448
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV-----PTIEHYTCVIDMLGRAGQL 497
PD +T + ++ + + + +E R+G++ PT+ + ++D + G +
Sbjct: 449 PDSITILTIIQYYAAVSRVKKVKETHSY-SIRFGLLQGDAGPTLGN--GMLDAYAKCGNM 505
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
A + ++ + N V ++++ + N+ + A + + LM +Y
Sbjct: 506 KYAVNIFGSLSEKRNVVTCNSMISG---YVNSSSHDDAYAIFNTMSETDLTTWNLMVRVY 562
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKN 581
++ L + H ++ Q ++ +
Sbjct: 563 AENDFPDQALSLFHELQGQGMKPD 586
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 18/297 (6%)
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ +L + + + + G V+HG +K+G+ S + L+++Y K + ++F M+
Sbjct: 42 LAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMD 101
Query: 298 EKDIFSWNSIMTVHEQCGNHDG-TLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHG 355
++D WN +++ +H+ +RLF M + +P+ VT + VLP C+ L G
Sbjct: 102 QRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLREDA-G 160
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM-RDAQMVFTKMSKKDVASWN 414
+ +H Y++ +GL + NAL+ MY KCG + DA F ++ KDV SWN
Sbjct: 161 KSVHSYVIKSGLESH--------TLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWN 212
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS----HSGFLSQGREFLPL 470
+I G+ + +EA +F M + ++P+ T +L C+ ++G+ G+E
Sbjct: 213 AVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGY-RYGKEVHCH 271
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R +V + ++ R GQ+ +A L M + + V W ++A +G
Sbjct: 272 VLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSR-DLVSWNAIIAGYASNG 327
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 312 EQCGNHDGTLRLFDRML--SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
E+ HD L LF + S G++P+ + +L +C ++A+ G +HGY + G
Sbjct: 13 ERWLRHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLG--- 69
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY-GMDGQGKE 428
+ SC+ + L+++Y K G++ +F +M ++D WNI++ G G E
Sbjct: 70 HVSCQS-----LCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAE 124
Query: 429 ALDMFSCMCEA-KLKPDEVTFVGVLSACS 456
+ +F M + KP+ VT VL C+
Sbjct: 125 VMRLFRAMHMVNEAKPNSVTIAIVLPVCA 153
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM--KYALFV 89
+ T ++ L CAH ++ ++ H Y++R D L+ + I+MYSKC + Y LF+
Sbjct: 587 IVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLN-GAFIDMYSKCGSVFGAYKLFL 645
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
S + ++ + AM+ GF + + L F++M +LGV PD ++ C
Sbjct: 646 S---SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGL 702
Query: 150 VLE-------VKKIHGL 159
V E ++K+HG
Sbjct: 703 VDEGWKIFNSIEKVHGF 719
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 331/631 (52%), Gaps = 51/631 (8%)
Query: 33 ATCIASLQLCA---HQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALF 88
AT + L +CA + G+E+H ++LR +++ I SL++ Y + QM+ A F
Sbjct: 183 ATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEF 242
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDV 147
+F N+ ++ ++NA+I+G+ SN K L+ F+ L + PD T ++ C V
Sbjct: 243 LFRNMKSR-DLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHV 301
Query: 148 MAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ K IHG + + GL D +G+AL++ Y KC + + AL+ F + +D++ WNA+
Sbjct: 302 HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAI 361
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ + + G + + M +EGI T+ ++ + K + H ++ G
Sbjct: 362 LDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGL 421
Query: 267 ---DSGVPVMNALIDMYGK--------------------------------GKCVGEALE 291
D+G + N ++D Y K +A
Sbjct: 422 LQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYA 481
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
IF M E D+ +WN ++ V+ + D L LF + G +PD+VT ++LPAC+H+A+
Sbjct: 482 IFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMAS 541
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+ RQ HGY++ +C +DV +N A +DMY+KCGS+ A +F +KD+
Sbjct: 542 VHMLRQCHGYVI-------RAC--FNDVRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLV 592
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+ M+ G+ M G G+EAL +FS M E +KPD V VL ACSH+G + +G + +
Sbjct: 593 MFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSI 652
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
E +G PT+E Y CV+D+L R G++ +AY MP EAN +W TLL A R H +L
Sbjct: 653 EKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVEL 712
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ A +F++E + GNYV+MSN+Y A +++ V++IR MR + ++K GCSWIE+
Sbjct: 713 GRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRTRELKKPAGCSWIEVGR 772
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ FI+ D SHP+ IY L +L ++E
Sbjct: 773 RKNVFIAGDSSHPQRSIIYRTLSTLDQLMKE 803
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/569 (26%), Positives = 271/569 (47%), Gaps = 69/569 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC---CQMKYALFVFNNLSC 95
L +CA + G+ +HSY++++G+ L+ +LI+MY+KC C YA FN +
Sbjct: 88 LPVCA-RLREDAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYA--AFNRIEF 144
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
+ +V ++NA+I+GF N F + F+ M + + P+ T ++ C +
Sbjct: 145 K-DVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRY 203
Query: 153 VKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H V + + L DV + ++L++ YL+ ME+A +F + RD+V WNA++ GYA
Sbjct: 204 GKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYA 263
Query: 212 QIGEFHKALEVFRR-MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSG 269
GE+ KALE+F +S E I T+ VL A + + + +HG +++ G
Sbjct: 264 SNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRED 323
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V NAL+ Y K AL+ F M+ KD+ SWN+I+ + G + L ML
Sbjct: 324 TSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLR 383
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD +T T++ + ++ + ++ H Y + GL + + + N ++D Y
Sbjct: 384 EGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPT-----LGNGMLDAY 438
Query: 390 TKCGSMR--------------------------------DAQMVFTKMSKKDVASWNIMI 417
KCG+M+ DA +F MS+ D+ +WN+M+
Sbjct: 439 AKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMV 498
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
Y + +AL +F + +KPD VT + +L AC+H + R+ +G
Sbjct: 499 RVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQC-------HGY 551
Query: 478 V-----PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
V + IDM + G + AY+L L+ P + + V++ ++ +HG +
Sbjct: 552 VIRACFNDVRLNGAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHGMGE-- 608
Query: 533 EIAAQRVFQ--LEPGHCGNYVLMSNIYVA 559
A R+F LE G ++V+++ + A
Sbjct: 609 --EALRIFSYMLELGVKPDHVIITAVLFA 635
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 245/528 (46%), Gaps = 40/528 (7%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG---FYSNDFA----FKGLDFFNHM 125
L+N+Y+K + Y +F + V +N ++SG F S++ F+ + N
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVI-WNIVLSGLAGFQSHEAEVMRLFRAMHMVNEA 77
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
+ P+ T ++ C + K +H V K GL+ G+AL++ Y KC +
Sbjct: 78 K-----PNSVTIAIVLPVCARLREDAG-KSVHSYVIKSGLESHTLAGNALISMYAKCGLV 131
Query: 186 -EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL-- 242
+A F + +DVV WNA++ G+++ +A ++F M K I + T+ +L
Sbjct: 132 CSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPV 191
Query: 243 -SALIMMGFFKNGRVVH-GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
++L ++ G+ VH ++ +M V V+N+L+ Y + + +A +F M+ +D
Sbjct: 192 CASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRD 251
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
+ SWN+I+ + G L LF +S +PD VT +VLPAC+H+ L + IH
Sbjct: 252 LVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIH 311
Query: 360 GYIVVN-GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
GYI+ + GL +D + NAL+ Y KC + A F +S+KD+ SWN ++
Sbjct: 312 GYIIRHPGLR--------EDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILD 363
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
+ G +++ M ++PD +T + ++ + + + +E R+G++
Sbjct: 364 AFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSY-SIRFGLL 422
Query: 479 -----PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
PT+ + ++D + G + A + ++ + N V ++++ + N+ +
Sbjct: 423 QGDAGPTLGN--GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISG---YVNSSSHD 477
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A + + LM +Y ++ L + H ++ Q ++ +
Sbjct: 478 DAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPD 525
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM--KYALFV 89
+ T ++ L CAH ++ ++ H Y++R D L+ + I+MYSKC + Y LF+
Sbjct: 526 IVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLN-GAFIDMYSKCGSVFGAYKLFL 584
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
S + ++ + AM+ GF + + L F++M +LGV PD ++ C
Sbjct: 585 S---SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGL 641
Query: 150 VLE-------VKKIHGL 159
V E ++K+HG
Sbjct: 642 VDEGWKIFNSIEKVHGF 658
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 327/602 (54%), Gaps = 14/602 (2%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ CA N+ G+ +H + +++G+I+S ++L++MY K + + VF N++
Sbjct: 157 ALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR- 215
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ A+I G + GL +F+ M + V D +TF +K + + K IH
Sbjct: 216 NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIH 275
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G + Y+ + L Y KC+ + +++F ++ DVV W ++ Y Q+G+
Sbjct: 276 AQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEE 335
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL+ F+RM K + + +T V+SA + K G +HG +++G + V N++I
Sbjct: 336 RALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSII 395
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y K + EA +F+ M KDI SW++I++V+ Q + M G +P+
Sbjct: 396 TLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEF 455
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
++VL C +A L G+Q+H Y + GL + +++AL+ MY++ G++++
Sbjct: 456 ALASVLSVCGSMALLEPGKQVHAYALCIGLDH--------ETMVHSALISMYSRSGNLQE 507
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A +F + D+ SW MI GY G +EA+ +F + L PD VTF+G+L+AC+H
Sbjct: 508 ASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNH 567
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G + G + LM + Y + P+ EHY C+ID+L RAG+L+EA + MP + VVW
Sbjct: 568 AGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWS 627
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A R HG+ D A AA+++ +L P G ++ ++NIY A G+ EE +R M+ +
Sbjct: 628 TLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKG 687
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA--GTLFDSD 635
V K PG SWI D L+TF++ +SHP +K I L L + GD G++ + D
Sbjct: 688 VIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSI---GDARLDFGSIVEDD 744
Query: 636 ST 637
+T
Sbjct: 745 AT 746
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 218/454 (48%), Gaps = 23/454 (5%)
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTF 137
K C+ A +FN +S + ++ +I+G+ + + + L F++M G+ D++
Sbjct: 99 KICE---ARDMFNKMSHRDEI-SWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVV 154
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
+K C M V + +HG K GL V++ SALV+ Y+K E+ VFE +
Sbjct: 155 SVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTT 214
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+VV W A++ G G L F M + + T L A G G+ +
Sbjct: 215 RNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAI 274
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +K G++ V+N L MY K + + +F M D+ SW +++ + Q G+
Sbjct: 275 HAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDE 334
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L F RM + P+ TF++V+ AC++LA G QIHG+ + GL +D
Sbjct: 335 ERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGL--------VD 386
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ ++N+++ +Y+KCG +++A +VF M++KD+ SW+ +I Y KEA + S M
Sbjct: 387 ALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMS 446
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGR 493
KP+E VLS C L G++ Y + ++H T V I M R
Sbjct: 447 REGPKPNEFALASVLSVCGSMALLEPGKQV-----HAYALCIGLDHETMVHSALISMYSR 501
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+G L EA ++ ++ N + V W ++ HG
Sbjct: 502 SGNLQEASKIFDSIKNN-DIVSWTAMINGYAEHG 534
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 6/322 (1%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+H F +A L+ A L G+ IH+ ++ G ++ + +L MYSKC + Y
Sbjct: 252 SHTFAVA-----LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYV 306
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ +F +S P+V ++ +I + + LD F MR+ V P++YTF +I C +
Sbjct: 307 MRLFGKMST-PDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACAN 365
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ ++IHG +LGL + + ++++ Y KC ++EA VF+ + +D++ W+ +
Sbjct: 366 LAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTI 425
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++ Y Q +A MS+EG + F + VLS M + G+ VH + +G
Sbjct: 426 ISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGL 485
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
D V +ALI MY + + EA +IF+ ++ DI SW +++ + + G + LF+
Sbjct: 486 DHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFEN 545
Query: 327 MLSAGFQPDLVTFSTVLPACSH 348
+ S G PD VTF +L AC+H
Sbjct: 546 ISSVGLMPDYVTFIGILTACNH 567
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 129/228 (56%), Gaps = 11/228 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T A+ I++ CA+ + G++IH + LR G++D+ S+I +YSKC ++ A V
Sbjct: 354 YTFASVISA---CANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLV 410
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ ++ ++ +++ +IS + A + ++ + M + G P+++ ++ C MA
Sbjct: 411 FDGMT-RKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGS-MA 468
Query: 150 VLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+LE K++H +GLD + + SAL++ Y + ++EA K+F+ + D+V W AM+N
Sbjct: 469 LLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMIN 528
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA-----LIMMGFF 251
GYA+ G +A+ +F +S G+ T G+L+A L+ +GF+
Sbjct: 529 GYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFY 576
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 198/594 (33%), Positives = 313/594 (52%), Gaps = 52/594 (8%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+++ M++T + I+ S +M YA+ + + PNVF YNAMI GF +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEI-PNVFVYNAMIKGFVQSY 59
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L+ + M + V P YTFP LIK C V + + +HG V++ G D V++ +
Sbjct: 60 QPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQT 119
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+LV+ Y +EE+++VF+E+P RDV W MV+G ++G+ A +F M
Sbjct: 120 SLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP------ 173
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
D + N LID Y + + V A +F
Sbjct: 174 ---------------------------------DRNLATWNTLIDGYARLREVDVAELLF 200
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
M +DI SW +++ + Q L +F+ M G PD VT +TV+ AC+HL AL
Sbjct: 201 NQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALD 260
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G++IH YI+ +G DV++ +AL+DMY KCGS+ + ++F K+ +K++ W
Sbjct: 261 LGKEIHYYIMQHGFNL--------DVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCW 312
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I G + G +EAL MF M K+KP+ VTFV VLSAC+H+G + +GR+ M
Sbjct: 313 NSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTR 372
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ + P +EHY C++D+L +AG L EA +L M E N V+W LL+ +LH N ++A+
Sbjct: 373 DHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQ 432
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN-PGCSWIELKDG 592
+AA ++ LEPG+ G Y L+ N+ ++ E IR TM++Q V K PG SWIE++
Sbjct: 433 VAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQ 492
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG---DCCAGTLFDSDSTASGFEK 643
+H F +SD+SH + IY+ L L +++ G + C + ++ EK
Sbjct: 493 VHQFAASDKSHAASDEIYSLLAELDGQMKLAGYVPELCEAETVEQRRSSISHEK 546
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 179/383 (46%), Gaps = 50/383 (13%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C + L+ + +H ++ R G TSL++ YS +++ ++ VF+ + E +
Sbjct: 87 IKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMP-ERD 145
Query: 99 VFTYNAMISGFYS-NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
VF + M+SG D + G R ++PD+
Sbjct: 146 VFAWTTMVSGLVRVGDMSSAG-------RLFDMMPDR----------------------- 175
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
++ + L++ Y + + ++ A +F ++P RD++ W M+N Y+Q F
Sbjct: 176 ----------NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFR 225
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL VF M+K GI T+ V+SA +G G+ +H +++ G++ V + +ALI
Sbjct: 226 EALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALI 285
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +L +F + EK++F WNS++ G + L +FD+M +P+ V
Sbjct: 286 DMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGV 345
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF +VL AC+H + GR+ + + G V ++D+ +K G + +
Sbjct: 346 TFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPG-------VEHYGCMVDLLSKAGLLEE 398
Query: 398 A-QMVFTKMSKKDVASWNIMILG 419
A Q++ T + + W ++ G
Sbjct: 399 ALQLIRTMKLEPNAVIWGALLSG 421
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 1 MLSKISRINPFSSCFNFSTSSG--NQTFNH-----PFTLATCIASLQLCAHQTNLQKGQE 53
++S + IN +S F + G N+ H T+AT I++ CAH L G+E
Sbjct: 208 IISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISA---CAHLGALDLGKE 264
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH Y+++ G ++LI+MY+KC + +L +F L E N+F +N++I G +
Sbjct: 265 IHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLR-EKNLFCWNSVIEGLAVHG 323
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIG 172
+A + L F+ M + + P+ TF ++ C + E K+ + + V
Sbjct: 324 YAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHY 383
Query: 173 SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEFHKALEV 222
+V+ K +EEAL++ + L + V+W A+++G + H+ LE+
Sbjct: 384 GCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG----CKLHRNLEI 430
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 185/471 (39%), Positives = 287/471 (60%), Gaps = 9/471 (1%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + K G LD++ + L+N Y+K F+ +A K+F+E+P R+ + + ++ GYA+
Sbjct: 58 KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +A+E+F R+ +E + ++FT VL A M G +H V+K+G S V V
Sbjct: 118 VRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVS 176
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NAL+D+Y K + ++E+F ++ +WN+++ H Q G+ + LRLF ML Q
Sbjct: 177 NALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQ 236
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
VT+S+ L AC+ LAAL G QIH V K D+ + NAL+DMY KCG
Sbjct: 237 ATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK--------DIVVTNALIDMYAKCG 288
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S++DA++VF M+K+D SWN MI GY M G G+EAL +F M E ++KPD++TFVGVLS
Sbjct: 289 SIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLS 348
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+++G L QG+ + M +G+ P IEHYTC++ +LGR G L++A +L +P + +
Sbjct: 349 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSV 408
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+VWR LL A +H + +L I+AQRV ++EP +VL+SN+Y +++ V +R M
Sbjct: 409 MVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNM 468
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ V+K PG SWIE + +H+F D SHPE + I L L + ++ G
Sbjct: 469 KRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAG 519
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 173/319 (54%), Gaps = 2/319 (0%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+LQ C + +G+ +H +L+ G + L+NMY K + A +F+ + E
Sbjct: 44 ALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP-ER 102
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++ +I G+ + + ++ F + + VLP+++TF +++ C + + +IH
Sbjct: 103 NTISFVTLIQGYAESVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGLNLGNQIH 161
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K+GL DV++ +AL++ Y KC ME ++++F E P R+ V WN ++ G+ Q+G+
Sbjct: 162 CHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGE 221
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KAL +F M + + + T + L A + + G +H + VK +D + V NALI
Sbjct: 222 KALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALI 281
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A +F++M ++D SWN++++ + G LR+FD+M +PD +
Sbjct: 282 DMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKL 341
Query: 338 TFSTVLPACSHLAALMHGR 356
TF VL AC++ L G+
Sbjct: 342 TFVGVLSACANAGLLDQGQ 360
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 143/287 (49%), Gaps = 6/287 (2%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+ + FT A+ LQ CA L G +IH ++++ G+ +L+++Y+KC +M
Sbjct: 133 EVLPNQFTFASV---LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 189
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ ++ +F S N T+N +I G K L F +M + V + T+ ++
Sbjct: 190 ENSMELFAE-SPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 248
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + A+ +IH L K D D+ + +AL++ Y KC +++A VF+ + +D V W
Sbjct: 249 CASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSW 308
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVV 262
NAM++GY+ G +AL +F +M + + + T GVLSA G G+ ++
Sbjct: 309 NAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQ 368
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIM 308
G + + ++ + G+G + +A+++ E+ + + W +++
Sbjct: 369 DHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 298/485 (61%), Gaps = 8/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C AV+E K HG + ++ L+ DV + + L+N Y KC F+E A +VF+ + R
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Y + +AL++F M EG S FT++ VLSA + + +H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ VK D + V AL+D+Y K + +A+++FE M++K +W+S++ + Q N++
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ R + + T S+V+ ACS+LAAL+ G+Q+H I +G N V
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN--------V 290
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ ++ +DMY KCGS+R++ ++F+++ +K++ WN +I G+ + KE + +F M +
Sbjct: 291 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 350
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ P+EVTF +LS C H+G + +GR F LM + YG+ P + HY+C++D+LGRAG L+E
Sbjct: 351 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 410
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AYEL ++P + +W +LLA+ R++ N +LAE+AA+++F+LEP + GN+VL+SNIY A
Sbjct: 411 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 470
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
++EE+ R +R +V+K G SWI++KD +HTF + HP + I + L +L +
Sbjct: 471 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 530
Query: 620 LREHG 624
R+ G
Sbjct: 531 FRKFG 535
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 174/319 (54%), Gaps = 1/319 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA + + + H ++R + + LIN YSKC ++ A VF+ + E +
Sbjct: 60 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LERS 118
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI + N + LD F MR G ++T ++ C LE KK+H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K +DL++Y+G+AL++ Y KC +++A++VFE + + V W++MV GY Q + +
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL ++RR + + ++FT++ V+ A + G+ +H ++ K G+ S V V ++ +D
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + E+ IF ++EK++ WN+I++ + + LF++M G P+ VT
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 358
Query: 339 FSTVLPACSHLAALMHGRQ 357
FS++L C H + GR+
Sbjct: 359 FSSLLSVCGHTGLVEEGRR 377
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 10/308 (3%)
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+R V +L G + HG ++++ + V ++N LI+ Y K V A ++F
Sbjct: 52 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 111
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M E+ + SWN+++ ++ + L +F M + GF+ T S+VL AC +
Sbjct: 112 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 171
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+++H V +C D+ ++++ AL+D+Y KCG ++DA VF M K +W
Sbjct: 172 ECKKLHCLSV-------KTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 223
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+ M+ GY + +EAL ++ L+ ++ T V+ ACS+ L +G++ ++
Sbjct: 224 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI-C 282
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G + + +DM + G L E+Y + + E N +W T+++ H
Sbjct: 283 KSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHARPKEVM 341
Query: 534 IAAQRVFQ 541
I +++ Q
Sbjct: 342 ILFEKMQQ 349
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 211/589 (35%), Positives = 330/589 (56%), Gaps = 22/589 (3%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+ L +G+E+H ++LRTG+ID +++++ L+NMY+KC + A VF L C + ++N
Sbjct: 387 EDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFR-LLCARDRVSWN 445
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+IS N F + + MRQ + P + + C + + +++H K
Sbjct: 446 TIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKW 505
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA----MVNGYAQIGEFHKA 219
GLDLD + +ALV Y C E+ ++F + D+V WN+ MV+ +A E +
Sbjct: 506 GLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAE---S 562
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+EVF M + G+ ++ T +LSAL + + G+ VH +V+K G V NAL+
Sbjct: 563 VEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSC 622
Query: 280 YGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + ++F M +D SWNS+++ + G+ T+ M+ + D T
Sbjct: 623 YAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCT 682
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS VL AC+ +AAL G ++H + + + L DV + +AL+DMY+KCG + A
Sbjct: 683 FSIVLNACASVAALERGMEMHAFGIRSQLES--------DVVVESALLDMYSKCGRIDYA 734
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF MS+K+ SWN MI GY G G++AL++F M PD VTFV VLSACSH+
Sbjct: 735 SKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHA 794
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G ++ +ME +G++P IEHY+CVID+LGRAG+L + E MP + N ++WRT
Sbjct: 795 GLVDRGLDYFEMMED-HGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRT 853
Query: 519 LLAASRLHGN---TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
+L A R + DL + A++ + +LEP + NYVL SN Y A G++E+ R M
Sbjct: 854 VLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGG 913
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K G SW+ L DG+HTFI+ DRSHP K IY +L+ L +++ G
Sbjct: 914 AAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKNAG 962
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 203/409 (49%), Gaps = 22/409 (5%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
I+ L CA L GQ++H ++ G+ +D+ +S +L+ MY C + +FN+++
Sbjct: 480 ISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVS-NALVKMYGDCGARSESWEIFNSMA 538
Query: 95 CEPNVFTYNAMISGFYSNDF-AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E ++ ++N+++ S+ + ++ F++M + G+ P+K TF L+ ++VLE+
Sbjct: 539 -EHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSP-LSVLEL 596
Query: 154 -KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYA 211
K++H +V K G D + +AL++ Y K M+ ++F + RD V WN+M++GY
Sbjct: 597 GKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYI 656
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G + ++ M + T + VL+A + + G +H ++ +S V
Sbjct: 657 YNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVV 716
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +AL+DMY K + A ++F M +K+ FSWNS+++ + + G + L +F+ M G
Sbjct: 717 VESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNG 776
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD VTF +VL ACSH + G + +G+ + + + ++D+ +
Sbjct: 777 ACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGI--------LPHIEHYSCVIDLLGR 828
Query: 392 CGSMRDAQMVFTKMS-KKDVASWNIMILG--YGMDGQ----GKEALDMF 433
G + Q +M K + W +++ DG GKEA M
Sbjct: 829 AGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRML 877
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 225/493 (45%), Gaps = 43/493 (8%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+ +H +++ G+ L+N+Y+K ++ A VF+ + E N ++ ++SG+
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGM-LERNAVSWTCLVSGYVL 134
Query: 112 NDFAFKGLDFFNHMRQLG---VLPDKYTFPCLIKCCCDVMAVLE--VKKIHGLVFKLGLD 166
+ + F M G P +TF +++ C D L ++HGLV K
Sbjct: 135 SGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYA 194
Query: 167 LDVYIGSALVNTYLKCQ--FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ + +AL++ Y C +A +VF+ P+RD++ WNA+++ YA+ G +F
Sbjct: 195 SNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254
Query: 225 RM----------SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
M E + S T T + S G V V+K G S + V +
Sbjct: 255 AMLHDDSAIELRPNEHTFGSLITATSLSSC--SSGVLDQ---VFARVLKSGSSSDLYVGS 309
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGF 332
AL+ + + + EA +IF ++E++ + N ++ V + C + + R F
Sbjct: 310 ALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTR---DSF 366
Query: 333 QPDLVTFSTVLPACSHLA----ALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMD 387
+ TF +L A + + LM GR++HG+I+ GL ID + ++N L++
Sbjct: 367 VVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGL--------IDLKIALSNGLVN 418
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG++ A VF + +D SWN +I +G + A+ + M + + P
Sbjct: 419 MYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFA 478
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+ LS+C+ L+ G++ + ++G+ ++ M G G +E++E+ +M
Sbjct: 479 AISGLSSCASLRLLTAGQQ-VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSM 537
Query: 508 PNEANPVVWRTLL 520
E + V W +++
Sbjct: 538 A-EHDIVSWNSIM 549
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 202/577 (35%), Positives = 313/577 (54%), Gaps = 27/577 (4%)
Query: 58 MLRTGIIDSPLSITSLINM--YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
M+ TG++ P + + LI S+ + Y + + + PN F++N I GF ++
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIE-NPNAFSWNVTIRGFSESENP 59
Query: 116 FKGLDFFNHMRQLGVL---PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ + M + G PD +T+P L K C D+ I G VFKL L+L ++
Sbjct: 60 KDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVH 119
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+A ++ + C ME A KVF+E P+RD+V WN ++NGY +IGE KA+EV++ M EG+
Sbjct: 120 NASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVK 179
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ G++S+ M+G G+ + V G +P+ NAL+DM+ K + EA I
Sbjct: 180 PDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRI 239
Query: 293 FEM-------------MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
F+ MEEKD+ WN+++ Q L LF M ++ PD +T
Sbjct: 240 FDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITM 299
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
L ACS L AL G IH YI + L+ N V + +L+DMY KCG++ +A
Sbjct: 300 IHCLSACSQLGALDVGIWIHRYIEKHSLSLN--------VALGTSLVDMYAKCGNISEAL 351
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF + ++ ++ +I G + G A+ F+ M +A + PDE+TF+G+LSAC H G
Sbjct: 352 CVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG 411
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ GR++ M+SR+ + P ++HY+ ++D+LGRAG L EA +L +MP EA+ VW L
Sbjct: 412 MIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGAL 471
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L R+HGN L E AA+++ +L+P G YVL+ +Y +E+ R M ++ V
Sbjct: 472 LFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 531
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
K PGCS IE+ + FI D+S PE++ IY LH L
Sbjct: 532 KIPGCSSIEVNGIVSEFIVRDKSRPESEKIYDCLHCL 568
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 135/290 (46%), Gaps = 16/290 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T I + CA +L +G+E + Y+ G+ + PL+ +L++M+SKC + A +F+N
Sbjct: 184 TMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLA-NALMDMFSKCGDIHEARRIFDN 242
Query: 93 LSC------------EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
L E +V +NAMI G + L F M+ PD+ T
Sbjct: 243 LEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHC 302
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ C + A+ IH + K L L+V +G++LV+ Y KC + EAL VF + R+
Sbjct: 303 LSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNS 362
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHG 259
+ + A++ G A G+ A+ F M GI T G+LSA G + GR
Sbjct: 363 LTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ 422
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ + + + + ++D+ G+ + EA ++ E M E D W +++
Sbjct: 423 MKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALL 472
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 328/580 (56%), Gaps = 12/580 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
L G++IH + + G + SLI+MYS+ A +F+++ ++ ++NAMI
Sbjct: 230 TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
SG N A + LD + MR G+ + T ++ C + + IH V K GL+
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLE 348
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D+++ +AL+N Y K +E+A K F+++ + DVV WN+++ Y Q + A F +M
Sbjct: 349 FDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM 408
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKC 285
G T+ + S + KN R VHG +++ G+ V + NA++DMY K
Sbjct: 409 QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL 468
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLP 344
+ A ++FE++ KD+ SWN+++T + Q G + ++ M P+ T+ ++LP
Sbjct: 469 LDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
A +H+ AL G +IHG ++ L DVF+ L+D+Y KCG + DA +F +
Sbjct: 529 AYAHVGALQQGMKIHGRVIKTNLHL--------DVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ ++ +WN +I +G+ G ++ L +F M + +KPD VTFV +LSACSHSGF+ +G
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ LM+ YG+ P+++HY C++D+LGRAG L AY+ MP + + +W LL A R
Sbjct: 641 KWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+HGN +L + A+ R+F+++ + G YVL+SNIY GK+E V +R R++ ++K PG
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S IE+ + F + ++SHP+ K IY EL LTA+++ G
Sbjct: 760 STIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 258/484 (53%), Gaps = 25/484 (5%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+ ++ G + S T L+N+Y+ + + F+ + + +V+ +N+MIS + N
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP-QKDVYAWNSMISAYVHNG 196
Query: 114 FAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ + F + + + PD YTFP ++K C +++ +KIH FKLG +V++
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKIHCWAFKLGFQWNVFVA 253
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++L++ Y + F A +F+++P RD+ WNAM++G Q G +AL+V M EGI
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
M+ TV +L +G ++H V+K G + + V NALI+MY K + +A +
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ M D+ SWNSI+ +EQ + F +M GFQPDL+T ++ +
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDC 433
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
+ R +HG+I+ G ++DV + NA++DMY K G + A VF + KDV S
Sbjct: 434 KNSRSVHGFIMRRGWL-------MEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVIS 486
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
WN +I GY +G EA++++ M E K + P++ T+V +L A +H G L QG M
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG------M 540
Query: 472 ESRYGVVPTIEHY-----TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ V+ T H TC+ID+ G+ G+L +A L +P E++ V W +++ +H
Sbjct: 541 KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIH 599
Query: 527 GNTD 530
G+ +
Sbjct: 600 GHAE 603
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 172/333 (51%), Gaps = 15/333 (4%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
T ++ L +C ++ IH Y+++ G+ +LINMY+K ++ A F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V ++N++I+ + ND FF M+ G PD T L
Sbjct: 376 QMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434
Query: 152 EVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ +HG + + G L DV IG+A+V+ Y K ++ A KVFE +P++DV+ WN ++ GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494
Query: 211 AQIGEFHKALEVFRRMSK-------EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AQ G +A+EV++ M + +G W+S +L A +G + G +HG V+K
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVS------ILPAYAHVGALQQGMKIHGRVIK 548
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
V V LID+YGK + +A+ +F + ++ +WN+I++ H G+ + TL+L
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
F ML G +PD VTF ++L ACSH + G+
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 180/375 (48%), Gaps = 13/375 (3%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H L+ G ++I + LVN Y + + F+++P +DV WN+M++ Y
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195
Query: 214 GEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G FH+A+ F ++ I +T VL A G +GR +H K+G+ V V
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFV 252
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+LI MY + G A +F+ M +D+ SWN++++ Q GN L + D M G
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + VT ++LP C L + IH Y++ +GL D+F++NAL++MY K
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF--------DLFVSNALINMYAKF 364
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ DA+ F +M DV SWN +I Y + A F M +PD +T V +
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S + S R + R ++ + V+DM + G L+ A+++ +P + +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVK-D 483
Query: 513 PVVWRTLLAASRLHG 527
+ W TL+ +G
Sbjct: 484 VISWNTLITGYAQNG 498
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ L AH LQ+G +IH +++T + T LI++Y KC ++ A+ +F
Sbjct: 521 GTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E +V T+NA+IS + A K L F M GV PD TF L+ C V E
Sbjct: 581 VPQESSV-TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 639
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM----- 206
K L+ + G+ + +V+ + ++E A +++PL+ D +W A+
Sbjct: 640 GKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699
Query: 207 VNGYAQIGEF 216
++G ++G+F
Sbjct: 700 IHGNIELGKF 709
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 321/552 (58%), Gaps = 11/552 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C +L G++IH +++ D+ + +T L++MY+KC ++K + VF +++
Sbjct: 160 ALKACTEVQDLDNGKKIHCQIVKVPSFDNVV-LTGLLDMYAKCGEIKSSYKVFEDITLR- 217
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV + +MI+G+ ND +GL FN MR+ VL ++YT+ L+ C + A+ + K H
Sbjct: 218 NVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFH 277
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + K G++L + ++L++ Y+KC + A +VF E D+V+W AM+ GY G +
Sbjct: 278 GCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 337
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+AL +F++MS GI + T+ VLS ++G + GR +HG+ +K+G +D+ V NAL
Sbjct: 338 EALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTNVA--NAL 395
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY K +A +FEM EKDI +WNSI++ Q G+ L LF RM + P+
Sbjct: 396 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNG 455
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT +++ AC+ L +L G +H Y V G + S V + AL+D Y KCG
Sbjct: 456 VTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSS------VHVGTALLDFYAKCGDAE 509
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+++F + +K+ +W+ MI GYG G K +L++F M + + KP+E TF VLSACS
Sbjct: 510 SARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACS 569
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G +++G+++ M Y P+ +HYTC++DML RAG+L +A ++ MP + + +
Sbjct: 570 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 629
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L +H DL EI +++ L P YVL+SN+Y + G++ + ++R+ M+Q+
Sbjct: 630 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQR 689
Query: 577 NVRKNPGCSWIE 588
+ K G S +E
Sbjct: 690 GLSKIAGHSIME 701
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 246/525 (46%), Gaps = 25/525 (4%)
Query: 14 CFNFSTSSGNQTFNHP-------FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
CF F+T Q N P A L + TN+ ++ H + G++
Sbjct: 31 CFTFTTI---QELNLPEDNDESSLNYAASRPCFLLLSKCTNIDSLRQAHGVLTGNGLMGD 87
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
T L+++Y K A VF+ + EP+ + + ++ + N+ +F+ + F++ +
Sbjct: 88 ISIATKLVSLYGSFGYTKDARLVFDQIP-EPDFYLWKVILRCYCLNNESFEVIKFYDLLM 146
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ G D F +K C +V + KKIH + K+ D + + L++ Y KC ++
Sbjct: 147 KHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVLTGLLDMYAKCGEIK 205
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+ KVFE++ LR+VV W +M+ GY + + + L +F RM + + + +T ++ A
Sbjct: 206 SSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACT 265
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ G+ HG ++K G + ++ +L+DMY K + A +F D+ W +
Sbjct: 266 KLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 325
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + G+ + L LF +M G +P+ VT ++VL C + L GR IHG + G
Sbjct: 326 MIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVG 385
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
I D + NAL+ MY KC RDA+ VF S+KD+ +WN +I G+ +G
Sbjct: 386 ---------IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 436
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP--TIEHY 484
EAL +F M + P+ VT + SAC+ G L+ G L + G + ++
Sbjct: 437 HEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSS-LHAYSVKLGFLASSSVHVG 495
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
T ++D + G E+ L E N + W ++ G+T
Sbjct: 496 TALLDFYAKCGDA-ESARLIFDTIEEKNTITWSAMIGGYGKQGDT 539
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 314/571 (54%), Gaps = 44/571 (7%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+ +P+ T + +IS ++ + + + ++ +++ G+ PD F K C
Sbjct: 120 LFDNIP-QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 178
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
L VK++H + G+ DV++G+AL++ Y KC+ +E A +VF++L +RDVV W ++ +
Sbjct: 179 DALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSS 238
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + G K ++VFR M G+ + TV+ +L A + K+G+ +HG V+ G
Sbjct: 239 CYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV 298
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH----------------- 311
+ V +AL+ +Y K V EA +F++M +D+ SWN ++T +
Sbjct: 299 NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 358
Query: 312 ------------------EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ G + + +F +M GF+P+ +T S++LPACS L
Sbjct: 359 RDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLR 418
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G++IH Y+ + + D+ AL+ MY KCG + ++ VF M +KDV +W
Sbjct: 419 MGKEIHCYVFRHW--------KVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 470
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI+ M G GKEAL +F M ++++P+ VTF GVLS CSHS + +G + M
Sbjct: 471 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 530
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ V P HY+CV+D+ RAG+LNEAY+ MP E W LLAA R++ N +LA+
Sbjct: 531 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 590
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
I+A+++F++EP + GNYV + NI V + E +R M+++ + K PGCSW+++ + +
Sbjct: 591 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKV 650
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
HTF+ D+S+ E+ IY L L +++ G
Sbjct: 651 HTFVVGDKSNIESDKIYNFLDELVEKMKMAG 681
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 197/418 (47%), Gaps = 44/418 (10%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A+ + CA + + +E+H R G++ +LI+ Y KC ++ A VF++L
Sbjct: 168 LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV 227
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V ++ ++ S + F KG+D F M GV P+ T ++ C ++ + K+
Sbjct: 228 R-DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE 286
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + G+ +++++ SALV+ Y KC + EA VF+ +P RDVV WN ++ Y + E
Sbjct: 287 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 346
Query: 216 FHK-----------------------------------ALEVFRRMSKEGIWMSRFTVTG 240
+ K A+E+FR+M K G + T++
Sbjct: 347 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 406
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+L A + G+ +H V + + AL+ MY K + + +F+MM KD
Sbjct: 407 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 466
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ +WN+++ + GN L LFD+ML + QP+ VTF+ VL CSH + G QI
Sbjct: 467 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 526
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
+ + L + D + ++D+Y++ G + +A M + AS W ++
Sbjct: 527 SMGRDHLVE-------PDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 577
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 47/322 (14%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+P T+++ + + CA +L+ G+EIH + +R G++ + ++L+++Y+KC ++ A
Sbjct: 264 NPMTVSSILPA---CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREAR 320
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD- 146
VF +L +V ++N +++ ++ N KG F M + GV D+ T+ +I C +
Sbjct: 321 MVF-DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 379
Query: 147 ------------------------VMAVLEV----------KKIHGLVFKLGLDLDVYIG 172
+ ++L K+IH VF+ D+
Sbjct: 380 GRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST 439
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+ Y KC + + VF+ + +DVV WN M+ A G +AL +F +M +
Sbjct: 440 TALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 499
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV-PVMN---ALIDMYGKGKCVGE 288
+ T TGVLS + G + MG D V P N ++D+Y + + E
Sbjct: 500 PNSVTFTGVLSGCSHSRLVEEGVQIFN---SMGRDHLVEPDANHYSCVVDIYSRAGRLNE 556
Query: 289 ALEIFEMME-EKDIFSWNSIMT 309
A + + M E +W +++
Sbjct: 557 AYKFIQGMPMEPTASAWGALLA 578
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ + + D + +++++ G + ++++ + G +PD+ F AC+
Sbjct: 116 RARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 175
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ +++H C + DVF+ NAL+ Y KC + A+ VF +
Sbjct: 176 VSGDALRVKEVHD--------DATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV 227
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+DV SW + Y G ++ +D+F M + +KP+ +T +L AC+ L G+E
Sbjct: 228 RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE- 286
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ R+G+V + + ++ + + + EA + MP+ + V W +L A
Sbjct: 287 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA 340
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 195/607 (32%), Positives = 322/607 (53%), Gaps = 19/607 (3%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
+T+ F + F +A C +N + +H++ + G + ++L+++Y
Sbjct: 104 NTNLSPDNFTYAFAVAAC----------SNDKHLMLLHAHSIIDGYGSNVFVGSALVDLY 153
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
K ++ YA VF+ + E + +N MI+G N + F M GV D T
Sbjct: 154 CKFSRVVYARKVFDGMP-ERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTV 212
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
++ ++ + I L K+G Y+ + L++ Y KC + A +F +
Sbjct: 213 TAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINR 272
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
D++ +NAM++G+ G ++++FR + G +S T+ G++ G +
Sbjct: 273 PDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSI 332
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
HG VK G V A +Y K + A +F+ EK + +WN++++ + Q G+
Sbjct: 333 HGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGST 392
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ + LF M+ F P+ VT +T+L AC+ L +L G+ +H I L N
Sbjct: 393 ETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPN------- 445
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
++++ AL+DMY KCG++ +A +F MS+K+ +WN MI GYG+ G G EAL +++ M
Sbjct: 446 -IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEML 504
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
P VTF+ VL ACSH+G + +G E M ++Y + P IEHY C++D+LGR+GQL
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQL 564
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
+A E MP E P VW TLL A +H +TD+A +A++R+F+L+PG G YVL+SNIY
Sbjct: 565 EKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIY 624
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ + IR ++++ + K+PGC+ IE+ H F+S DRSH A IYA+L LT
Sbjct: 625 SVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLT 684
Query: 618 ARLREHG 624
++RE G
Sbjct: 685 GKMREMG 691
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 222/433 (51%), Gaps = 14/433 (3%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVK 154
+P++F +N ++ GF ND + + H+R+ + PD +T+ + C + ++
Sbjct: 72 KPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM--- 128
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+H G +V++GSALV+ Y K + A KVF+ +P RD VLWN M+NG +
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNC 188
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
F ++++FR M +G+ + TVT VL A + K G + + +K+G+ V+
Sbjct: 189 CFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLT 248
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
LI +Y K V A +F + D+ ++N++++ G + +++LF +L +G +
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
T ++P S L IHG+ V +G+ N + ++ A +Y K
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT--------VSTAFTAIYNKLNE 360
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F + +K V +WN MI GY +G + A+ +F M + + P+ VT +LSA
Sbjct: 361 IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA 420
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+ G LS G+ L++S + P I T ++DM + G ++EA++L +M +E N V
Sbjct: 421 CAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFDSM-SEKNTV 478
Query: 515 VWRTLLAASRLHG 527
W T++ LHG
Sbjct: 479 TWNTMIFGYGLHG 491
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 336/640 (52%), Gaps = 53/640 (8%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
NQT P+ T L + +L G+ +H+ +++ + S +N+YSKC +
Sbjct: 2 NQT---PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGR 58
Query: 83 MKYALFVFNNLSCEPNVFTYN-------------------------------AMISGFYS 111
+ YA F + EPNVF+YN +ISG+
Sbjct: 59 LSYARAAFYSTE-EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD 117
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
F + F MR+LG D +T LI CCD + + +K++H G D +
Sbjct: 118 ARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSV 175
Query: 172 GSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+A V Y K + EA+ VF + LRD V WN+M+ Y Q E KAL +++ M +G
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVG-- 287
+ FT+ VL+AL + GR HG ++K G+ V + LID Y K G C G
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 288 EALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
++ ++F+ + D+ WN++++ ++E+ + ++ F +M G +PD +F V
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELS--EEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
ACS+L++ +QIHG + + + N + +NNAL+ +Y K G+++DA+ VF +
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSN-------RISVNNALISLYYKSGNLQDARWVFDR 406
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M + + S+N MI GY G G EAL ++ M ++ + P+++TFV VLSAC+H G + +G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+E+ M+ + + P EHY+C+ID+LGRAG+L EA AMP + V W LL A R
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACR 526
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
H N LAE AA + ++P YV+++N+Y K+EE+ +R +MR + +RK PGC
Sbjct: 527 KHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGC 586
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
SWIE+K H F++ D SHP + + L + ++++ G
Sbjct: 587 SWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVG 626
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 346/630 (54%), Gaps = 23/630 (3%)
Query: 1 MLSKISRINPFSS---CFN-FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHS 56
M+S +RI F + CFN F ++S Q+ ++ F ++ C NL G+++H
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFP-----PVIRACG---NLDDGRKVHC 163
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF 116
+L+ G S I+ YS+ + A +F+N+ ++ T+NAMISGFY N
Sbjct: 164 LVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGKVA 222
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ L+ F+ MR V D T L+ C + ++ IH KLGL+ D+++ +AL+
Sbjct: 223 EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y K + A +F ++ +RD+V WN+++ + Q + AL V+ +M G+
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLL 342
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ + S +G F + R +HG V + + + + NA+IDMY K + A ++FE
Sbjct: 343 TLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEG 402
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMH 354
+ KD+ SWNS++T + Q G + + ++ M +G P+ T+ ++L A S L AL
Sbjct: 403 LPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G + HG ++ N L D+F++ L+DMY KCG + DA +F ++ + SWN
Sbjct: 463 GMKAHGQLIKNFLYF--------DIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWN 514
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+I +G+ G G +A+ +F M +KPD +TFV +LSACSHSG + +G+ LM+
Sbjct: 515 AIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQET 574
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
YG+ P+++HY C++D+ GRAG L +A+ MP + VW LL A R+H N +L
Sbjct: 575 YGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRT 634
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
+ + ++E + G YVL+SNIY G +E V ++R R + ++K PG S IE+ +
Sbjct: 635 VSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKID 694
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F + +++HP+ + IY+EL +LTA+++ G
Sbjct: 695 VFYTGNQTHPKCEEIYSELRNLTAKMKSIG 724
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 279/532 (52%), Gaps = 26/532 (4%)
Query: 4 KISRINP-FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG 62
++S P F +C +S ++ + + I ++ + T + +++H+ ++ +G
Sbjct: 11 RVSLFKPSFQACSLYSATAAPKYLDGVENEKREIDFNRIFLYCTKVHLAKQLHALLVVSG 70
Query: 63 IIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFF 122
S LIN Y+ + +A F+ + + +V+T+N+MIS + +D F
Sbjct: 71 KTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK-DVYTWNSMISAYARIGHFHAAVDCF 129
Query: 123 NHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
N L D YTFP +I+ C ++ + +K+H LV KLG + DVYI ++ ++ Y +
Sbjct: 130 NEFLSTSFLQSDHYTFPPVIRACGNLD---DGRKVHCLVLKLGFECDVYIAASFIHFYSR 186
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
F+ A +F+ + +RD+ WNAM++G+ G+ +ALEVF M + + M T++ +
Sbjct: 187 FGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSL 246
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L + + +G ++H +K+G + + V NALI+MY K + A IF M+ +DI
Sbjct: 247 LPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDI 306
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SWNS++ EQ L ++++M S G PDL+T ++ + L + R IHG+
Sbjct: 307 VSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGF 366
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ C + D+ + NA++DMY K G + A+ VF + KDV SWN +I GY
Sbjct: 367 V-------TRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYS 419
Query: 422 MDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+G EA+D++S M + P++ T+V +L+A S G L QG M++ ++
Sbjct: 420 QNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQG------MKAHGQLIKN 473
Query: 481 IEHY-----TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ TC++DM G+ G+L +A L +P++++ V W +++ LHG
Sbjct: 474 FLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS-VSWNAIISCHGLHG 524
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 324/586 (55%), Gaps = 11/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPL-SITSLINMYSKCCQMKYALFVFNNLSCEP 97
++ CA L++G+ HS +R G++ S + + SL+ Y+K + A VF+ +
Sbjct: 114 VKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVR- 172
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
++ T+N+M+ G+ SN LD F M + L V D + CC A+++ +++
Sbjct: 173 DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREV 232
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V + GL+ DV +G++L++ Y KC + A +F +P R VV WN M+ GYA G
Sbjct: 233 HAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCP 292
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A + F +M EG + T +L+A GR VHG V + + V + AL
Sbjct: 293 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETAL 352
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++MY K V + IF M K + SWN+++ + ++ + LF +L+ PD
Sbjct: 353 LEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDY 412
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S V+PA L L RQ+H YIV +N + NA+M MY +CG +
Sbjct: 413 FTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGEN--------TLVTNAVMHMYARCGDVV 464
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
++ +F KM+ KDV SWN +I+GY + GQGK AL+MFS M L+P+E TFV VL+ACS
Sbjct: 465 SSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACS 524
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
SG +G LM+ YG++P IEHY C+ D+LGRAG L E + ++P +W
Sbjct: 525 VSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIW 584
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+LL ASR + D+AE AA+R+F+LE + G YV++S++Y G++E+V IR +M ++
Sbjct: 585 GSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEK 644
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R+ S +EL +F++ D +HP++K+I+ L+ ++ E
Sbjct: 645 GLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGE 690
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 229/468 (48%), Gaps = 19/468 (4%)
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
S+ SL+ ++ +M AL + P+ F +N +I GF L + M
Sbjct: 45 SLKSLVLSHAAAGRMHDALAAVRS---SPDAFLHNVVIRGFADAGLPEAALAAYRAMLAA 101
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEE 187
G PD++TFP ++KCC + A+ E + H +LGL +VY G++L+ Y K + +
Sbjct: 102 GARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVAD 161
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR--FTVTGVLSAL 245
A +VF+ +P+RD+V WN+MV+GY G AL+ FR M EG+ + + L+A
Sbjct: 162 AERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM-HEGLQVQHDGVGIIAALAAC 220
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ GR VH V++ G + V V +L+DMY K + A +F M + + +WN
Sbjct: 221 CLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWN 280
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++ + G + F +M + G Q ++VT +L AC+ + ++GR +HGY+ +
Sbjct: 281 CMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRS 340
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
+ V + AL++MY+K G ++ ++ +F +M+ K + SWN MI Y
Sbjct: 341 QF--------LPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEM 392
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHY 484
EA+ +F + L PD T V+ A G L Q R+ ++ YG + +
Sbjct: 393 YNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTN- 451
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
V+ M R G + + ++ M + + + W T++ +HG +A
Sbjct: 452 -AVMHMYARCGDVVSSRKIFDKMAGK-DVISWNTIIMGYAIHGQGKIA 497
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 178/362 (49%), Gaps = 8/362 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA+L C + L +G+E+H+Y++R G+ TSL++MY KC + A +F +
Sbjct: 214 IAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPS 273
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+N MI G+ N + D F M+ G + T L+ C + L +
Sbjct: 274 R-TVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 332
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG V + V + +AL+ Y K ++ + +F ++ + +V WN M+ Y
Sbjct: 333 VHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEM 392
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+++A+ +F + + ++ FT++ V+ A +++G + R +H +V++ Y V NA
Sbjct: 393 YNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNA 452
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ MY + V + +IF+ M KD+ SWN+I+ + G L +F M S G QP+
Sbjct: 453 VMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPN 512
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +VL ACS + G G+I N + ++ I + + D+ + G +
Sbjct: 513 ESTFVSVLTACS-----VSGMADEGWIQFNLMQRDYGI--IPQIEHYGCMTDLLGRAGDL 565
Query: 396 RD 397
R+
Sbjct: 566 RE 567
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 135/284 (47%), Gaps = 3/284 (1%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H + T I L CA + G+ +H Y+ R+ + + T+L+ MYSK ++K +
Sbjct: 307 HQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSE 366
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F ++ + ++N MI+ + + + + F + + PD +T ++ +
Sbjct: 367 TIFGQMT-NKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLL 425
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + +++H + +L + + +A+++ Y +C + + K+F+++ +DV+ WN ++
Sbjct: 426 GLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTII 485
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGY 266
GYA G+ ALE+F M G+ + T VL+A + G G + ++ + G
Sbjct: 486 MGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGI 545
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMT 309
+ + D+ G+ + E L+ E + F W S++T
Sbjct: 546 IPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLT 589
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 201/658 (30%), Positives = 337/658 (51%), Gaps = 74/658 (11%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVF 90
L++ A+L A +T +H +LRT P + + L+ Y K + A VF
Sbjct: 5 LSSQYAALLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVF 64
Query: 91 NNLSCEPNVFTYNAMIS-------------------------------GFYSNDFAFKGL 119
+ + PN+FTYNA++S GF + +
Sbjct: 65 DA-TPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAV 123
Query: 120 DFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
++ + + G V P + T ++ + ++ H + +LG ++ ++GS LV
Sbjct: 124 RLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVG 183
Query: 178 TY-------------------------------LKCQFMEEALKVFEELPLRDVVLWNAM 206
Y L+C+ +EEA ++FE + RD + W M
Sbjct: 184 MYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTM 243
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
V G+ Q G +AL FRRM +GI + ++T +L+A + + G+ +H +++ Y
Sbjct: 244 VTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHY 303
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
D V V +AL+DMY K + + A F M K+I SW +++ + Q G + +R+F
Sbjct: 304 DDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSE 363
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M G PD T +V+ +C++LA+L G Q H +V+GL + + ++NAL+
Sbjct: 364 MQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL--------MHYITVSNALV 415
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
+Y KCGS+ DA +F +M D SW ++ GY G+ KE +D+F M +KPD V
Sbjct: 416 TLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGV 475
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+GVLSACS +GF+ +G + M+ +G+VP +HYTC+ID+ R+G+L EA E
Sbjct: 476 TFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQ 535
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP + + W TLL+A RL G+ ++ + AA+ + +++P + +YVL+ +++ G + +V
Sbjct: 536 MPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQV 595
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR + V+K PGCSWI+ K+ +H F + D+SHP +K IY +L L +++ E G
Sbjct: 596 AQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEG 653
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 302/521 (57%), Gaps = 10/521 (1%)
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
MI+G+ S + F M + P+ +T ++K C + + + +HGL K G
Sbjct: 64 MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123
Query: 165 LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
LD +Y+ +AL++ Y C M++A VF + L++ V W ++ GY + + L VF
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R+M E + ++ F+ + + A +G G +H V K G++S +PVMN+++DMY +
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
C EA F M ++D+ +WN+++ +E+ N +L +F M S GF P+ TF++++
Sbjct: 244 SCFSEANRYFYEMNQRDLITWNTLIAGYER-SNPTESLYVFSMMESEGFSPNCFTFTSIM 302
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ LA L G+QIHG I+ GL N + ++NAL+DMY+KCG++ D+ VF
Sbjct: 303 AACATLAFLNCGQQIHGRIIRRGLDGN--------LALSNALIDMYSKCGNIADSHQVFG 354
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
MS++D+ SW M++GYG G G+EA+++F M + ++PD V F+ +LSACSH+G + +
Sbjct: 355 GMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDE 414
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + LM Y + P E Y CV+D+LGRAG++ EAYEL +MP + + VW L A
Sbjct: 415 GLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGAC 474
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H +L ++AA R+ L P G YV++SNIY A GK+ E +R M++ +K G
Sbjct: 475 KAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETG 534
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
SW+E+ + +++F+ D + + IY L +L ++E G
Sbjct: 535 RSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESG 575
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 187/382 (48%), Gaps = 11/382 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC-QMKYALFVFNN 92
T + L+ C L G+ +H ++ G+ +L++MY+ CC M A VF
Sbjct: 95 TISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRG 154
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + N ++ +I+G+ D + GL F M V + ++F ++ C + +
Sbjct: 155 IHLK-NEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTF 213
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H V K G + ++ + +++++ Y +C EA + F E+ RD++ WN ++ GY +
Sbjct: 214 GEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYER 273
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
++L VF M EG + FT T +++A + F G+ +HG +++ G D + +
Sbjct: 274 SNP-TESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLAL 332
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NALIDMY K + ++ ++F M +D+ SW ++M + G + + LFD+M+ +G
Sbjct: 333 SNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGI 392
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD V F +L ACSH + G + +V G D + ++D+ +
Sbjct: 393 RPDRVVFMAILSACSHAGLVDEGLRYFKLMV-------GDYNISPDQEIYGCVVDLLGRA 445
Query: 393 GSMRDAQMVFTKMS-KKDVASW 413
G + +A + M K D W
Sbjct: 446 GKVEEAYELIESMPFKPDECVW 467
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 331/598 (55%), Gaps = 33/598 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T + ++Q CA +L+ G++IH ++ ++ + +L+NMYS ++ + +
Sbjct: 260 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 319
Query: 90 FNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F ++ PN +N+MIS + + + +D F M+ GV D+ T ++ C ++
Sbjct: 320 FESV---PNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEEL 376
Query: 148 MA-VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ +L+ K +H V K G+ +D +G+AL++ Y + +E K+F+ + D++ WN M
Sbjct: 377 ASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTM 436
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ A+ +A E+F RM + I + +T+ +L+A + GR +HG V+K
Sbjct: 437 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSI 496
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ P+ AL DMY A ++FE ++D+ SWN+++ E
Sbjct: 497 EINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAE-------------- 542
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
P+ VT VL + +HLA L G+ +H Y+ G + D+ + NA +
Sbjct: 543 -------PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGL------DLSLANAFI 589
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY +CGS++ A+ +F + K+++ SWN MI GYGM+G+G +A+ FS M E +P+ V
Sbjct: 590 TMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGV 649
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TFV VLSACSHSGF+ G + M + V P + HY+C++D+L R G ++EA E +
Sbjct: 650 TFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDS 709
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP E + VWR LL++ R + + A+ +++ +LEP + GNYVL+SN+Y G + EV
Sbjct: 710 MPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEV 769
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR ++++ +RK PG SWI +K+ +H F + DRSHP++ IYA+L L + +RE G
Sbjct: 770 RRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETG 827
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 165/554 (29%), Positives = 261/554 (47%), Gaps = 52/554 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS-PLSITSLINMYSKCCQMKYALFVFNN 92
T +A L C + L+ G+ +H Y LR G+ DS P T+LI Y + M+ +F +
Sbjct: 163 TMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLR-FDMRVLPLLF-D 220
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL-----IKCCCDV 147
L N+ ++NAMISG+Y FK L+ F M L D+ F C+ ++ C ++
Sbjct: 221 LMVVRNIVSWNAMISGYYDVGDYFKALELFVQM-----LVDEVKFDCVTMLVAVQACAEL 275
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
++ K+IH L K D+YI +AL+N Y +E + ++FE +P RD LWN+M+
Sbjct: 276 GSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMI 335
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL--IMMGFFKNGRVVHGIVVKMG 265
+ YA G +A+++F RM EG+ TV +LS + G K G+ +H V+K G
Sbjct: 336 SAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLK-GKSLHAHVIKSG 394
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ NAL+ MY + CV +IF+ M+ DI SWN+++ + LF+
Sbjct: 395 MRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 454
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM + +P+ T ++L AC + L GR IHGY++ + + N + AL
Sbjct: 455 RMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQP--------LRTAL 506
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
DMY CG A+ +F +D+ SWN MI K +P+
Sbjct: 507 ADMYMNCGDEATARDLFEGCPDRDLISWNAMI---------------------XKAEPNS 545
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VT + VLS+ +H L QG+ + R + + + I M R G L A +
Sbjct: 546 VTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIF 605
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GG 561
+P N + W ++A ++G A +A ++ LE G N V ++ A G
Sbjct: 606 KTLPKR-NIISWNAMIAGYGMNGRGSDAMLAFSQM--LEDGFRPNGVTFVSVLSACSHSG 662
Query: 562 KYEEVLDIRHTMRQ 575
E L + H+M Q
Sbjct: 663 FIEMGLQLFHSMVQ 676
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 226/429 (52%), Gaps = 12/429 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA Q +++G+ IH + T ++D T++++ Y KC ++ A VF+ +S + +
Sbjct: 67 LKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS-DRD 125
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +NAM+ G+ + + M + + P+ T L+ C + + +HG
Sbjct: 126 VVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHG 185
Query: 159 LVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ G+ D + ++ +AL+ YL+ L +F+ + +R++V WNAM++GY +G++
Sbjct: 186 YCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDYF 244
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KALE+F +M + + T+ + A +G K G+ +H + +K + + ++NAL+
Sbjct: 245 KALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALL 304
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+MY + + ++FE + +D WNS+++ + G H+ + LF RM S G + D
Sbjct: 305 NMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDER 364
Query: 338 TFSTVLPACSHLAA-LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +L C LA+ L+ G+ +H +++ +G+ + S + NAL+ MYT+ +
Sbjct: 365 TVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS--------LGNALLSMYTELNCVE 416
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
Q +F +M D+ SWN MIL + +A ++F M E+++KP+ T + +L+AC
Sbjct: 417 SVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACE 476
Query: 457 HSGFLSQGR 465
L GR
Sbjct: 477 DVTCLDFGR 485
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 187/353 (52%), Gaps = 14/353 (3%)
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
ND A L + M LGVLP+ T P ++K C AV K IH + L DV +
Sbjct: 40 NDQAI--LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRV 97
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G+A+V+ Y KC F+E+A VF+ + RDVVLWNAMV GY G + +A+ + R M +E +
Sbjct: 98 GTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENL 157
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEAL 290
+ T+ +L A + GR VHG ++ G +DS V ALI Y + L
Sbjct: 158 RPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL 217
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F++M ++I SWN++++ + G++ L LF +ML + D VT + AC+ L
Sbjct: 218 -LFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELG 276
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L G+QIH + + ++D+++ NAL++MY+ GS+ + +F + +D
Sbjct: 277 SLKLGKQIHQLAI--------KFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 328
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH--SGFL 461
WN MI Y G +EA+D+F M +K DE T V +LS C SG L
Sbjct: 329 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLL 381
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 156/329 (47%), Gaps = 10/329 (3%)
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++ ++D WN+++ A + L + +M G+ + T+ VL A +
Sbjct: 19 KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H + V V A++D Y K V +A +F+ M ++D+ WN+++ +
Sbjct: 79 GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ + L M +P+ T +L AC + L GR +HGY + NG+ +
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDS--- 195
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ + AL+ Y + MR ++F M +++ SWN MI GY G +AL++F
Sbjct: 196 ----NPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELF 250
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M ++K D VT + + AC+ G L G++ L ++ V + +++M
Sbjct: 251 VQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQL-AIKFEFVEDLYILNALLNMYSN 309
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAA 522
G L +++L ++PN P +W ++++A
Sbjct: 310 NGSLESSHQLFESVPNRDAP-LWNSMISA 337
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 193/564 (34%), Positives = 312/564 (55%), Gaps = 45/564 (7%)
Query: 98 NVFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N +N+ + F S+ + L+ F + GV+ D + +K C VM + +I
Sbjct: 486 NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEI 545
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG + K G DLDVY+ AL+N Y +C +E+A +VF E+P + +LWN + Q +
Sbjct: 546 HGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKL 605
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIM-MGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
K +E+FR+M + T+ VL A I +GF G+ HG V++ G+D V V +
Sbjct: 606 QKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTS 665
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LIDMY K + A +F+ M+ ++IF+WNS+++ + G + LRL ++M G +PD
Sbjct: 666 LIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 725
Query: 336 LVTF-----------------------------------STVLPACSHLAALMHGRQIHG 360
LVT+ + +L AC+ L+ L G++IH
Sbjct: 726 LVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHC 785
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
+ NG I+DVF+ AL+DMY+K S+++A VF ++ K +ASWN MI+G+
Sbjct: 786 LSIRNGF--------IEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGF 837
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+ G GKEA+ +F+ M + + PD +TF +LSAC +SG + +G ++ M + Y +VP
Sbjct: 838 AIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPR 897
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+EHY C++D+LGRAG L+EA++L MP + + +W LL + R+H N AE AA+ +F
Sbjct: 898 LEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLF 957
Query: 541 QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+LEP + NY+LM N+Y ++E++ +R M VR SWI++ +H F S +
Sbjct: 958 KLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDE 1017
Query: 601 RSHPEAKSIYAELHSLTARLREHG 624
+ HP+A IY EL+ L + +++ G
Sbjct: 1018 KPHPDAGKIYFELYQLVSEMKKLG 1041
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 37/354 (10%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C ++ G EIH +++ G +L+N Y +C ++ A VF+ + P
Sbjct: 529 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP-NP 587
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKI 156
+N I ++ KG++ F M+ + + T +++ + L + K+
Sbjct: 588 EALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKET 647
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG V + G D DVY+G++L++ Y+K + A VF+ + R++ WN++V+GY+ G F
Sbjct: 648 HGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMF 707
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-------FF------------------ 251
AL + +M KEGI T G++S M G FF
Sbjct: 708 EDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCL 767
Query: 252 ----------KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+ G+ +H + ++ G+ V V ALIDMY K + A ++F ++ K +
Sbjct: 768 LRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTL 827
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
SWN ++ G + +F+ M G PD +TF+ +L AC + + G
Sbjct: 828 ASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEG 881
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 37/313 (11%)
Query: 33 ATCIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
AT + LQ + L G+E H Y+LR G TSLI+MY K + A VF+
Sbjct: 625 ATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFD 684
Query: 92 NLS----------------------------------CEPNVFTYNAMISGFYSNDFAFK 117
N+ +P++ T+N MISG+ +
Sbjct: 685 NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKE 744
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L FF M+Q GV+P+ + CL++ C + + + K+IH L + G DV++ +AL++
Sbjct: 745 ALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALID 804
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y K ++ A KVF + + + WN M+ G+A G +A+ VF M K G+ T
Sbjct: 805 MYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAIT 864
Query: 238 VTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T +LSA G G + ++ + ++D+ G+ + EA ++ M
Sbjct: 865 FTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTM 924
Query: 297 EEK-DIFSWNSIM 308
K D W +++
Sbjct: 925 PLKPDATIWGALL 937
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 314/571 (54%), Gaps = 44/571 (7%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+ +P+ T + +IS ++ + + + ++ +++ G+ PD F K C
Sbjct: 34 LFDNIP-QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSG 92
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
L VK++H + G+ DV++G+AL++ Y KC+ +E A +VF++L +RDVV W ++ +
Sbjct: 93 DALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSS 152
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + G K ++VFR M G+ + TV+ +L A + K+G+ +HG V+ G
Sbjct: 153 CYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVV 212
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH----------------- 311
+ V +AL+ +Y K V EA +F++M +D+ SWN ++T +
Sbjct: 213 NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 272
Query: 312 ------------------EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ G + + +F +M GF+P+ +T S++LPACS L
Sbjct: 273 RDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLR 332
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G++IH Y+ + + D+ AL+ MY KCG + ++ VF M +KDV +W
Sbjct: 333 MGKEIHCYVFRHW--------KVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 384
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI+ M G GKEAL +F M ++++P+ VTF GVLS CSHS + +G + M
Sbjct: 385 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 444
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ V P HY+CV+D+ RAG+LNEAY+ MP E W LLAA R++ N +LA+
Sbjct: 445 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 504
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
I+A+++F++EP + GNYV + NI V + E +R M+++ + K PGCSW+++ + +
Sbjct: 505 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKV 564
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
HTF+ D+S+ E+ IY L L +++ G
Sbjct: 565 HTFVVGDKSNIESDKIYNFLDELVEKMKMAG 595
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 197/418 (47%), Gaps = 44/418 (10%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+A+ + CA + + +E+H R G++ +LI+ Y KC ++ A VF++L
Sbjct: 82 LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV 141
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V ++ ++ S + F KG+D F M GV P+ T ++ C ++ + K+
Sbjct: 142 R-DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE 200
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + G+ +++++ SALV+ Y KC + EA VF+ +P RDVV WN ++ Y + E
Sbjct: 201 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKE 260
Query: 216 FHK-----------------------------------ALEVFRRMSKEGIWMSRFTVTG 240
+ K A+E+FR+M K G + T++
Sbjct: 261 YEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+L A + G+ +H V + + AL+ MY K + + +F+MM KD
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ +WN+++ + GN L LFD+ML + QP+ VTF+ VL CSH + G QI
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 440
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
+ + L + D + ++D+Y++ G + +A M + AS W ++
Sbjct: 441 SMGRDHLVE-------PDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALL 491
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 146/322 (45%), Gaps = 47/322 (14%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+P T+++ + + CA +L+ G+EIH + +R G++ + ++L+++Y+KC ++ A
Sbjct: 178 NPMTVSSILPA---CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREAR 234
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD- 146
VF +L +V ++N +++ ++ N KG F M + GV D+ T+ +I C +
Sbjct: 235 MVF-DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 293
Query: 147 ------------------------VMAVLEV----------KKIHGLVFKLGLDLDVYIG 172
+ ++L K+IH VF+ D+
Sbjct: 294 GRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST 353
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL+ Y KC + + VF+ + +DVV WN M+ A G +AL +F +M +
Sbjct: 354 TALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQ 413
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV-PVMN---ALIDMYGKGKCVGE 288
+ T TGVLS + G + MG D V P N ++D+Y + + E
Sbjct: 414 PNSVTFTGVLSGCSHSRLVEEGVQIFN---SMGRDHLVEPDANHYSCVVDIYSRAGRLNE 470
Query: 289 ALEIFEMME-EKDIFSWNSIMT 309
A + + M E +W +++
Sbjct: 471 AYKFIQGMPMEPTASAWGALLA 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ + + D + +++++ G + ++++ + G +PD+ F AC+
Sbjct: 30 RARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACA 89
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ +++H C + DVF+ NAL+ Y KC + A+ VF +
Sbjct: 90 VSGDALRVKEVHD--------DATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV 141
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+DV SW + Y G ++ +D+F M + +KP+ +T +L AC+ L G+E
Sbjct: 142 RDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKE- 200
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ R+G+V + + ++ + + + EA + MP+ + V W +L A
Sbjct: 201 IHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTA 254
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 206/623 (33%), Positives = 317/623 (50%), Gaps = 57/623 (9%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
+NP S F +G+ L + S + AH +L+ ++LR + P
Sbjct: 1 MNPPRSLFPELPPAGH-------ALLRLVDSCRAPAHLRSLRAAHARLLFLLR--LPSHP 51
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT--YNAMISGFYSNDFAFKGLDFFNHM 125
S + + L P+ T +N ++ G + L F M
Sbjct: 52 ASAAVRVKLIQAYAACAALPAARAVLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASM 111
Query: 126 RQLG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
R G PD YT+P +K C ++ ++IH +LGLD +V++ + ++ Y +C
Sbjct: 112 RPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCG 171
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
++A ++FEE+ RDVV WNAM++G+A G F +A++VFR
Sbjct: 172 RPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRE------------------ 213
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL--EIFEMMEEKDI 301
L+ + K D+G M +++ GK + AL +F+ M K +
Sbjct: 214 -LVALQCPKP-------------DAGT--MASILPSMGKARVEDIALLKGVFDEMRFKGL 257
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SWN+++ V+ H + LF RM G +PD VT +TVLP+C ++AL G++IH
Sbjct: 258 ISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEV 317
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
I + C + + NALMDMY CG +++A+ VF M +DV SW +I YG
Sbjct: 318 I-----KRRRMCSSM---LLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYG 369
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
G G+EA+D+F MC L+PD + FV +L+ACSH+G L G+ + M S + + P +
Sbjct: 370 RHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKL 429
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
EHY C++D+LGRAG + EAY+ + MP + N VW LL A R+H N D+ +AA + +
Sbjct: 430 EHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLR 489
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
L P G YVL+SNIY G++ +V +R M + ++K PG S EL D +HTF D
Sbjct: 490 LAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDT 549
Query: 602 SHPEAKSIYAELHSLTARLREHG 624
SHP++K IY +L L R+RE G
Sbjct: 550 SHPQSKMIYKKLSELLRRIREMG 572
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 320/592 (54%), Gaps = 45/592 (7%)
Query: 39 LQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C + T +L++ + +H +L G+ + SLIN+Y C A VF N
Sbjct: 37 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 96
Query: 98 NVFTYNAM--------ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+V+ +N++ IS FY + A K L+ F M G P+ + I C ++
Sbjct: 97 DVYIWNSLMSASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 156
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K+IH K G +LD Y+ SALV+ Y KC +E A +VF+++P + +V WN+M+ G
Sbjct: 157 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 216
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y G+ +E+ RM EG S+ T+T +L A +G+ +H +
Sbjct: 217 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHANL-------- 268
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
A +F ++ SWN +++ + GN + ++D+M+S
Sbjct: 269 -------------------AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 309
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD+VTF++VLPACS LAAL G+QIH I + L + D++ ++ AL+DMY
Sbjct: 310 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL-------ETDELLLS-ALLDMY 361
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCG+ ++A +F + KKDV SW +MI YG GQ +EAL F M + LKPD VT +
Sbjct: 362 SKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLL 421
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VLSAC H+G + +G +F M S+YG+ P IEHY+C+ID+LGRAG+L EAYE+ P
Sbjct: 422 AVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPE 481
Query: 510 EA-NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ N + TL +A LH L + A+ + + P Y+++ N+Y +G ++
Sbjct: 482 TSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARR 541
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+R M++ +RK PGCSWIE+ D + F + DRSH A+++Y L L+ +
Sbjct: 542 VRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 593
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C+ L+KG++IH + + + L +++L++MYSKC K A +FN
Sbjct: 316 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 375
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + +V ++ MIS + S+ + L F+ M++ G+ PD T ++ C +
Sbjct: 376 SIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 434
Query: 152 E-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
E +K + K G++ + S +++ + + EA ++ ++ P
Sbjct: 435 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 480
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/518 (35%), Positives = 303/518 (58%), Gaps = 18/518 (3%)
Query: 117 KGLDFFNHMRQLGVLPDKYT----------FPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+ + F Q + P +Y+ F +++ C AV+E K HG ++ L
Sbjct: 36 RNISVFASYEQEELSPGRYSDEFNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQ 95
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV + + L+N Y KC F+E A +VF+ + R +V WN M+ Y + +AL++F M
Sbjct: 96 GDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEM 155
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
EG S FT++ VLSA + +H + +K D + V AL+D+Y K +
Sbjct: 156 RNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMI 215
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A+++FE M++K +W+S++ + Q N++ L L+ R + + T S+V+ AC
Sbjct: 216 NDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 275
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S+LAAL+ G+Q+H I +G N VF+ ++ +DMY KCGS+R++ ++F+++
Sbjct: 276 SNLAALIEGKQMHAVIRKSGFGSN--------VFVASSAVDMYAKCGSLRESYIIFSEVQ 327
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+K++ WN +I G+ + KE + +F M + + P+EVTF +LS C H+G + +GR
Sbjct: 328 EKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRR 387
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
F LM + YG+ P + HY+C++D+LGRAG L+EAYEL ++P E +W +LLA+ R+
Sbjct: 388 FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVC 447
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
N +LAE+AA+++F+LEP + GN+VL+SNIY A ++EE+ R +R +V+K G SW
Sbjct: 448 KNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSW 507
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
I++KD +H F + SHP + I L +L LR+ G
Sbjct: 508 IDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFG 545
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/322 (31%), Positives = 172/322 (53%), Gaps = 1/322 (0%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
I LQLCA + + + H +R + LIN YSKC ++ A VF+ +
Sbjct: 67 IEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGM-L 125
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E ++ ++N MI + N + LD F MR G ++T ++ C LE KK
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H L K LDL++Y+G+AL++ Y KC + +A++VFE + + V W++MV GY Q
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +AL ++RR + + ++FT++ V+ A + G+ +H ++ K G+ S V V ++
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASS 305
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
+DMY K + E+ IF ++EK+I WN+I++ + + LF++M G P+
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 365
Query: 336 LVTFSTVLPACSHLAALMHGRQ 357
VTFS++L C H + GR+
Sbjct: 366 EVTFSSLLSVCGHTGLVEEGRR 387
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 329/572 (57%), Gaps = 16/572 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S L++G+ ++ + ++L+++Y+KC +++ A VF+ + E N ++NA+I+G+
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMP-ERNTVSWNALIAGYT 170
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L+ F M + G+ PD+ TF L+ L + ++HG + K G L +
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFL-MHQLHGKIVKYGSALGLT 229
Query: 171 IGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +A + Y +C ++++ ++F+ + +RD++ WNAM+ Y G +A++ F RM +E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289
Query: 230 -GIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKC 285
G+ ++ T ++S+ G + GRV+HG+V+K + PV NALI MY + C
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349
Query: 286 VGE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ E A + F + KD SWNS++T + Q G L+ F M S + D FS L
Sbjct: 350 MMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALR 409
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ S LA L G+QIHG ++ +G A N F++++L+ MY+K G + DA+ F +
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASND--------FVSSSLIFMYSKSGIIDDARKSFEE 461
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
K WN MI GY GQ + +F+ M + K D +TFVG++++CSH+G + +G
Sbjct: 462 ADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG 521
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
E L ME++YGV +EHY C +D+ GRAGQL++A +L +MP E + +VW TLL A R
Sbjct: 522 SEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACR 581
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+HGN +LA A +F EP YVL+S++Y G + + ++ M+++ + K PG
Sbjct: 582 IHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGW 641
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
SWIE+K+ +H+F + D+SHP+ IY L L
Sbjct: 642 SWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 17/349 (4%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ A +VF+E+P RD V WNA++ A G +A + R M +G+ + F + L +
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G + + +K G + V +AL+D+Y K V +A ++F+ M E++ SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA-LMHGRQIHGYIV 363
N+++ + + G+ L LF M G PD TF+++L A + LMH Q+HG IV
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH--QLHGKIV 220
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGM 422
G A + + NA + Y++CGS++D++ +F + +D+ SWN M+ Y
Sbjct: 221 KYGSALG--------LTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH 272
Query: 423 DGQGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSHSGFLS-QGREF--LPLMESRYGVV 478
+G EA+ F M E+ + PD +F ++S+CS G QGR L + + GV
Sbjct: 273 NGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVT 332
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
P + + +AY+ ++ + + V W ++L HG
Sbjct: 333 PVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHG 380
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ + LQ G++IH ++ +G + +SLI MYSK + A F
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V +NAMI G+ + A FN M Q D TF LI C V E +I
Sbjct: 466 SSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 157 -HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ + K G+ L + + V+ Y + +++A K+ + +P D ++W
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 329/572 (57%), Gaps = 16/572 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S L++G+ ++ + ++L+++Y+KC +++ A VF+ + E N ++NA+I+G+
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMP-ERNTVSWNALIAGYT 170
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L+ F M + G+ PD+ TF L+ L + ++HG + K G L +
Sbjct: 171 ESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFL-MHQLHGKIVKYGSALGLT 229
Query: 171 IGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +A + Y +C ++++ ++F+ + +RD++ WNAM+ Y G +A++ F RM +E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289
Query: 230 -GIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKC 285
G+ ++ T ++S+ G + GRV+HG+V+K + PV NALI MY + C
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349
Query: 286 VGE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ E A + F + KD SWNS++T + Q G L+ F M S + D FS L
Sbjct: 350 MMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALR 409
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ S LA L G+QIHG ++ +G A N F++++L+ MY+K G + DA+ F +
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASND--------FVSSSLIFMYSKSGIIDDARKSFEE 461
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
K WN MI GY GQ + +F+ M + K D +TFVG++++CSH+G + +G
Sbjct: 462 ADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG 521
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
E L ME++YGV +EHY C +D+ GRAGQL++A +L +MP E + +VW TLL A R
Sbjct: 522 SEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACR 581
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+HGN +LA A +F EP YVL+S++Y G + + ++ M+++ + K PG
Sbjct: 582 IHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGW 641
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
SWIE+K+ +H+F + D+SHP+ IY L L
Sbjct: 642 SWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 171/349 (48%), Gaps = 17/349 (4%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ A +VF+E+P RD V WNA++ A G +A + R M +G+ + F + L +
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G + + +K G + V +AL+D+Y K V +A ++F+ M E++ SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA-LMHGRQIHGYIV 363
N+++ + + G+ L LF M G PD TF+++L A + LMH Q+HG IV
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMH--QLHGKIV 220
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGM 422
G A + + NA + Y++CGS++D++ +F + +D+ SWN M+ Y
Sbjct: 221 KYGSALG--------LTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH 272
Query: 423 DGQGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSHSGFLS-QGREF--LPLMESRYGVV 478
+G EA+ F M E+ + PD +F ++S+CS G QGR L + + GV
Sbjct: 273 NGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVT 332
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
P + + +AY+ ++ + + V W ++L HG
Sbjct: 333 PVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHG 380
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ + LQ G++IH ++ +G + +SLI MYSK + A F
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V +NAMI G+ + A FN M Q D TF LI C V E +I
Sbjct: 466 SSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 157 -HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ + K G+ L + + V+ Y + +++A K+ + +P D ++W
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 316/583 (54%), Gaps = 28/583 (4%)
Query: 58 MLRTGIIDSPLSITSLINM--YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
M+ TG+I+ + + LI S+ + Y + N PN F++N I GF ++
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTR-NPNTFSWNVAIRGFLDSENP 59
Query: 116 FKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
+ + + + Q G PD YT+P L K C + + +I G V LG D D+++ +A
Sbjct: 60 REAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNA 119
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
+++ + C ++ A K+F++ +RD+V WN+M+NGY + G ++AL +R M EGI
Sbjct: 120 VIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPD 179
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T+ GV+S+ + GR H + + G VP+ NAL+DMY K + A ++F+
Sbjct: 180 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 239
Query: 295 MM----------------EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
M +KD+ WN+++ + L LF+ M + PD VT
Sbjct: 240 SMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 299
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L ACS L AL G IH YI + L+ N V + AL+DMY KCG + A
Sbjct: 300 MVSCLSACSQLGALDVGIWIHHYIEKHELSLN--------VALGTALIDMYAKCGKITKA 351
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF ++ ++ +W +I G + G A+ FS M + + PDEVTF+G+LSAC H
Sbjct: 352 IQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHG 411
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +GR++ M S++ + P ++HY+C++D+LGRAG L EA EL +MP EA+ VVW
Sbjct: 412 GLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGA 471
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
L A R+HGN + E AA ++ Q++P G YVL++N+Y ++E R MRQ+ V
Sbjct: 472 LFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGV 531
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
K PGCS IE+ ++ FI D+SHP+++ IY L LT +L
Sbjct: 532 EKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLE 574
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 189/408 (46%), Gaps = 33/408 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+ CA + ++ G EI ++L G ++I++ C + A +F+ SC +
Sbjct: 86 FKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDK-SCVRD 144
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N+MI+G+ +A++ L+F+ M+ G+ PD+ T ++ C + + ++ H
Sbjct: 145 LVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHC 204
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALK----------------VFEELPLRDVVL 202
+ + GL L V + +AL++ Y+KC +E A K +F+E+P +DVV
Sbjct: 205 YIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVP 264
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNAM+ GY +AL +F M I T+ LSA +G G +H +
Sbjct: 265 WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE 324
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
K V + ALIDMY K + +A+++F+ + ++ +W +I++ GN G +
Sbjct: 325 KHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 384
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR----QIHGYIVVNGLAKNGSCKDIDD 378
F M+ PD VTF +L AC H + GR Q+ ++ K+ SC
Sbjct: 385 YFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSC----- 439
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQ 425
++D+ + G + +A+ + M + D W + + G
Sbjct: 440 ------MVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGN 481
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 19/292 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T I + CA +L G+E H Y+ G+ + PL+ +L++MY KC ++ A +F++
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLA-NALMDMYMKCGNLESARKLFDS 240
Query: 93 LS---------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
++ + +V +NAMI G+ + + L FN M+ + + PD+ T
Sbjct: 241 MTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 300
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
+ C + A+ IH + K L L+V +G+AL++ Y KC + +A++VF+ELP
Sbjct: 301 VSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPG 360
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-V 256
R+ + W A+++G A G H A+ F M + T G+LSA G + GR
Sbjct: 361 RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKY 420
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSI 307
+ K + + ++D+ G+ + EA E+ + M E D W ++
Sbjct: 421 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 472
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 314/571 (54%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+HS +++ G + +LIN YS C + A VF + C+ ++ + ++S + N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCK-DIVVWAGIVSCYVENG 226
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
L + M G +P+ YTF +K + A K +HG + K +LD +G
Sbjct: 227 CFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGV 286
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
L+ Y + M +A KVF E+P DVV W+ M+ + Q G +KA+++F RM + +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVP 346
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ FT++ +L+ + G +HG+VVK+G+D V V NALID+Y K + + A+++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLF 406
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ K++ SWN+++ +E G L +F L VTFS+ L AC+ LA++
Sbjct: 407 AELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASME 466
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG + AK V ++N+L+DMY KCG ++ AQ VF +M DVASW
Sbjct: 467 LGVQVHGLAIKTNNAKR--------VAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASW 518
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY G G++AL +F M + KP+ +TF+GVLS CS++G + QG++ M
Sbjct: 519 NALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMIC 578
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P +EHYTC++ + GR+GQL++A L +P E + ++WR +L+AS N + A
Sbjct: 579 DHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFAR 638
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A+ + ++ P YVL+SN+Y ++ V IR +M+++ V+K PG SWIE + +
Sbjct: 639 RSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIEHQGDV 698
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ K I L L + G
Sbjct: 699 HFFSVGSSDHPDMKLINGMLEWLNMKATRAG 729
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 239/517 (46%), Gaps = 21/517 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIAS------LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
FS + + ++ C+ S L+ C + + + IH +L+ G +
Sbjct: 28 FSVQTAESSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFAT 87
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
L+N Y K K AL +F+ + E N +Y + G+ D + ++ + + G
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMP-ERNNVSYVTLTQGYACQD----PVGLYSRLHREGH 142
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
+ + F +K + +H + KLG D + ++G+AL+N Y C ++ A
Sbjct: 143 ELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARS 202
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VFE + +D+V+W +V+ Y + G F +L++ RM +G + +T L A I +G
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
F + VHG ++K Y+ V L+ +Y + + +A ++F M + D+ W+ ++
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G + + +F RM P+ T S++L C+ G Q+HG +V G
Sbjct: 323 FCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF--- 379
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
D+ DV+++NAL+D+Y KC M A +F ++S K+V SWN +I+GY G+G +AL
Sbjct: 380 ----DL-DVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKAL 434
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+MF ++ EVTF L AC+ + G + L + + +IDM
Sbjct: 435 NMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGL-AIKTNNAKRVAVSNSLIDM 493
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ G + A + M + W L++ HG
Sbjct: 494 YAKCGDIKVAQTVFNEMET-IDVASWNALISGYSTHG 529
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 141/303 (46%), Gaps = 6/303 (1%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FTL++ L CA G+++H +++ G +LI++Y+KC +M A+
Sbjct: 347 NEFTLSSI---LNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAV 403
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F LS + NV ++N +I G+ + K L+ F + V + TF + C +
Sbjct: 404 KLFAELSSK-NVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
++ ++HGL K V + ++L++ Y KC ++ A VF E+ DV WNA++
Sbjct: 463 ASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALI 522
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGY 266
+GY+ G +AL +F M + T GVLS G G+ ++ G
Sbjct: 523 SGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGI 582
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ + ++ ++G+ + +A+ + E + E + W ++++ N + R +
Sbjct: 583 EPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAE 642
Query: 326 RML 328
+L
Sbjct: 643 EIL 645
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 332/593 (55%), Gaps = 20/593 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A CIA ++ C L+ + +H+ +L++ + P TSLI Y+ + +A +F+
Sbjct: 5 ANCIALIKQC---VTLEALKSLHASILKSHL--HPHLCTSLIAQYASLGSISHAYALFST 59
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
S NVF +N +I F + + L ++ M QLG+ +TFP L+K C +A E
Sbjct: 60 -SHSSNVFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKAC-GCLADFE 117
Query: 153 V-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ + H V G + DV++ ++L+ Y + + + +VFE +P R+VV W++MV YA
Sbjct: 118 LGARAHAHVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYA 177
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G + + L +F RM EGI +R ++ ++A+ + +V+ G DS
Sbjct: 178 HNGRYEEGLLLFWRMLNEGIAPNRGSI---VNAMACIHREHEADDFCRVVIDNGLDSDQS 234
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NA + MY + + A F + +KD+ +W S++ + Q L LF +M G
Sbjct: 235 VQNAAMGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLG 294
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD VT +++ A S+LA+ R +HG ++ KN + ++ A++D+Y K
Sbjct: 295 IVPDSVTLLSLIHAVSNLASFQLARFVHG-VITRSFFKN-------HIALDTAVIDLYVK 346
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++ A+ F +MS +++ SW+ MI GYGM G G+EAL +F M +A +KPD + FV V
Sbjct: 347 CGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAFVMV 405
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSH G +++G E M +GV P EHY C++D+LGRAG+L+EA MP
Sbjct: 406 LSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITP 465
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ VW LL A R+H N + AE AA+ +F L+ + G Y+L+SNIY + GK +E DIR
Sbjct: 466 DAGVWGALLGACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRA 525
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ + VRK G + IE+K+ ++TF++ D S+P+ IY+EL L R++E G
Sbjct: 526 LMKSRGVRKTVGHTIIEIKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAG 578
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 321/593 (54%), Gaps = 39/593 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L+ G+ +H ++R G+ + +L+NMYSK ++ E
Sbjct: 17 LKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLE-----------EGG 65
Query: 99 V--FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC-LIKCCCDVMAVLEVKK 155
V F + M+ G R++G + + PC L + + ++ +
Sbjct: 66 VQRFCDSKMLGGI-------------PEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQ 112
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQ----FMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +++++ V+ + Y K + ++ KVFE +P RD+V WN +++G A
Sbjct: 113 MSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNA 172
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G AL + R M + FT++ VL G+ +HG ++ GYD+ V
Sbjct: 173 QNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVF 232
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ ++LIDMY K V ++ +F M+ + D SWNSI+ Q G D L+ F +ML A
Sbjct: 233 IGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK 292
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+P+ V+FS+++PAC+HL L G+Q+HGYI+ + N VF+ +AL+DMY K
Sbjct: 293 IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN--------VFIASALVDMYAK 344
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG++R A+ +F KM D+ SW MI+GY + G +A+ +F M +KP+ V F+ V
Sbjct: 345 CGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAV 404
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH+G + + ++ M Y ++P +EHY V D+LGR G+L EAYE M E
Sbjct: 405 LTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEP 464
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
VW TLLAA R+H N +LAE ++++F ++P + G YVL+SNIY A G++++ +R
Sbjct: 465 TGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRI 524
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + ++K P CSWIE+K+ +H F++ D+SHP I L L ++ G
Sbjct: 525 AMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREG 577
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 216/464 (46%), Gaps = 44/464 (9%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE- 187
G PD FP ++K C + + + +HG + +LG+ D+Y +AL+N Y K +EE
Sbjct: 5 GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG 64
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
++ F + + M+ G + E K + ++ G L+ +
Sbjct: 65 GVQRFCD---------SKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSN 115
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK----CVGEALEIFEMMEEKDIFS 303
+ + N K +D G D+Y K + +G ++FEMM ++DI S
Sbjct: 116 ILYQVN-------TYKKVFDEG-----KTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVS 163
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN++++ + Q G H+ L + M +A +PD T S+VLP + L+ G++IHGY +
Sbjct: 164 WNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAI 223
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
NG DVF+ ++L+DMY KC + D+ VF + + D SWN +I G +
Sbjct: 224 RNGYDA--------DVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQN 275
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIE 482
G E L F M AK+KP+ V+F ++ AC+H L G++ ++ SR+ I
Sbjct: 276 GMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA 335
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ ++DM + G + A + M + V W ++ LHG+ A I+ + ++
Sbjct: 336 --SALVDMYAKCGNIRTARWIFDKM-ELYDMVSWTAMIMGYALHGHAYDA-ISLFKRMEV 391
Query: 543 EPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQQNVRKNPG 583
E G NYV + A G +E ++M Q+ R PG
Sbjct: 392 E-GVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM-TQDYRIIPG 433
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 173/391 (44%), Gaps = 55/391 (14%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L + A NL KG+EIH Y +R G +SLI+MY+KC ++ + V
Sbjct: 197 FTLSSV---LPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV 253
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L + ++N++I+G N +GL FF M + P+ +F ++ C +
Sbjct: 254 FYMLPQHDGI-SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTT 312
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + D +V+I SALV+ Y KC + A +F+++ L D+V W AM+ G
Sbjct: 313 LHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMG 372
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
YA G + A+ +F+RM EG+ + VL+A G + + +
Sbjct: 373 YALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIP 432
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
G+ A+ D+ G+ VG E +E + + I
Sbjct: 433 GLEHYAAVADLLGR---VGRLEEAYEFISDMHI--------------------------- 462
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI-VVNGLAKNGSCKDIDDVFMNNALMD 387
+P +ST+L AC ++H I + ++K D ++ L +
Sbjct: 463 ----EPTGSVWSTLLAAC----------RVHKNIELAEKVSKKLFTVDPQNIGAYVLLSN 508
Query: 388 MYTKCGSMRDAQ-----MVFTKMSKKDVASW 413
+Y+ G +DA+ M M KK SW
Sbjct: 509 IYSAAGRWKDARKLRIAMRDKGMKKKPACSW 539
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
ML++G PD F +VL +C+ + L G +HG I+ G+ D++ NALM
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGF--------DLYTCNALM 52
Query: 387 DMYTKCGSMRDA 398
+MY+K S+ +
Sbjct: 53 NMYSKFWSLEEG 64
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/589 (35%), Positives = 326/589 (55%), Gaps = 22/589 (3%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+ L+KG+E+H+++LR G I +++++ L+NMY+KC + A VF + + ++N
Sbjct: 395 EQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRI-SWN 453
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+I+ N + + + MRQ + P + + C + + +++H K
Sbjct: 454 TIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKW 513
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA----MVNGYAQIGEFHKA 219
GL LD + +ALV Y +C M E ++F + DVV WN+ M + A I E +
Sbjct: 514 GLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITE---S 570
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
++VF M K G+ ++ T L+AL + + G+ +H +++K G V NAL+
Sbjct: 571 VQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSC 630
Query: 280 YGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K V +F M +D SWNS+++ + G+ + M+ + D T
Sbjct: 631 YAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCT 690
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
FS VL AC+ +AAL G ++H + + + L DV + +AL+DMY+KCG + A
Sbjct: 691 FSIVLNACASVAALERGMEMHAFGLRSHLES--------DVVVESALVDMYSKCGRIDYA 742
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF MS+K+ SWN MI GY G G++AL++F M E+ PD VTFV VLSACSH+
Sbjct: 743 SKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHA 802
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G ++ LME YG++P IEHY+CVID+LGRAG+L++ E MP + N ++WRT
Sbjct: 803 GLVERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRT 861
Query: 519 LLAA---SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
+L A S+ DL A++ + +LEP + NYVL S + A G++E+ R M+
Sbjct: 862 VLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKG 921
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K G SW+ L DG+HTFI+ DRSHP K IY +L+ L ++R G
Sbjct: 922 AAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNAG 970
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 175/324 (54%), Gaps = 7/324 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
I+ L CA L GQ++H ++ G+ +D+ +S +L+ MY +C +M +FN++S
Sbjct: 488 ISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVS-NALVKMYGECGRMSECWEIFNSMS 546
Query: 95 CEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++N+++ S+ + + F++M + G++P+K TF + ++VLE+
Sbjct: 547 AH-DVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTP-LSVLEL 604
Query: 154 -KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYA 211
K+IH ++ K G+ D + +AL++ Y K ++ ++F + RD + WN+M++GY
Sbjct: 605 GKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYI 664
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A++ M M T + VL+A + + G +H ++ +S V
Sbjct: 665 YNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVV 724
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V +AL+DMY K + A ++F M +K+ FSWNS+++ + + G L +F+ M +G
Sbjct: 725 VESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESG 784
Query: 332 FQPDLVTFSTVLPACSHLAALMHG 355
PD VTF +VL ACSH + G
Sbjct: 785 ESPDHVTFVSVLSACSHAGLVERG 808
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 221/488 (45%), Gaps = 34/488 (6%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+ +H +++ G+ L+N Y+K ++ A VF+ + N ++ +ISG
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGR-NAVSWTCLISGHVL 143
Query: 112 NDFAFKGLDFFNHMRQ--LGVLPDKYTFPCLIKCCCDV------MAVLEVKKIHGLVFKL 163
+ F M + G P +TF +++ C D AV ++HGLV K
Sbjct: 144 SGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV----QVHGLVSKT 199
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEAL--KVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ + +AL++ Y C L +VF+ P+RD++ WNA+++ YA+ G+
Sbjct: 200 EFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFT 259
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-----VHGIVVKMGYDSGVPVMNAL 276
+FR M + + +LI + + + + V+K G S + V +AL
Sbjct: 260 LFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSAL 319
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQP 334
+ + + + EA +I+ ++E++ + N ++ V +Q G + + R SA
Sbjct: 320 VSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARD-SAAVNV 378
Query: 335 D--LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D +V S + + L GR++H +++ G + ++N L++MY KC
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAG-------HIYRKIAVSNGLVNMYAKC 431
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ A VF M +D SWN +I +G + A+ + M + + P + L
Sbjct: 432 GAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGL 491
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S+C+ G L+ G++ L ++G+ ++ M G G+++E +E+ +M + +
Sbjct: 492 SSCAGLGLLAAGQQ-LHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSM-SAHD 549
Query: 513 PVVWRTLL 520
V W +++
Sbjct: 550 VVSWNSIM 557
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 189/395 (47%), Gaps = 27/395 (6%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +H V K GL D+++ + LVN+Y K ++ A +VF+ +P R+ V W +++G+
Sbjct: 85 ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144
Query: 214 GEFHKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRV--VHGIVVKMGYDSG 269
G A +FR M +E G + FT VL A G + G VHG+V K + S
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204
Query: 270 VPVMNALIDMYGKGKCVGE---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
V NALI MYG VG A +F+ +D+ +WN++M+V+ + G+ T LF
Sbjct: 205 TTVCNALISMYGSCS-VGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRA 263
Query: 327 ML----SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
M +P TF +++ A ++L++ G ++ V K+G D+ ++
Sbjct: 264 MQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRV---LKSGCSSDL---YVG 316
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKL 441
+AL+ + + G + +A+ ++ + +++ + N +I G G+ A ++F A +
Sbjct: 317 SALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAV 376
Query: 442 KPDEVTFVGVLSACSH----SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
D T+V +LSA + L +GRE + + I +++M + G +
Sbjct: 377 NVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAI 434
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++A + M + + W T++ A +G + A
Sbjct: 435 DKACRVFQLMEAR-DRISWNTIITALDQNGYCEAA 468
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 329/601 (54%), Gaps = 21/601 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ P L C++ L G+++H + + G D SL+++YS+ +
Sbjct: 125 YTFPPILKACVS----------LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDV 174
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF ++ + +V ++NAMISGF N A L N M+ GV D T ++ C
Sbjct: 175 AHKVFVDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
V+ IH V K GLD DV++ +AL+N Y K +++A VF+++ +RD+V WN+
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Y Q + AL F+ M GI TV + S + + R + G V++
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353
Query: 266 Y-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ D V + NAL++MY K + A +F+ + KD SWN+++T + Q G + +
Sbjct: 354 WLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY 413
Query: 325 DRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ M P+ T+ +++PA SH+ AL G +IH ++ N L DVF+
Sbjct: 414 NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL--------DVFVAT 465
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L+D+Y KCG + DA +F ++ + WN +I G+ G+G+EAL +F M ++K
Sbjct: 466 CLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA 525
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D +TFV +LSACSHSG + +G++ +M+ YG+ P+++HY C++D+LGRAG L +AYEL
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP + + +W LL+A +++GN +L +A+ R+ +++ + G YVL+SNIY K+
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKW 645
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
E V+ +R R + +RK PG S + + F + +++HP+ IY EL L+A+++
Sbjct: 646 EGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Query: 624 G 624
G
Sbjct: 706 G 706
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 272/504 (53%), Gaps = 23/504 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
N+ +++H+ +L G + + T LIN+Y + + F+ + + N+F++N++
Sbjct: 33 VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSWNSI 91
Query: 106 ISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
IS + + ++ N + + + PD YTFP ++K C +++++ KK+H VF
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVF 148
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+G + DV++ ++LV+ Y + ++ A KVF ++P++DV WNAM++G+ Q G AL
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
V RM EG+ M TV +L NG ++H V+K G DS V V NALI+MY
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + +A +F+ ME +D+ SWNSI+ +EQ + LR F M G +PDL+T +
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+ S L+ R I G+++ DV + NAL++MY K G M A V
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDK-------DVVIGNALVNMYAKLGYMNCAHTV 381
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGF 460
F ++ +KD SWN ++ GY +G EA+D ++ M E + P++ T+V ++ A SH G
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGA 441
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
L QG + + + + + TC+ID+ G+ G+L +A L +P + + V W ++
Sbjct: 442 LQQGMKIHAKL-IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAII 499
Query: 521 AASRLHGNTDLA-----EIAAQRV 539
A+ +HG + A ++ A+RV
Sbjct: 500 ASLGIHGRGEEALQLFKDMLAERV 523
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 302/542 (55%), Gaps = 12/542 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
L +G EIH + + GI DS +++ T ++ MY++C ++ A +F + ++ ++A+I
Sbjct: 4 LGRGTEIHDFARQQGI-DSDVAVATPIMTMYARCGEVDTAKQLFQEIKGR-DLVAWSAII 61
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+ F + + + L F M+ G+ +K + C +V ++ K +H K +D
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
LD+ +G+ALV+ Y KC F AL +F +P +DVV WNAM+NGYAQIGE ALE+F ++
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKC 285
+ + T+ G+L A ++ G +HG ++K G++S V ALIDMY K G
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSL 241
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
G KD SWN ++ + G+ F +M QP++VT TVLPA
Sbjct: 242 SGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPA 301
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
+HL+AL G +H Y++ G + N L+DMY KCG + ++ +F +M
Sbjct: 302 VAHLSALRAGMTLHAYVIRMGFQSKTP--------VGNCLIDMYAKCGWLDHSEKIFHEM 353
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
KD SWN+M+ GY + G+G A+++FS M +++++ D +F+ VLSAC H+G + +GR
Sbjct: 354 KNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGR 413
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M ++ + P +EHY C+ D+LGRAG NE +L +MP E + VW LL AS +
Sbjct: 414 KIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTM 473
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
H N LAE A + +LE + +Y +SN Y G++ +V + R + + +RK+PG S
Sbjct: 474 HSNVQLAEFALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYS 533
Query: 586 WI 587
W+
Sbjct: 534 WV 535
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 5/299 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L A +L +G IH +++ G T+LI+MY+KC + A F+F+
Sbjct: 192 TMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRT 251
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
C + ++N MI+G+ + A F M+ + P+ T ++ + A+
Sbjct: 252 GCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAG 311
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+H V ++G +G+ L++ Y KC +++ + K+F E+ +D V WN M+ GYA
Sbjct: 312 MTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVH 371
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPV 272
G A+E+F RM I + F+ VLSA G GR + + K + +
Sbjct: 372 GRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEH 431
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM---TVHEQCGNHDGTLRLFDRM 327
+ D+ G+ E L++ + M E D W +++ T+H + L D++
Sbjct: 432 YACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKL 490
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 106/238 (44%), Gaps = 31/238 (13%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L AH + L+ G +H+Y++R G LI+MY+KC + ++ +F+
Sbjct: 292 IVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFH 351
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ + V ++N M++G+ + ++ F+ M+ + D ++F ++ C +
Sbjct: 352 EMKNKDTV-SWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIG 410
Query: 152 EVKKIHGLVFK---LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E +KI + K L DL+ Y + + + + E L + + +P+ D +W A++
Sbjct: 411 EGRKIFDSMSKQHQLEPDLEHY--ACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALL 468
Query: 208 NGYA-----QIGEF---------HKALEVFRRMS----KEGIWM------SRFTVTGV 241
Q+ EF HK L + +S + G W S+ T TG+
Sbjct: 469 GASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGL 526
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/599 (33%), Positives = 321/599 (53%), Gaps = 24/599 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + +L +CA +++ Q IH + +G+ + + T+L + Y++ + A VF+
Sbjct: 230 TLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDR- 285
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E +V ++NAM+ + + + F M G+ P K T L+ ++
Sbjct: 286 AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT---LVNASTGCSSLRFG 342
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IHG + GLD D+ +G+AL++ Y +C EEA +F+ +P + V WN M+ G +Q
Sbjct: 343 RMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAGSSQK 401
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM----MGFFKNGRVVHGIVVKMGYDSG 269
G+ +A+E+F+RM EG+ R T +L A+ GR +H +V GY S
Sbjct: 402 GQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASE 461
Query: 270 VPVMNALIDMYGKGKCVGEALEIFE---MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ A++ MY + EA F+ M + D+ SWN+I++ Q G+ L F R
Sbjct: 462 PAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRR 521
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M G P+ +T VL AC+ AAL G +H ++ +G+ N +F+ AL
Sbjct: 522 MDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESN--------LFVATALA 573
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
MY +CGS+ A+ +F K++ ++DV +N MI Y +G EAL +F M + +PDE
Sbjct: 574 SMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDE 633
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+FV VLSACSH G +G E M YG+ P+ +HY C +D+LGRAG L +A EL
Sbjct: 634 QSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIR 693
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
M + +VW+TLL A R + + D +A V +L+PG YV++SNI GK++E
Sbjct: 694 CMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDE 753
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++R M + +RK G SWIE+K +H F++ DRSHP ++ IY EL L A +RE G
Sbjct: 754 AAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIG 812
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 246/502 (49%), Gaps = 27/502 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A L+ CA +L +G+ IH++++ +G+ + L+++Y C + A+ +F +
Sbjct: 130 TFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM 189
Query: 94 SCEPNVFTYNAMISG-FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
E ++ ++NA I+ S D L+ F M+ GV P + T + C + +
Sbjct: 190 --ERDLVSWNAAIAANAQSGDLGI-ALELFQRMQLEGVRPARITLVIALTVCATIR---Q 243
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ IH +V + GL+ + + +AL + Y + + +A +VF+ RDVV WNAM+ YAQ
Sbjct: 244 AQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ 303
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +A +F RM EGI S+ T+ + + F GR++HG ++ G D + +
Sbjct: 304 HGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVL 360
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY + EA +F+ + + SWN+++ Q G + LF RM G
Sbjct: 361 GNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGM 419
Query: 333 QPDLVTFSTVLPACS----HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
P T+ +L A + A+ GR++H IV SC + + A++ M
Sbjct: 420 APVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV--------SCGYASEPAIGTAVVKM 471
Query: 389 YTKCGSMRDAQMVFTKMS---KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
Y CG++ +A F + + + DV SWN +I G GK AL F M + P++
Sbjct: 472 YASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQ 531
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+T V VL AC+ + L++G E + G+ + T + M GR G L A E+
Sbjct: 532 ITCVAVLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFE 590
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
+ E + V++ ++AA +G
Sbjct: 591 KVAVERDVVIFNAMIAAYSQNG 612
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 253/522 (48%), Gaps = 34/522 (6%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
S+SSG H L L+ L +G+ IH+ ++ G+ + L L+ +Y
Sbjct: 21 SSSSGATRPAHLVRL------LRAAGDDRLLSQGRRIHARIVSLGL-EEELG-NHLLRLY 72
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
KC + VF+ L ++ +I+ + + A + + F+ M+Q GV D TF
Sbjct: 73 LKCESLGDVEEVFSRLEVRDEA-SWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTF 131
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
++K C + + + + IH + + GL + + L++ Y C + A+ +FE++
Sbjct: 132 LAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME- 190
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD+V WNA + AQ G+ ALE+F+RM EG+ +R T ++ AL + + + +
Sbjct: 191 RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARIT---LVIALTVCATIRQAQAI 247
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H IV + G + + V AL Y + + +A E+F+ E+D+ SWN+++ + Q G+
Sbjct: 248 HFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHM 307
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
LF RML G P VT CS +L GR IHG + GL +
Sbjct: 308 SEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDR-------- 356
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+ + NAL+DMYT+CGS +A+ +F ++ V SWN MI G GQ K A+++F M
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFKRIPCNAV-SWNTMIAGSSQKGQMKRAVELFQRMQ 415
Query: 438 EAKLKPDEVTFVGVLSACS----HSGFLSQGREFLPLMES-RYGVVPTIEHYTCVIDMLG 492
+ P T++ +L A + + +++GR+ + S Y P I T V+ M
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYA 473
Query: 493 RAGQLNEAYE--LALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G ++EA AM + + V W ++++ HG+ A
Sbjct: 474 SCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 191/404 (47%), Gaps = 21/404 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ D + + ++IH + LGL+ + +G+ L+ YLKC+ + + +VF L +RD
Sbjct: 35 LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
W ++ Y + G+ +A+ +F RM +EG+ T VL A +G GR +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+V+ G + N L+ +YG CV A+ +FE M E+D+ SWN+ + + Q G+
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGI 211
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF RM G +P +T L C A + + IH + +GL + +
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVC---ATIRQAQAIHFIVRESGLEQT--------L 260
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
++ AL Y + G + A+ VF + +++DV SWN M+ Y G EA +F+ M
Sbjct: 261 VVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ P +VT V + CS F GR + G+ I ++DM R G E
Sbjct: 321 GISPSKVTLVNASTGCSSLRF---GR-MIHGCALEKGLDRDIVLGNALLDMYTRCGSPEE 376
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
A L +P N V W T++A S G A QR QLE
Sbjct: 377 ARHLFKRIP--CNAVSWNTMIAGSSQKGQMKRAVELFQR-MQLE 417
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/593 (33%), Positives = 326/593 (54%), Gaps = 22/593 (3%)
Query: 51 GQEIHSYMLRTGIIDSPLSIT----SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
G+E + M+ II + L T SL+ Y KC +++A +F +S +V ++NAMI
Sbjct: 239 GEEKYGAMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMI 297
Query: 107 SGFYSNDFAFKGLDFFNHMRQL--GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+ L F M ++ V P++ TF L+ + A+ ++IH +F+L
Sbjct: 298 AANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLS 357
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
L++D I ++L+ Y KC+ + +A ++FE L LRD++ WN+M+ GY Q + + ++F+
Sbjct: 358 LEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFK 417
Query: 225 RMSKEGIWMSRFTVTGVLSALIM----MGFFKNGRVVHGIVVKMGYDSGVP--VMNALID 278
RM GI ++T + +A + +F+ G+ +HG +++ GV V NA++
Sbjct: 418 RMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILK 477
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +IF+ M+ +D +SWN++M + + + L +F +L GF D V+
Sbjct: 478 MYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVS 537
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF-MNNALMDMYTKCGSMRD 397
S +L +C L +L G+Q H VV L C D + +NNAL+ MY+KCGS++D
Sbjct: 538 LSILLTSCGRLVSLQLGKQFHA--VVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKD 595
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF KM +KDV SW MI G G EAL +F M +KP++VTF+ +L AC+H
Sbjct: 596 AAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAH 655
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA-----YELALAMPNEAN 512
G + +G + M + YG+ P+IEHY C+ID+ GR+GQ + A + + L P +
Sbjct: 656 GGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDD 715
Query: 513 PV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W+ LL A DL AA ++ +LEP Y+L++N+Y + G +E+ + +R
Sbjct: 716 ILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRK 775
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + +RK GCSWI+ + H F++ D HP+ K IY +L L R G
Sbjct: 776 AMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMG 828
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 226/453 (49%), Gaps = 29/453 (6%)
Query: 82 QMKYALFVFNNLSCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
++K A +F+N PN V +++A+I+ + + F M G+ P+ ++
Sbjct: 70 RLKCAQQLFDNF---PNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLAS 126
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-- 197
L+K C + +++HG + G LD I +A + Y +C +E+A +VF+E L
Sbjct: 127 LLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLA 186
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRV 256
D++LWN+++ Y G + + L +F +M G+ + T V++A G K G +
Sbjct: 187 LDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAM 246
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VHG ++K G ++ + N+L+ YGK + A ++FE + KD+ SWN+++ +EQ G
Sbjct: 247 VHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGE 305
Query: 317 HDGTLRLFDRMLSA--GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+ L LF RML QP+ VTF ++L A S L+AL GR+IH +I L
Sbjct: 306 GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEV----- 360
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
D + N+L+ Y+KC + A+ +F ++ +D+ SWN M+ GY + Q D+F
Sbjct: 361 ---DTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFK 417
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSG----FLSQGREFLPLMESRYGVVP---TIEHYTCV 487
M + ++PD + + +A S + +G+E + R + P ++ +
Sbjct: 418 RMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRR--ITPGGVSLSVSNAI 475
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ M + ++ +A ++ M N + W ++
Sbjct: 476 LKMYAKFNRIADAEKIFKGMKNR-DSYSWNAMM 507
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 296/493 (60%), Gaps = 9/493 (1%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P++ + ++ C + + + + IH + + D+ + + ++N Y KC +EEA +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+++P +D+V W +++GY+Q G+ +AL +F +M G + FT++ +L A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+GR +H +K GYD V V ++L+DMY + + EA IF + K++ SWN+++ H
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G + +RLF +ML GF+P T+S+V AC+ +L G+ +H +++ +G
Sbjct: 283 ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSG----- 337
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
++ N L+DMY K GS++DA+ VF ++ K+D+ SWN +I GY G G EAL
Sbjct: 338 ---GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 394
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M +AK++P+E+TF+ VL+ACSHSG L +G+ + LM+ ++ + + H+ V+D+L
Sbjct: 395 LFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLL 453
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG+LNEA + MP + VW LL + R+H N DL AA+++F+L+P G +V
Sbjct: 454 GRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHV 513
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L+SNIY + G+ + +R M++ V+K P CSW+E+++ +H F+++D SHP + I
Sbjct: 514 LLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 573
Query: 612 ELHSLTARLREHG 624
++ +++E G
Sbjct: 574 MWEKISGKIKEIG 586
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 201/380 (52%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C + L++G+ IH+++ + D + + ++NMY+KC ++ A +F+ + + +
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK-D 170
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ +ISG+ + A + L F M LG P+++T L+K + +++H
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D++V++GS+L++ Y + M EA +F L ++VV WNA++ G+A+ GE
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ +F +M ++G + FT + V +A G + G+ VH V+K G + N LID
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 350
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A ++F + ++DI SWNSI++ + Q G L+LF++ML A QP+ +T
Sbjct: 351 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 410
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G+ + + + V + ++D+ + G + +A
Sbjct: 411 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ--------VAHHVTVVDLLGRAGRLNEA 462
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M K A+ W ++
Sbjct: 463 NKFIEEMPIKPTAAVWGALL 482
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 206/588 (35%), Positives = 321/588 (54%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + + G+E+H+++LR G + + +L+ MY+KC + A VF++++ +
Sbjct: 202 LRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVM-D 260
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F M Q V P+ T + + + K++HG
Sbjct: 261 CISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHG 320
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G DV ++L+ Y M +A VF + RD + W AM++GY + G K
Sbjct: 321 LAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDK 380
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + T+ L+A +G G +H + G+ S V V NAL++
Sbjct: 381 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLE 440
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLSAGFQPDL 336
MY K K + +A+E+F+ M EKD+ SW+S++ C NH L F ML A +P+
Sbjct: 441 MYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGF--CFNHRNFEALYYFRHML-ADVKPNS 497
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF L AC+ AL G++IH +++ G+A G ++ NAL+D+Y KCG
Sbjct: 498 VTFIAALAACAATGALRSGKEIHAHVLRCGIAYEG--------YLPNALIDLYVKCGQTG 549
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A F KDV SWNIMI G+ G G+ AL F+ M + PDEVTFV +L ACS
Sbjct: 550 YAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACS 609
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G +S+G E M +Y +VP ++HY C++D+L R GQL EAY MP + VW
Sbjct: 610 RGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVW 669
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL R+H + +L E+AA+ V +LEP G +VL+ ++Y G ++++ +R TMR++
Sbjct: 670 GALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREK 729
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + GCSW+E+K +H F++ D SHP+ + I L + R++ G
Sbjct: 730 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 777
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 267/542 (49%), Gaps = 32/542 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ CAH + H++ LR G ++++M + + +A VF + E
Sbjct: 114 LRACAH------ADDRHAWFGLRLG--------NAMLSMLVRFGETWHAWRVFAKMP-ER 158
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+VF++N M+ G+ + LD ++ M GV PD YTFPC+++ C V +++H
Sbjct: 159 DVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 218
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V + G +V + +AL+ Y KC + A KVF+ + + D + WNAM+ G+ + GE +
Sbjct: 219 AHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECN 278
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F M ++ + + T+T V A ++ + +HG+ VK G+ + V N+LI
Sbjct: 279 AGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLI 338
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY +G+A +F M+ +D SW ++++ +E+ G D L ++ M PD +
Sbjct: 339 QMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDI 398
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T ++ L AC+ L +L G ++H G + V + NAL++MY K +
Sbjct: 399 TIASALAACACLGSLDVGVKLHELAESKGF--------MSYVVVTNALLEMYAKSKRIDK 450
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF M +KDV SW+ MI G+ + + EAL F M A +KP+ VTF+ L+AC+
Sbjct: 451 AIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAA 509
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G L G+E + R G+ +ID+ + GQ A+ A + V W
Sbjct: 510 TGALRSGKEIHAHV-LRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAH-GAKDVVSWN 567
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMR 574
++A HGN + A ++ ++ G C + V + A GG E ++ H+M
Sbjct: 568 IMIAGFVAHGNGETALSFFNQMVKI--GECPDEVTFVALLCACSRGGMVSEGWELFHSMT 625
Query: 575 QQ 576
+
Sbjct: 626 DK 627
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 14 CFNFSTSSGNQTFNHPFT-----LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
CFN F H T IA+L CA L+ G+EIH+++LR GI
Sbjct: 474 CFNHRNFEALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGY 533
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+LI++Y KC Q YA F + +V ++N MI+GF ++ L FFN M ++
Sbjct: 534 LPNALIDLYVKCGQTGYAWAQFCAHGAK-DVVSWNIMIAGFVAHGNGETALSFFNQMVKI 592
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G PD+ TF L+ C V E ++ H + K + ++ + +V+ + + E
Sbjct: 593 GECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTE 652
Query: 188 ALKVFEELPLR-DVVLWNAMVNG-----YAQIGEF 216
A E+P+ D +W A++NG + ++GE
Sbjct: 653 AYNFINEMPITPDAAVWGALLNGCRIHRHVELGEL 687
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 309/547 (56%), Gaps = 18/547 (3%)
Query: 85 YALFVFNN--LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ LF + N L + ++NA + + L+ + M G P+ +TFP K
Sbjct: 5 HPLFPYANKWLDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFK 64
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--LPLRDV 200
C + L ++HG V K G + + ++ ++L++ Y KC + A KVF+E
Sbjct: 65 SCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLA 124
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL---SALIMMGFFKNGRVV 257
V +NA++ GY+ F A+ +FR+M KEG+ ++ T+ G++ + I +GF G +
Sbjct: 125 VCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGF---GTSL 181
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H V+ G D + V N L+ MY + V A ++F+ M EK + +WN++++ + Q G
Sbjct: 182 HACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLA 241
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L L+ +M G PD VT VL +C+HL A GR++ I ++G N
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFN------- 294
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
F+ NAL++MY +CG++ A+ +F M++K+V SW +I GYGM GQG+ A+ +F M
Sbjct: 295 -PFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMI 353
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ PD FV VLSACSH+G +G + ME YG+ P EHY+CV+D+LGRAG+L
Sbjct: 354 SSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRL 413
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA +L +M E + VW LL A ++H N +LAE+A ++V + EP + G YVL+SNI+
Sbjct: 414 EEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIF 473
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G E +L +R MR++ ++K PGCS++E + +H F++ DR+HP+A+ IY L L
Sbjct: 474 SEAGNMEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLE 533
Query: 618 ARLREHG 624
++ G
Sbjct: 534 DIIKRRG 540
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 207/423 (48%), Gaps = 21/423 (4%)
Query: 2 LSKISRINPFSSCFNF-----STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHS 56
L +++R F N ++ F PF +C ASL L G ++H
Sbjct: 28 LRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSC-ASLSLPL------AGSQLHG 80
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV-FTYNAMISGFYSNDFA 115
++++TG P TSLI+MY KC + A VF+ N+ YNA+I+G+ N
Sbjct: 81 HVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ F MR+ GV + T LI C + + +H + GLD D+ +G+ L
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCL 200
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ Y++C ++ A K+F+ +P + ++ WNAM++GYAQ G L+++R+M GI
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDP 260
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T+ GVLS+ +G GR V + G+ + NALI+MY + + +A IF+
Sbjct: 261 VTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDG 320
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M EK++ SW +I+ + G + ++LFD M+S+ PD F +VL ACSH G
Sbjct: 321 MTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHA-----G 375
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWN 414
G + ++ + + + + ++D+ + G + +A+ + MS + D A W
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHY--SCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWG 433
Query: 415 IMI 417
++
Sbjct: 434 ALL 436
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 329/630 (52%), Gaps = 48/630 (7%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ PF L+ C C +G ++H +++ G+ + LI+ Y++C M +
Sbjct: 132 YTFPFVLSGCTKIAAFC-------EGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDH 184
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
VF +S E NV ++ ++I G+ D + + F M + G+ P T C+I C
Sbjct: 185 GHKVFEGMS-ERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACA 243
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + +++ + +LGL L+ + +ALV+ Y+KC ++ A ++F+E R++VL+N
Sbjct: 244 KLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNT 303
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++ YA+ G +AL + M ++G R T+ +SA + G+V HG V++ G
Sbjct: 304 ILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNG 363
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN--------- 316
+ + N +IDMY K A +F++M K + SWNS+ + G+
Sbjct: 364 LEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFN 423
Query: 317 ----------------------HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+ + LF M G + D VT + AC +L A
Sbjct: 424 QIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPEL 483
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
+ +H YI NG+ C D+ +N AL+DM+ +CG + A VF KM+++DV++W
Sbjct: 484 AKWVHTYIEKNGI----PC----DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWT 535
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
I M+G G+ A +F+ M +KPD V FV VL+ACSH G + QG LME
Sbjct: 536 AAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED- 594
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+G+ P IEHY C++D+LGRAG L EA++L +MP E N VVW +LLAA R+H N ++A
Sbjct: 595 HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATY 654
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
AA+R+ +L P G +VL+SNIY + GK+ +V +R +R++ VRK PG S +++ +H
Sbjct: 655 AAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIH 714
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
F S D SHPE I L + R + G
Sbjct: 715 EFTSGDESHPEMTHIALMLQEMNCRFSDAG 744
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 159/593 (26%), Positives = 275/593 (46%), Gaps = 59/593 (9%)
Query: 29 PFTLATCI-ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ---MK 84
P T +C+ SL+ C L + +++H + + G+ P ++T L+N ++ +
Sbjct: 21 PMTKDSCLNESLRCC---KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLD 77
Query: 85 YALFVFN----NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
YA F ++ + +F N++I G+ S + + + M LGV P+ YTFP +
Sbjct: 78 YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFV 137
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ C + A E ++HG V K+GL+ DV+I + L++ Y +C M+ KVFE + R+V
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNV 197
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V W +++ GYA+ +A+ +F M + GI S T+ V+SA + G V
Sbjct: 198 VSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAY 257
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+ ++G ++NAL+DMY K + A +F+ ++++ +N+I++ + + G
Sbjct: 258 IGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 317
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L + D ML G +PD VT + + A + L L +G+ HGY++ NGL S
Sbjct: 318 LAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDS-------- 369
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ N ++DMY KCG A VF MS K V SWN + G+ +G + A ++F+ + E
Sbjct: 370 IGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERN 429
Query: 441 -------------------------------LKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+K D VT +G+ SAC + G +
Sbjct: 430 AVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHT 489
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+E + G+ + T ++DM R G A ++ M E + W + + GN
Sbjct: 490 YIE-KNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM-TERDVSAWTAAIGTMAMEGNG 547
Query: 530 DLAE-IAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQQNV 578
+ A + Q + Q G + VL + A GG+ E+ L I M +
Sbjct: 548 EGATGLFNQMLIQ---GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGI 597
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 314/556 (56%), Gaps = 11/556 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + A +FN + E +V T+ AMI GF S + + F+ M + V
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIP-ERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL-KCQFMEEAL 189
P+ +T ++K C + A+ H L K G+D VY+ +AL++ Y C M++AL
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VF ++PL+ V W ++ G+ G+ + L FR+M E + + F+ + A +
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ G+ +H V K G PVMN+++DMY + + +A F + EK++ +WN+++
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+E+ + + +L LF +M S G++P+ TF+++ AC++LA L G+Q+HG IV G K
Sbjct: 286 GYERSDSSE-SLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDK 344
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N V + N+L+DMY KCGS+ D+ +F M +D+ SW M++GYG G GKEA
Sbjct: 345 N--------VALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ +F M ++ ++PD + F+GVL CSH+G + +G ++ M Y + P E Y CV+D
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVD 456
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+LGRAG++ EA++L MP E + VW LL A + + ++L +AAQRV P G
Sbjct: 457 LLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGT 516
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L+S IY A GK+ E +R M+ N +K G SWIE+++ +++F+ + P + +
Sbjct: 517 YLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWV 576
Query: 610 YAELHSLTARLREHGD 625
+ + L +++ GD
Sbjct: 577 HKVIDVLIWHMKDDGD 592
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 171/327 (52%), Gaps = 6/327 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY-SKCCQMKYALF 88
FT+++ L+ C L G HS + GI S +L++MY + C M AL
Sbjct: 110 FTMSSV---LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALS 166
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VFN++ + V ++ +I+GF + GL F M V P+ ++F + C +
Sbjct: 167 VFNDIPLKTAV-SWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+IH V K GL D + +++++ Y +C ++ +A + F EL ++++ WN ++
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY + + ++L +F +M EG + FT T + +A + G+ VHG +V+ G+D
Sbjct: 286 GYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDK 344
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V ++N+LIDMY K + ++ ++F M +D+ SW ++M + G ++LFD M+
Sbjct: 345 NVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMV 404
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
+G QPD + F VL CSH + G
Sbjct: 405 QSGIQPDRIVFMGVLCGCSHAGLVDKG 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYAL 87
P + + IA+ + CA ++ G++IH+ + + G+ D+P+ + S+++MY +C + A
Sbjct: 209 PNSFSFSIAA-RACASISSYSCGKQIHAAVTKYGLHCDAPV-MNSILDMYCRCNYLCDAK 266
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F L+ E N+ T+N +I+G+ +D + + L F M G P+ +TF + C ++
Sbjct: 267 RCFGELT-EKNLITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANL 324
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +++HG + + G D +V + ++L++ Y KC + ++ K+F ++P RD+V W M+
Sbjct: 325 AVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMM 384
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GY G +A+++F M + GI R GVL G G + ++
Sbjct: 385 IGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI 444
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ + ++D+ G+ V EA ++ E M E D W +++
Sbjct: 445 NPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALL 487
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 329/601 (54%), Gaps = 21/601 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ P L C++ L G+++H + + G D SL+++YS+ +
Sbjct: 125 YTFPPILKACVS----------LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDV 174
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF ++ + +V ++NAMISGF N A L N M+ GV D T ++ C
Sbjct: 175 AHKVFVDMPVK-DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCA 233
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
V+ IH V K GLD DV++ +AL+N Y K +++A VF+++ +RD+V WN+
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Y Q + AL F+ M GI TV + S + + R + G V++
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353
Query: 266 Y-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ D V + NAL++MY K + A +F+ + KD SWN+++T + Q G + +
Sbjct: 354 WLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY 413
Query: 325 DRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ M P+ T+ +++PA SH+ AL G +IH ++ N L DVF+
Sbjct: 414 NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL--------DVFVAT 465
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L+D+Y KCG + DA +F ++ + WN +I G+ G+G+EAL +F M ++K
Sbjct: 466 CLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA 525
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D +TFV +LSACSHSG + +G++ +M+ YG+ P+++HY C++D+LGRAG L +AYEL
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP + + +W LL+A +++GN +L +A+ R+ +++ + G YVL+SNIY K+
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKW 645
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
E V+ +R R + +RK PG S + + F + +++HP+ IY EL L+A+++
Sbjct: 646 EGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSL 705
Query: 624 G 624
G
Sbjct: 706 G 706
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/504 (31%), Positives = 272/504 (53%), Gaps = 23/504 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
N+ +++H+ +L G + + T LIN+Y + + F+ + + N+F++N++
Sbjct: 33 VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSWNSI 91
Query: 106 ISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
IS + + ++ N + + + PD YTFP ++K C +++++ KK+H VF
Sbjct: 92 ISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVF 148
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+G + DV++ ++LV+ Y + ++ A KVF ++P++DV WNAM++G+ Q G AL
Sbjct: 149 KMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALG 208
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
V RM EG+ M TV +L NG ++H V+K G DS V V NALI+MY
Sbjct: 209 VLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYS 268
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + +A +F+ ME +D+ SWNSI+ +EQ + LR F M G +PDL+T +
Sbjct: 269 KFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVS 328
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+ S L+ R I G+++ DV + NAL++MY K G M A V
Sbjct: 329 LTSIFSQLSDQRISRSILGFVIRREWLDK-------DVVIGNALVNMYAKLGYMNCAHTV 381
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGF 460
F ++ +KD SWN ++ GY +G EA+D ++ M E + P++ T+V ++ A SH G
Sbjct: 382 FDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGA 441
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
L QG + + + + + TC+ID+ G+ G+L +A L +P + + V W ++
Sbjct: 442 LQQGMKIHAKL-IKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAII 499
Query: 521 AASRLHGNTDLA-----EIAAQRV 539
A+ +HG + A ++ A+RV
Sbjct: 500 ASLGIHGRGEEALQLFKDMLAERV 523
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 197/562 (35%), Positives = 307/562 (54%), Gaps = 22/562 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMKYALFVFNNLSCE 96
L+ C L++ +H M+ T +I + ++ L++ YS + YA VFN +
Sbjct: 12 LEKCKTMAELKR---LHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQID-R 67
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P+++ +N+MI G+ ++ + L + MRQ G PD +TFP ++K C V + +
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + K G ++DVY +AL+ Y C ME ALKVF+++P +VV W +++ G
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS-------G 269
+A+ V++ M + + T+ VL A GR VH +MG D
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + A++DMY K + A ++F M +++ +WNS++ + Q G + L LF M
Sbjct: 248 VILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
AGF PD TF V+ AC+HL AL+ G+ +H Y+ L DD + AL+DMY
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLT--------DDTAIGTALVDMY 359
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTF 448
K G AQ VF+++ KKDV +W +I+G M G G+EAL F M E L PDE+T+
Sbjct: 360 AKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITY 419
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVLSACSH G + G+ M++ +G+ PT +HY C++D+L RAG+L EA L MP
Sbjct: 420 IGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMP 479
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E N +W LL +++ N D+A+ +RV +LE G YVL+SNIY ++EEV
Sbjct: 480 VEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKM 539
Query: 569 IRHTMRQQNVRKNPGCSWIELK 590
R M+++ ++K+ G S +E+K
Sbjct: 540 ARELMKERKIQKSLGHSSVEMK 561
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + + CAH L GQ +H+Y+ +T + D T+L++MY+K + A VF+
Sbjct: 315 ATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERAQQVFSE 374
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVL 151
L + +V + ++I G + + L FF M++ ++PD+ T+ ++ C V V
Sbjct: 375 LQ-KKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGKV- 432
Query: 152 EVKKIHGLVFK--LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
E K H + K G++ +V+ + + EA ++ E++P+ + +W+A++N
Sbjct: 433 EDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLN 492
Query: 209 G 209
G
Sbjct: 493 G 493
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 314/556 (56%), Gaps = 11/556 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + A +FN + E +V T+ AMI GF S + + F+ M + V
Sbjct: 47 TNLIKSYFDKGLTREACNLFNEIP-ERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEV 105
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL-KCQFMEEAL 189
P+ +T ++K C + A+ H L K G+D VY+ +AL++ Y C M++AL
Sbjct: 106 QPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDAL 165
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
VF ++PL+ V W ++ G+ G+ + L FR+M E + + F+ + A +
Sbjct: 166 SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASIS 225
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ G+ +H V K G PVMN+++DMY + + +A F + EK++ +WN+++
Sbjct: 226 SYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIA 285
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+E+ + + +L LF +M S G++P+ TF+++ AC++LA L G+Q+HG IV G K
Sbjct: 286 GYERSDSSE-SLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDK 344
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N V + N+L+DMY KCGS+ D+ +F M +D+ SW M++GYG G GKEA
Sbjct: 345 N--------VALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEA 396
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ +F M ++ ++PD + F+GVL CSH+G + +G ++ M Y + P E Y CV+D
Sbjct: 397 VKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVD 456
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+LGRAG++ EA++L MP E + VW LL A + + ++L +AAQRV P G
Sbjct: 457 LLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGT 516
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L+S IY A GK+ E +R M+ N +K G SWIE+++ +++F+ + P + +
Sbjct: 517 YLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEIRNEVYSFVVGAKMGPHIEWV 576
Query: 610 YAELHSLTARLREHGD 625
+ + L +++ GD
Sbjct: 577 HKVIDVLIWHMKDDGD 592
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 176/340 (51%), Gaps = 6/340 (1%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS ++ + FT+++ L+ C L G HS + GI S +L++M
Sbjct: 97 FSEMLRSEVQPNAFTMSSV---LKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDM 153
Query: 77 Y-SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
Y + C M AL VFN++ + V ++ +I+GF + GL F M V P+ +
Sbjct: 154 YAASCATMDDALSVFNDIPLKTAV-SWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSF 212
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
+F + C + + K+IH V K GL D + +++++ Y +C ++ +A + F EL
Sbjct: 213 SFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGEL 272
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
++++ WN ++ GY + + ++L +F +M EG + FT T + +A + G+
Sbjct: 273 TEKNLITWNTLIAGYER-SDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQ 331
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VHG +V+ G+D V ++N+LIDMY K + ++ ++F M +D+ SW ++M + G
Sbjct: 332 QVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHG 391
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
++LFD M+ +G QPD + F VL CSH + G
Sbjct: 392 YGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKG 431
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 147/283 (51%), Gaps = 7/283 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYAL 87
P + + IA+ + CA ++ G++IH+ + + G+ D+P+ + S+++MY +C + A
Sbjct: 209 PNSFSFSIAA-RACASISSYSCGKQIHAAVTKYGLHCDAPV-MNSILDMYCRCNYLCDAK 266
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F L+ E N+ T+N +I+G+ +D + + L F M G P+ +TF + C ++
Sbjct: 267 RCFGELT-EKNLITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANL 324
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +++HG + + G D +V + ++L++ Y KC + ++ K+F ++P RD+V W M+
Sbjct: 325 AVLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMM 384
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GY G +A+++F M + GI R GVL G G + ++
Sbjct: 385 IGYGAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNI 444
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
+ + ++D+ G+ V EA ++ E M E D W +++
Sbjct: 445 NPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALL 487
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 295/516 (57%), Gaps = 11/516 (2%)
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
F SND + N + + D+ + L+K C +++ + +H + + D
Sbjct: 37 FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+ +G+ L+N Y KC +EEA KVFE++P RD V W +++GY+Q AL F +M +
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G + FT++ V+ A G +HG VK G+DS V V +AL+D+Y + + +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ +E ++ SWN+++ H + + L LF ML GF+P +++++ ACS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L G+ +H Y++ +G + F N L+DMY K GS+ DA+ +F +++K+
Sbjct: 275 TGFLEQGKWVHAYMIKSG--------EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DV SWN ++ Y G GKEA+ F M ++P+E++F+ VL+ACSHSG L +G +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
LM+ + G+VP HY V+D+LGRAG LN A MP E +W+ LL A R+H N
Sbjct: 387 ELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
T+L AA+ VF+L+P G +V++ NIY +GG++ + +R M++ V+K P CSW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ +H F+++D HP+ + I + + A+++E G
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 196/380 (51%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L +G+ +H+++L++ + +L+NMY+KC ++ A VF + + +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP-QRD 125
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ +ISG+ +D L FFN M + G P+++T +IK ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D +V++GSAL++ Y + M++A VF+ L R+ V WNA++ G+A+ K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F+ M ++G S F+ + A GF + G+ VH ++K G N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +IF+ + ++D+ SWNS++T + Q G + F+ M G +P+ ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G + + +G+ + + + ++D+ + G + A
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGI--------VPEAWHYVTVVDLLGRAGDLNRA 417
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M + A+ W ++
Sbjct: 418 LRFIEEMPIEPTAAIWKALL 437
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 10/293 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ I + A + G ++H + ++ G DS + + ++L+++Y++ M A
Sbjct: 162 FTLSSVIKA---AAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L +V ++NA+I+G K L+ F M + G P +++ L C
Sbjct: 218 VFDALESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + K +H + K G L + G+ L++ Y K + +A K+F+ L RDVV WN+++
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G +A+ F M + GI + + VL+A G G + ++ K G
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGT 320
++D+ G+ + AL E M E W +++ C H T
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA---CRMHKNT 446
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 297/493 (60%), Gaps = 10/493 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P++ + ++ C + + + + IH + + D+ + + ++N Y KC +EEA +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+++P +D+V W +++GY+Q G+ +AL +F +M G + FT++ +L A
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+GR +H +K GYD V V ++L+DMY + + EA IF + K++ SWN+++ H
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G + +RLF +ML GF+P T+S+VL AC+ +L G+ +H +++ +G
Sbjct: 283 ARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSG----- 336
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
++ N L+DMY K GS++DA+ VF ++ K+D+ SWN +I GY G G EAL
Sbjct: 337 ---GQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQ 393
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M +AK++P+E+TF+ VL+ACSHSG L +G+ + LM+ ++ + + H+ V+D+L
Sbjct: 394 LFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMK-KHKIEAQVAHHVTVVDLL 452
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG+LNEA + MP + VW LL A R+H N DL AA+++F+L+P G +V
Sbjct: 453 GRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHV 512
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L+SNIY + G+ + +R M++ V+K P CSW+E+++ +H F+++D SHP + I
Sbjct: 513 LLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQR 572
Query: 612 ELHSLTARLREHG 624
++ +++E G
Sbjct: 573 MWEKISGKIKEIG 585
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 201/380 (52%), Gaps = 11/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C + L++G+ IH+++ + D + + ++NMY+KC ++ A +F+ + + +
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTK-D 170
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ +ISG+ + A + L F M LG P+++T L+K + +++H
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D++V++GS+L++ Y + M EA +F L ++VV WNA++ G+A+ GE
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ +F +M ++G + FT + VL A G + G+ VH V+K G + N LID
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLID 349
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A ++F + ++DI SWNSI++ + Q G L+LF++ML A QP+ +T
Sbjct: 350 MYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEIT 409
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G+ + + + V + ++D+ + G + +A
Sbjct: 410 FLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ--------VAHHVTVVDLLGRAGRLNEA 461
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M K A+ W ++
Sbjct: 462 NKFIEEMPIKPTAAVWGALL 481
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 95/183 (51%), Gaps = 10/183 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--TSLINMYSKCCQMKYAL 87
FT ++ +A CA +L++G+ +H++++++G P++ +LI+MY+K +K A
Sbjct: 308 FTYSSVLA----CASSGSLEQGKWVHAHVIKSG--GQPIAYIGNTLIDMYAKSGSIKDAK 361
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF L + ++ ++N++ISG+ + + L F M + V P++ TF ++ C
Sbjct: 362 KVFRRL-VKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHS 420
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
+ E + L+ K ++ V +V+ + + EA K EE+P++ +W A+
Sbjct: 421 GLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGAL 480
Query: 207 VNG 209
+
Sbjct: 481 LGA 483
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 323/584 (55%), Gaps = 11/584 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ CA ++ G+++H+ +++ ++ +LI MY + QM A VF + + +
Sbjct: 172 IKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAK-D 230
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +++++I+GF F F+ L M GV P++Y F +K C ++ +IH
Sbjct: 231 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 290
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL KL L + G +L + Y +C F++ A +VF ++ D WN ++ G A G
Sbjct: 291 GLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYAD 350
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ VF M G ++ +L A G +H ++K G+ + + V N+L+
Sbjct: 351 EAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLL 410
Query: 278 DMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY + +FE K D SWN+I+T Q LRLF ML + +PD
Sbjct: 411 TMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDH 470
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T +L C +++L G Q+H Y GL + + F+ N L+DMY KCGS+R
Sbjct: 471 ITMGNLLRGCVEISSLKLGSQVHCYSWKTGL--------VLEQFIKNGLIDMYAKCGSLR 522
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F M DV SW+ +I+GY G G+EAL +F M + ++P+ VTFVGVL+ACS
Sbjct: 523 QARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACS 582
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G + +M++ +G+ PT EH +CV+D+L RAG LNEA M E + VVW
Sbjct: 583 HVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVW 642
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLL+A + GN DLA+ AA+ + +++P + +VL+ +++ + G +E+ +R +M++
Sbjct: 643 KTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKH 702
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+V+K PG SWI+++D +H F + D HPE IY LH++ +++
Sbjct: 703 DVKKIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNIWSQM 746
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 251/537 (46%), Gaps = 23/537 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F + N +F L T I+ + C+ +L +G++IH ++L + + +++M
Sbjct: 51 FDFAQKNSSFK--IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM 108
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y KC ++ A VF+ + E N+ +Y ++I+G+ N + + + M Q ++PD++
Sbjct: 109 YGKCGSLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFA 167
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
F +IK C V+ K++H V KL + +AL+ Y++ M +A KVF +P
Sbjct: 168 FGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIP 227
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG----VLSALIMMGFFK 252
+D++ W++++ G++Q+G +AL + M G++ + G S+L+ +
Sbjct: 228 AKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY-- 285
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG+ +K+ +L DMY + + A +F +E D SWN I+
Sbjct: 286 -GSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLA 344
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G D + +F M ++GF PD ++ ++L A + AL G QIH +I+
Sbjct: 345 NNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFII--------K 396
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALD 431
C + D+ + N+L+ MYT C + +F +K D SWN ++ Q E L
Sbjct: 397 CGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLR 456
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M ++ +PD +T +L C L G + + + G+V +IDM
Sbjct: 457 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSWKTGLVLEQFIKNGLIDMY 515
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGH 546
+ G L +A + +M N + V W TL+ A G L + +EP H
Sbjct: 516 AKCGSLRQARRIFDSMDN-GDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNH 571
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 320/598 (53%), Gaps = 41/598 (6%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF T L+L + G IH+ + + G + T+LI+ YS C ++ A
Sbjct: 138 NPFVFTTI---LKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAR 194
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + ++ ++ M++ F ND + L F+ MR +G P+ +TF + K C +
Sbjct: 195 EVFDGI-LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A K +HG K +LD+Y+G AL++ Y K +++A FEE+P +DV+ W+ M+
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMI 313
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
YAQ + +A+E+F +M + + ++FT VL A M G +H V+K+G
Sbjct: 314 ARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 373
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
S V V NAL+D+Y K + ++ +F E D+ WN+++ H Q G+ + LRLF
Sbjct: 374 SDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLN 433
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
ML Q VT+S+ L AC+ LAAL G QIH V K D+ + NAL+
Sbjct: 434 MLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK--------DIVVTNALI 485
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCGS++DA++VF M+K+D SWN MI GY M G
Sbjct: 486 DMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGL--------------------- 524
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
AC+++G L QG+ + M +G+ P IEHYTC++ +LGR G L++A +L
Sbjct: 525 -------ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDE 577
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
+P + + +VWR LL A +H + +L I+AQ V ++EP +VL+SN+Y +++ V
Sbjct: 578 IPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNV 637
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+++ V+K PG SWIE + +H+F D SHPE + I L L + ++ G
Sbjct: 638 ASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAG 695
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 200/379 (52%), Gaps = 9/379 (2%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H + K G LD++ + L+N Y+K F+ +A K+F+E+P R+ + + ++ GYA+
Sbjct: 58 KGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAES 117
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
F +A+E+F R+ +EG ++ F T +L L+ M + G +H + K+G++S V
Sbjct: 118 VRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVG 177
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALID Y V A E+F+ + KD+ SW ++T + L+LF +M GF+
Sbjct: 178 TALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ TF++V AC L A G+ +HG + + D+++ AL+D+YTK G
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL--------DLYVGVALLDLYTKSG 289
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DA+ F ++ KKDV W+ MI Y Q KEA++MF M +A + P++ TF VL
Sbjct: 290 DIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQ 349
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+ L+ G + + + G+ + ++D+ + G++ + L P+ +
Sbjct: 350 ACATMEGLNLGNQ-IHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDV 408
Query: 514 VVWRTLLAASRLHGNTDLA 532
W T++ G+ + A
Sbjct: 409 TPWNTVIVGHVQLGDGEKA 427
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/488 (36%), Positives = 285/488 (58%), Gaps = 9/488 (1%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+ L++ C A+ K++H + ++G+ + + + LVN Y C + A +F+ +
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
R++ LWN M+ GYA G + A+ ++ +M G+ +FT VL A + + G+
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+H V++ G +S V V ALIDMY K CV A ++F+ ++E+D+ WNS++ + Q G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
D +L L M G +P TF + A + L G+++HGY +G N K
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVK-- 241
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
ALMDMY K GS+ A+ +F + +K V SWN MI GY M G EALD+F M
Sbjct: 242 ------TALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM 295
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ K+ PD +TFVGVL+ACSH G L++G+ M S + + PT++HYTC+ID+LG G+
Sbjct: 296 -KGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGR 354
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L EAY+L + M E + VW LL + ++HGN ++ E+A +++ +LEP GNYV++SN+
Sbjct: 355 LEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNM 414
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y GK++ V +R M + ++K+ CSWIE+ + +H F+S D SHP++++IYAEL
Sbjct: 415 YAQAGKWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRT 474
Query: 617 TARLREHG 624
++E G
Sbjct: 475 GKLMKEAG 482
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 221/415 (53%), Gaps = 26/415 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + ++ G+++H+ + + GI +PL T L+N+Y C + A +F+ +S + N
Sbjct: 8 LQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS-KRN 66
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+F +N MI G+ N + + MR G++PDK+TFP ++K C + A+ E KKIH
Sbjct: 67 LFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHK 126
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + GL+ DV++G+AL++ Y KC +E A +VF+++ RDVV WN+M+ Y+Q G+ +
Sbjct: 127 DVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDE 186
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+L + R M+ G+ + T ++A G G+ +HG + G++S V AL+D
Sbjct: 187 SLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMD 246
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V A +FE++EEK + SWN+++T + G+ + L LF M PD +T
Sbjct: 247 MYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHIT 305
Query: 339 FSTVLPACSHLAAL----MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
F VL ACSH L MH R + + ++ +C ++D+ CG
Sbjct: 306 FVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTC-----------MIDLLGHCGR 354
Query: 395 MRDAQMVFTKMS-KKDVASWNIMILGYGMDGQ---GKEALDMFSCMCEAKLKPDE 445
+ +A + +M + D W ++ + G G+ AL+ +L+PD+
Sbjct: 355 LEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKL-----VELEPDD 404
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T + S+ A L +G+E+H Y R G + T+L++MY+K + A +F
Sbjct: 202 TEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLF 261
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
L E V ++NAMI+G+ + A + LD F M+ VLPD TF ++ C +
Sbjct: 262 ELLE-EKRVVSWNAMITGYAMHGHANEALDLFKEMKG-KVLPDHITFVGVLAACSH-GGL 318
Query: 151 LEVKKIH--GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM- 206
L K+H ++ + V + +++ C +EEA K+ E+ + D +W A+
Sbjct: 319 LNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378
Query: 207 ----VNGYAQIGEFHKALE 221
++G ++GE ALE
Sbjct: 379 HSCKIHGNVEMGEL--ALE 395
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/651 (31%), Positives = 337/651 (51%), Gaps = 76/651 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS--LINMYSKCCQMKYALFVFNNLSCE 96
L+LC N + +++H +L+T I P + S LI Y K + YA VF+++ +
Sbjct: 12 LKLCCESQNQTQAKKLHCLILKT--IKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP-Q 68
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHM------------------------------- 125
PN+F++N ++S + + FN M
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128
Query: 126 -RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
+ + ++ TF ++ C V ++I+G + K G DV++GS LV+ Y K
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 185 MEEALKVFEELPLRDVVL-------------------------------WNAMVNGYAQI 213
+ +A + F+E+P R+VV+ W M+ G Q
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +AL++FR M G M +FT VL+A + G+ +H V++ + V V
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K + + A +F+ M +K++ SW +++ + Q G + +++F M G +
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD T +V+ +C++LA+L G Q H +V+GL I + ++NAL+ +Y KCG
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGL--------ISFITVSNALITLYGKCG 420
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S ++ +FT+M+ +D SW ++ GY G+ E + +F M LKPD VTF+GVLS
Sbjct: 421 STENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACS +G + +G ++ M +G++P ++H TC+ID+LGRAG+L EA MP +
Sbjct: 481 ACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDV 540
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
V W TLL++ R+HG+ ++ + AA + LEP + +YVL+S++Y + GK+++V +R M
Sbjct: 541 VGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGM 600
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R + VRK PG SWI+ K +H F + D+S P IYAEL L ++ E G
Sbjct: 601 RDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEG 651
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 211/459 (45%), Gaps = 77/459 (16%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL---------------- 180
+ L+K CC+ + KK+H L+ K + ++ + L+ Y
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 181 ---------------KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
K + + ++F +P RD V WN ++GYA G A+ V++
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 226 MSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M K+ + ++R T + +L GR ++G ++K G+ S V V + L+DMY K
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL--------------------- 323
+ +A F+ M E+++ N+++T +CG + + RL
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 324 ----------FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
F M AGF D TF +VL AC L AL G+QIH Y++
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVI--------RT 299
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D+VF+ +AL+DMY+KC S++ A+ VF +M +K+V SW M++GYG +G +EA+ +F
Sbjct: 300 DHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIF 359
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF--LPLMESRYGVVPTIEHYTCVIDML 491
M ++PD+ T V+S+C++ L +G +F L+ G++ I +I +
Sbjct: 360 FEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVS---GLISFITVSNALITLY 416
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
G+ G ++ L M N + V W LLA G +
Sbjct: 417 GKCGSTENSHRLFTEM-NIRDEVSWTALLAGYAQFGKAN 454
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 295/516 (57%), Gaps = 11/516 (2%)
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
F SND + N + + D+ + L+K C +++ + +H + + D
Sbjct: 37 FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+ +G+ L+N Y KC +EEA KVFE++P RD V W +++GY+Q AL F +M +
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G + FT++ V+ A G +HG VK G+DS V V +AL+D+Y + + +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ +E ++ SWN+++ H + + L LF ML GF+P +++++ ACS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L G+ +H Y++ +G + F N L+DMY K GS+ DA+ +F +++K+
Sbjct: 275 TGFLEQGKWVHAYMIKSG--------EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DV SWN ++ Y G GKEA+ F M ++P+E++F+ VL+ACSHSG L +G +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
LM+ + G+VP HY V+D+LGRAG LN A MP E +W+ LL A R+H N
Sbjct: 387 ELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
T+L AA+ VF+L+P G +V++ NIY +GG++ + +R M++ V+K P CSW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ +H F+++D HP+ + I + + A+++E G
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 196/380 (51%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L +G+ +H+++L++ + +L+NMY+KC ++ A VF + + +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP-QRD 125
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ +ISG+ +D L FFN M + G P+++T +IK ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D +V++GSAL++ Y + M++A VF+ L R+ V WNA++ G+A+ K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F+ M ++G S F+ + A GF + G+ VH ++K G N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +IF+ + ++D+ SWNS++T + Q G + F+ M G +P+ ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G + + +G+ + + + ++D+ + G + A
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGI--------VPEAWHYVTVVDLLGRAGDLNRA 417
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M + A+ W ++
Sbjct: 418 LRFIEEMPIEPTAAIWKALL 437
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 10/293 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ I + A + G ++H + ++ G DS + + ++L+++Y++ M A
Sbjct: 162 FTLSSVIKA---AAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L +V ++NA+I+G K L+ F M + G P +++ L C
Sbjct: 218 VFDALESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + K +H + K G L + G+ L++ Y K + +A K+F+ L RDVV WN+++
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G +A+ F M + GI + + VL+A G G + ++ K G
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGT 320
++D+ G+ + AL E M E W +++ C H T
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA---CRMHKNT 446
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/580 (33%), Positives = 326/580 (56%), Gaps = 12/580 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
L G+ IH + + G + SLI+MYS+ A +F+++ ++ ++NAMI
Sbjct: 230 TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFR-DMGSWNAMI 288
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
SG N A + LD + MR G+ + T ++ C + + IH V K GL+
Sbjct: 289 SGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLE 348
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D+++ +AL+N Y K +E+A K F+++ + DVV WN+++ Y Q + A F +M
Sbjct: 349 FDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKM 408
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKC 285
G T+ + S + KN R VHG +++ G+ V + NA++DMY K
Sbjct: 409 QLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGL 468
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLP 344
+ A ++FE++ KD+ SWN+++T + Q G + ++ M P+ T+ ++LP
Sbjct: 469 LDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
A +H+ AL G +IHG ++ L DVF+ L+D+Y KCG + DA +F +
Sbjct: 529 AYAHVGALQQGMRIHGRVIKTNLHL--------DVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ ++ +WN +I +G+ G ++ L +F M + +KPD VTFV +LSACSHSGF+ +G
Sbjct: 581 VPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEG 640
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ LM+ YG+ P+++HY C++D+LGRAG L AY MP + + +W LL A R
Sbjct: 641 KWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+HGN +L + A+ R+F+++ + G YVL+SNIY GK+E V +R R++ ++K PG
Sbjct: 700 IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGW 759
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S IE+ + F + ++SHP+ K IY EL LTA+++ G
Sbjct: 760 STIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLG 799
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 258/484 (53%), Gaps = 25/484 (5%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+ ++ G + S T L+N+Y+ + + F+ + + +V+T+N+MIS + N
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP-QKDVYTWNSMISAYVHNG 196
Query: 114 FAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ + F + + + PD YTFP ++K C +++ ++IH FKLG +V++
Sbjct: 197 HFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRRIHCWAFKLGFQWNVFVA 253
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++L++ Y + F A +F+++P RD+ WNAM++G Q G +AL+V M EGI
Sbjct: 254 ASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIK 313
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
M+ TV +L +G ++H V+K G + + V NALI+MY K + +A +
Sbjct: 314 MNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKA 373
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ M D+ SWNSI+ +EQ + F +M GFQPDL+T ++ +
Sbjct: 374 FQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDC 433
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
+ R +HG+I+ G ++DV + NA++DMY K G + A VF + KDV S
Sbjct: 434 KNSRSVHGFIMRRGWL-------MEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVIS 486
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
WN +I GY +G EA++++ M E K + P++ T+V +L A +H G L QG M
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG------M 540
Query: 472 ESRYGVVPTIEHY-----TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
V+ T H TC+ID+ G+ G+L +A L +P E++ V W +++ +H
Sbjct: 541 RIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS-VTWNAIISCHGIH 599
Query: 527 GNTD 530
G+ +
Sbjct: 600 GHAE 603
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 15/333 (4%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
T ++ L +C ++ IH Y+++ G+ +LINMY+K ++ A F
Sbjct: 316 FVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQ 375
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +V ++N++I+ + ND FF M+ G PD T L
Sbjct: 376 QMFIT-DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434
Query: 152 EVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ +HG + + G L DV IG+A+V+ Y K ++ A KVFE + ++DV+ WN ++ GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494
Query: 211 AQIGEFHKALEVFRRMSK-------EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AQ G +A+EV++ M + +G W+S +L A +G + G +HG V+K
Sbjct: 495 AQNGLASEAIEVYKMMEECKEIIPNQGTWVS------ILPAYAHVGALQQGMRIHGRVIK 548
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
V V LID+YGK + +A+ +F + ++ +WN+I++ H G+ + TL+L
Sbjct: 549 TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKL 608
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
F ML G +PD VTF ++L ACSH + G+
Sbjct: 609 FGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 641
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 178/375 (47%), Gaps = 13/375 (3%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H L+ G ++I + LVN Y + + F+++P +DV WN+M++ Y
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195
Query: 214 GEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G FH+A+ F ++ I +T VL A G +GR +H K+G+ V V
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFV 252
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+LI MY + G A +F+ M +D+ SWN++++ Q GN L + D M G
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + VT ++LP C L + IH Y++ +GL D+F++NAL++MY K
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEF--------DLFVSNALINMYAKF 364
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G++ DA+ F +M DV SWN +I Y + A F M +PD +T V +
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S + S R + R ++ + V+DM + G L+ A+++ + +
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV-FEIILVKD 483
Query: 513 PVVWRTLLAASRLHG 527
+ W TL+ +G
Sbjct: 484 VISWNTLITGYAQNG 498
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ L AH LQ+G IH +++T + T LI++Y KC ++ A+ +F
Sbjct: 521 GTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQ 580
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E +V T+NA+IS + A K L F M GV PD TF L+ C V E
Sbjct: 581 VPQESSV-TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEE 639
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM----- 206
K L+ + G+ + +V+ + ++E A +++PL+ D +W A+
Sbjct: 640 GKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699
Query: 207 VNGYAQIGEF 216
++G ++G+F
Sbjct: 700 IHGNIELGKF 709
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 190/578 (32%), Positives = 333/578 (57%), Gaps = 10/578 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L G+ +H++++ I + + T+L++MY KC ++ A+ V + L+ E +VF + A+IS
Sbjct: 232 LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKV-SKLTLEYDVFLWTAIIS 290
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
GF + + + F+ M GV+P+ +T+ ++ C ++A+ K+IH V GL+
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350
Query: 168 DVYIGSALVNTYLKCQFM-EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV +G++LV+ Y+KC M E+A++ F + +V+ W +++ G+++ G ++++VF M
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM 410
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
G+ + FT++ +L A + R +HG ++K D+ V V NAL+D Y V
Sbjct: 411 QGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMV 470
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A + MM+ +D+ ++ S+ T Q GNH+ L + M + D + ++ L A
Sbjct: 471 DDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAA 530
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ + + G+Q+H Y V +GL GS + ++N L+D+Y KCG + DA F +++
Sbjct: 531 AGIPIMETGKQLHCYSVKSGL---GSW-----ISVSNGLVDLYGKCGCIHDAHRSFLEIT 582
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+ D SWN +I G +G AL F M A ++PD++T + VL ACSH G + G +
Sbjct: 583 EPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLD 642
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ M ++G+ P ++HY C++D+LGRAG+L EA + MP + + ++++TLL A +LH
Sbjct: 643 YFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLH 702
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN L E A++ +L+P YVL++N+Y G+ E R MR++ VRKNPG SW
Sbjct: 703 GNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSW 762
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+E ++ +H F + D SHP+ I+ ++ SL A+ R G
Sbjct: 763 MEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQG 800
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 278/557 (49%), Gaps = 23/557 (4%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK--CCQM 83
+ + FTL+T + S C+ G + + ++G +P+ ++LI+ YSK C Q
Sbjct: 113 YPNEFTLSTALRS---CSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQE 169
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
Y +F + N ++ ++ M+S F + L ++ M Q GV P+++TF L+
Sbjct: 170 AYRVFEYMN---NGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLL-A 225
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
+ + K +H + ++L++ + +ALV+ Y KCQ +E+A+KV + DV LW
Sbjct: 226 ASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLW 285
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
A+++G+ Q +F +A+ F M G+ + FT +G+L+A + G+ +H VV
Sbjct: 286 TAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVM 345
Query: 264 MGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G ++ V V N+L+DMY K + +A+ F + ++ SW S++ + G + +++
Sbjct: 346 AGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIK 405
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F M G +P+ T ST+L AC + +L R++HGYI+ N A N DV +
Sbjct: 406 VFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN-ADN-------DVVVG 457
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NAL+D Y G + DA V + M +DV ++ + G + AL++ + M + ++
Sbjct: 458 NALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVR 517
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
D + LSA + + G++ L + G+ I ++D+ G+ G +++A+
Sbjct: 518 MDGFSLASFLSAAAGIPIMETGKQ-LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHR 576
Query: 503 LALAMPNEANPVVWRTLL--AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
L + E + V W L+ AS H ++ L+ R+ +EP +L+ G
Sbjct: 577 SFLEI-TEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQI-TCLLVLYACSHG 634
Query: 561 GKYEEVLDIRHTMRQQN 577
G + LD +MR+++
Sbjct: 635 GLVDMGLDYFQSMREKH 651
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 222/422 (52%), Gaps = 11/422 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+++ G IHS +++ G + +L+++Y KC + A +F+ + C +V ++ ++
Sbjct: 30 SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCR-DVASWTMLM 88
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + + L+ F+ M G P+++T ++ C + + LV K G D
Sbjct: 89 SAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFD 148
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+ +GSAL++ Y KC +EA +VFE + D+V W MV+ + + G + +AL+++ RM
Sbjct: 149 SNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRM 208
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G+ + FT +L+A +G G++VH ++ + + + AL+DMY K + +
Sbjct: 209 IQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSI 267
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+A+++ ++ E D+F W +I++ Q + F M ++G P+ T+S +L AC
Sbjct: 268 EDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNAC 327
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM-RDAQMVFTKM 405
S + AL G+QIH +V+ GL +DV + N+L+DMY KC +M DA F +
Sbjct: 328 SSILALDLGKQIHSRVVMAGLE--------NDVSVGNSLVDMYMKCSNMIEDAVRAFRGI 379
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+ +V SW +I G+ G +E++ +F M ++P+ T +L AC L+Q R
Sbjct: 380 ASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTR 439
Query: 466 EF 467
+
Sbjct: 440 KL 441
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 200/402 (49%), Gaps = 18/402 (4%)
Query: 131 LPDKYTFPCL--IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
+P K + L I C+ +V + IH + K+G D+++ + L++ Y KC + EA
Sbjct: 10 IPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEA 69
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++F+E+P RDV W +++ Y +IG +ALE+F M G + + FT++ L + +
Sbjct: 70 RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
F +G +V K G+DS + +ALID Y K C EA +FE M DI SW ++
Sbjct: 130 REFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMV 189
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + G+ L+L+ RM+ G P+ TF +L A S L L +G+ +H ++++ +
Sbjct: 190 SSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIE 248
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
N + + AL+DMY KC S+ DA V + DV W +I G+ + +E
Sbjct: 249 LN--------LVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFRE 300
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY---GVVPTIEHYT 485
A+ F M + + P+ T+ G+L+ACS L G++ + SR G+ +
Sbjct: 301 AITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQ----IHSRVVMAGLENDVSVGN 356
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++DM + + E A N + W +L+A HG
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHG 398
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 205/631 (32%), Positives = 325/631 (51%), Gaps = 81/631 (12%)
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
P+S TSL+ Y+ ++ A+ F+ + + +NA+IS + A + F +
Sbjct: 88 PVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSL 147
Query: 126 RQLGVL-PDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
G L PD Y+F L+ + ++V ++H V K G + + +ALV Y+KC
Sbjct: 148 LASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKC 207
Query: 183 QFME---EALKVFEELPLRDV-------------------------------VLWNAMVN 208
+ E +A KV +E+P +D V+WNAM++
Sbjct: 208 ESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMIS 267
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--- 265
GY G +A E+FRRM E + + FT T VLSA +G F +G+ VHG ++++
Sbjct: 268 GYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNF 327
Query: 266 -YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQC-------- 314
++ +PV NAL+ Y K + A IF+ M KD+ SWN+I++ V C
Sbjct: 328 VPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVF 387
Query: 315 ---------------------GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
G + L+LF++M S +P T++ + AC L AL
Sbjct: 388 EEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALK 447
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
HG+Q+HG+IV G + S NAL+ MY +CG++++A ++F M D SW
Sbjct: 448 HGKQLHGHIVQLGFEGSNSA--------GNALITMYARCGAVKEAHLMFLVMPNIDSVSW 499
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI G G G+EAL++F M + PD ++F+ VL+AC+HSG + +G + M+
Sbjct: 500 NAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKR 559
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G++P +HYT +ID+LGRAG++ EA +L MP E P +W +L+ R G+ +L
Sbjct: 560 DFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGA 619
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
AA ++F++ P H G Y+L+SN Y A G + + +R MR + V+K PGCSWIE + +
Sbjct: 620 HAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKV 679
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F+ D HPEA +Y L + A++R+ G
Sbjct: 680 HVFLVGDTKHPEAHEVYKFLEMVGAKMRKLG 710
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T A IA+ C L+ G+++H ++++ G S + +LI MY++C +K A +
Sbjct: 431 YTYAGAIAA---CGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLM 487
Query: 90 FNNLSCEPNV--FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F + PN+ ++NAMIS + + L+ F+ M G+ PD+ +F ++ C
Sbjct: 488 FLVM---PNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS 544
Query: 148 MAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV-LWNA 205
V E + + G+ + L++ + + EA + + +P +W A
Sbjct: 545 GLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEA 604
Query: 206 MVNGYAQIGEF----HKALEVFR 224
+++G G+ H A ++F+
Sbjct: 605 ILSGCRTSGDMELGAHAADQLFK 627
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 185/487 (37%), Positives = 291/487 (59%), Gaps = 10/487 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+ C + AV E +++H + K VY+ + L+ Y KC+ + A VF+E+ R+
Sbjct: 16 LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV W AM++GY+Q G +AL +F +M + + FT VLS+ F+ GR +H
Sbjct: 76 VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ K Y++ + V ++L+DMY K + EA +FE + E+D+ S +I++ + Q G +
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF R+ G + VT++++L A S LAAL HG+Q+H +++ C+ V
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVL--------RCELPFYV 247
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ N+L+DMY+KCG++ A+ +F M + V SWN M++GY G+G E + +F M E
Sbjct: 248 VLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREE 307
Query: 440 -KLKPDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
K+KPD VTF+ VLS CSH G +G E F +M + IEHY CVID+LGRAG++
Sbjct: 308 NKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRV 367
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA+EL MP E +W +LL A R+H NT++ E R+ ++EP + GNYV++SN+Y
Sbjct: 368 EEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLY 427
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ G++E+V ++R M ++ V K PG SWIEL +HTF +SDRSHP + ++ ++ L
Sbjct: 428 ASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELL 487
Query: 618 ARLREHG 624
+ +E G
Sbjct: 488 VKFKESG 494
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 171/311 (54%), Gaps = 2/311 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C ++ +++GQ +H++M++T + T LI +Y+KC + A VF+ + E N
Sbjct: 17 LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR-ERN 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ AMISG+ FA + L F M + P+++TF ++ C ++IH
Sbjct: 76 VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+FK + +++GS+L++ Y K + EA VFE LP RDVV A+++GYAQ+G +
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F R+ +EG+ + T +L+AL + +G+ VH V++ V + N+LID
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLV 337
MY K + A +IF M + + SWN+++ + + G ++LF M +PD V
Sbjct: 256 MYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSV 315
Query: 338 TFSTVLPACSH 348
TF VL CSH
Sbjct: 316 TFLAVLSGCSH 326
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 338/625 (54%), Gaps = 61/625 (9%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L G+++H++ L+TG T L+ MY + + A VF + + N++++ A++S
Sbjct: 75 LNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMP-QRNLYSWTAILS 133
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK----L 163
+ + + L F ++ + + + FP ++K C + + +++HG+V K +
Sbjct: 134 VHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADM 193
Query: 164 GLDLDVYIGSALVNT---------YLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQ 212
G L ++ G ++ N Y + +E+A ++F+++ L +D + WN+M++GYA
Sbjct: 194 GSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYAD 253
Query: 213 IGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
F +AL +FR + +EGI FT+ VL+A M + G+ VH V G
Sbjct: 254 NLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTF 313
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKD------------------------------- 300
V AL++MY K + + A F+ + E+D
Sbjct: 314 VGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDG 373
Query: 301 ----IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+++WN I++ H + G+++ LRLF M ++ +PD+ T +LPAC+ LA + G+
Sbjct: 374 FEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGK 433
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H + + G DV + AL+DMY KCGS++ A V+ ++S ++ S N M
Sbjct: 434 QVHAHSIRQGYEL--------DVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAM 485
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ Y M G G E + +F M +PD VTF+ VLS+C H+G + G EF LM + Y
Sbjct: 486 LTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYN 544
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
V P+++HYTC++D+L RAG+L+EAYEL +P + + V+W LL + GN +L EIAA
Sbjct: 545 VTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAA 604
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+ + +LEP + GNYVL++N+Y G++ ++ R ++ + + K+PGCSWIE ++ +H F
Sbjct: 605 ESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVF 664
Query: 597 ISSDRSHPEAKSIYAELHSLTARLR 621
+S D+SH + + IY L +L +R
Sbjct: 665 LSCDKSHEKTEDIYTTLDNLNTHMR 689
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 211/459 (45%), Gaps = 66/459 (14%)
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
H+ L D T+ L++ C L + K++H K G ++ + L+ Y +
Sbjct: 52 HLSLLDKQIDSSTYASLLESC----RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRF 107
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+++A VF ++P R++ W A+++ + G F +AL +F ++ + I + F VL
Sbjct: 108 GCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVL 167
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSG-------------VPVMNALIDMYGKGKCVGEA 289
+ + GR +HG+V+K D G V N +I Y + V +A
Sbjct: 168 KLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKA 227
Query: 290 LEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLF-DRMLSAGFQPDLVTFSTVLPAC 346
E+F+ ME KD SWNS+++ + D L +F D ++ G + D T +VL AC
Sbjct: 228 KELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAAC 287
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ +A+L G+++H VV GL N F+ AL++MY+KC ++ AQ+ F ++
Sbjct: 288 ADMASLRRGKEVHAQAVVRGLHWN--------TFVGGALVEMYSKCEDLKAAQLAFDGVT 339
Query: 407 KKDVASWNIMILGYG--------------MDGQGKE---------------------ALD 431
++D A+WN++I GY M G G E AL
Sbjct: 340 ERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALR 399
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F+ M + L+PD T +L AC+ +++G++ + R G + ++DM
Sbjct: 400 LFTEMQTSSLRPDIYTVGIILPACARLATIARGKQ-VHAHSIRQGYELDVHIGAALVDMY 458
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ G + A ++ + N N V +L A +HG+ D
Sbjct: 459 AKCGSIKHAMQVYNRISN-PNLVSQNAMLTAYAMHGHGD 496
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 195/435 (44%), Gaps = 65/435 (14%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLR------------TGI-IDSPLSITSLINMYSKCCQMKY 85
L+LC L+ G+++H +++ +G + + +S ++I Y + ++
Sbjct: 167 LKLCGGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEK 226
Query: 86 ALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKC 143
A +F+ + + ++N+MISG+ N + L F + + G+ D +T ++
Sbjct: 227 AKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAA 286
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C D+ ++ K++H GL + ++G ALV Y KC+ ++ A F+ + RD W
Sbjct: 287 CADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATW 346
Query: 204 NAMVNGYA-----------------------------------QIGEFHKALEVFRRMSK 228
N +++GYA + G AL +F M
Sbjct: 347 NVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQT 406
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
+ +TV +L A + G+ VH ++ GY+ V + AL+DMY K +
Sbjct: 407 SSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKH 466
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A++++ + ++ S N+++T + G+ D + LF ML GF+PD VTF +VL +C H
Sbjct: 467 AMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVH 526
Query: 349 LAALMHGRQ---IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
A+ G + + Y V K+ +C ++D+ ++ G + +A + K+
Sbjct: 527 AGAVETGHEFFDLMTYYNVTPSLKHYTC-----------IVDLLSRAGRLDEAYELVKKI 575
Query: 406 SKK-DVASWNIMILG 419
+K D W ++ G
Sbjct: 576 PRKPDSVMWGALLGG 590
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 335/594 (56%), Gaps = 17/594 (2%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L++ A L G+++H+++++ G + ++++Y KC + +F+ + +
Sbjct: 79 ALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLK- 137
Query: 98 NVFTYNAMISGFYSND--FAFKGLDF--FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV ++N +I G + FA L F F M + P+ T L++ ++ V
Sbjct: 138 NVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGIC 197
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + K G D + ++GSALV++Y K ++EA F+E+ RD+VLWN MV+ YA
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G KA VF+ M EG+ FT T ++++ ++G G+ VHG+++++ +D V V
Sbjct: 258 GVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA 317
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K + + +A + F+ M K+I SW ++ + Q G+ +RL M+
Sbjct: 318 SALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTY 377
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN--NALMDMYTK 391
PD + +++L +C +L+A Q+H Y+V NG + F++ NAL+ Y+K
Sbjct: 378 PDELALASILSSCGNLSATSEVVQVHAYVVENGF----------EAFLSIANALVSAYSK 427
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ A F+ +++ D+ SW ++ Y G K+ +D+F + + ++PD+V F+GV
Sbjct: 428 CGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGV 487
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSAC+H GF+ +G + LM + Y ++P EHYT +ID+LGRAG L+EA L +MP E
Sbjct: 488 LSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEP 547
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
L A +++ N LA A++++F +EP G Y LMSN+Y + G + +V +R
Sbjct: 548 RSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRK 607
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
MR++ K PGCSW+E +HTF+S D++HP A +Y L L ++E D
Sbjct: 608 LMRERCDFKVPGCSWMETAGEVHTFVSRDKTHPRAVQVYGMLDLLVRLMKEEDD 661
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 321/575 (55%), Gaps = 13/575 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQ-MKYALFVFNNLSCEPNVFTYNAMISGFY 110
++IH++++ +G++ ++ + + K + YA N YN +I+ +
Sbjct: 22 KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVGTLPYNTLIAAYA 81
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
S+ + + G +PD YTFP ++K C + V E +++HG+ K+G D+Y
Sbjct: 82 SSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLY 141
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++L++ Y C A +VF+E+ +RDVV W +++GY + G F +A+ +F +M
Sbjct: 142 VQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMD--- 198
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T VL A MG+ G+ VHG+V K + G+ V NAL+DMY K +C+ EA
Sbjct: 199 VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEAR 258
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++F+ + ++DI SW SI++ QC +L LF M +G +PD + ++VL AC+ L
Sbjct: 259 KLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLG 318
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL +GR + YI G+ D+ + AL+DMY KCG + A +F + +++
Sbjct: 319 ALDYGRWVQEYIERQGIEW--------DIHIGTALVDMYAKCGCIEMALHIFNGIPNRNI 370
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN ++ G M G G EAL F M A ++P+EVTF+ +L+AC HSG +++GR +
Sbjct: 371 FTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQ 430
Query: 471 MESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M S+ + P +EHY C+ID+L RAG L+EAY+ MP + ++W LL+A + +GN
Sbjct: 431 MISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNV 490
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+L++ + +L+ G YVL+SNIY ++++V +R M+ + +RK PG S IE+
Sbjct: 491 ELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEV 550
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F+ D +H + I+ L+ L ++ G
Sbjct: 551 DGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEG 585
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 172/319 (53%), Gaps = 4/319 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +Q+G+++H ++ G + SL++ YS C + A VF+ + +
Sbjct: 112 LKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVR-D 170
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ +ISG+ + ++ F ++ V+P+ TF ++ C + + K +HG
Sbjct: 171 VVSWTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHG 227
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
LV+K + + +G+ALV+ Y+KC+ + EA K+F+ELP RD+V W ++++G Q +
Sbjct: 228 LVYKRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKD 287
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+LE+F M G+ R +T VLSA +G GR V + + G + + + AL+D
Sbjct: 288 SLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVD 347
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ AL IF + ++IF+WN+++ G+ L+ F+ M+ AG +P+ VT
Sbjct: 348 MYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVT 407
Query: 339 FSTVLPACSHLAALMHGRQ 357
F +L AC H + GR
Sbjct: 408 FLAILTACCHSGLVAEGRS 426
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 197/592 (33%), Positives = 332/592 (56%), Gaps = 13/592 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C ++ G ++H +++++G ++ +LI+MY+K Q+ +A VF +S + +
Sbjct: 188 IKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTK-D 246
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ +MI+GF + + L F M + GV P+++ F + C ++ ++I
Sbjct: 247 LISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQ 306
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G+ K GL +V+ G +L + Y K F+ A + F ++ D+V WNA++ A + +
Sbjct: 307 GMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVN 365
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ F +M G+ T +L A G +H ++KMG D V N+L+
Sbjct: 366 EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLL 425
Query: 278 DMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY K + +A +F ++ E ++ SWN+I++ Q RLF ML + +PD
Sbjct: 426 TMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDN 485
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T +T+L C+ L +L G Q+H + V +GL + DV ++N L+DMY KCG ++
Sbjct: 486 ITITTILGTCAELVSLEVGNQVHCFSVKSGL--------VVDVSVSNRLIDMYAKCGLLK 537
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF D+ SW+ +I+GY G G+EAL++F M ++P+EVT++GVLSACS
Sbjct: 538 HARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACS 597
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G ME G+ PT EH +C++D+L RAG L EA + + +W
Sbjct: 598 HIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMW 657
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLLA+ + HGN D+AE AA+ + +L+P + VL+SNI+ + G ++EV +R+ M+Q
Sbjct: 658 KTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQM 717
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-DCC 627
V+K PG SWIE+KD +H F S D SHP+ +IY L L ++ + G D C
Sbjct: 718 GVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDPC 769
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/483 (28%), Positives = 232/483 (48%), Gaps = 14/483 (2%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C + +L+ G+ IH ++L++ + ++NMY KC +K A F+ + +V +
Sbjct: 90 CTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLR-SVVS 148
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+ MISG+ N + + M + G PD+ TF +IK CC + ++HG V
Sbjct: 149 WTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVI 208
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K G D + +AL++ Y K + A VF + +D++ W +M+ G+ Q+G +AL
Sbjct: 209 KSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALY 268
Query: 222 VFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+FR M ++G++ + F V SA + + GR + G+ K G V +L DMY
Sbjct: 269 LFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMY 328
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + A F +E D+ SWN+I+ + + + F +M+ G PD +TF
Sbjct: 329 AKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITFL 387
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+L AC L G QIH YI+ GL K + + N+L+ MYTKC ++ DA
Sbjct: 388 NLLCACGSPMTLNQGMQIHSYIIKMGLDKVAA--------VCNSLLTMYTKCSNLHDAFN 439
Query: 401 VFTKMSKK-DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF +S+ ++ SWN ++ Q EA +F M ++ KPD +T +L C+
Sbjct: 440 VFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELV 499
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G + + + G+V + +IDM + G L A + + N + V W +L
Sbjct: 500 SLEVGNQ-VHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQN-PDIVSWSSL 557
Query: 520 LAA 522
+
Sbjct: 558 IVG 560
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 230/517 (44%), Gaps = 64/517 (12%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLC-----AHQTNLQKGQEIHSYMLRTGIIDSPLSIT 71
F+ SG +T P + +C +Q C ++ TN G+ LS
Sbjct: 4 FNHDSGTKTRQAPIHIGSCWNRIQSCDAYGESYDTNYHGGE---------------LSTN 48
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN-HMRQLGV 130
S IN+ C Q Y + LD FN H++ +
Sbjct: 49 SYINLM--CKQQHYR------------------------------EALDTFNFHLKNSSI 76
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
+ T+ LI C +V ++ K+IH + K D+ + + ++N Y KC +++A K
Sbjct: 77 QLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARK 136
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
F+ + LR VV W M++GY+Q G+ + A+ ++ +M + G + + T ++ A + G
Sbjct: 137 AFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGD 196
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
G +HG V+K GYD + NALI MY K + A ++F M+ KD+ SW S++T
Sbjct: 197 IDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITG 256
Query: 311 HEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q G L LF M G +QP+ F +V AC L GRQI G GL +
Sbjct: 257 FTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGR 316
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N VF +L DMY K G + A+ F ++ D+ SWN +I + EA
Sbjct: 317 N--------VFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEA 367
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ F M L PD++TF+ +L AC L+QG + + + G+ ++
Sbjct: 368 IYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYI-IKMGLDKVAAVCNSLLT 426
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M + L++A+ + + N V W +L+A H
Sbjct: 427 MYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH 463
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 207/619 (33%), Positives = 344/619 (55%), Gaps = 52/619 (8%)
Query: 34 TCIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ C++ N L G+++H+++LR G + + +L+ MY+K ++ A +F+
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRT-FTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ ++ ++N +IS ND + L + + M Q GV P+ T ++ C + +
Sbjct: 247 FD-DKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305
Query: 153 VKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K+IH V + DL + ++G ALV+ Y C+ E+ VF+ + R + +WNAM+ GY
Sbjct: 306 GKEIHAFVL-MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364
Query: 211 AQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ ++A+E+F M E G+ + T++ VL A + F + +H VVK G++
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKD 424
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V NAL+DMY + + A IF M KDI SWN+++T + CG HD L L M
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR 484
Query: 330 A------------------GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+P+ VT TVLP C+ LAAL G++IH Y V L+K
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSK-- 542
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
DV + +AL+DMY KCG + ++ VF +MS ++V +WN++I+ YGM G+G+EAL
Sbjct: 543 ------DVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596
Query: 432 MFSCMCEA-----KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+F M E +++P+EVT++ + ++ SHSG + +G M++++G+ PT +HY C
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
++D+LGR+GQ+ EAY L MP+ V W +LL A ++H N ++ EIAA+ +F L+P
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP- 715
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
N+ G K + M+++ VRK PGCSWIE D +H F++ D SHP+
Sbjct: 716 ---------NVLDYGTKQSM---LGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQ 763
Query: 606 AKSIYAELHSLTARLREHG 624
+K ++ L +L+ R+++ G
Sbjct: 764 SKEVHEYLETLSLRMKKEG 782
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 217/420 (51%), Gaps = 16/420 (3%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
+ + + +M GV PD + FP ++K + + K++H VFK G L + ++LV
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y KC ++ A +VF+E+ RD V WN+M+N + E+ A+ +FR M E + + F
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 237 TVTGVLSAL--IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T+ V A ++ G G+ VH V++ G D NAL+ MY K V EA +F+
Sbjct: 188 TLVSVAHACSNLINGLLL-GKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFD 245
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+ ++KD+ SWN+I++ Q + L ML +G +P+ VT ++VLPACSHL L
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G++IH ++++N I++ F+ AL+DMY C ++VF M ++ +A WN
Sbjct: 306 GKEIHAFVLMNN-------DLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWN 358
Query: 415 IMILGYGMDGQGKEALDMFSCMC-EAKLKPDEVTFVGVLSACSH-SGFLSQGREFLPLME 472
MI GY + EA+++F M E L P+ VT VL AC FL +E +
Sbjct: 359 AMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLD--KEGIHSCV 416
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++G ++DM R G++ A + +M N + V W T++ + G D A
Sbjct: 417 VKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM-NRKDIVSWNTMITGYVVCGRHDDA 475
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 150/574 (26%), Positives = 261/574 (45%), Gaps = 51/574 (8%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ A +L G+++H+++ + G SL+NMY KC + A VF+ ++
Sbjct: 90 AVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNR 149
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM-AVLEVKK 155
+V ++N+MI+ + + F M V P +T + C +++ +L K+
Sbjct: 150 DDV-SWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQ 208
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H V + G D + +ALV Y K + EA +F+ +D+V WN +++ +Q
Sbjct: 209 VHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVM 273
F +AL M + G+ + T+ VL A + G+ +H V+ M D V
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL-MNNDLIENSFVG 326
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGF 332
AL+DMY K + +F+ M + I WN+++ + + + LF M+ G
Sbjct: 327 CALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGL 386
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ VT S+VLPAC + + IH +V G K D ++ NALMDMY++
Sbjct: 387 SPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEK--------DKYVQNALMDMYSRM 438
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK------------ 440
G + A+ +F M++KD+ SWN MI GY + G+ +AL++ M +
Sbjct: 439 GRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYE 498
Query: 441 ------LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDM 490
LKP+ VT + VL C+ L +G+E Y V + V +DM
Sbjct: 499 DNKNFPLKPNSVTLMTVLPGCAALAALGKGKEI-----HAYAVKQMLSKDVAVGSALVDM 553
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF-------QLE 543
+ G LN + + M + N + W L+ A +HG + A +R+ ++
Sbjct: 554 YAKCGCLNLSRTVFEQM-SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIR 612
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
P Y+ + G +E L++ +TM+ ++
Sbjct: 613 PNEV-TYIAIFASLSHSGMVDEGLNLFYTMKAKH 645
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 160/355 (45%), Gaps = 14/355 (3%)
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
FH+A+ + M G+ F VL A + G+ +H V K G V N+
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L++MYGK + A +F+ + +D SWNS++ + + + LF ML P
Sbjct: 126 LVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 336 LVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
T +V ACS+L L+ G+Q+H +++ NG + F NNAL+ MY K G
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWR---------TFTNNALVTMYAKLGR 236
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ +A+ +F KD+ SWN +I + + +EAL M ++ ++P+ VT VL A
Sbjct: 237 VYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPA 296
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH L G+E + ++ ++DM Q E L
Sbjct: 297 CSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQ-PEKGRLVFDGMFRRTIA 355
Query: 515 VWRTLLAA-SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
VW ++A R + + E+ + VF+L G N V +S++ A + E LD
Sbjct: 356 VWNAMIAGYVRNEFDYEAIELFVEMVFEL--GLSPNSVTLSSVLPACVRCESFLD 408
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F N+ F T + L CA L KG+EIH+Y ++ + ++L++M
Sbjct: 494 FDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDM 553
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-----VL 131
Y+KC + + VF +S NV T+N +I + + + L F M + G +
Sbjct: 554 YAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIR 612
Query: 132 PDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P++ T+ + V E + + + K G++ + LV+ + +EEA
Sbjct: 613 PNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYN 672
Query: 191 VFEELP--LRDVVLWNAMVNGYAQIGEFHKALEV 222
+ + +P ++ V W++++ G +I H+ LE+
Sbjct: 673 LIKTMPSNMKKVDAWSSLL-GACKI---HQNLEI 702
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/451 (41%), Positives = 273/451 (60%), Gaps = 13/451 (2%)
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ + L+N Y+K + +A VF+++P R+VV W M++ Y+ KALE M +E
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G+ + FT + VL A G F N R +H ++K+G DS V V +ALID+Y + + A
Sbjct: 61 GVRPNMFTYSSVLRACD--GLF-NLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
L +F+ M D+ W+SI+ Q + D LRLF RM AGF T ++VL AC+ L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A L GRQ+H +++ K D+ +NNAL+DMY KCGS+ DA VF +M +KD
Sbjct: 178 ALLELGRQVHVHVL----------KYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKD 227
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V SW+ MI G +G KEAL +F M +KP+ VT VGVL ACSH+G + +G +
Sbjct: 228 VISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFH 287
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M+ +G+ P EHY C+ID+LGRAG+L+EA +L M E + V WR LL A R+H N
Sbjct: 288 SMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV 347
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
D+A AA+++ +L+P G YVL+SNIY ++ +V ++R TM + ++K PGCSWIE+
Sbjct: 348 DVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEV 407
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+H FI DRSHP+ + I +L+ L +L
Sbjct: 408 SKQIHAFILGDRSHPQIREINIQLNQLIYKL 438
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 163/286 (56%), Gaps = 6/286 (2%)
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG 129
I LINMY K + A VF+ + + NV ++ MIS + + K L+F M + G
Sbjct: 3 INILINMYVKFGLLHDAQDVFDKMP-DRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
V P+ +T+ +++ C + ++++H + K+GLD DV++ SAL++ Y + +E AL
Sbjct: 62 VRPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+VF+E+ D+V+W++++ G+AQ + +AL +F+RM + G + T+T VL A +
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ GR VH V+K YD + + NAL+DMY K + +A +F M EKD+ SW++++
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
Q G L+LF+ M G +P+ VT VL ACSH + G
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 140/261 (53%), Gaps = 7/261 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+++H +++ G+ ++LI++YS+ +++ AL VF+ + ++ ++++I+GF
Sbjct: 83 RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM-VTGDLVVWSSIIAGFAQ 141
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGLDLDVY 170
N + L F M++ G L + T +++ C +A+LE+ +++H V K D D+
Sbjct: 142 NSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG-LALLELGRQVHVHVLK--YDQDLI 198
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +AL++ Y KC +E+A VF + +DV+ W+ M+ G AQ G +AL++F M G
Sbjct: 199 LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG 258
Query: 231 IWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
I + T+ GVL A G + G H + G D G +ID+ G+ + EA
Sbjct: 259 IKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEA 318
Query: 290 LEIFEMME-EKDIFSWNSIMT 309
+++ ME E D +W +++
Sbjct: 319 VDLINEMECEPDAVTWRALLN 339
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 195/575 (33%), Positives = 314/575 (54%), Gaps = 15/575 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+ +H+ + +G ++L +Y + A VF+ + P+ +N +++G
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVP-SPDTVLWNTLLAGLSG 201
Query: 112 NDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
++ L+ F M G V PD T ++ +V + +H K GL +
Sbjct: 202 SE----ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEH 257
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L++ Y KC ME A +F+ + D+V +NA+++GY+ G ++E+F+ + G
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ S T+ ++ G +H VVK G D+ PV AL +Y + + A
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
F+ M EK + SWN++++ + Q G + + LF +M + +P+ +T S+ L AC+ L
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+ +H I L N V++ AL+DMY KCGS+ +A+ +F M K+V
Sbjct: 438 ALSLGKWVHKIIANEKLELN--------VYVMTALIDMYVKCGSIAEARCIFDSMDNKNV 489
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN+MI GYG+ GQG EAL ++ M +A L P TF+ VL ACSH G + +G
Sbjct: 490 VSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRS 549
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA-NPVVWRTLLAASRLHGNT 529
M S YG+ P IEH TC++D+LGRAGQL EA+EL P A P +W LL A +H +
Sbjct: 550 MTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDG 609
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
DLA++A+Q++F+LEP + G YVL+SN+Y + +Y E +R + + + K PGC+ IE+
Sbjct: 610 DLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEI 669
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
D H F++ DR+HP++ +IY L LTA++ E G
Sbjct: 670 GDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAG 704
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 192/393 (48%), Gaps = 21/393 (5%)
Query: 33 ATCIAS-LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+T +AS L A N G+ +H++ + G+ +T LI++Y+KC M+ A +F+
Sbjct: 221 STTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFD 280
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ P++ TYNA+ISG+ N ++ F + +G+ P T LI
Sbjct: 281 RME-GPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEP 339
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+H V K GLD + + +AL Y + M+ A + F+ +P + + WNAM++GYA
Sbjct: 340 LAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYA 399
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G A+ +F++M + + T++ LSA +G G+ VH I+ + V
Sbjct: 400 QNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVY 459
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
VM ALIDMY K + EA IF+ M+ K++ SWN +++ + G L+L+ M+ A
Sbjct: 460 VMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAH 519
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQI-----HGYIVVNGLAKNGSCKDIDDVFMNNALM 386
P TF +VL ACSH + G + Y + G+ ++ +C ++
Sbjct: 520 LHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI-EHCTC-----------MV 567
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVAS--WNIMI 417
D+ + G +++A + ++ K V W ++
Sbjct: 568 DLLGRAGQLKEAFELISEFPKSAVGPGIWGALL 600
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 175/381 (45%), Gaps = 15/381 (3%)
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A ++ +H L G D ++ SAL Y +A KVF+ +P D VLWN ++
Sbjct: 138 ASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA 197
Query: 209 GYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G + +ALE F RM+ G + T+ VL A + GR VH K G
Sbjct: 198 GLSG----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLA 253
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V+ LI +Y K + A +F+ ME D+ ++N++++ + G ++ LF +
Sbjct: 254 QHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKEL 313
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G +P T ++P S +H ++V GL N ++ AL
Sbjct: 314 VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAP--------VSTALTT 365
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y + M A+ F M +K + SWN MI GY +G + A+ +F M ++P+ +T
Sbjct: 366 LYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLT 425
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
LSAC+ G LS G+ ++ + + + T +IDM + G + EA + +M
Sbjct: 426 ISSALSACAQLGALSLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEARCIFDSM 484
Query: 508 PNEANPVVWRTLLAASRLHGN 528
N+ N V W +++ LHG
Sbjct: 485 DNK-NVVSWNVMISGYGLHGQ 504
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 202/651 (31%), Positives = 337/651 (51%), Gaps = 72/651 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ C N + +++H ++RT +LIN Y K +K A VF+++ +
Sbjct: 10 AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP-Q 68
Query: 97 PNVFTYN-------------------------------AMISGFYSNDFAFKGLDFFNHM 125
PN+F++N +++SG+ N + + +N M
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMM 128
Query: 126 RQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY----- 179
+ G V ++ TF ++ + V ++IHG +FK G +++GS LV+ Y
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF 188
Query: 180 --------------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
L+C+F+ EA ++F+ +P +D + W ++ G Q
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G F +A++ F+ M EG M +FT VL+A G+ +H +++ Y + V
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+AL+DMY K + V A +F M K++ SW +++ + Q G + +R+F M
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIH 368
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD T +V+ +C++LA+L G Q HG + +GL I V ++NAL+ +Y KCG
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHGQALASGL--------ICFVTVSNALITLYGKCG 420
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ A +F +M +D SW ++ GY G+ E + +F M + PD VTFVGVLS
Sbjct: 421 SLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLS 480
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACS +G + +G + M + + P +HYTC+ID+L RAG+L EA MP +
Sbjct: 481 ACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDA 540
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ W TLL++ RL+GN ++ + AA+ + +LEP + +Y+L+S+IY A GK+++V +R M
Sbjct: 541 IGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGM 600
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R+ V+K PG SWI+ K+ +H F + DRS P + IYA+L SL ++ E G
Sbjct: 601 REMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEG 651
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 213/457 (46%), Gaps = 73/457 (15%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+ +K CC+ +VKK+H + + + + ++ + L+NTY K ++ A VF+ +P
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 197 LRDVVLWNAMVNGYAQIGEFH-------------------------------KALEVFRR 225
++ WN +++ Y+++G +++ V+
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 226 MSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG- 283
M K+G + ++R T + +L GF GR +HG + K GY S + V + L+DMY K
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 284 ----------------------------KC--VGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
+C + EA ++F+ M EKD SW +I+T Q
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G + F M GF D TF +VL AC AL G+QIH YI+
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQ----- 302
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D++F+ +AL+DMY KC +++ A+ VF KM K+V SW M++GYG +G +EA+ +F
Sbjct: 303 ---DNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIF 359
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M ++ PD+ T V+S+C++ L +G +F + G++ + +I + G+
Sbjct: 360 CDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALAS-GLICFVTVSNALITLYGK 418
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
G L A++L M + V W L++ G +
Sbjct: 419 CGSLEHAHQLFHEMKIR-DEVSWTALVSGYAQFGKAN 454
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 201/586 (34%), Positives = 317/586 (54%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y K + +AL +F+++ E +V ++N M+S + + LD M+ GV
Sbjct: 209 SMLVGYVKTYGVDHALELFDSMP-ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SALV Y KC +EA V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGV 327
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W ++ G+ Q G F +++E+F +M E + + +F + ++S
Sbjct: 328 FNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G V V N+LI MY K + A IF M EKDI SW S++T H
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAH 447
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLS-AGFQPDLVT 338
Q GN DG LR+++ MLS +PD VT
Sbjct: 448 SQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDG-LRMYNVMLSEKDVRPDWVT 506
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ L A G QI G V GL I D + NA++ MY+KCG + +A
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGL--------ILDTSVANAVITMYSKCGRILEA 558
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF ++ KD+ SWN MI GY G GK+A+++F + + KPD +++V VLS CSHS
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 618
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M+ + + P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 619 GLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGA 678
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+LM+ IY GK ++ IR MR + +
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+ + +H F + D SHP+ +I +L L ++ G
Sbjct: 739 KKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLG 784
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 41/359 (11%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA ++L+ G+++H+ ++R P ++L+ +Y+KC K A VFN+L
Sbjct: 272 TYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSL 331
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV + +I+GF + + ++ FN MR + D++ LI CC M +
Sbjct: 332 HDRNNV-AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G V + ++L++ Y KC ++ A +F + +D+V W +M+ ++Q+
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQV 450
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG------------------------ 249
G KA E F MS + + T +L A I G
Sbjct: 451 GNIAKAREFFDGMSTKNV----ITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVT 506
Query: 250 ---FFKN---------GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
FK G + G VK+G V NA+I MY K + EA ++F+ +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
KDI SWN+++T + Q G + +FD +L G +PD +++ VL CSH + G+
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/519 (22%), Positives = 228/519 (43%), Gaps = 75/519 (14%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VL 131
++N Y K ++ A+ +F + +V ++N ++SG++ + L+ F M + G
Sbjct: 77 MLNGYVKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSS 135
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF------- 184
P+ +TF +K C + ++ G+V K G D + +ALV+ +++C
Sbjct: 136 PNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRL 195
Query: 185 ------------------------MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
++ AL++F+ +P RDVV WN MV+ +Q G +AL
Sbjct: 196 FVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 255
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
++ M +G+ + T T L+A + + G+ +H V++ V +AL+++Y
Sbjct: 256 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELY 315
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K C EA +F + +++ +W ++ Q G ++ LF++M + D +
Sbjct: 316 AKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALA 375
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T++ C L GRQ+H + +G I V ++N+L+ MY KC +++ A+
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSG--------QIQAVVVSNSLISMYAKCDNLQSAES 427
Query: 401 VFTKMSKKDVAS-------------------------------WNIMILGYGMDGQGKEA 429
+F M++KD+ S WN M+ Y G ++
Sbjct: 428 IFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDG 487
Query: 430 LDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
L M++ M E ++PD VT+V + C+ G G + + + G++ VI
Sbjct: 488 LRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIG-RTVKVGLILDTSVANAVI 546
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G++ EA ++ N + V W ++ HG
Sbjct: 547 TMYSKCGRILEARKV-FDFLNVKDIVSWNAMITGYSQHG 584
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 204/449 (45%), Gaps = 50/449 (11%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+V + ++N Y+K + +A+++F +P RDV WN +++GY Q ++ +LE F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 228 KEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM------- 279
+ G + FT + + +G + G+V K G V AL+DM
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTV 189
Query: 280 ------------------------YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
Y K V ALE+F+ M E+D+ SWN +++ Q G
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L + M S G + D T+++ L AC+ L++L G+Q+H ++ +N C
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI-----RNLPCI- 303
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
D ++ +AL+++Y KCG ++A+ VF + ++ +W ++I G+ G E++++F+
Sbjct: 304 --DPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQ 361
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + D+ ++S C L GR+ L + G + + +I M +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC-LKSGQIQAVVVSNSLISMYAKCD 420
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGHCGNYVLM 553
L A + M NE + V W +++ A GN IA R F + + + M
Sbjct: 421 NLQSAESIFRFM-NEKDIVSWTSMITAHSQVGN-----IAKAREFFDGMSTKNVITWNAM 474
Query: 554 SNIYVAGGKYEEVLDIRHTM-RQQNVRKN 581
Y+ G E+ L + + M +++VR +
Sbjct: 475 LGAYIQHGAEEDGLRMYNVMLSEKDVRPD 503
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 36/322 (11%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LAT I+ C + +L G+++HS L++G I + + SLI+MY+KC ++ A +
Sbjct: 372 FALATLISG---CCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESI 428
Query: 90 FNNLS------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
F ++ NV T+NAM+ + + GL
Sbjct: 429 FRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGL 488
Query: 120 DFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
+N M + V PD T+ L K C D+ A +I G K+GL LD + +A++
Sbjct: 489 RMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITM 548
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y KC + EA KVF+ L ++D+V WNAM+ GY+Q G +A+E+F + K G +
Sbjct: 549 YSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 608
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
VLS G + G+ ++ ++ G+ + ++D+ G+ + EA ++ + M
Sbjct: 609 VAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMP 668
Query: 298 EKDIFS-WNSIMTVHEQCGNHD 318
K W ++++ + GN++
Sbjct: 669 MKPTAEVWGALLSACKIHGNNE 690
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 350 AALMHGRQIHGYIVVNGL--AKNGSCKDI--DDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
A + +H Y+ L A+ DI +V +N +++ Y K G + DA +F +M
Sbjct: 38 AVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRM 97
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQG 464
+DVASWN ++ GY Q +L+ F M + P+ TF + +C G S
Sbjct: 98 PARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLA 157
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ L +++ ++G + ++DM R G ++ A L
Sbjct: 158 LQLLGMVQ-KFGSQDDSDVAAALVDMFVRCGTVDLASRL 195
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 322/584 (55%), Gaps = 11/584 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ CA +++ G+++H+ +++ ++ +LI MY + QM A VF + + +
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-D 233
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +++++I+GF F F+ L M GV P++Y F +K C ++ +IH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL K L + G +L + Y +C F+ A +VF+++ D WN ++ G A G
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ VF +M G ++ +L A G +H ++K G+ + + V N+L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 278 DMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY + +FE D SWN+I+T Q LRLF ML + +PD
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T +L C +++L G Q+H Y + GLA + F+ N L+DMY KCGS+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP--------EQFIKNGLIDMYAKCGSLG 525
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F M +DV SW+ +I+GY G G+EAL +F M A ++P+ VTFVGVL+ACS
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G + M++ +G+ PT EH +CV+D+L RAG+LNEA M E + VVW
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLL+A + GN LA+ AA+ + +++P + +VL+ +++ + G +E +R +M++
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+V+K PG SWIE++D +H F + D HPE IY LH++ +++
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 264/568 (46%), Gaps = 24/568 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F + N +F L T I+ + C+ +L +G++IH ++L + + +++M
Sbjct: 54 FDFAQKNSSFK--IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM 111
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y KC ++ A VF+ + E N+ +Y ++I+G+ N + + + M Q ++PD++
Sbjct: 112 YGKCGSLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
F +IK C V K++H V KL + +AL+ Y++ M +A +VF +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG----VLSALIMMGFFK 252
++D++ W++++ G++Q+G +AL + M G++ + G S+L+ +
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY-- 288
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG+ +K +L DMY + + A +F+ +E D SWN I+
Sbjct: 289 -GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G D + +F +M S+GF PD ++ ++L A + AL G QIH YI+ G
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF----- 402
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALD 431
+ D+ + N+L+ MYT C + +F + D SWN ++ Q E L
Sbjct: 403 ---LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M ++ +PD +T +L C L G + + + G+ P +IDM
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ G L +A + +M N + V W TL+ A G L + +EP H
Sbjct: 519 AKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV-T 576
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+V + G EE L + TM+ ++
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEH 604
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 213/462 (46%), Gaps = 34/462 (7%)
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
N C+ N Y + F DFA K F +R T+ LI C ++
Sbjct: 39 NSLCKSNF--YREALEAF---DFAQKNSSFKIRLR---------TYISLICACSSSRSLA 84
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +KIH + D + + +++ Y KC + +A +VF+ +P R++V + +++ GY+
Sbjct: 85 QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS 144
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G+ +A+ ++ +M +E + +F ++ A G+ +H V+K+ S +
Sbjct: 145 QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
NALI MY + + +A +F + KD+ SW+SI+ Q G L MLS G
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 332 -FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
F P+ F + L ACS L +G QIHG + + LA N +L DMY
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA--------IAGCSLCDMYA 316
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG + A+ VF ++ + D ASWN++I G +G EA+ +FS M + PD ++
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L A + LSQG + + ++G + + ++ M L + L N
Sbjct: 377 LLCAQTKPMALSQGMQIHSYI-IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL------EPGH 546
A+ V W T+L A H + R+F+L EP H
Sbjct: 436 ADSVSWNTILTACLQHEQP----VEMLRLFKLMLVSECEPDH 473
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/588 (32%), Positives = 317/588 (53%), Gaps = 57/588 (9%)
Query: 44 HQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
H +N L + +IH+ + + + +T LI+ + YAL +F PN+F +
Sbjct: 48 HASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFD-HPNLFVF 106
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
NA+I G N + F M +L + PD+ T P ++K ++ V + +HG V K
Sbjct: 107 NALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMK 166
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD----VVLWNAMVNGYAQIGEFHK 218
LGL+ D ++ +LV+ Y+K + L++F+E P R+ ++LWN ++NG ++G+ K
Sbjct: 167 LGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226
Query: 219 ALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A +F M + G W S ++ GF +NG +
Sbjct: 227 AASLFEAMPERNAGSWNS-----------LINGFVRNGDL-------------------- 255
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
A E+F M EK++ SW +++ Q G+H+ L +F RML G +P+
Sbjct: 256 ----------DRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPND 305
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T + L AC+ + AL G +IH Y+ NG N + AL+DMY KCG+++
Sbjct: 306 LTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRG--------IGTALVDMYAKCGNIK 357
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A VF + KD+ +W++MI G+ + G +AL F M A + PDEV F+ +L+ACS
Sbjct: 358 SASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACS 417
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG + QG F M Y + PT++HYT ++D+LGRAG+L+EA +MP + V+W
Sbjct: 418 HSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIW 477
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L A R H N ++AE+ A+++ QLEP H G+YV +SN+Y A G++E+V +R M+ +
Sbjct: 478 GALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNR 537
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V K+PG S+IE++ +H+F++ D +H A+ I +L +TA ++ G
Sbjct: 538 GVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEG 585
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 332/644 (51%), Gaps = 73/644 (11%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSP-LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT-- 101
+T ++ +H +L+T + P + L+ Y+K ++ A VF+ + +PN+FT
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMP-DPNLFTRN 83
Query: 102 -----------------------------YNAMISGFYSNDFAFKGLDFFNHM-RQLGVL 131
YNA+I+GF S + + + + R+ V
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY------------ 179
P + T +I + +H V +LG ++GS LV+ Y
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 180 -------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
L+C+ +E+A +F+ + RD + W MV G Q G +AL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+VFRRM EG+ + ++T +L+A + + G+ +H + + Y+ V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + + A +F M ++I SW +++ + Q + +R F M G +PD T
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+V+ +C++LA+L G Q H +V+GL + + ++NAL+ +Y KCGS+ DA
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRY--------ITVSNALVTLYGKCGSIEDAHR 435
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F +MS D SW ++ GY G+ KE +D+F M LKPD VTF+GVLSACS +G
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL 495
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +G ++ M+ +G+VP +HYTC+ID+ R+G+ EA E MP+ + W TLL
Sbjct: 496 VEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
++ RL GN ++ + AA+ + + +P + +YVL+ +++ A G++ EV +R MR + V+K
Sbjct: 556 SSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKK 615
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSWI+ K+ +H F + D+SHP + IY +L L +++ E G
Sbjct: 616 EPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEG 659
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 9/283 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C L++G++IH+Y+ RT D+ ++L++MYSKC ++ A VF ++C N
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-N 343
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMI G+ N + + + F+ M+ G+ PD +T +I C ++ ++ E + H
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L GL + + +ALV Y KC +E+A ++F+E+ D V W A+V GYAQ G+ +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPV---MN 274
+++F +M G+ T GVLSA G + G M D G VP+
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG---CDYFDSMQKDHGIVPIDDHYT 520
Query: 275 ALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGN 316
+ID+Y + EA E I +M D F W ++++ GN
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 314/591 (53%), Gaps = 14/591 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGII-DSPLSITSLINMYSKCCQMKYALFVFNNL 93
CIAS C L+ + H +LR + D+ L L + + +Y + VF+
Sbjct: 9 CIASGLKC-----LKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKT 63
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
N F YN MI G S D + + M + ++PD +TF ++K C +
Sbjct: 64 PTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLG 123
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
IH LVFK G D DV++ + +V Y KC F+ +A KVF+++ +++VV W M+ G +
Sbjct: 124 VMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEF 183
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G+F +A+++FR + + G+ F + VL A +G ++GR + + + G V V
Sbjct: 184 GKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVA 243
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+L+DMY K + EA +F+ M EKDI W++++ + G + LF M +
Sbjct: 244 TSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVR 303
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD L +C+ L AL G G + N + +L+D Y KCG
Sbjct: 304 PDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNP--------VLGTSLIDFYAKCG 355
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
SM +A V+ M +KD +N +I G M GQ A +F M + + P+E TFVG+L
Sbjct: 356 SMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLC 415
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
C+H+G + GR + M + V PTIEHY C++D+L RAG L+EA+ L MP +AN
Sbjct: 416 GCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANV 475
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+VW +LL RLH T LAE +++ +LEP + G+YVL+SNIY A +++E IR T+
Sbjct: 476 IVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTV 535
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++ ++K PG SW+E+ +H F+ D SHP ++ IY +L SL L+E G
Sbjct: 536 NEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAG 586
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 202/652 (30%), Positives = 340/652 (52%), Gaps = 36/652 (5%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
++S+ HP + + L C +L +G+++H +++ G P+ + L+ Y
Sbjct: 91 ASSASQDLIVHPIS-----SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFY 145
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
S + A + N S + F +N +IS + N F K L + M + G+ PD +T+
Sbjct: 146 SAFNLLVDAHVITEN-SNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTY 204
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
P ++K C + + + K++H ++ +Y + N EA ++F +
Sbjct: 205 PSVLKACGEELDLGFGKEVHE-----SINASLYASMGMWN---------EAFELFGSMWA 250
Query: 198 RDV----VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
D+ ++WN + GY + G + ALE+ +M K G + + L A +G K
Sbjct: 251 EDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKL 310
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +H ++ + V NALI MY + K + A +F++ME K + +WNSI++
Sbjct: 311 GKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCH 370
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
+ L ML G +P+ VT ++VLP C+ +A L HG++ H Y+ K
Sbjct: 371 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFK---- 426
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D + + NAL+DMY + G + +A+ VF + ++D ++ MI GYGM G+G+ AL +F
Sbjct: 427 ---DHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLF 483
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M ++KPD +T + VLSACSHSG ++QG+ M S YG+ P +EH+ C+ D+ GR
Sbjct: 484 EEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGR 543
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AG LN+A E+ MP + P +W TL+ A R+H NT++ E AA+++ +++P + G YVL+
Sbjct: 544 AGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLI 603
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
+N+Y A G + ++ +R MR VRK PGC+W+++ G F+ D S+ A IY L
Sbjct: 604 ANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLL 663
Query: 614 HSLTARLREHGDCCAGTLFDSDSTASGFEK----HRLYLEEVIAKGSL-DFD 660
LT ++E G + D T+ F + R L + GS DF+
Sbjct: 664 EGLTMVMKEAGYISSEDFGSGDETSGEFNEEMKLRRSMLSSIETAGSFKDFE 715
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 187/597 (31%), Positives = 313/597 (52%), Gaps = 20/597 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + + Q +H ++++TG D+ ++ L+N+Y+KC M+ A VF N+ N
Sbjct: 71 LQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP-RRN 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + ++ GF N + F M G P YT ++ C + ++ + H
Sbjct: 130 VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHA 189
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K LD D +GSAL + Y KC +E+ALK F + ++V+ W + V+ G K
Sbjct: 190 YIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVK 249
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +F M E I + FT+T LS + + G V + +K GY+S + V N+L+
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ-----------CGNHDGTLRLFDRM 327
+Y K + EA F M++ + +WN+++ H Q C L++F ++
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +PDL T S+VL CS + A+ G QIH + G + DV ++ +L+
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGF--------LSDVIVSTSLIS 421
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS+ A F +MS + + +W MI G+ G ++AL +F M A ++P+ VT
Sbjct: 422 MYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVT 481
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVLSACSH+G +SQ + +M+ +Y + P ++HY C++DM R G+L +A M
Sbjct: 482 FVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKM 541
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E + +W +A R HGN +L A++++ L+P YVL+ N+Y++ ++++V
Sbjct: 542 NYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVS 601
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M + V K SWI +KD +++F ++D++HP + I L L A+ + G
Sbjct: 602 RVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLG 658
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 27/414 (6%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
+K + L++ C D + + +HG V K G + ++ S LVN Y KC ME+A +VF
Sbjct: 63 EKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVF 122
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
E +P R+VV W ++ G+ Q + A+ VF+ M G + S +T++ VL A + K
Sbjct: 123 ENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLK 182
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G H ++K D V +AL +Y K + +AL+ F + EK++ SW S ++
Sbjct: 183 LGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSA-- 240
Query: 313 QCGNHDGT---LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
CG++ LRLF M+S +P+ T ++ L C + +L G Q+ + G
Sbjct: 241 -CGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYES 299
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM------D 423
N + + N+L+ +Y K G + +A F +M + +WN MI G+ D
Sbjct: 300 N--------LRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKD 351
Query: 424 G-----QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
+G EAL +FS + ++ +KPD T VLS CS + QG + + + G +
Sbjct: 352 NLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQ-IHAQTIKTGFL 410
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ T +I M + G + A + L M + W +++ HG + A
Sbjct: 411 SDVIVSTSLISMYNKCGSIERASKAFLEMSTRTM-IAWTSMITGFSQHGMSQQA 463
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 23 NQTFNHP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
NQ+ P FTL++ L +C+ +++G++IH+ ++TG + + TSLI+MY+KC
Sbjct: 370 NQSGMKPDLFTLSSV---LSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKC 426
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
++ A F +S + + +MI+GF + + + L F M GV P+ TF +
Sbjct: 427 GSIERASKAFLEMSTR-TMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGV 485
Query: 141 IKCCCD---VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
+ C V L +I +K+ +D Y +V+ +++ +E+AL +++
Sbjct: 486 LSACSHAGMVSQALNYFEIMQKKYKIKPVMDHY--ECMVDMFVRLGRLEQALNFIKKMNY 543
Query: 198 R-DVVLWNAMVNG 209
+W+ + G
Sbjct: 544 EPSEFIWSNFIAG 556
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 194/554 (35%), Positives = 316/554 (57%), Gaps = 11/554 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+L+NMY K + A VF+ + N ++ AM+SG+ + + + + F M Q
Sbjct: 162 TALLNMYCKLGAVSDAKRVFDGM-LHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCP 220
Query: 131 L-PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
L +++ ++ + +L ++HGLV K GL V + ++LV Y K + M+ A+
Sbjct: 221 LEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAM 280
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+VF R+ + W+AM+ GYAQ GE + A +F +M G + FT GVL+A MG
Sbjct: 281 RVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMG 340
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIM 308
G+ H ++VK+G+++ V V +AL+DMY K C+G+A + F ++ + D+ W +++
Sbjct: 341 ALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMI 400
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
T H Q G H+ L L+ RM G P +T ++VL AC+ LAAL G+Q+H I+ +
Sbjct: 401 TGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFS 460
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
GS + AL MY+KCG++ D+ +VF +M +DV SWN +I + G+G +
Sbjct: 461 LGGS--------VGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSD 512
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
ALDMF M PD +TF+ +LSACSH G + +G + M Y ++PT++HY C++
Sbjct: 513 ALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMV 572
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+L RAGQL EA + ++ + +WR +L A R + D+ A +++ +L
Sbjct: 573 DILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSS 632
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
Y+L+SNIY A K+ +V +RH MR + V K+ GCSW+EL + +H F+ ++ HPEA++
Sbjct: 633 AYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVELYNRVHVFVVGEQQHPEAEN 692
Query: 609 IYAELHSLTARLRE 622
I EL L +++
Sbjct: 693 INVELIRLAKHMKD 706
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 181/396 (45%), Gaps = 20/396 (5%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTY--LKCQFMEEALKVFEELP--LRDVVLWNAMVNG 209
+ +HG K G + ++L+ Y L + A VF ++P LRDV WN+++N
Sbjct: 34 EALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNP 93
Query: 210 YAQIGEFHKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
++ AL FR M S E + S + +A + G V H + K+
Sbjct: 94 LSRHHPV-SALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSS 152
Query: 268 SG---VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G V V AL++MY K V +A +F+ M ++ SW ++++ + + LF
Sbjct: 153 CGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELF 212
Query: 325 DRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
ML + + + VL A S L+ G Q+HG ++ +GL + V + N
Sbjct: 213 RLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGL--------VGFVSVEN 264
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+L+ MY K M A VF +++ +W+ MI GY +G+ A MF M + P
Sbjct: 265 SLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTP 324
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
E TFVGVL+ACS G L G++ LM + G + + ++DM + G + +A +
Sbjct: 325 TEFTFVGVLNACSDMGALVVGKQTHCLM-VKLGFETQVYVKSALVDMYAKCGCIGDAKDG 383
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
+ + + V+W ++ +G + A + R+
Sbjct: 384 FHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRM 419
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 19/290 (6%)
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCVGEALEIFEMMEE--KDIFSWNSI 307
+ G +HG +K G S PV N+LI Y +G A +F + +D+ SWNS+
Sbjct: 31 RTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSL 90
Query: 308 MTVHEQCGNHD-GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR--QIHGYIVV 364
+ + +H L F M+S+ P+ V S P A R V
Sbjct: 91 LNPLSR--HHPVSALSHFRSMMSS---PEAVLPS---PHSFAAAFTAAARVPSASAGAVT 142
Query: 365 NGLA-KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+ LA K S ++VF++ AL++MY K G++ DA+ VF M ++ SW M+ GY
Sbjct: 143 HALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATG 202
Query: 424 GQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+EA ++F M + L+ +E VLSA S L G + L+ + G+V +
Sbjct: 203 KCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLV-LKDGLVGFVS 261
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ M +A ++ A + E N + W ++ +G + A
Sbjct: 262 VENSLVTMYAKAECMDAAMRV-FGSSKERNSITWSAMITGYAQNGEANCA 310
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 318/571 (55%), Gaps = 14/571 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S+ +R G+ D+ ++L+++Y+KC ++ A VF+ + N+ ++NA+I+G+
Sbjct: 110 GAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVR-NIVSWNAIIAGYT 168
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + ++ F M+++G +PD TF L+ ++++HG + K G L +
Sbjct: 169 DSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLV 228
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE- 229
+A + Y +C + ++ K+F+ + RD++ WN+M+ YA G +A+ F RM +E
Sbjct: 229 ALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRES 288
Query: 230 GIWMSRFTVTGVLSALIMMGFF-KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
GI ++ T +S G + GR +H +V+K G + PV NA+I MY + C+
Sbjct: 289 GIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCM 348
Query: 287 GE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
E A F + KD SWNS++T + G L+ F M + + D S L +
Sbjct: 349 MEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRS 408
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS LA L GRQ+H +V +G A N F++++L+ MY+KCG + DA+ F +
Sbjct: 409 CSDLAVLRLGRQVHSLVVQSGFASND--------FVSSSLIFMYSKCGVLGDARKSFEEA 460
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K WN M+ GY GQ + D+F+ M + ++ D VTFV +++A SH G + +G
Sbjct: 461 DKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGS 520
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L ME+RY + +EHY C +D+ GRAGQL++A EL +MP + + +VW TLL A R+
Sbjct: 521 EILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRI 580
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A+ +F EP YVL+S++Y G + + ++ MR + + K PG S
Sbjct: 581 HGNMELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWS 640
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
WIE+K+ +H+F + DRSHP I+ L L
Sbjct: 641 WIEVKNEVHSFNADDRSHPRMVEIFDMLRML 671
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 19/384 (4%)
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
L K H + K G L T + A +VF+E+P D WN+++
Sbjct: 8 ALAAAKSHATLLKSGASSPTPWNQLL--TAYSATGLAAARRVFDEIPHPDAASWNSLLAA 65
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ G A + R M G+ S F + L + + G + V+ G
Sbjct: 66 HVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADN 125
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +AL+D+Y K +G+A +F+ M ++I SWN+I+ + + LF M
Sbjct: 126 VFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQR 185
Query: 330 AGFQPDLVTFSTVLP--ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD TF+ +L A +LM RQ+HG IV G A + NA +
Sbjct: 186 VGSVPDGTTFAVLLATIAGPRWYSLM--RQLHGKIVKYGSALG--------LVALNAAIT 235
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEV 446
Y++C ++ D++ +F + +D+ SWN M+ Y G EA+ F M E+ ++PD
Sbjct: 236 AYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMY 295
Query: 447 TFVGVLSACSHSGF-LSQGREF--LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+F +S CS G QGR L + GV P + + +AY
Sbjct: 296 SFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNC 355
Query: 504 ALAMPNEANPVVWRTLLAASRLHG 527
++ + + V W ++L HG
Sbjct: 356 FSSLVFK-DAVSWNSMLTGYSHHG 378
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 12/275 (4%)
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H ++K G S P N L+ Y + A +F+ + D SWNS++ H G H
Sbjct: 15 HATLLKSGASSPTP-WNQLLTAY-SATGLAAARRVFDEIPHPDAASWNSLLAAHVAAGAH 72
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
RL M + G + L + + G Q+ + V GLA D
Sbjct: 73 RDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLA--------D 124
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+VF +AL+D+Y KCG + DA+ VF M +++ SWN +I GY + EA+++F M
Sbjct: 125 NVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQ 184
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
PD TF +L+ + + S R+ + +YG + I + L
Sbjct: 185 RVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKI-VKYGSALGLVALNAAITAYSQCDAL 243
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ ++ + + + + W ++L A HG D A
Sbjct: 244 ADSRKIFDGIESR-DLISWNSMLGAYAYHGLDDEA 277
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 332/644 (51%), Gaps = 73/644 (11%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSP-LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT-- 101
+T ++ +H +L+T + P + L+ Y+K ++ A VF+ + +PN+FT
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMP-DPNLFTRN 83
Query: 102 -----------------------------YNAMISGFYSNDFAFKGLDFFNHM-RQLGVL 131
YNA+I+GF S + + + + R+ V
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY------------ 179
P + T +I + +H V +LG ++GS LV+ Y
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 180 -------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
L+C+ +E+A +F+ + RD + W MV G Q G +AL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+VFRRM EG+ + ++T +L+A + + G+ +H + + Y+ V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + + A +F M ++I SW +++ + Q + +R F M G +PD T
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+V+ +C++LA+L G Q H +V+GL + + ++NAL+ +Y KCGS+ DA
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRY--------ITVSNALVTLYGKCGSIEDAHR 435
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F +MS D SW ++ GY G+ KE +D+F M LKPD VTF+GVLSACS +G
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGL 495
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +G ++ M+ +G+VP +HYTC+ID+ R+G+ EA E MP+ + W TLL
Sbjct: 496 VEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
++ RL GN ++ + AA+ + + +P + +YVL+ +++ A G++ EV +R MR + V+K
Sbjct: 556 SSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKK 615
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSWI+ K+ +H F + D+SHP + IY +L L +++ E G
Sbjct: 616 EPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEG 659
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 9/283 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C L++G++IH+Y+ RT D+ ++L++MYSKC ++ A VF ++C N
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-N 343
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMI G+ N + + + F+ M+ G+ PD +T +I C ++ ++ E + H
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L GL + + +ALV Y KC +E+A ++F+E+ D V W A+V GYAQ G+ +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPV---MN 274
+++F +M G+ T GVLSA G + G M D G VP+
Sbjct: 464 TIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKG---CDYFDSMQKDHGIVPIDDHYT 520
Query: 275 ALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGN 316
+ID+Y + EA E I +M D F W ++++ GN
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 294/545 (53%), Gaps = 29/545 (5%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA +F++L P YN++I S+ + L ++ M Q G+ PD T+P +IK
Sbjct: 145 LAYAKTIFHHLQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIK 203
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + +H V K G + D YI S+L++ Y + + A ++F RDVV
Sbjct: 204 ACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVS 263
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV- 261
WNAM++GY + E A VF RM V +I NG + G +
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFDRM--------------VCRDVISWNTMINGYAIVGKID 309
Query: 262 -VKMGYDS----GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
K +D + N+++ + K V +A +F M +D+ SWNS++ + QCG
Sbjct: 310 EAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGK 369
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ L LFD+M + G +P T ++L AC+HL AL G +H YI N + N
Sbjct: 370 PNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNS----- 424
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+ AL+DMY KCG + A VF M KDV +WN +I G + G KEA +F M
Sbjct: 425 ---IVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEM 481
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
EA ++P+++TFV +LSACSH+G + +G++ L M S YG+ P +EHY CVID+L RAG
Sbjct: 482 KEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGF 541
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L EA EL MP E NP LL R+HGN +L E+ +R+ L+P H G Y+L+SNI
Sbjct: 542 LEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNI 601
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y A K+++ +R+ M+ + K PG S IELK +H F++ D SHPE+ IY +L+ +
Sbjct: 602 YAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEI 661
Query: 617 TARLR 621
RL+
Sbjct: 662 HTRLK 666
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 163/320 (50%), Gaps = 9/320 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C + G +H++++++G ++SLI++Y+ + A +F NL +
Sbjct: 202 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLF-NLCSARD 260
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++NAMI G+ + F+ M V D ++ +I V + E K++
Sbjct: 261 VVSWNAMIDGYVKHVEMGHARMVFDRM----VCRDVISWNTMINGYAIVGKIDEAKRL-- 314
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
F + ++ ++++ ++KC +E+A +F E+P RDVV WN+M+ YAQ G+ ++
Sbjct: 315 --FDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNE 372
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F +M G+ + TV +LSA +G G +H + + V AL+D
Sbjct: 373 ALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVD 432
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + A ++F ME KD+ +WN+I+ GN +LF M AG +P+ +T
Sbjct: 433 MYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDIT 492
Query: 339 FSTVLPACSHLAALMHGRQI 358
F +L ACSH + G+++
Sbjct: 493 FVAILSACSHAGMVDEGQKL 512
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T AT ++ L CAH L KG +H+Y+ I + + T+L++MY+KC ++ A VF
Sbjct: 388 TEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVF 447
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + + +V +N +I+G + + F M++ GV P+ TF ++ C V
Sbjct: 448 NAMESK-DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506
Query: 151 LEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD------VVLW 203
E +K + + G++ V +++ + F+EEA+++ +P+ +L
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 566
Query: 204 NAMVNGYAQIGEF 216
++G ++GE
Sbjct: 567 GCRIHGNFELGEM 579
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 319/614 (51%), Gaps = 45/614 (7%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
++L +G+EIH+ + +G+ +L+ MY++ + A +F +L ++NA+
Sbjct: 121 SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET-SWNAV 179
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I + L F M+ V P+ T+ +I + E +KIH + G
Sbjct: 180 ILAHSQSGDWSGALRIFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + +AL+N Y KC EA +VF+++ RD+V WN M+ Y G+FH+ALE++++
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--- 282
+ EG ++ T +L A + GR+VH +++ G DS V V AL++MY K
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGS 358
Query: 283 -------------------------------GKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GK +A ++F+ + +D SWN+++T +
Sbjct: 359 LEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTY 418
Query: 312 EQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G +++F M +AG +PD VTF VL AC+ L L + +H I + L N
Sbjct: 419 VQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESN 478
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
V + N L++MY +CGS+ +A+ +F +K V SW M+ + G+ EAL
Sbjct: 479 --------VVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEAL 530
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
D+F M +KPD+VT+ +L C+H G L QG + M + + PT +H+ ++D+
Sbjct: 531 DLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDL 590
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGR+G+L +A EL +MP E +PV W T L A R+HG +L E AA+RV++L+P Y
Sbjct: 591 LGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPY 650
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
+ MSNIY A G +E+V +R M ++ ++K PG S+IE+ LH F S + HP I
Sbjct: 651 IAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEIC 710
Query: 611 AELHSLTARLREHG 624
EL L +R G
Sbjct: 711 EELTRLHGLMRAAG 724
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 254/526 (48%), Gaps = 56/526 (10%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC-EPNVF 100
C+ ++ +G+ +H + + + +LI+MY KC + A VF ++ + NV
Sbjct: 17 CSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVV 76
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++NAMI+ + N + + L + M G+ D TF ++ C ++ + ++IH V
Sbjct: 77 SWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRV 133
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
F GLD + +ALV Y + + +A ++F+ L RD WNA++ ++Q G++ AL
Sbjct: 134 FYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGAL 193
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F+ M K + + T V+S GR +H +V G+D+ + V ALI+MY
Sbjct: 194 RIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMY 252
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
GK EA E+F+ M+++D+ SWN ++ + G+ L L+ ++ GF+ TF
Sbjct: 253 GKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFV 312
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++L ACS + AL GR +H +I+ GL +V + AL++MY KCGS+ +A+
Sbjct: 313 SILGACSSVKALAQGRLVHSHILERGLDS--------EVAVATALVNMYAKCGSLEEARK 364
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKE-------------------------------- 428
VF M +D +W+ +I Y +G GK+
Sbjct: 365 VFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCA 424
Query: 429 --ALDMFSCMC-EAKLKPDEVTFVGVLSACSHSGFLSQGREF---LPLMESRYGVVPTIE 482
A+ +F M A LKPD VTF+ VL AC+ G LS+ + + E VV T
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVT-- 482
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+I+M R G L EA L A E V W ++AA +G
Sbjct: 483 --NTLINMYARCGSLEEAERL-FAAAKEKTVVSWTAMVAAFSQYGR 525
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/432 (32%), Positives = 219/432 (50%), Gaps = 16/432 (3%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD TF ++ C V+E + +H + + D +G+AL++ Y KC + +A V
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 192 FEELPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
FE + R +VV WNAM+ YAQ G +AL ++ RM+ +G+ T VL A +
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
GR +H V G DS + NAL+ MY + VG+A +F+ ++ +D SWN+++
Sbjct: 125 ---QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
H Q G+ G LR+F M +P+ T+ V+ S L GR+IH IV NG
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
D+ + AL++MY KCGS +A+ VF KM K+D+ SWN+MI Y ++G EA
Sbjct: 241 --------DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEA 292
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
L+++ + K + TFV +L ACS L+QGR + R G+ + T +++
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVN 351
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
M + G L EA ++ AM N + V W TL+ A +G A A + +L +
Sbjct: 352 MYAKCGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTIS 410
Query: 550 YVLMSNIYVAGG 561
+ M YV G
Sbjct: 411 WNAMITTYVQNG 422
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 147/317 (46%), Gaps = 38/317 (11%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFV 89
T AT ++ L C+ L +G+ +HS++L G+ DS +++ T+L+NMY+KC ++ A V
Sbjct: 307 TKATFVSILGACSSVKALAQGRLVHSHILERGL-DSEVAVATALVNMYAKCGSLEEARKV 365
Query: 90 FNNLSCEPNV---------------------------------FTYNAMISGFYSNDFAF 116
FN + V ++NAMI+ + N A
Sbjct: 366 FNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAV 425
Query: 117 KGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ F M G+ PD TF +++ C + + EVK +H + + L+ +V + + L
Sbjct: 426 AAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTL 485
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+N Y +C +EEA ++F + VV W AMV ++Q G + +AL++F+ M EG+
Sbjct: 486 INMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDD 545
Query: 236 FTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T T +L G + G R + A++D+ G+ + +A E+ E
Sbjct: 546 VTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLE 605
Query: 295 MME-EKDIFSWNSIMTV 310
M E D +W + +T
Sbjct: 606 SMPFEPDPVAWMTFLTA 622
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
QPD VTF TVL +CS ++ GR +H I + + D + NAL+ MY KC
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFER--------DTMVGNALISMYGKC 55
Query: 393 GSMRDAQMVFTKMS--KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
S+ DA+ VF M +++V SWN MI Y +G EAL ++ M L D VTFV
Sbjct: 56 DSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVS 115
Query: 451 VLSACSHSGFLSQGREF 467
VL ACS L+QGRE
Sbjct: 116 VLGACSS---LAQGREI 129
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 285/490 (58%), Gaps = 9/490 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
Y + L++ C D A+ K++H + LG+ + + + LV+ Y + A +F++
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P +++ LWN ++ GYA G A+ ++ +M G+ FT+ VL A + G
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R +H V+K G++ + V ALIDMY K CV +A +F+ + +D WNS++ + Q
Sbjct: 168 RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G+ D ++ L M + G +P T TV+ + + +A L +GR+IHG+ +G N K
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK 287
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
AL+DMY KCGS++ A +F ++ +K V SWN +I GY M G ALD+F
Sbjct: 288 --------TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFD 339
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + +PD +TFVGVL+ACS L +GR LM YG+ PT++HYTC+ID+LG
Sbjct: 340 KM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC 398
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
GQL+EAY+L M + + VW LL + ++HGN +LAE+A +++ +LEP GNYV+++
Sbjct: 399 GQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILA 458
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
N+Y GK+E V +R M + ++KN CSWIE+K+ ++ F++ D SH + +IYAEL
Sbjct: 459 NMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELK 518
Query: 615 SLTARLREHG 624
L + E G
Sbjct: 519 RLEGLMHEAG 528
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 222/446 (49%), Gaps = 25/446 (5%)
Query: 10 PFSSCFNFS-----TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
PFS F S T+S + P T + LQ C L G+++H+ GI
Sbjct: 20 PFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIA 79
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
+ T L+++Y+ + A +F+ + + N+F +N +I G+ N + ++
Sbjct: 80 YNQDLATKLVHLYAVSNSLLNARNLFDKIP-KQNLFLWNVLIRGYAWNGPHDNAIILYHK 138
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M G+ PD +T P ++K C + A+ E + IH V K G + D+++G+AL++ Y KC
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGC 198
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ +A +VF+++ +RD VLWN+M+ YAQ G +++ + R M+ G+ + T+ V+S+
Sbjct: 199 VMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISS 258
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ GR +HG + G+ S V ALIDMY K V AL +FE + EK + SW
Sbjct: 259 SADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSW 318
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV- 363
N+I+T + G G L LFD+M +PD +TF VL ACS L GR ++ +V
Sbjct: 319 NAIITGYAMHGLAVGALDLFDKMRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVR 377
Query: 364 ---VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+ ++ +C ++D+ CG + +A + MS K D W ++
Sbjct: 378 DYGITPTVQHYTC-----------MIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNS 426
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDE 445
+ G + A + E L+PD+
Sbjct: 427 CKIHGNVELAELALEKLIE--LEPDD 450
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 286/485 (58%), Gaps = 9/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C + V + +HG K + + L++ Y KC ++ A+ VF+ + +R
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV W +++ YA+ G +A+ +F M +EG+ FT+T VL A G +NG+ VH
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ + S + V NAL+DMY K + +A +F M KDI SWN+++ + + +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF M+ +PD T + +LPAC+ LA+L G+++HG+I+ NG D
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGF--------FSDQ 234
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ NAL+DMY KCG A+++F + KD+ +W +MI GYGM G G A+ F+ M +A
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++PDEV+F+ +L ACSHSG L +G F +M+ V P +EHY C++D+L R+G+L
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+ +MP E + +W LL+ R+H + LAE A+ VF+LEP + G YVL++N Y
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAE 414
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
K+EEV +R + ++ ++KNPGCSWIE+K +H F++ + SHP+AK I L L ++
Sbjct: 415 AEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSK 474
Query: 620 LREHG 624
++E G
Sbjct: 475 MKEEG 479
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/309 (32%), Positives = 151/309 (48%), Gaps = 13/309 (4%)
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ +L A G GR VHG VK N L+DMY K + A+ +F++M
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+ + +W S++ + + G D +RLF M G PD+ T +TVL AC+ +L +G+
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
+H YI N + N +F+ NALMDMY KCGSM DA VF +M KD+ SWN MI
Sbjct: 121 VHNYIRENDMQSN--------IFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMI 172
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY + EAL +F M ++KPD T +L AC+ L +G+E + R G
Sbjct: 173 GGYSKNSLPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHI-LRNGF 230
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH--GNTDLAEIA 535
+ ++DM + G A L +P + + + W ++A +H GN +
Sbjct: 231 FSDQQVANALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAGYGMHGFGNNAITTFN 289
Query: 536 AQRVFQLEP 544
R +EP
Sbjct: 290 EMRQAGIEP 298
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 171/320 (53%), Gaps = 2/320 (0%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ LQ CA+ ++ G+ +H ++ + +L++MY+KC + A+ VF+ +S
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+ ++I+ + + + + F+ M + GV PD +T ++ C ++ K
Sbjct: 62 R-TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H + + + ++++ +AL++ Y KC ME+A VF E+P++D++ WN M+ GY++
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
++AL +F M E + T+ +L A + G+ VHG +++ G+ S V NA
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K A +F+M+ KD+ +W ++ + G + + F+ M AG +PD
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299
Query: 336 LVTFSTVLPACSHLAALMHG 355
V+F ++L ACSH L G
Sbjct: 300 EVSFISILYACSHSGLLDEG 319
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 111/225 (49%), Gaps = 5/225 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+ T L CA +L+ G+++H+Y+ + + +L++MY+KC M+ A V
Sbjct: 100 FTITTV---LHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + ++ ++N MI G+ N + L F M L + PD T C++ C + +
Sbjct: 157 FLEMPVK-DIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLAS 214
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + G D + +ALV+ Y+KC A +F+ +P +D++ W M+ G
Sbjct: 215 LDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAG 274
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
Y G + A+ F M + GI + +L A G G
Sbjct: 275 YGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG 319
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 9/183 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T CI L CA +L +G+E+H ++LR G +L++MY KC A +F
Sbjct: 200 TTLACI--LPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLF 257
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + + ++ T+ MI+G+ + F + FN MRQ G+ PD+ +F ++ C +
Sbjct: 258 DMIPTK-DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLL 316
Query: 151 LEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
E + ++ + L+ Y + +V+ + + A K + +P+ D +W A+
Sbjct: 317 DEGWRFFNVMQDECNVKPKLEHY--ACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGAL 374
Query: 207 VNG 209
++G
Sbjct: 375 LSG 377
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 217/624 (34%), Positives = 338/624 (54%), Gaps = 22/624 (3%)
Query: 8 INPFSSCFNFSTS----SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI 63
I+ F+S + T+ + H F T + L+ A+ L+ GQ++HS ML+ G+
Sbjct: 66 ISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGL 125
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY---SNDFAFKGLD 120
++ S ++L++MY+KC ++ VF ++ E N ++N +++ + D AF L
Sbjct: 126 SENVFSGSALLDMYAKCGRVDDGYVVFQSMP-ERNYVSWNTLVASYSRVGDCDMAFWVL- 183
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
+ M GV D T L+ + M ++H + K GL+L + +A + Y
Sbjct: 184 --SCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241
Query: 181 KCQFMEEALKVFEELPL-RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
+C +++A +VF+ L RD+V WN+M+ Y + A +VF M G +T T
Sbjct: 242 ECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYT 301
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCVGEALEIFEMME 297
G++ A + G+ +HG+V+K G D+ VPV NALI MY + +C+ +AL IF M+
Sbjct: 302 GIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMD 361
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
KD +WNSI+ + Q G + LRLF +M + D TFS V+ +CS LA L G+Q
Sbjct: 362 LKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQ 421
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
H + G N ++ ++L+ MY+KCG + DA+ F SK + WN +I
Sbjct: 422 FHVLALKVGFDTNS--------YVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSII 473
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GY GQG ALD+F M E K+K D +TFV VL+ACSH+G + +G F+ MES +G+
Sbjct: 474 FGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGI 533
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P EHY C ID+ GRAG L +A L MP E + +V +TLL A R G+ +LA A+
Sbjct: 534 PPRQEHYACAIDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAK 593
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
+ +LEP YV++S +Y + E + MR++ V+K PG SWIE+K+ +H F
Sbjct: 594 ILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRMMRERGVKKVPGWSWIEVKNNVHAFN 653
Query: 598 SSDRSHPEAKSIYAELHSLTARLR 621
+ D SHP+ + IY L L ++
Sbjct: 654 AEDHSHPQCEEIYILLQQLNEGIK 677
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 239/481 (49%), Gaps = 14/481 (2%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H ++ G I P + +LI Y+KC ++ A VF+ + V ++NA+IS F S+
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTV-SWNAIISAFASSGD 74
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
MR+ D TF ++K V + +++H ++ K+GL +V+ GSA
Sbjct: 75 LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSA 134
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
L++ Y KC +++ VF+ +P R+ V WN +V Y+++G+ A V M EG+ +
Sbjct: 135 LLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEID 194
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
TV+ +L+ L F+K +H +VK G + V NA I Y + + +A +F+
Sbjct: 195 DGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFD 254
Query: 295 -MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ +D+ +WNS++ + D ++F M + GF+PD T++ ++ ACS
Sbjct: 255 GAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKT 314
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS--MRDAQMVFTKMSKKDVA 411
G+ +HG ++ GL + V ++NAL+ MY + M DA +F M KD
Sbjct: 315 CGKCLHGLVIKRGLD--------NSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCC 366
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+WN ++ GY G ++AL +F M ++ D TF V+ +CS L G++F ++
Sbjct: 367 TWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQF-HVL 425
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+ G + +I M + G + +A + + ++ N +VW +++ HG ++
Sbjct: 426 ALKVGFDTNSYVGSSLIFMYSKCGIIEDARK-SFEATSKDNAIVWNSIIFGYAQHGQGNI 484
Query: 532 A 532
A
Sbjct: 485 A 485
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 151/311 (48%), Gaps = 11/311 (3%)
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +L + H KLG D Y + L+ +Y KC + A +VF+E+P RD V WNA++
Sbjct: 7 LTLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAII 66
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ +A G+ ++ M + T +L + +G K G+ +H +++K+G
Sbjct: 67 SAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLS 126
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V +AL+DMY K V + +F+ M E++ SWN+++ + + G+ D + M
Sbjct: 127 ENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCM 186
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK-NGSCKDIDDVFMNNALM 386
G + D T S +L + Q+H IV +GL N C NA +
Sbjct: 187 ELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVC---------NATI 237
Query: 387 DMYTKCGSMRDAQMVFT-KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
Y++C S++DA+ VF + +D+ +WN M+ Y M + A +F M +PD
Sbjct: 238 TAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDA 297
Query: 446 VTFVGVLSACS 456
T+ G++ ACS
Sbjct: 298 YTYTGIVGACS 308
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 353 MHGRQIHGYIVVNGLA-KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+H + G I + A K GS I D + N L+ Y KC + A VF +M +D
Sbjct: 4 LHSLTLLGLIATHCRAIKLGS---IADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTV 60
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN +I + G + M + D TF +L ++ G L G++ +M
Sbjct: 61 SWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVM 120
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+ G+ + + ++DM + G++++ Y + +MP E N V W TL+A+ G+ D+
Sbjct: 121 -LKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMP-ERNYVSWNTLVASYSRVGDCDM 178
Query: 532 A 532
A
Sbjct: 179 A 179
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 201/602 (33%), Positives = 330/602 (54%), Gaps = 16/602 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA---LFVF 90
T +++L C + + G+EIH+ +L++ +LI MY++C +M A L +
Sbjct: 266 TIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLM 325
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
NN +V T+N++I G+ N + L FF M G PD+ + +I + +
Sbjct: 326 NN----ADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNL 381
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
L ++H V K G D ++ +G+ L++ Y KC + F + +D++ W ++ GY
Sbjct: 382 LAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGY 441
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A +AL++FR ++K+ + + + +L A ++ + +H +++ G V
Sbjct: 442 ALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV 501
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ N L+D+YGK + +G A +FE ++ KD+ SW S+++ GN + + LF RM
Sbjct: 502 -IQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAET 560
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G D V +L A + L+AL GR+IHGY++ G GS + A++DMY
Sbjct: 561 GLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGS--------IAVAVVDMYA 612
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
CG ++ A+ VF ++ +K + + MI YGM G GK ++++F+ M + PD ++F+
Sbjct: 613 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLA 672
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L ACSH+G L +GR FL +ME Y + P EHY C++DMLGRA + EA+E M E
Sbjct: 673 LLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 732
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
VW LLAA R H ++ EIAAQR+ +LEP + GN VL+SN++ G++ +V +R
Sbjct: 733 PTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 792
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGT 630
M+ + K+PGCSWIE+ +H F + D+SHPE K IY +L +T +L A T
Sbjct: 793 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGYLADT 852
Query: 631 LF 632
F
Sbjct: 853 KF 854
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 233/445 (52%), Gaps = 13/445 (2%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + + F +NA+I + SN L + +MR GV D Y+FP L+K C +
Sbjct: 118 VFDEMR-DRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLR 176
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ ++H ++ KLG + +I +ALV+ Y K + A ++F+ + D VLWN+++
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ Y+ G+ + L++FR M G + +T+ L+A + K G+ +H V+K +
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V NALI MY + + EA I +M D+ +WNS++ + Q + L+ F M
Sbjct: 297 FEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDM 356
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
++AG +PD V+ ++V+ A L+ L+ G ++H Y++ +G N + + N L+D
Sbjct: 357 IAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSN--------LLVGNTLID 408
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+KC F M +KD+ SW +I GY ++ EAL +F + + +++ DE+
Sbjct: 409 MYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMM 468
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+L ACS + +E + R G++ T+ ++D+ G+ + A + ++
Sbjct: 469 LGSILRACSVLKSMLIVKE-IHCHILRKGLIDTVIQNE-LVDVYGKCRNMGYASRVFESI 526
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
+ + V W +++++S L+GN + A
Sbjct: 527 KGK-DVVSWTSMISSSALNGNENEA 550
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 223/472 (47%), Gaps = 10/472 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L + L+ C +++ G E+H +++ G + + +L++MY+K + A
Sbjct: 159 PLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKR 218
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +N+++S + ++ + + L F M+ G + YT + C
Sbjct: 219 LFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFS 278
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
K+IH V K +VY+ +AL+ Y +C M EA ++ + DVV WN+++
Sbjct: 279 YAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIK 338
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY Q + +AL+ F M G ++T V++A + G +H V+K G+DS
Sbjct: 339 GYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDS 398
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N LIDMY K F MM EKD+ SW +I+ + H L+LF +
Sbjct: 399 NLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVA 458
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ D + ++L ACS L +++ ++IH +I+ GL D + N L+D+
Sbjct: 459 KKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLI---------DTVIQNELVDV 509
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC +M A VF + KDV SW MI ++G EA+++F M E L D V
Sbjct: 510 YGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVAL 569
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ +LSA + L +GRE + R G V+DM G L A
Sbjct: 570 LCILSAAASLSALKKGREIHGYL-LRKGFCLEGSIAVAVVDMYACCGDLQSA 620
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 167/338 (49%), Gaps = 11/338 (3%)
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
KVF+E+ R WNA++ Y GE AL ++R M EG+ + ++ +L A +
Sbjct: 117 KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLR 176
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIM 308
++G +H ++VK+G++S ++NAL+ MY K + A +F+ +EK D WNSI+
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + G TL+LF M G + T + L AC + G++IH ++ + +
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
+V++ NAL+ MY +CG M +A + M+ DV +WN +I GY + KE
Sbjct: 297 F--------EVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKE 348
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL F M A KPDEV+ V++A L G E + ++G + +I
Sbjct: 349 ALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYV-IKHGWDSNLLVGNTLI 407
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
DM + L A M +E + + W T++A L+
Sbjct: 408 DMYSKC-NLTCYMGRAFLMMHEKDLISWTTIIAGYALN 444
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 348/670 (51%), Gaps = 57/670 (8%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
+P L T L+ C Q +L G+ +H+ ++ I S +YSKC + A
Sbjct: 4 TYPLQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNA 63
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSND--------------------------FAFKG-- 118
F+ L+ PNVF+YN +I+ + + +A +G
Sbjct: 64 QTSFH-LTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGEC 122
Query: 119 ---LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
L F +R+L + D +T +I C D + + V+++H V G D + +A+
Sbjct: 123 GPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGL--VRQLHCFVVVCGHDCYASVNNAV 180
Query: 176 VNTYLKCQFMEEALKVFEELPL---RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ Y + F+ EA +VF E+ RD V WNAM+ Q E +A+ +FR M + G+
Sbjct: 181 LACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLK 240
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE- 291
+ FT+ VL+A + GR HG+++K G+ V + LID+Y K C G +E
Sbjct: 241 VDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSK--CAGSMVEC 298
Query: 292 --IFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+FE + D+ WN++++ ++E + DG L F M GF+PD +F V AC
Sbjct: 299 RKVFEEITAPDLVLWNTMISGFSLYEDL-SEDG-LWCFREMQRNGFRPDDCSFVCVTSAC 356
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S+L++ G+Q+H + + + N V +NNAL+ MY+KCG++ DA+ VF M
Sbjct: 357 SNLSSPSLGKQVHALAIKSDVPYN-------RVSVNNALVAMYSKCGNVHDARRVFDTMP 409
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+ + S N MI GY G E+L +F M E + P+ +TF+ VLSAC H+G + +G++
Sbjct: 410 EHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQK 469
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ +M+ R+ + P EHY+C+ID+LGRAG+L EA + MP + W TLL A R H
Sbjct: 470 YFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKH 529
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
GN +LA AA +LEP + YV++SN+Y + ++EE ++ MR++ V+K PGCSW
Sbjct: 530 GNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSW 589
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DCCAGTLFDSDSTASGFEK 643
IE+ +H F++ D SHP K I+ + + ++++ G D + D + E+
Sbjct: 590 IEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERER 649
Query: 644 HRLYLEEVIA 653
LY E +A
Sbjct: 650 RLLYHSEKLA 659
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 328/601 (54%), Gaps = 9/601 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+T N ++ +L C + G+++H ++ G D P TSL+ MY KC +
Sbjct: 233 KTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMI 292
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A VFN + + + +NA+IS + N +A+ L + M+ VL D +T ++
Sbjct: 293 ESAEKVFNEVP-DKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTS 351
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
+ IH + K L + I SAL+ Y K A +F + RDVV W
Sbjct: 352 SSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAW 411
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
++++G+ Q ++ +AL+ FR M + + + ++SA + G +HG V+K
Sbjct: 412 GSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIK 471
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G V V ++L+DMY K A IF M K++ +WNSI++ + + D ++ L
Sbjct: 472 SGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINL 531
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F ++L PD V+F++VL A S +AAL+ G+ +HGY+V + D+ + N
Sbjct: 532 FSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPF--------DLQVEN 583
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L+DMY KCG ++ AQ +F ++S+K++ +WN MI GYG G+ +A+++F M + +KP
Sbjct: 584 TLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKP 643
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D+VTF+ +LS+C+HSG + +G +M+ ++G+ P +EHY ++D+ GRAG L +AY
Sbjct: 644 DDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSF 703
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP E + +W +LL + ++H N +L E+ A ++ +EP NYV + N+Y +
Sbjct: 704 VKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELW 763
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ ++R +M+++ ++K PGCSWIE+++ + F S D S P IY L SL + +
Sbjct: 764 DRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKK 823
Query: 624 G 624
G
Sbjct: 824 G 824
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 245/484 (50%), Gaps = 10/484 (2%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+ ++G++IHSY++R + P T+LI+ Y KC + A ++F L N+ +N
Sbjct: 151 QSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWN 210
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
MI GF N L+++ + V +F C + C V K++H K+
Sbjct: 211 VMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKV 270
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G + D Y+ ++L+ Y KCQ +E A KVF E+P +++ LWNA+++ Y G + AL ++
Sbjct: 271 GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY 330
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
++M + FT+ VL++ M G + GR++H +VK S + + +AL+ MY K
Sbjct: 331 KQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKF 390
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
A IF M+E+D+ +W S+++ Q + L F M + +PD ++++
Sbjct: 391 GDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASII 450
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L + G IHG+++ +GL DVF+ ++L+DMY+K G A +F+
Sbjct: 451 SACTGLEKVDLGCTIHGFVIKSGLQL--------DVFVASSLLDMYSKFGFPERAGNIFS 502
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
M K++ +WN +I Y + ++++FS + L PD V+F VL+A S L +
Sbjct: 503 DMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLK 562
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G+ + R + ++ +IDM + G L A + +E N V W +++
Sbjct: 563 GKSVHGYL-VRLWIPFDLQVENTLIDMYIKCGLLKYAQHI-FERISEKNLVAWNSMIGGY 620
Query: 524 RLHG 527
HG
Sbjct: 621 GSHG 624
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 206/423 (48%), Gaps = 33/423 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ CA +NLQ G+ IHS ++ TG+ +SLIN+Y KC A+ VF+ L
Sbjct: 60 LKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGV 119
Query: 97 --PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
+V +N++I G++ +G+ F M+ G E K
Sbjct: 120 SVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG--------------------YKEGK 159
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQI 213
+IH + + L+ D ++ +AL++TY KC EA +F++L R ++V WN M+ G+ +
Sbjct: 160 QIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGEN 219
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G + +LE + E + + + T LSA F G+ VH +K+G++ V
Sbjct: 220 GLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVH 279
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+L+ MYGK + + A ++F + +K+I WN++++ + G LR++ +M
Sbjct: 280 TSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVL 339
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D T VL + S GR IH IV L + + + +AL+ MY+K G
Sbjct: 340 SDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSS--------ITIQSALLTMYSKFG 391
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
A +F+ M ++DV +W +I G+ + + KEALD F M +KPD ++S
Sbjct: 392 DSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIIS 451
Query: 454 ACS 456
AC+
Sbjct: 452 ACT 454
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 187/399 (46%), Gaps = 36/399 (9%)
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
V ++T+P L+K C + + K IH + GL D YI S+L+N Y+KC +A+
Sbjct: 49 VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAV 108
Query: 190 KVFEELP-----LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
KVF++LP + DV +WN++++GY + G+ + + F RM G
Sbjct: 109 KVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG-------------- 154
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFS 303
+K G+ +H +V+ + + ALID Y K EA +F+ ++++ +I +
Sbjct: 155 ------YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVA 208
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN ++ + G + +L + + + +F+ L AC + G+Q+H +
Sbjct: 209 WNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAI 268
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
G DD +++ +L+ MY KC + A+ VF ++ K++ WN +I Y +
Sbjct: 269 KVGFE--------DDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGN 320
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +AL ++ M + D T + VL++ S +G GR + R + +I
Sbjct: 321 GYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKR-PLQSSITI 379
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++ M + G N A + M E + V W ++++
Sbjct: 380 QSALLTMYSKFGDSNYANSIFSTM-KERDVVAWGSVISG 417
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 147/309 (47%), Gaps = 36/309 (11%)
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+E + +K ++ +RFT +L A + + G+ +H ++ G S + ++LI++
Sbjct: 38 IEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINI 97
Query: 280 YGKGKCVGEALEIFEMMEEK-----DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
Y K +A+++F+ + + D+ WNSI+ + + G + + F RM S+G++
Sbjct: 98 YVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGYK- 156
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
G+QIH YIV N L D F+ AL+D Y KCG
Sbjct: 157 -------------------EGKQIHSYIVRNMLNF--------DPFLETALIDTYFKCGR 189
Query: 395 MRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+A+ +F K+ + ++ +WN+MI G+G +G + +L+ + +K +F LS
Sbjct: 190 PTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLS 249
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC F+S G++ + + G +T ++ M G+ + A ++ +P++
Sbjct: 250 ACGQGEFVSFGKQ-VHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIE 308
Query: 514 VVWRTLLAA 522
+W L++A
Sbjct: 309 -LWNALISA 316
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/602 (35%), Positives = 327/602 (54%), Gaps = 32/602 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYM-LRTGIIDSPLSITS-LINMYSKCCQMKYALFVFN 91
T A Q CA +++L +GQ +H +M L D L +T+ ++NMY+KC + YA +F+
Sbjct: 65 TYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFD 124
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-----CD 146
+ E N+ ++ A++SG+ + + + F M + P ++ F +I C C
Sbjct: 125 EMP-EKNIVSWTALVSGYAQHGRSNECFRVFRGML-IWHQPTEFAFASVISACGGDDNCG 182
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK-CQFMEEALKVFEELPLRDVVLWNA 205
+++H L K D VY+G+AL+ Y K C +EA V+E + R++V WN+
Sbjct: 183 -------RQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNS 235
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVVKM 264
M+ G+ G ++ALE+F +M GI R T+ + S L MG + + + +K
Sbjct: 236 MIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKT 295
Query: 265 GYDSGVPVMNALIDMYGK-GKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G+ + V AL+ Y G V + IF E+ +D+ SW I+ + + L
Sbjct: 296 GFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAE-RDPKKALV 354
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+F + L PD FS VL AC+ LA H + +++ G DD+ +
Sbjct: 355 IFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFE--------DDIVLA 406
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NAL+ +CGS+ ++ VF KM +D SWN M+ Y M GQGKEAL +FS M +
Sbjct: 407 NALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQ 463
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD TFV +LSACSH+G +G + M + +G+VP ++HY C++D+LGRAGQ++EA E
Sbjct: 464 PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKE 523
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L MP E + VVW LL + R HG T LA++AA ++ +L+P + YVLMSNI+ G+
Sbjct: 524 LIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMSNIFCTDGR 583
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ E IR M + VRK PG SWIE+ + +H F S + HPE ++I A L L RL++
Sbjct: 584 FNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARLEELVRRLKD 643
Query: 623 HG 624
G
Sbjct: 644 LG 645
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/589 (33%), Positives = 318/589 (53%), Gaps = 15/589 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK-CCQMKYALFVFNNLSCEP 97
L L +L+ ++IH+++L + ++ + L +T N K + Y
Sbjct: 13 LDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSL 72
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ F N +ISG+ S + + + + G +PD YTFP ++K C + EV++ H
Sbjct: 73 SSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFH 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GL D+Y+ + LV+ Y C A KVFE++ +RDVV W +++GY + G F+
Sbjct: 133 SVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFN 192
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +F RM+ E + T +L A +G G+ +HG+V K Y + V NA++
Sbjct: 193 EAISLFLRMNVEP---NVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVL 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K V +A ++F+ M EKDI SW S++ QC + +L LF +M ++GF+PD V
Sbjct: 250 DMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGV 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMR 396
++VL AC+ L L GR +H YI C I DV + L+DMY KCG +
Sbjct: 310 ILTSVLSACASLGLLDCGRWVHEYI---------DCHRIKWDVHIGTTLVDMYAKCGCID 360
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
AQ +F M K++ +WN I G ++G GKEAL F + E+ +P+EVTF+ V +AC
Sbjct: 361 MAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACC 420
Query: 457 HSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
H+G + +GR++ M S Y + P +EHY C++D+L RAG + EA EL MP + +
Sbjct: 421 HNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQI 480
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
LL++ +GN + + + +E G YVL+SN+Y K+ EV +R M+Q
Sbjct: 481 LGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQ 540
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + K PG S I + H F+ D SHP+++ IY L+ L ++ G
Sbjct: 541 KGISKAPGSSIIRVDGMSHEFLVGDNSHPQSEEIYVLLNILANQIYLEG 589
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 4/321 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ CA + + + ++ HS ++TG+ +L+++YS C A VF ++
Sbjct: 114 AVLKSCAKFSGIGEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVR 173
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ +ISG+ + + F M V P+ TF ++ C + + K I
Sbjct: 174 -DVVSWTGLISGYVKTGLFNEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLGKGI 229
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGLVFK ++ + +A+++ Y+KC + +A K+F+E+P +D++ W +M+ G Q
Sbjct: 230 HGLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSP 289
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
++L++F +M G +T VLSA +G GR VH + V + L
Sbjct: 290 RESLDLFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTL 349
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K C+ A IF M K+I +WN+ + G L+ F+ ++ +G +P+
Sbjct: 350 VDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNE 409
Query: 337 VTFSTVLPACSHLAALMHGRQ 357
VTF V AC H + GR+
Sbjct: 410 VTFLAVFTACCHNGLVDEGRK 430
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 137/306 (44%), Gaps = 6/306 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T ++ L C L G+ IH + + + + ++++MY KC + A +F+
Sbjct: 207 VGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKCDSVTDARKMFD 266
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E ++ ++ +MI G + LD F+ M+ G PD ++ C + +
Sbjct: 267 EMP-EKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVLSACASLGLLD 325
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +H + + DV+IG+ LV+ Y KC ++ A ++F +P +++ WNA + G A
Sbjct: 326 CGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLA 385
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +AL+ F + + G + T V +A G GR + Y+ P
Sbjct: 386 INGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNEMTSPLYNLS-P 444
Query: 272 VMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ ++D+ + VGEA+E+ + M D+ ++++ GN T + +
Sbjct: 445 CLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNVGFTQEMLKSL 504
Query: 328 LSAGFQ 333
+ FQ
Sbjct: 505 PNVEFQ 510
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 346/629 (55%), Gaps = 24/629 (3%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML- 59
++ K+ R+ P S + HP +L + L+ A +L+ G+ IH+ ++
Sbjct: 2 LVLKLPRVTPAFSMY----------LPHPCSLKEVVNLLKFSATAKSLRFGKTIHAQLVV 51
Query: 60 --RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
+T I SLIN+YSKC Q K A +F+ + + NV +++A++ G+ +
Sbjct: 52 RNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRM-LQRNVVSWSALMMGYLHKGEVLE 110
Query: 118 GLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
L F ++ L P++Y F ++ CC D V E K+ HG + K GL L Y+ +AL+
Sbjct: 111 VLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALI 170
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y +C ++ A+++ + +P DV +N++++ + G +A +V +RM E +
Sbjct: 171 HMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSV 230
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T VL + + G +H ++K G V V + LID YGK V A + F+ +
Sbjct: 231 TYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
++++ +W +++T + Q G+ + TL LF +M +P+ TF+ +L AC+ L AL +G
Sbjct: 291 RDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGD 350
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
+HG IV++G + + + NAL++MY+K G++ + VF+ M +DV +WN M
Sbjct: 351 LLHGRIVMSGFK--------NHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAM 402
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I GY G GK+AL +F M A P+ VTF+GVLSAC H + +G + + ++
Sbjct: 403 ICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFD 462
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYE-LALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
V P +EHYTC++ +LGRAG L+EA + + + V WRTLL A +H N +L +
Sbjct: 463 VEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQI 522
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
+ V Q++P G Y L+SN++ K++ V+ IR M+++N++K PG SW+++++ H
Sbjct: 523 TETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHV 582
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHG 624
F+S +HPE+ I+ ++ L A ++ G
Sbjct: 583 FVSEGSNHPESTQIFEKVQQLLAMIKPLG 611
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/589 (34%), Positives = 313/589 (53%), Gaps = 47/589 (7%)
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+L + +V ++NAM+SG+ N F + + FN M + ++ L+ +
Sbjct: 132 DLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSI----SWNGLLAAYVHNGRLK 187
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E +++ F+ + ++ + L+ Y+K + +A ++F+ +P+RDV+ WN M++GYA
Sbjct: 188 EARRL----FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYA 243
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR---------------- 255
Q+G+ +A +F + FT T ++S + G R
Sbjct: 244 QVGDLSQAKRLFNESPIRDV----FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNA 299
Query: 256 -----------VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
V+ G + + + N +I YG+ + +A ++F+MM ++D SW
Sbjct: 300 MLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSW 359
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
+I++ + Q G+++ L +F M G + TFS L C+ +AAL G+Q+HG +V
Sbjct: 360 AAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G F+ NAL+ MY KCGS +A VF + +KDV SWN MI GY G
Sbjct: 420 AGFETG--------CFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHG 471
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
G++AL +F M +A +KPDE+T VGVLSACSHSG + +G E+ M+ Y V PT +HY
Sbjct: 472 FGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHY 531
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
TC+ID+LGRAG+L EA L MP + W LL ASR+HGNT+L E AA+ VF++EP
Sbjct: 532 TCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEP 591
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ G YVL+SN+Y A G++ +V +R MR+ V+K G SW+E+++ +HTF D HP
Sbjct: 592 QNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHP 651
Query: 605 EAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
E IYA L L ++R G + L D E Y E +A
Sbjct: 652 EKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLA 700
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 224/513 (43%), Gaps = 85/513 (16%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT--SLINMYSKCCQMKYALFVFNNLSCEPN 98
LC + K + +SY + P +T I+ + + AL VFN++ +
Sbjct: 18 LCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSS 77
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +YNAMISG+ N D F+ M P++
Sbjct: 78 V-SYNAMISGYLRNAKFSLARDLFDKM------PER------------------------ 106
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
D++ + ++ Y++ + + EA K+F+ +P +DVV WNAM++GYAQ G +
Sbjct: 107 ---------DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDE 157
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A EVF +M + + G+L+A + G K R + + + + N L+
Sbjct: 158 AREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARR----LFESQSNWELISWNCLMG 209
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------M 327
Y K +G+A ++F+ M +D+ SWN++++ + Q G+ RLF+ M
Sbjct: 210 GYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAM 269
Query: 328 LSAGFQPDLV----TFSTVLPACSHLA--ALMHGRQIHGYIVVNG-LAKNGSCKDIDDVF 380
+S Q +V + +P + ++ A++ G + +V+ G L + C++I
Sbjct: 270 VSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSW- 328
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
N ++ Y + G + A+ +F M ++D SW +I GY +G +EAL+MF M
Sbjct: 329 --NTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT------CVIDMLGRA 494
+ TF LS C+ L G++ +G V T ++ M +
Sbjct: 387 ESSNRSTFSCALSTCADIAALELGKQV-------HGQVVKAGFETGCFVGNALLGMYFKC 439
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
G +EA ++ + E + V W T++A HG
Sbjct: 440 GSTDEANDVFEGI-EEKDVVSWNTMIAGYARHG 471
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
++ DI +WN ++ H + G+ D LR+F+ M +++ +
Sbjct: 42 KDPDIVTWNKAISSHMRNGHCDSALRVFNSM-------------------PRRSSVSYNA 82
Query: 357 QIHGYIVVNGLAKNGSCKDI------DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
I GY+ AK +D+ D+F N ++ Y + + +A +F M KKDV
Sbjct: 83 MISGYLRN---AKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDV 139
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN M+ GY +G EA ++F+ M + +++ G+L+A H+G L + R
Sbjct: 140 VSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFE- 194
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+S + ++ + C++ + L +A +L MP + + W T+++ G D
Sbjct: 195 SQSNWELIS----WNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMISGYAQVG--D 247
Query: 531 LAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEV 566
L++ A+R+F P + M + YV G +E
Sbjct: 248 LSQ--AKRLFNESPIRDVFTWTAMVSGYVQNGMVDEA 282
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 25/284 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T +L CA L+ G+++H +++ G +L+ MY KC A VF
Sbjct: 392 STFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEG 451
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E +V ++N MI+G+ + F + L F M++ GV PD+ T ++ C +
Sbjct: 452 IE-EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLI-- 508
Query: 153 VKKIHGLVFKLGLDLDVYIG------SALVNTYLKCQFMEEALKVFEELPLRD-VVLWNA 205
G + +D D + + +++ + +EEA + +P W A
Sbjct: 509 ---DRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGA 565
Query: 206 M-----VNGYAQIGEFHKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
+ ++G ++GE KA E+ +M + G+++ + + +G ++
Sbjct: 566 LLGASRIHGNTELGE--KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREA 623
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCV-GEALEIFEMMEEKDI 301
G+ GY S V V N I + G C E I+ +EE D+
Sbjct: 624 GVQKVTGY-SWVEVQNK-IHTFSVGDCFHPEKDRIYAFLEELDL 665
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 360/638 (56%), Gaps = 35/638 (5%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN-MYSKCCQMK 84
+HP + +L+ C T ++ +IH+ ++ +G++ PL+ + + S ++
Sbjct: 57 LSHPI-----LRTLESCCGST--KEFNQIHTQLIVSGLLQQPLAAGRAVKTLCSFPDSVQ 109
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKC 143
+A+ +F L EP+ F N ++ + + + + L F+ M + V P+ YTFP L+K
Sbjct: 110 HAVSLFEGLE-EPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKV 168
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C ++ ++ + +KIH + K G +LD+++ ++L++ Y C + +A +FE + D+V W
Sbjct: 169 CWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTW 228
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV--HGIV 261
N+M++GY + GE A E+F M + + F+ +++ G+ NG + +
Sbjct: 229 NSMIDGYVKNGEIGAARELFEEMPERDL----FSWNSMIA-----GYVGNGDMTAAEDLF 279
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
KM + V N +ID Y + + + A E+F M +++ SWN ++ ++ + ++D L
Sbjct: 280 NKMPFRDIVS-WNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECL 338
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
R+FD+M+ P+ T +VL AC+HL L G+ IH YI N + + DV +
Sbjct: 339 RMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIE-------PDVLL 390
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+ AL+ MY KCG+M A+ VF KMS + V SWN MI+GYGM GQ +AL+MF M +
Sbjct: 391 STALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKRGP 450
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
P++ TF+ VLSAC+HSG + +G + LM Y + P +EHY C++D+LGRAG + +
Sbjct: 451 MPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLE 510
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
EL MP E +W LL+A R H N++LAEI A+R+ +LEP G Y+L+SNIY A G
Sbjct: 511 ELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEG 570
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKD-GLHTFISSDRSHPEAKSIYAELHSLTARL 620
K+++V +R M+++ + K G SW+ +++ G +F+ H ++ +Y+ L + ++
Sbjct: 571 KWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKASVHRKSM-MYSILSDMATQM 629
Query: 621 R-EHGDCC-AGTLFDSDSTASGFEKHRLYLEEVIAKGS 656
+ GD L + TA+ + KH + + I+KG+
Sbjct: 630 KLSCGDYDEVENLTEVHPTATYWVKHDTW-PDSISKGA 666
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 44/267 (16%)
Query: 1 MLSKISRINPFSSCFN-FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
ML+ RI + C F G N AT ++ L CAH L +G+ IHSY+
Sbjct: 324 MLALYVRIKDYDECLRMFDKMMGETMPNE----ATLVSVLTACAHLGRLDRGKWIHSYIK 379
Query: 60 RTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+I+ + + T+L+ MY+KC M A VF+ +S +V ++N+MI G+ + A K
Sbjct: 380 NNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNR-SVVSWNSMIMGYGMHGQADKA 438
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-------------------------- 152
L+ F M + G +P+ TF C++ C +LE
Sbjct: 439 LEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVD 498
Query: 153 -------VKKIHGLVFKLGLDLDVYIGSALVN---TYLKCQFMEEALKVFEELPLRDVVL 202
+K + L+ K+ ++ + AL++ T+ + E K EL RD+
Sbjct: 499 LLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGP 558
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ + N YA G++ +E+ R+M KE
Sbjct: 559 YLLLSNIYAAEGKWDD-VEIVRKMMKE 584
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 321/571 (56%), Gaps = 14/571 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S+ +++G++D+ S ++L+++Y+KC ++ A VF+ + N ++NA+I+G+
Sbjct: 114 GAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVR-NTVSWNALIAGYA 172
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + ++ F M+++ ++PD TF L+ ++++HG + K G L +
Sbjct: 173 ESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLV 232
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE- 229
+ +A + Y +C ++ ++F+ + RD++ WN+M+ YA G +A+ F RM +E
Sbjct: 233 VLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRES 292
Query: 230 GIWMSRFTVTGVLSALIMMGFF-KNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
G+ ++ T V+S G + GR +H +VVK+G + V NA+I MY + C+
Sbjct: 293 GVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCM 352
Query: 287 GE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
E A + F+ + KD SWNS++T + G LR F M + D S L +
Sbjct: 353 MEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRS 412
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS LA L GRQ+H ++ +G + N F++++L+ MY+KCG + DA+ F +
Sbjct: 413 CSDLAVLRLGRQVHSLVIQSGFSSND--------FVSSSLIFMYSKCGMVGDARKSFEEA 464
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K WN M+ GY GQ + D+FS M + K+ D VTFV +L+A SH G + +G
Sbjct: 465 DKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGS 524
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L ME+RY + +EHY C +D+ GRAGQL++A EL +MP + + +VW TLL A R+
Sbjct: 525 EILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRI 584
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A +F EP YVL+S++Y G + + ++ M+ + + K PG S
Sbjct: 585 HGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWS 644
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
WIE+K+ +H+F + DRSHP I+ L L
Sbjct: 645 WIEVKNEVHSFNADDRSHPRMDEIFDMLRML 675
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 9/276 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ A +VF+E+P D V WN+++ + G A + + M G+ S F + L +
Sbjct: 45 LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRS 104
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G + VK G V +AL+D+Y K + +A +F+ M ++ SW
Sbjct: 105 AAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSW 164
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+++ + + + LF M PD TF+ +L + +Q+HG I
Sbjct: 165 NALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKI-- 222
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
AK GS + + NA + Y++CG+ D++ +F + +D+ SWN M+ Y G
Sbjct: 223 ---AKYGSALGL---VVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHG 276
Query: 425 QGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSHSG 459
EA+ F M E+ ++PD +F V+S CS G
Sbjct: 277 MDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHG 312
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 263 KMGYDSGVPVMNALIDMY---GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
K G S P N L+ Y G G + A +F+ + D SWNS++ H G H
Sbjct: 20 KSGATSPTP-WNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRD 78
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
RL M + G + L + + G Q+ + V +GL +D+V
Sbjct: 79 AWRLLKDMHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGL--------VDNV 130
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F +AL+D+Y KCG + DA+ VF M ++ SWN +I GY + +A+++F M
Sbjct: 131 FSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRV 190
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLME------SRYGVVPTIEHYTCVIDMLGR 493
+L PD+ TF +L+ +G + LM+ ++YG + I +
Sbjct: 191 ELVPDDATFAALLATV-------EGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQ 243
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G ++ + + + + + W ++L A HG D A
Sbjct: 244 CGAFADSRRIFDGIQSR-DLISWNSMLGAYAYHGMDDEA 281
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 336/600 (56%), Gaps = 14/600 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +C+ + N+ G IH ++ G++ + +LI+MYSKC + A +F
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL--PDKYTFPCLIKCCCDVMA 149
+ +V ++N+MI + F F+ D M L ++ T L+ C +
Sbjct: 373 KIE-NKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+L ++ +HG + I +A + Y KC + A VF + + V WNA++ G
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ G+ KAL+ + M++ GI F++ +L A +G + G+ +HG V++ G +
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN 551
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+ +Y FE M +K+ WN++++ + Q + L LF +MLS
Sbjct: 552 SFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS 611
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD + +++L ACS L+AL G+++H + + N L ++D F+ +LMDMY
Sbjct: 612 DGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL--------MEDNFVACSLMDMY 663
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K G + +Q +F +++ K+VASWN+MI G+G+ GQG +A+++F M + +PD TF+
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC H+G +S+G +L M++ Y + P +EHY CVIDMLGRAG+LNEA MP
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + +W +LL++S + + ++ E A+++ LE +Y+L+SN+Y GK++ V +
Sbjct: 784 EPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMV 843
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M+ +++K+ GCSWIEL+ +++FI+ + S+P + I + L ++ E G DC
Sbjct: 844 RQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDC 903
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 234/434 (53%), Gaps = 15/434 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C N++ G+++ + + + T LI MYS C + VF+ L
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL-LNK 172
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA++SG+ N+ + + F + + PD +TFPCLIK C + K +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+ K+GL +D+++G+A++ Y KC F++EA+++F+++P ++++ WN+++ G+++ G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 217 HKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A FR + S +G+ T+ +L G G V+HG+ VK+G + V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML--SAGF 332
ALIDMY K C+ EA +F +E K + SWNS++ + + G T L +M
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + VT +LPAC + L+ R +HGY L + K++ +NNA + Y KC
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGY----SLRHSFQYKEL----INNAFIAAYAKC 464
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ A+ VF M+ K V+SWN +I G+ +G +ALD + M + PD+ + V +L
Sbjct: 465 GSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL 524
Query: 453 SACSHSGFLSQGRE 466
AC G L G+E
Sbjct: 525 LACGRLGLLQYGKE 538
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 336/600 (56%), Gaps = 14/600 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +C+ + N+ G IH ++ G++ + +LI+MYSKC + A +F
Sbjct: 313 VATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFR 372
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL--PDKYTFPCLIKCCCDVMA 149
+ +V ++N+MI + F F+ D M L ++ T L+ C +
Sbjct: 373 KIE-NKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESE 431
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+L ++ +HG + I +A + Y KC + A VF + + V WNA++ G
Sbjct: 432 LLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ G+ KAL+ + M++ GI F++ +L A +G + G+ +HG V++ G +
Sbjct: 492 HAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMN 551
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+ +Y FE M +K+ WN++++ + Q + L LF +MLS
Sbjct: 552 SFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLS 611
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD + +++L ACS L+AL G+++H + + N L ++D F+ +LMDMY
Sbjct: 612 DGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSL--------MEDNFVACSLMDMY 663
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K G + +Q +F +++ K+VASWN+MI G+G+ GQG +A+++F M + +PD TF+
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC H+G +S+G +L M++ Y + P +EHY CVIDMLGRAG+LNEA MP
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPE 783
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + +W +LL++S + + ++ E A+++ LE +Y+L+SN+Y GK++ V +
Sbjct: 784 EPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMV 843
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M+ +++K+ GCSWIEL+ +++FI+ + S+P + I + L ++ E G DC
Sbjct: 844 RQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPDC 903
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 234/434 (53%), Gaps = 15/434 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C N++ G+++ + + + T LI MYS C + VF+ L
Sbjct: 114 LQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRL-LNK 172
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA++SG+ N+ + + F + + PD +TFPCLIK C + K +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+ K+GL +D+++G+A++ Y KC F++EA+++F+++P ++++ WN+++ G+++ G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 217 HKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A FR + S +G+ T+ +L G G V+HG+ VK+G + V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML--SAGF 332
ALIDMY K C+ EA +F +E K + SWNS++ + + G T L +M
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + VT +LPAC + L+ R +HGY L + K++ +NNA + Y KC
Sbjct: 413 EVNEVTILNLLPACLEESELLSLRALHGY----SLRHSFQYKEL----INNAFIAAYAKC 464
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ A+ VF M+ K V+SWN +I G+ +G +ALD + M + PD+ + V +L
Sbjct: 465 GSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLL 524
Query: 453 SACSHSGFLSQGRE 466
AC G L G+E
Sbjct: 525 LACGRLGLLQYGKE 538
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 310/556 (55%), Gaps = 20/556 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK---YALFVFNNLSCEPNVFTYNAMISG 108
Q++H+ M+ I SP + ++ SK +K YA +F++++ PN + +N MI
Sbjct: 35 QQVHAQMVVKSSIHSPNN-----HLLSKAIHLKNFTYASLLFSHIAPHPNDYAFNIMIRA 89
Query: 109 FYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + L F+ M L + P+ +TFP C ++ + + H LVFKL L
Sbjct: 90 LTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHS 149
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D + +L+ Y +C + A KVF+E+P RD+V WN+M+ GYA+ G +A+EVF M
Sbjct: 150 DPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMG 209
Query: 228 K-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ +G ++ VL A +G + GR V G VV+ G + +ALI MY K +
Sbjct: 210 RRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDL 269
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
G A IF+ M +D+ +WN++++ + Q G D + LF M + +T + VL AC
Sbjct: 270 GSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSAC 329
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ + AL G+QI Y G D+F+ AL+DMY KCGS+ AQ VF +M
Sbjct: 330 ATIGALDLGKQIDEYASQRGFQH--------DIFVATALIDMYAKCGSLASAQRVFKEMP 381
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSACSHSGFLSQG 464
+K+ ASWN MI G+ KEAL +F CM + +P+++TFVG+LSAC H+G +++G
Sbjct: 382 QKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEG 441
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+M + +G+VP IEHY+C++D+L RAG L EA++L MP + + V LL A R
Sbjct: 442 YRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACR 501
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
N D+ E + + +++P + GNY++ S IY +E+ +R MRQ+ + K PGC
Sbjct: 502 SKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGC 561
Query: 585 SWIELKDGLHTFISSD 600
SWIE+++ LH F + D
Sbjct: 562 SWIEVENHLHEFHAGD 577
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/582 (35%), Positives = 319/582 (54%), Gaps = 25/582 (4%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP--NVFTYNAM 105
L GQ++HS +++ G + + ++L++MY+KC +++ A VF C P N ++NA+
Sbjct: 118 LDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFK---CIPRRNSVSWNAL 174
Query: 106 ISGFY---SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
I+GF +D AF M + GV D TF L+ + ++H + K
Sbjct: 175 IAGFVLEGDHDTAFW---LLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIK 231
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALE 221
G+ D + +A + +Y +C +E+A +VF+ + RD+V WN+M+ + A +
Sbjct: 232 HGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFK 291
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY- 280
+F M + G +T T ++SA NG+ +HG+V+K G + VP+ NA+I MY
Sbjct: 292 LFLDMQQFGFEPDIYTYTTIISAC---SHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYL 348
Query: 281 -GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
+ +AL +F ME KD SWNSI+T Q G+ + L+LF M A D F
Sbjct: 349 ESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAF 408
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
S VL +CS LA L G+QIH V +G N F+ ++L+ MY+KCG + DA+
Sbjct: 409 SAVLRSCSDLATLQLGQQIHVLTVKSGFESND--------FVASSLIFMYSKCGMIEDAR 460
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
F K +K +WN ++ Y GQG AL +F M + K+K D +TFV L+ACSH G
Sbjct: 461 KSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIG 520
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ QGR L M S YG+ P +EHY C +D+ GRAG L+EA L +MP + + +VW+TL
Sbjct: 521 LVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTL 580
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L A R G+ +LA A + +LEP YV++SN+Y +++E + MR++ V+
Sbjct: 581 LGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVK 640
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
K PG SWIE+K+ +H FI+ DR H + IY L L ++
Sbjct: 641 KVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILEQLMEDIK 682
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 246/487 (50%), Gaps = 27/487 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQ--MKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
H ++ G + ++++ Y++C + +A +F+ +S V T+N MISG+ ++
Sbjct: 22 HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTV-TWNTMISGYVNS 80
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIK---CCCDVMAVLEV-KKIHGLVFKLGLDLD 168
+ + M+ G++PD YTF ++K C C L+V +++H L+ K+G +
Sbjct: 81 GSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACR----LDVGQQVHSLIVKMGYEEH 136
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
VY GSAL++ Y KC+ + +A VF+ +P R+ V WNA++ G+ G+ A + R M +
Sbjct: 137 VYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEE 196
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
EG+ + T + +L+ L F+K +H ++K G V NA I Y + + +
Sbjct: 197 EGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLED 256
Query: 289 ALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A +F+ + +D+ +WNS++ + +LF M GF+PD+ T++T++ ACS
Sbjct: 257 AERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACS 316
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY--TKCGSMRDAQMVFTKM 405
H +G+ +HG ++ GL + V + NA++ MY + SM DA VF M
Sbjct: 317 HKD---NGKSLHGLVIKRGLEQL--------VPICNAVIAMYLESSSNSMEDALNVFHSM 365
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
KD SWN ++ G+ G + AL +F M A + D F VL +CS L G+
Sbjct: 366 ESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQ 425
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ + ++ + G + +I M + G + +A + + + + + W +++ A
Sbjct: 426 Q-IHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARK-SFEKTAKDSSITWNSIMFAYAQ 483
Query: 526 HGNTDLA 532
HG D+A
Sbjct: 484 HGQGDVA 490
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ LQ GQ+IH +++G + +SLI MYSKC ++ A F + +
Sbjct: 410 AVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKD 469
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK- 155
++ T+N+++ + + L F MR V D TF + C + V + +
Sbjct: 470 SSI-TWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYL 528
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIG 214
+ + G+ + + V+ + + +++EA + E +P D ++W ++ G
Sbjct: 529 LKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACG 588
Query: 215 EFHKALEV 222
+ A +V
Sbjct: 589 DIELAAQV 596
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/572 (34%), Positives = 329/572 (57%), Gaps = 16/572 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G ++ S L++G+ ++ + ++L+++Y+KC +++ A VF+ + E N ++NA+I+G+
Sbjct: 112 GAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMP-ERNTVSWNALIAGYT 170
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L+ F M + G++PD+ TF L+ L + ++HG + K G L +
Sbjct: 171 ESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFL-MHQLHGKIVKYGSALGLT 229
Query: 171 IGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +A + Y +C ++++ ++F+ + +RD++ WNAM+ Y G +A++ F RM +E
Sbjct: 230 VLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQE 289
Query: 230 -GIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKC 285
G+ ++ T ++S+ G + GRV+HG+V+K + PV NALI MY + C
Sbjct: 290 SGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENC 349
Query: 286 VGE-ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ E A + F + KD SWNS++T + Q G L+ F M S + D FS L
Sbjct: 350 MMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALR 409
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ S LA L G+QIHG ++ +G A N F++++L+ MY+K G + DA+ F +
Sbjct: 410 SSSELAVLQLGKQIHGLVIHSGFASND--------FVSSSLIFMYSKSGIIDDARKSFEE 461
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
K WN MI GY GQ + +F+ M + K D +TFVG++++CSH+G + +G
Sbjct: 462 ADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEG 521
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
E L ME++YGV +EHY C +D+ GRAGQL++A +L +MP E + +VW TLL A R
Sbjct: 522 SEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACR 581
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+HGN +LA A +F EP YVL+S++Y G + + ++ M+++ + K PG
Sbjct: 582 IHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGW 641
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
S IE+K+ +H+F + D+SHP+ IY L L
Sbjct: 642 SLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL 673
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 17/349 (4%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
+ A +VF+E+P RD V WNA++ +A G +A + R M +G+ + F + L +
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G + + +K G + V +AL+D+Y K V +A ++F+ M E++ SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA-LMHGRQIHGYIV 363
N+++ + + G+ L LF M G PD TF+++L A + LMH Q+HG IV
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMH--QLHGKIV 220
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGM 422
G A + + NA + Y++CGS++D++ +F + +D+ SWN M+ Y
Sbjct: 221 KYGSALG--------LTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTH 272
Query: 423 DGQGKEALDMF-SCMCEAKLKPDEVTFVGVLSACSHSGFLS-QGREF--LPLMESRYGVV 478
+G EA+ F M E+ + PD +F ++S+CS G QGR L + + GV
Sbjct: 273 NGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVT 332
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
P + + +AY+ ++ + + V W ++L HG
Sbjct: 333 PVCNALIAMYTRYNENCMMEDAYKCFNSLVLK-DTVSWNSMLTGYSQHG 380
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L+ + LQ G++IH ++ +G + +SLI MYSK + A F
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V +NAMI G+ + A FN M Q D TF LI C V E +I
Sbjct: 466 SSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Query: 157 -HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ + K G+ L + + V+ Y + +++A K+ + +P D ++W
Sbjct: 525 LNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVW 573
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 333/604 (55%), Gaps = 20/604 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A+LQ + ++ G IH +L++ +LI MY+KC +M+ A VF ++
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESM 309
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
C V ++N ++SG N+ L++F M+ G PD+ + LI +L+
Sbjct: 310 LCRDYV-SWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKG 368
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + GLD ++ IG+ LV+ Y KC ++ FE + +D++ W ++ GYAQ
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ- 427
Query: 214 GEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
EFH +A+ +FR++ +G+ + + VL A + R +HG V K + + +
Sbjct: 428 NEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIML 486
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG----TLRLFDRML 328
NA++++YG+ + A FE + KDI SW S++T C H+G L LF +
Sbjct: 487 QNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMIT----CCVHNGLPVEALELFYSLK 542
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
QPD + + L A ++L++L G++IHG+++ G G + ++L+DM
Sbjct: 543 QTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP--------IASSLVDM 594
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y CG++ +++ +F + ++D+ W MI GM G G +A+ +F M + + PD +TF
Sbjct: 595 YACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITF 654
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ +L ACSHSG + +G+ F +M+ Y + P EHY C++D+L R+ L EAY MP
Sbjct: 655 LALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMP 714
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ + +W LL A +H N +L E+AA+ + Q + + G Y L+SNI+ A G++ +V +
Sbjct: 715 IKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEE 774
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA 628
+R M+ ++KNPGCSWIE+ + +HTF++ D+SHP+ IY +L T L + G A
Sbjct: 775 VRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIA 834
Query: 629 GTLF 632
T F
Sbjct: 835 QTKF 838
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 258/537 (48%), Gaps = 19/537 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP- 97
L+ C + G EIH ++ G + +LI MY KC + A +F+ + E
Sbjct: 152 LKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKE 211
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++N++IS + + L F M+++GV + YTF ++ D V IH
Sbjct: 212 DTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIH 271
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K DVY+ +AL+ Y KC ME+A +VFE + RD V WN +++G Q +
Sbjct: 272 GAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYS 331
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL FR M G + +V +++A G G+ VH ++ G DS + + N L+
Sbjct: 332 DALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLV 391
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K CV FE M EKD+ SW +I+ + Q H + LF ++ G D +
Sbjct: 392 DMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPM 451
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+VL ACS L + R+IHGY+ +D+ D+ + NA++++Y + G +
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFK---------RDLADIMLQNAIVNVYGEVGHIDY 502
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ F + KD+ SW MI +G EAL++F + + ++PD + + LSA ++
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +G+E + R G + ++DM G + + ++ ++ + + ++W
Sbjct: 563 LSSLKKGKEIHGFL-IRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWT 620
Query: 518 TLLAASRLH--GNTDLAEIAAQRVFQLEPGHCGNYVLM-----SNIYVAGGKYEEVL 567
+++ A+ +H GN +A + P H L+ S + V G ++ E++
Sbjct: 621 SMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/420 (30%), Positives = 218/420 (51%), Gaps = 13/420 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L LC L +GQ++H+ +L++ + S T L+ MY KC ++ A+ VF+ +S E
Sbjct: 53 LDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMS-ERT 109
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+F++NA++ F S+ + ++ + MR LGV D TFP ++K C + +IHG
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEF 216
+ K G V++ +AL+ Y KC + A +F+ + + D V WN++++ + G
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL +FRRM + G+ + +T L + F K G +HG V+K + + V V NAL
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANAL 289
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I MY K + +A +FE M +D SWN++++ Q + L F M ++G +PD
Sbjct: 290 IAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQ 349
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
V+ ++ A L+ G+++H Y + NGL N + + N L+DMY KC ++
Sbjct: 350 VSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSN--------MQIGNTLVDMYAKCCCVK 401
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
F M +KD+ SW +I GY + EA+++F + + D + VL ACS
Sbjct: 402 YMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 197/388 (50%), Gaps = 20/388 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+ C A+ + +++H L+ K L ++ + LV Y KC + +A+KVF+E+ R
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKS--HLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+ WNA++ + G++ +A+E+++ M G+ + T VL A +G + G +HG
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNH 317
+ VK GY V V NALI MYGK +G A +F+ MME++D SWNSI++ H GN
Sbjct: 170 VAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNC 229
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L LF RM G + TF L + + G IHG ++
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVL--------KSNHFA 281
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
DV++ NAL+ MY KCG M DA VF M +D SWN ++ G + +AL+ F M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQ 341
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR---A 494
+ KPD+V+ + +++A SG L +G+E + R G+ ++ ++DM +
Sbjct: 342 NSGQKPDQVSVLNLIAASGRSGNLLKGKE-VHAYAIRNGLDSNMQIGNTLVDMYAKCCCV 400
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAA 522
+ A+E +E + + W T++A
Sbjct: 401 KYMGHAFECM----HEKDLISWTTIIAG 424
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 183/473 (38%), Positives = 279/473 (58%), Gaps = 10/473 (2%)
Query: 154 KKIHGLVFKLGLDL-DVYIGSALVNTYLK-CQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IH + G+ L + +G L+ T L C M A ++F ++ ++ WN M+ GYA
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ ALE++R+M I T +L A+ + + G VH I ++ G++S V
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N L+ MY A ++FE+M E+++ +WNS++ + G + L LF M G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD T ++L AC+ L AL GR+ H Y+V GL N + NAL+D+Y K
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGN--------LHAGNALLDLYAK 288
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+R A VF +M +K V SW +I+G ++G GKEAL++F + L P E+TFVGV
Sbjct: 289 CGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGV 348
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L ACSH G + +G ++ M+ YG+VP IEHY C++D+LGRAG + +A+E MP +
Sbjct: 349 LYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQP 408
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
N VVWRTLL A +HG+ L E+A ++ QLEP H G+YVL+SN+Y + ++ +V +R
Sbjct: 409 NAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRR 468
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
TM ++ V+K PG S +EL++ LH F+ DRSHP+ + IY +L +T L+ G
Sbjct: 469 TMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEG 521
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 221/452 (48%), Gaps = 47/452 (10%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSL 73
F STS+ ++ + L CIA L CA ++ K ++IH++ +R G+ + +P L
Sbjct: 23 FTISTSTCPES-PKSYILKKCIALLLSCA--SSKFKFRQIHAFSIRHGVPLTNPDMGKYL 79
Query: 74 I-NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
I + S C M YA +F+ + PN+FT+N MI G+ ++ L+ + M + P
Sbjct: 80 IFTLLSFCSPMSYAHQIFSQIQ-NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEP 138
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D +T+P L+K +M V E +K+H + + G + V++ + LV+ Y C E A K+F
Sbjct: 139 DTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLF 198
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
E + R++V WN+++NGYA G ++AL +FR M G+ FT+ +LSA +G
Sbjct: 199 ELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALA 258
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
GR H +VK+G D + NAL+D+Y K + +A ++F+ MEEK + SW S++
Sbjct: 259 LGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLA 318
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G L LF + G P +TF VL ACSH
Sbjct: 319 VNGFGKEALELFKELERKGLMPSEITFVGVLYACSH------------------------ 354
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C +D+ F D + + M++ + K + + M+ G G K+A +
Sbjct: 355 CGMVDEGF------DYFKR---MKEEYGIVPK-----IEHYGCMVDLLGRAGLVKQAHEF 400
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M ++P+ V + +L AC+ G L+ G
Sbjct: 401 IQNM---PMQPNAVVWRTLLGACTIHGHLALG 429
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 313/571 (54%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+HS +++ G + +LIN YS C + A VF + C+ ++ + ++S + N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVENG 226
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L + MR G +P+ YTF +K + A K +HG + K LD +G
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
L+ Y + M +A KVF E+P DVV W+ M+ + Q G ++A+++F RM + +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ FT++ +L+ + G +HG+VVK+G+D + V NALID+Y K + + A+++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ K+ SWN+++ +E G +F L VTFS+ L AC+ LA++
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG + AK V ++N+L+DMY KCG ++ AQ VF +M DVASW
Sbjct: 467 LGVQVHGLAIKTNNAKK--------VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY G G++AL + M + KP+ +TF+GVLS CS++G + QG+E M
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P +EHYTC++ +LGR+GQL++A +L +P E + ++WR +L+AS N + A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A+ + ++ P YVL+SN+Y ++ V IR +M++ V+K PG SWIE + +
Sbjct: 639 RSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDV 698
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ K I L L + G
Sbjct: 699 HYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 229/494 (46%), Gaps = 21/494 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C + + + IH +L+ G + L+N Y K K AL +F+ + E
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP-E 112
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++ + G+ D + ++ + + G + + F +K + +
Sbjct: 113 RNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + KLG D + ++G+AL+N Y C ++ A VFE + +D+V+W +V+ Y + G F
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+L++ M G + +T L A I +G F + VHG ++K Y V L
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ +Y + + +A ++F M + D+ W+ ++ Q G + + LF RM A P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S++L C+ G Q+HG +V G D+ D++++NAL+D+Y KC M
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGF-------DL-DIYVSNALIDVYAKCEKMD 400
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A +F ++S K+ SWN +I+GY G+G +A MF ++ EVTF L AC+
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-- 514
+ G + L + + +IDM + G + + A ++ NE +
Sbjct: 461 SLASMDLGVQVHGL-AIKTNNAKKVAVSNSLIDMYAKCGDI----KFAQSVFNEMETIDV 515
Query: 515 -VWRTLLAASRLHG 527
W L++ HG
Sbjct: 516 ASWNALISGYSTHG 529
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 16/393 (4%)
Query: 130 VLP--DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
++P D + + +++ C + K IH + K G LD++ + L+N Y+K F ++
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL +F+E+P R+ V + + GYA + ++ R+ +EG ++ T L +
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + +H +VK+GYDS V ALI+ Y V A +FE + KDI W I
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
++ + + G + +L+L M AGF P+ TF T L A L A + +HG I+
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL---- 274
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+C +D + L+ +YT+ G M DA VF +M K DV W+ MI + +G
Sbjct: 275 ---KTCYVLDPR-VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EA+D+F M EA + P+E T +L+ C+ G + L+ + G I +
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV-VKVGFDLDIYVSNAL 389
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
ID+ + +++ A +L A + N V W T++
Sbjct: 390 IDVYAKCEKMDTAVKL-FAELSSKNEVSWNTVI 421
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++L CA ++ G ++H ++T SLI+MY+KC +K+A VF
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + +V ++NA+ISG+ ++ + L + M+ P+ TF ++ C + +
Sbjct: 508 NEME-TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 151 LEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
+ ++ ++ G++ + + +V + +++A+K+ E +P V++W AM++
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 209 GYAQIGEFHKALEVFRRMSKEGI 231
++ E F R S E I
Sbjct: 627 -----ASMNQNNEEFARRSAEEI 644
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 322/613 (52%), Gaps = 62/613 (10%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYN 103
T+LQ ++H+ +LR+G +L+ Y+ +AL VF+++ PNVF +N
Sbjct: 44 TSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIP-NPNVFIWN 102
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+I G N+ FK + F+ M + P+K+T+P L K C AV E ++IHG V K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+ DV+I SA + Y +E+A K+F DVV WN M++GY + G A +F
Sbjct: 162 GIGSDVHIKSAGIQMYASFGRLEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 224 RRMSKEGI--WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+M + I W N +I+
Sbjct: 221 AQMPVKNIGSW-----------------------------------------NVMINGLA 239
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
KG +G+A ++F+ M E+D SW+S++ + G + L +F +M +P S+
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL ACS++ A+ GR +H Y+ N + D + AL+DMY KCG + V
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKL--------DAVLGTALLDMYAKCGRLDMGWEV 351
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M ++++ +WN MI G + G+ ++AL++FS + E ++KP+ +T VGVL+AC+H+GF+
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G M YGV P +EHY C++D+LGR+G +EA +L +MP + N VW LL
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+HGN DLAE + + +LEP + G YVL+SNIY G++++V IR M+ + ++
Sbjct: 472 ACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTV 531
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR--EHGDCCAGTLFDSD---- 635
PG S ++L +H F D SHP+ K IY +L + RL+ H + LFD D
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEK 591
Query: 636 STASGFEKHRLYL 648
TA + +L +
Sbjct: 592 ETAVNYHSEKLAI 604
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 6/208 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F +T F L++ +A+ C++ + +G+ +H+Y+ R I + T+L++M
Sbjct: 282 FQQMQREETRPGRFILSSVLAA---CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y+KC ++ VF + E +FT+NAMI G + A L+ F+ +++ + P+ T
Sbjct: 339 YAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
++ C V + +I + + G+D ++ +V+ + EA + +
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 196 PLR-DVVLWNAMVNGYAQIGEFHKALEV 222
P++ + +W A++ G F A V
Sbjct: 458 PMKPNAAVWGALLGACRIHGNFDLAERV 485
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 219/634 (34%), Positives = 336/634 (52%), Gaps = 72/634 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+ C +N + G IH ++R G + ++I+MY KC + +A VF+ L C
Sbjct: 133 FKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDEL-CYRG 191
Query: 99 V---FTYNAMISGFYSNDFAFK-GLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ T+N+++S YS+ F + F M G+LPD ++ C + L
Sbjct: 192 ICDSVTWNSIVS-VYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCG 250
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++HG + GL DV++G+ALV+ Y KC ME+A KVFE + +DVV WNAMV GY+Q
Sbjct: 251 RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQN 310
Query: 214 GEFHKALEVFRRMSKEGI------WMSRF-----------------------------TV 238
G F AL +F +M +E I W S T+
Sbjct: 311 GRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTL 370
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKM-------GYDSGVPVMNALIDMYGKGKCVGEALE 291
+LSA +G +G+ H VK + V+NALIDMY K K + A
Sbjct: 371 MSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARA 430
Query: 292 IFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACS 347
+F+ + +++D+ +W ++ + Q G+ + L+LF M P+ T S VL AC+
Sbjct: 431 MFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACA 490
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
LAAL G+QIH Y++ S D D +F+ N L+DMY+K G + AQ+VF MSK
Sbjct: 491 RLAALKFGKQIHAYVL------RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 544
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++ SW ++ GYGM G+ ++A +F M + L D +TF+ VL ACSHSG
Sbjct: 545 RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM------- 597
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+GV P +EHY C++D+LGRAG+L EA L MP E PVVW LL+A R+H
Sbjct: 598 ------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHS 651
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N +LAE AA+++ +L+ + G Y L+SNIY ++++V I + M++ ++K PG SW+
Sbjct: 652 NEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWV 711
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+ + G+ TF DR+H +++ IY L L R++
Sbjct: 712 KGRKGMETFYVGDRTHLQSQKIYETLADLIKRIK 745
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 259/533 (48%), Gaps = 49/533 (9%)
Query: 47 NLQKGQEIHS-YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF--NNLSCEPNVFTYN 103
L + + +H Y++ +++S ++T+LI Y + A+ + N +V+ +N
Sbjct: 36 TLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWN 95
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+I + L F M+ L PD YTFP + K C ++ IHG V +L
Sbjct: 96 QLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRL 155
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR---DVVLWNAMVNGYAQIGEFHKAL 220
G + +V++ +A+++ Y KC+ + A KVF+EL R D V WN++V+ Y+ + A+
Sbjct: 156 GFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAV 215
Query: 221 EVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+FR M+ GI V +L +G GR VHG V+ G V V NAL+DM
Sbjct: 216 SLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDM 275
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K + +A ++FE M KD+ +WN+++T + Q G + L LF +M + D+VT+
Sbjct: 276 YAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTW 335
Query: 340 STV-----------------------------------LPACSHLAALMHGRQIHGYIVV 364
S+V L AC+ + AL+HG++ H Y V
Sbjct: 336 SSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCY-SV 394
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGM 422
+ K D DD+ + NAL+DMY KC S+ A+ +F ++ K DV +W +MI GY
Sbjct: 395 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 454
Query: 423 DGQGKEALDMFSCMCEAK--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G AL +FS M + + P++ T VL AC+ L G++ + R +
Sbjct: 455 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSD 514
Query: 481 IEHYT-CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ C+IDM ++G ++ A ++ ++ N V W +LL +HG ++ A
Sbjct: 515 VLFVANCLIDMYSKSGDVDTA-QVVFDSMSKRNAVSWTSLLTGYGMHGRSEDA 566
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 25/291 (8%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLR-------TGIIDSPLSITSLINMYSKCCQMK 84
+ T ++ L CA L G+E H Y ++ D I +LI+MY+KC ++
Sbjct: 367 VVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLE 426
Query: 85 YALFVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLI 141
A +F+ + + +V T+ MI G+ + A L F+ M ++ ++P+ +T C++
Sbjct: 427 VARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVL 486
Query: 142 KCCCDVMAVLEVKKIHGLVFKLG-LDLDV-YIGSALVNTYLKCQFMEEALKVFEELPLRD 199
C + A+ K+IH V + +D DV ++ + L++ Y K ++ A VF+ + R+
Sbjct: 487 MACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRN 546
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V W +++ GY G A VF M KE + + T VL A G
Sbjct: 547 AVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG---------- 596
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMT 309
+ G D GV ++D+ G+ +GEA+ + +M E W ++++
Sbjct: 597 --MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLS 645
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 188/589 (31%), Positives = 326/589 (55%), Gaps = 21/589 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ L++G+ +H+ + GI SL++MY++C M A VF+ E + +
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAAD-ERDDVS 182
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC----DVMAVLEVKKIH 157
+NA++SG+ L F MR+ G+ + + +IKCC VM + +H
Sbjct: 183 WNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDI--AAAVH 240
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY----AQI 213
G V K G D DV++ SA+V Y K + EA+ +F+ + +VV++NAM+ G A +
Sbjct: 241 GCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAV 300
Query: 214 GE--FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +AL ++ + G+ + FT + V+ A + G + G+ +HG V+K +
Sbjct: 301 GTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF 360
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +ALID+Y C+ + F + ++D+ +W ++++ Q + L LF +L AG
Sbjct: 361 IGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAG 420
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD T S+V+ AC+ LA G QI + +G + + M N+ + MY +
Sbjct: 421 LKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTA--------MGNSCIHMYAR 472
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + A F +M D+ SW+ +I + G ++AL F+ M +AK+ P+E+TF+GV
Sbjct: 473 SGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGV 532
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH G + +G ++ M+ Y + PTI+H TCV+D+LGRAG+L +A
Sbjct: 533 LTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHD 592
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
PV+WR+LLA+ R+H + + ++ A R+ +L+P +YV + NIY+ G+ IR
Sbjct: 593 EPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRD 652
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
M+++ V+K PG SWIEL+ G+H+F++ D+SHPE+ +IY++L + +++
Sbjct: 653 VMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKI 701
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 227/483 (46%), Gaps = 22/483 (4%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H++++R S +L+ Y C +A + + + N ++N +I +
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAY--CRLGGHARRLLDEMP-RTNAVSFNLLIDAYSRAG 92
Query: 114 FAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
L+ F R+ GV D++T+ + C + E K +H L G+ V++
Sbjct: 93 QPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVS 152
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++LV+ Y +C M +A +VF+ RD V WNA+V+GY + G L VF M + GI
Sbjct: 153 NSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIG 212
Query: 233 MSRFTVTGVLSALIMMG--FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
++ F + V+ VHG VVK G+DS V + +A++ MY K + EA+
Sbjct: 213 LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAV 272
Query: 291 EIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLR----LFDRMLSAGFQPDLVTFSTVLP 344
+F+ + + ++ +N+++ ++ LR L+ + S G +P TFS+V+
Sbjct: 273 ALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIR 332
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
AC+ + G+QIHG ++ + C DD F+ +AL+D+Y G M D FT
Sbjct: 333 ACNLAGDIEFGKQIHGQVLKH-------CFQGDD-FIGSALIDLYLNSGCMEDGFRCFTS 384
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ K+DV +W MI G + + AL +F + A LKPD T V++AC+ G
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTG 444
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
E + ++ G I M R+G ++ A M + + V W ++++
Sbjct: 445 -EQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESH-DIVSWSAVISSHA 502
Query: 525 LHG 527
HG
Sbjct: 503 QHG 505
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 293/485 (60%), Gaps = 8/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
++K C +L+ K H + +GL D+ + L+N Y KC ++ A +VF+E+P R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Q GE ++AL++ +M +EG S FT++ VL A +++H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+K D V V AL+D+Y K + +A+ +FE M ++ + +W+S+ + Q ++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF + G + D S+V+ AC+ LAA++ G+Q++ L+K+G C +I
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNAL-----LSKSGFCSNI--- 301
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ ++L+DMY KCG + ++ VF + K++V WN MI G + E + +F M +
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
L P++VTFV VLSAC H G + +G+++ LM + + P + HY+C++D L RAGQ+ E
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L +P A+ +W +LLA+ R HGN +LAE+AA+++F +EP + GNY+L+SN+Y A
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAA 481
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
GK++EV +R +++ +V+K G SWIE+KD +H F+ +R+HP+ IY++L+ +
Sbjct: 482 NGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDE 541
Query: 620 LREHG 624
L++ G
Sbjct: 542 LQKLG 546
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 203/381 (53%), Gaps = 11/381 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+LCA + L +G+ H+ +L G+ L+ LINMYSKC + +A VF+ + +
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP-SRS 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI N + LD M++ G ++T ++ C A+ E + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K +DL+V++ +AL++ Y KC M++A+ VFE +P R VV W++M GY Q + +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR+ + G+ +F ++ V+ A + G+ V+ ++ K G+ S + V ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + E+ ++F +E++++ WN++++ + + LF++M G P+ VT
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVV-NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
F +VL AC H+ + G++ + + LA N VF + ++D ++ G + +
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPN--------VFHYSCMVDTLSRAGQIFE 421
Query: 398 AQMVFTKMSKKDVAS-WNIMI 417
A + +K+ AS W ++
Sbjct: 422 AYDLISKLPFNASASMWGSLL 442
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 159/303 (52%), Gaps = 7/303 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF+ T + L CA + L + Q +H++ ++ + + T+L+++Y+KC MK A+
Sbjct: 162 PFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVC 221
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ + +V T+++M +G+ N+ + L F + G+ D++ +I C +
Sbjct: 222 VFESMP-DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLA 280
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A++E K+++ L+ K G ++++ S+L++ Y KC +EE+ KVF ++ R+VVLWNAM++
Sbjct: 281 AMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMIS 340
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-D 267
G ++ + + +F +M + G+ + T VLSA MG K G+ ++ K +
Sbjct: 341 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLA 400
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD----GTLR 322
V + ++D + + EA ++ + S W S++ GN + +
Sbjct: 401 PNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKK 460
Query: 323 LFD 325
LFD
Sbjct: 461 LFD 463
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 214/667 (32%), Positives = 344/667 (51%), Gaps = 55/667 (8%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L T L+ C Q +L G+ +H+ ++ I S +YSKC + A
Sbjct: 6 PLQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQT 65
Query: 89 VFNNLSCEPNVFTYNAMISGFYSND--------------------------FAFKG---- 118
F+ L+ PNVF+YN +I+ + + +A +G
Sbjct: 66 SFD-LTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRP 124
Query: 119 -LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L F +R+L D +T +I C D + + V+++H V G D + +A++
Sbjct: 125 ALRLFAEVRELRFGLDGFTLSGVIIACGDDVGL--VRQLHCFVVVCGYDCYASVNNAVLA 182
Query: 178 TYLKCQFMEEALKVFEELPL---RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
Y + F+ EA +VF E+ RD V WNAM+ Q E +A+E+FR M + G+ +
Sbjct: 183 CYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVD 242
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG---EALE 291
FT+ VL+A + G HG+++K G+ V + LID+Y K C G E +
Sbjct: 243 MFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSK--CAGGMVECRK 300
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGN--HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+FE + D+ WN++++ Q + DG + F M GF PD +F V ACS+L
Sbjct: 301 VFEEIAAPDLVLWNTMISGFSQYEDLSEDG-IWCFREMQHNGFHPDDCSFVCVTSACSNL 359
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ G+Q+H + + + N V +NNAL+ MY+KCG++ DA+ VF M + +
Sbjct: 360 SSPSVGKQVHALAIKSDIPYN-------RVSVNNALVAMYSKCGNVHDARRVFDTMPEHN 412
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+ S N MI GY G E+L +F M + + P+ +TF+ VLSAC H+G + +G+++
Sbjct: 413 MVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFN 472
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+M+ R+ + P EHY+C+ID+LGRAG+L EA + MP + W TLL A R HGN
Sbjct: 473 MMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNV 532
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+LA AA QLEP + YV++SN+Y + ++EE ++ MR++ V+K PGCSWIE+
Sbjct: 533 ELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEI 592
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DCCAGTLFDSDSTASGFEKHRL 646
+H F++ D SHP K I+ + + ++++ G D + D + E+ L
Sbjct: 593 DKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLL 652
Query: 647 YLEEVIA 653
Y E +A
Sbjct: 653 YHSEKLA 659
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 315/557 (56%), Gaps = 44/557 (7%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S +++++Y+K ++ +F+N+ +V +YN +ISGF N L F M++
Sbjct: 90 FSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSV-SYNTVISGFAGNGRGGPALGVFLRMQK 148
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G+ P +YT ++ C ++ + K+IHG + L +V++ +AL + Y +C +++
Sbjct: 149 EGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQ 208
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+ + +R+VV WN M++GY + + K +++F M + + T + VL A I
Sbjct: 209 ARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQ 268
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
G+ + EA ++F + EKD W +
Sbjct: 269 AGY-----------------------------------IDEARKVFGEIREKDEVCWTIM 293
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ Q G + L LF ML +PD T S+V+ +C+ LA+L HG+ +HG + G+
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DD+ +++AL+DMY KCG RDA +F+ M ++V SWN MI GY ++GQ
Sbjct: 354 N--------DDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDL 405
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EAL ++ M E LKPD VTFVGVLSAC H+G + +G+E+ M ++G+ PT +HY C+
Sbjct: 406 EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACM 465
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+++ GR+G +++A +L +M E N ++W T+L+ + G+ E+AA+ + +L P +
Sbjct: 466 VNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNA 525
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
Y+++SN+Y A G++++V IR M+ ++V+K SWIE+ + +H F++ DR+HP+AK
Sbjct: 526 VPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAK 585
Query: 608 SIYAELHSLTARLREHG 624
I+ +L+ L +L+E G
Sbjct: 586 IIHVQLNRLIRKLQEAG 602
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 36/327 (11%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++ L C +L++G++IH ++ + + +L ++Y++C ++ A +F
Sbjct: 154 TEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLF 213
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + NV T+N MISG+ N K +D F+ M+ + PD+ T
Sbjct: 214 DRMVIR-NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVT-------------- 258
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
S+++ Y++ +++EA KVF E+ +D V W M+ G
Sbjct: 259 ---------------------ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGC 297
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ G+ AL +F M E +T++ V+S+ + +G+VVHG MG + +
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL 357
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +AL+DMY K +A IF M+ +++ SWNS++ + G L L++ ML
Sbjct: 358 LVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQ 357
+PD VTF VL AC H + G++
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKE 444
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 39/241 (16%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ------------------ 313
+ N L+++Y K + A ++F+ M ++D FSWN++++++ +
Sbjct: 60 IHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRD 119
Query: 314 -----------CGNHDG--TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
GN G L +F RM G +P T +VL AC+ L L G+QIHG
Sbjct: 120 SVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHG 179
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
I++ L N VF+ NAL D+Y +CG + A+ +F +M ++V +WN+MI GY
Sbjct: 180 RIIICNLGGN--------VFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGY 231
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
+ Q ++ +D+F M + LKPD+VT VL A +G++ + R+ + + V T
Sbjct: 232 LKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWT 291
Query: 481 I 481
I
Sbjct: 292 I 292
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 41/181 (22%)
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM-------------------- 416
+D F++N L+++Y K G + A+ +F +M+++D SWN M
Sbjct: 56 NDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM 115
Query: 417 -----------ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
I G+ +G+G AL +F M + LKP E T V VL+AC+ L +G+
Sbjct: 116 PSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGK 175
Query: 466 EF--LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ ++ + G V + C + D+ R G++++A L M N V W +++
Sbjct: 176 QIHGRIIICNLGGNV-----FVCNALTDLYARCGEIDQARRLFDRMVIR-NVVTWNLMIS 229
Query: 522 A 522
Sbjct: 230 G 230
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 310/557 (55%), Gaps = 14/557 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+L+NMY K + A VF+ + N ++ AM++G+ + + + + F M LG
Sbjct: 157 TALLNMYCKLGLIPDAQLVFDEMP-HRNEVSWAAMVAGYAARKCSQEAFELFRQM--LGE 213
Query: 131 LP---DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
P +++ ++ + + ++HGLV K G+ V + ++LV Y K M+
Sbjct: 214 CPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDA 273
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A VFE R+ + W+AM+ GY+Q G A+ +F +M G + FT+ GVL+A
Sbjct: 274 AFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSD 333
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+G G+ HG++VK+G++ V V +AL+DMY K C+G+A E F E DI W ++
Sbjct: 334 VGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAM 393
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+T H Q G + L L+ RM G P+ +T +++L AC+ LAAL G+Q+H I+ G
Sbjct: 394 VTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGF 453
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
S + +AL MY+KCG++ D +VF +M +DV +WN +I G+ +G+G
Sbjct: 454 GLGAS--------VGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGN 505
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+A+++F M PD VTF+ VL ACSH G + +G + M YG+ P ++HY C+
Sbjct: 506 DAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACM 565
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+D+L RAG L+EA + ++ + +WR +L A R + D+ A +++ L G
Sbjct: 566 VDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDS 625
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
Y+L+SNIY A K+ +V +R+ M+ V K+PGCSW+EL +H F+ ++ HP+A+
Sbjct: 626 AAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFVVGEQQHPDAE 685
Query: 608 SIYAELHSLTARLREHG 624
I EL L +++ G
Sbjct: 686 IINTELRRLGKHMKDEG 702
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/514 (27%), Positives = 257/514 (50%), Gaps = 22/514 (4%)
Query: 29 PFTLATCIASLQLCAH---QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ--M 83
P ++ Q H + + G+ +H++ L++G SLI YS + +
Sbjct: 6 PLAFTGQVSHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFL 65
Query: 84 KYALFVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLI 141
A VF ++ + +V ++N++++ S+ L F M +LP ++F
Sbjct: 66 PAAFAVFADIPAAARDVASWNSLLNPL-SHHRPLAALSHFRSMLSSSTILPSPHSFAAAF 124
Query: 142 KCCCDVMAVLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ +H L KL +V++ +AL+N Y K + +A VF+E+P R+
Sbjct: 125 TAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNE 184
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V W AMV GYA +A E+FR+M E + + F T VLSA+ + G VHG
Sbjct: 185 VSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHG 244
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+VVK G V V N+L+ MY K C+ A +FE +E++ +W++++T + Q GN +
Sbjct: 245 LVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAES 304
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+R+F +M +AGF P T VL ACS + LM G+Q HG +V G V
Sbjct: 305 AVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQ--------V 356
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
++ +AL+DMY KCG + DA+ F + S+ D+ W M+ G+ +G+ ++AL +++ M +
Sbjct: 357 YVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKE 416
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ P+ +T +L AC+ L G++ +++ +G+ ++ + + M + G L
Sbjct: 417 GVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVG--SALSTMYSKCGNLE 474
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + MP+ + + W ++++ +G + A
Sbjct: 475 DGMVVFRRMPHR-DVIAWNSIISGFSQNGRGNDA 507
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 322/613 (52%), Gaps = 62/613 (10%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYN 103
T+LQ ++H +LR+G +L+ Y+ +AL VF+++ PNVF +N
Sbjct: 44 TSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIP-NPNVFIWN 102
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+I G N+ FK + F+ M + P+K+T+P L K C AV E ++IHG V K
Sbjct: 103 IVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKH 161
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+ DV+I SA ++ Y +E+A K+F DVV WN M++GY + G A +F
Sbjct: 162 GIGSDVHIKSAGIHMYASFGRLEDARKMFYSGE-SDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 224 RRMSKEGI--WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+M + I W N +I+
Sbjct: 221 AQMPVKNIGSW-----------------------------------------NVMINGLA 239
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
KG +G+A ++F+ M E+D SW+S++ + G + L +F +M +P S+
Sbjct: 240 KGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSS 299
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL ACS++ A+ GR +H Y+ N + D + AL+DMY KCG + V
Sbjct: 300 VLAACSNIGAIDQGRWVHAYLKRNSIKL--------DAVLGTALLDMYAKCGRLDMGWEV 351
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M ++++ +WN MI G + G+ ++AL++FS + E ++KP+ +T VGVL+AC+H+GF+
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G M YGV P +EHY C++D+LGR+G +EA +L +MP + N VW LL
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A R+HGN DLAE + + +LEP + G YVL+SNIY G++++V IR M+ + ++
Sbjct: 472 ACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTV 531
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR--EHGDCCAGTLFDSD---- 635
PG S ++L +H F D SHP+ K IY +L + RL+ H + LFD D
Sbjct: 532 PGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEK 591
Query: 636 STASGFEKHRLYL 648
TA + +L +
Sbjct: 592 ETAVNYHSEKLAI 604
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 98/208 (47%), Gaps = 6/208 (2%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F +T F L++ +A+ C++ + +G+ +H+Y+ R I + T+L++M
Sbjct: 282 FQQMQREETRPGRFILSSVLAA---CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDM 338
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y+KC ++ VF + E +FT+NAMI G + A L+ F+ +++ + P+ T
Sbjct: 339 YAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
++ C V + +I + + G+D ++ +V+ + EA + +
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 196 PLR-DVVLWNAMVNGYAQIGEFHKALEV 222
P++ + +W A++ G F A V
Sbjct: 458 PMKPNAAVWGALLGACRIHGNFDLAERV 485
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 121/273 (44%), Gaps = 26/273 (9%)
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC--GSMRDAQMVFTKMS 406
+ +L + Q+HG ++ +G D +++ AL+ Y + A VF+ +
Sbjct: 43 ITSLQYLTQLHGLVLRSG--------HFQDHYVSGALLKCYANPHFSNFDFALKVFSSIP 94
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+V WNI+I G + + +A+ + M +P++ T+ + ACS + + +GR+
Sbjct: 95 NPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQ 153
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ ++G+ + + I M G+L +A ++ + E++ V W T++
Sbjct: 154 IHGHV-VKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS--GESDVVCWNTMIDGYLKC 210
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
G + E A Q+ + G++ +M N GG + + M +++ SW
Sbjct: 211 G---VLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERD-----EISW 262
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
+ DG +IS+ R + EA I+ ++ R
Sbjct: 263 SSMVDG---YISAGR-YKEALEIFQQMQREETR 291
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 191/592 (32%), Positives = 330/592 (55%), Gaps = 9/592 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A+ ++L C + G ++H +++ G + P TSL+ MYSKC ++ A VF+
Sbjct: 257 ASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQ 316
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S + +NAMIS + N ++ GL + M+ L + PD T ++ CC V +
Sbjct: 317 VSVKKTEL-WNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDF 375
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ IH + K + +V + SAL+ Y KC ++A +F + RDVV W +M++G+ Q
Sbjct: 376 GRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQ 435
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
++ +ALE + M+ G + V+SA + G +HG+ +K G + V V
Sbjct: 436 NRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFV 495
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
++L+DMY K + +F M K++ +WNSI++ + + G D ++ LF +M G
Sbjct: 496 ASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGL 555
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD V+ ++VL + S +A L G+ +HGY++ + D+ + NAL+DMY KC
Sbjct: 556 FPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPS--------DLQLENALIDMYIKC 607
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ AQ +F M + ++ +WNIMI G G G +A+ +F M + PD++TF+ +L
Sbjct: 608 GFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLL 667
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
++C+H GF+ +G + LM +G+ P +EHY ++D+LGRAG+L++AY +P E +
Sbjct: 668 TSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPD 727
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W +LL + R+H N +L ++AA ++ +EP NYV + N+Y + ++R +
Sbjct: 728 RSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRAS 787
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+++ ++K PGCSWIE+ + + F S D S P IY L+SL +R+ G
Sbjct: 788 MKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 242/501 (48%), Gaps = 13/501 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
P + CI L A +L ++IH Y +R P + LI MY C + A
Sbjct: 153 RPDAYSLCIL---LGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAW 209
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F L + NV +N MI GF N L+ + + V +F + CC
Sbjct: 210 RLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQG 269
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
V ++H + KLG + D Y+ ++L+ Y KC+ +E+A VF+++ ++ LWNAM+
Sbjct: 270 EFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMI 329
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
+ Y G + L+++++M I T T VLS+ ++G + GR++H +VK
Sbjct: 330 SAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQ 389
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V + +AL+ MY K +A IF ++ +D+ +W S+++ Q + L ++ M
Sbjct: 390 SNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSM 449
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +PD ++V+ AC+ L + G IHG + +GL + DVF+ ++L+D
Sbjct: 450 TVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQ--------DVFVASSLVD 501
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+K + + VF+ M K++ +WN +I Y +G ++ +FS M + L PD V+
Sbjct: 502 MYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVS 561
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
VL + S L +G+ + R + ++ +IDM + G L A + M
Sbjct: 562 ITSVLVSVSSVAVLRKGKAVHGYL-IRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNM 620
Query: 508 PNEANPVVWRTLLAASRLHGN 528
+ N V W ++A HG+
Sbjct: 621 L-QTNLVTWNIMIAGCGSHGD 640
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 211/424 (49%), Gaps = 16/424 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDS-PLSITSLINMYSKCCQMKYALFVFNNLS--- 94
L+ C +NLQ G+ IHS ++ G S P TSLIN Y KC A+ VF+ L
Sbjct: 56 LKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESE 115
Query: 95 -CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V +N++++G++ +G+ F M+ GV PD Y+ L+ +
Sbjct: 116 VSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGY--A 173
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQ 212
K+IHG + D ++ S L+ Y C +A ++F+EL + +VV WN M+ G+ +
Sbjct: 174 KQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGE 233
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + +LEV+ E + + + T LSA F G VH +VK+G+++ V
Sbjct: 234 NGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYV 293
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+L+ MY K K V +A +F+ + K WN++++ + G L+++ +M
Sbjct: 294 CTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQI 353
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD +T + VL +C + + GR IH +V + N V + +AL+ MY+KC
Sbjct: 354 PPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSN--------VALQSALLTMYSKC 405
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G+ DA +F + +DV +W MI G+ + + EAL+ ++ M KPD V+
Sbjct: 406 GNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVV 465
Query: 453 SACS 456
SAC+
Sbjct: 466 SACT 469
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 168/341 (49%), Gaps = 21/341 (6%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVF 192
++T+P L+K C + + K IH + G D YI ++L+N Y KC A+KVF
Sbjct: 49 RFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVF 108
Query: 193 EELPL-----RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
++LP +DV WN++VNGY + G + + F RM G+ +++ +L A
Sbjct: 109 DKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGA--S 166
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNS 306
G + +HG V+ + + + LI MY +A +F+ +E+K ++ +WN
Sbjct: 167 DGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNV 226
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV--TFSTVLPACSHLAALMHGRQIHGYIVV 364
++ + G + +L ++ +L+ LV +F++ L AC + G Q+H +V
Sbjct: 227 MIGGFGENGLWENSLEVY--LLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVK 284
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G +D ++ +L+ MY+KC + DA+ VF ++S K WN MI Y +G
Sbjct: 285 LGFE--------NDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNG 336
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+ + L ++ M ++ PD +T VLS+C G GR
Sbjct: 337 RSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGR 377
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 215/478 (44%), Gaps = 47/478 (9%)
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
F+++ + L D++ + + Q G++ AL+ + S+ + +RFT +L
Sbjct: 3 FIQQISRKLSNLAHSDLI--DPKIVTLVQQGQYVDALQFY---SRNPLNATRFTYPSLLK 57
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVP-VMNALIDMYGKGKCVGEALEIFEMMEE---- 298
A + + G+ +H ++ G+ P + +LI+ Y K G A+++F+ + E
Sbjct: 58 ACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVS 117
Query: 299 -KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+D+ WNSI+ + + G+ + F RM G +PD + +L A L + +Q
Sbjct: 118 GQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--GHLGYAKQ 175
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIM 416
IHGY V D F+ + L+ MY CG DA +F ++ K +V +WN+M
Sbjct: 176 IHGYSVRKVF--------YGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVM 227
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRY 475
I G+G +G + +L+++ +K +F LSAC F+S G + L++ +
Sbjct: 228 IGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGF 287
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT-DLAEI 534
P + T ++ M + +L E E + +W +++A +G + D +I
Sbjct: 288 ENDPYV--CTSLLTMYSKC-KLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKI 344
Query: 535 AAQ-RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
Q +V Q+ P ++S+ + G D + + V++ P S + L+ L
Sbjct: 345 YKQMKVLQIPPDSLTATNVLSSCCLVGS-----YDFGRLIHAELVKR-PIQSNVALQSAL 398
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKHRLYLEEV 651
T S + +A SI+ +++ R D A S SGF ++R Y+E +
Sbjct: 399 LTMYSKCGNSDDANSIF---NTIKGR-----DVVAW-----GSMISGFCQNRKYMEAL 443
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 177/492 (35%), Positives = 291/492 (59%), Gaps = 10/492 (2%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + L+ C D A+ E +++H + K Y+ + L+ Y KC +E+A KV +E
Sbjct: 52 HCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 111
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P ++VV W AM++ Y+Q G +AL VF M + + FT VL++ I G
Sbjct: 112 MPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALG 171
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +HG++VK YDS + V ++L+DMY K + EA EIFE + E+D+ S +I+ + Q
Sbjct: 172 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQL 231
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L +F R+ S G +P+ VT++++L A S LA L HG+Q H +++ L
Sbjct: 232 GLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA--- 288
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ N+L+DMY+KCG++ AQ +F M ++ SWN M++GY G G+E L++F
Sbjct: 289 -----VLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 343
Query: 435 CMC-EAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLG 492
M E ++KPD VT + VLS CSH G ++ YG+ P EHY C++DMLG
Sbjct: 344 LMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLG 403
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG+++EA+E MP++ V +LL A R+H + D+ E R+ ++EP + GNYV+
Sbjct: 404 RAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVI 463
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SN+Y + G++E+V ++R M Q+ V K PG SWI+ + LH F ++DR+HP + + A+
Sbjct: 464 LSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAK 523
Query: 613 LHSLTARLREHG 624
+ ++ ++++ G
Sbjct: 524 MKEISIKMKQAG 535
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 187/376 (49%), Gaps = 8/376 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L C + L++GQ +H++M++T + + T L+ Y KC ++ A V + + E
Sbjct: 56 ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-E 114
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++ AMIS + + + L F M + P+++TF ++ C + K+I
Sbjct: 115 KNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQI 174
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGL+ K D +++GS+L++ Y K +EEA ++FE LP RDVV A++ GYAQ+G
Sbjct: 175 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLD 234
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F+R+ EG+ + T +L+AL + +G+ H V++ + N+L
Sbjct: 235 EEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 294
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPD 335
IDMY K + A +F+ M E+ SWN+++ + + G L LF M +PD
Sbjct: 295 IDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 354
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT VL CSH G I+ +V G D ++DM + G +
Sbjct: 355 AVTLLAVLSGCSHGKMEDTGLSIYDGMVA------GEYGIKPDTEHYGCIVDMLGRAGRI 408
Query: 396 RDAQMVFTKMSKKDVA 411
+A +M K A
Sbjct: 409 DEAFEFIKRMPSKPTA 424
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 188/558 (33%), Positives = 314/558 (56%), Gaps = 11/558 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C ++++G IH + + GI + L++MY K + +F+ +
Sbjct: 223 LRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 282
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N MI G+ + + F M PD T +++ C + + K +H
Sbjct: 283 V-SWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHD 340
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G + D + L+N Y KC + + +VF + +D V WN+M+N Y Q G F +
Sbjct: 341 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDE 400
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+++F+ M K + T +LS +G G+ +H + KMG++S + V N L+D
Sbjct: 401 AMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVD 459
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +G++L++FE M+ +DI +WN+I+ + + LR+ RM + G PD+ T
Sbjct: 460 MYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT 519
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++LP CS LAA G++IHG I GL DV + N L++MY+KCGS+R++
Sbjct: 520 MLSILPVCSLLAAKRQGKEIHGCIFKLGLES--------DVPVGNVLIEMYSKCGSLRNS 571
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF M KDV +W +I GM G+GK+A+ F M A + PD V FV ++ ACSHS
Sbjct: 572 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 631
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G + M+ Y + P IEHY CV+D+L R+ L++A + L+MP + + +W
Sbjct: 632 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 691
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ G+T++AE ++R+ +L P G YVL+SNIY A GK+++V IR +++ + +
Sbjct: 692 LLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGL 751
Query: 579 RKNPGCSWIELKDGLHTF 596
+K+PGCSW+E+++ ++ F
Sbjct: 752 KKDPGCSWMEIQNKVYVF 769
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 270/493 (54%), Gaps = 16/493 (3%)
Query: 31 TLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
TL + I+ +L A T L K +HS ++ G+ S + LI Y+ + V
Sbjct: 14 TLFSSISRALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSV 70
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F S NV+ +N++I N + L ++ +++ + PD YTFP +I C ++
Sbjct: 71 FRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 130
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
K IH V +G D+YIG+AL++ Y + +++A KVFEE+PLRDVV WN++++G
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y G +++ALE++ R G+ +T++ VL A +G + G ++HG++ K+G
Sbjct: 191 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 250
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V N L+ MY K + + IF+ M +D SWN+++ + Q G ++ +++LF M++
Sbjct: 251 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 310
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
F+PDL+T +++L AC HL L G+ +H Y++ +G C D +N L++MY
Sbjct: 311 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY----EC----DTTASNILINMY 361
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG++ +Q VF+ M KD SWN MI Y +G EA+ +F M + +KPD VT+V
Sbjct: 362 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYV 420
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LS + G L G+E L ++ G I ++DM + G++ ++ ++ M
Sbjct: 421 MLLSMSTQLGDLHLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 479
Query: 510 EANPVVWRTLLAA 522
+ + W T++A+
Sbjct: 480 R-DIITWNTIIAS 491
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 172/324 (53%), Gaps = 2/324 (0%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + LQ C H +L+ G+ +H YM+ +G + LINMY+KC + + VF+
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 375
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ C+ +V ++N+MI+ + N + + F M+ V PD T+ L+ + +
Sbjct: 376 GMKCKDSV-SWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLH 433
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H + K+G + ++ + + LV+ Y KC M ++LKVFE + RD++ WN ++
Sbjct: 434 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCV 493
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ + L + RM EG+ T+ +L ++ + G+ +HG + K+G +S VP
Sbjct: 494 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 553
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N LI+MY K + + ++F++M+ KD+ +W ++++ G +R F M +AG
Sbjct: 554 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 613
Query: 332 FQPDLVTFSTVLPACSHLAALMHG 355
PD V F ++ ACSH + G
Sbjct: 614 IVPDHVAFVAIIFACSHSGLVEEG 637
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 199/413 (48%), Gaps = 17/413 (4%)
Query: 125 MRQLGVLPD---KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
M+ L VL + + F + + ++ K+H L+ LGL V + L+ Y
Sbjct: 1 MKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH 60
Query: 182 CQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
+ + VF P +V LWN+++ G F +AL ++ + + +T
Sbjct: 61 FRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPS 120
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
V++A + F+ + +H V+ MG+ S + + NALIDMY + + +A ++FE M +D
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+ SWNS+++ + G + L ++ R + G PD T S+VL AC L ++ G IHG
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 240
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
I G+ K DV +NN L+ MY K + D + +F KM +D SWN MI GY
Sbjct: 241 LIEKIGIKK--------DVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGY 292
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM-ESRYGVVP 479
G +E++ +F M + KPD +T +L AC H G L G+ M S Y
Sbjct: 293 SQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDT 351
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
T + +I+M + G L + E+ M + + V W +++ +G+ D A
Sbjct: 352 TASN--ILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEA 401
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 202/594 (34%), Positives = 324/594 (54%), Gaps = 69/594 (11%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ Y K + A +FN + E +V ++NAM+SGF N F + F+ M
Sbjct: 123 ISWNVMLSGYVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFAQNGFVEEARKIFDQM-- 179
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
++ ++ ++ L+ + + +++ F +D ++ + L+ Y++ + +++
Sbjct: 180 --LVKNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+ +P+RD + WN M+ GYAQ G +A +F + + F T ++S
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAMVS---- 285
Query: 248 MGFFKNGRVVHG--IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
GF +NG + I +M + V NA+I Y + + + +A E+F+ M ++ SWN
Sbjct: 286 -GFVQNGMLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN 343
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV----------------------- 342
+++T + QCGN D LFD M Q D ++++ +
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 343 ------------LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
L +C+ +AAL G+Q+HG +V G NAL+ MY
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG--------YIAGNALLAMYG 451
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ +A VF +++KD+ SWN MI GY G GKEAL +F M + +KPD+VT VG
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH+GF+ +G E+ M YG+ +HYTC+ID+LGRAG+L+EA L +MP
Sbjct: 511 VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ W LL ASR+HG+T+L E AA++VF++EP + G YVL+SN+Y A G++ EV ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + V+K PG SW+E+++ H F D SHPEA+ IYA L L L++ G
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 214/492 (43%), Gaps = 66/492 (13%)
Query: 52 QEIHSYMLRTGIIDSPL-SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
Q++ S + I+DS + I+ Y + Q + AL VFN + V TYNAMISG+
Sbjct: 44 QKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-TYNAMISGYL 102
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
SN+ F C K VF+ D D+
Sbjct: 103 SNN----------------------KFDCARK-----------------VFEKMPDRDLI 123
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +++ Y+K + A +F ++P +DVV WNAM++G+AQ G +A ++F +M
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + + G+LSA + G ++ R + KM ++ + N L+ Y + K + +A
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFD--SKMDWE--IVSWNCLMGGYVRKKRLDDAR 235
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------MLSAGFQPDLVTF 339
+F+ M +D SWN ++T + Q G RLF+ M+S Q ++
Sbjct: 236 SLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDE 295
Query: 340 ST-VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD---IDDVFMNNALMDMYTKCGSM 395
+T + + I GY+ + K D + N ++ Y +CG++
Sbjct: 296 ATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNI 355
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+++F +M ++D SW MI GY GQ +EAL +F M + LS+C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ L G++ + + G ++ M G+ G + EA+++ E + V
Sbjct: 416 AEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGSIEEAFDV-FEDITEKDIVS 473
Query: 516 WRTLLAASRLHG 527
W T++A HG
Sbjct: 474 WNTMIAGYARHG 485
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L CA L+ G+++H +++ G ++ +L+ MY KC ++ A VF +++ E
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EK 469
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKI 156
++ ++N MI+G+ + F + L F M+ + + PD T ++ C V + ++
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYF 528
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAM-----VNGY 210
+ + G+ + + +++ + ++EAL + + +P D W A+ ++G
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588
Query: 211 AQIGE 215
++GE
Sbjct: 589 TELGE 593
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 328/602 (54%), Gaps = 11/602 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA L +G+ H+ +++ G+ + SL+ +Y+K + A VF+ + +
Sbjct: 127 LKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPAR-D 185
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++N M+ G+ SN L F M L V D + CC A+ ++IH
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + GL+ DV +G++LV+ Y KC + A VF ++PLR VV WN M+ GYA
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV 305
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A + F +M +G + T +L+A GR VH VV+ + V + AL+
Sbjct: 306 DAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+MYGK V + +IF + +K + SWN+++ + + + LF +L+ PD
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYF 425
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +TV+PA L ++ +Q+H YIV G D + NA+M MY +CG++
Sbjct: 426 TMTTVVPAFVLLGSIRQCKQMHSYIVKLGYG--------DSTLIMNAVMHMYARCGNIVA 477
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ +F KM KDV SWN +I+GY + GQGK AL+MF M + ++P+E TFV VL+ACS
Sbjct: 478 SREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSV 537
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG ++G + M+ YG++P IEHY C+ D+LGRAG+L E MP +W
Sbjct: 538 SGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWG 597
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL ASR + D+AE AA+R+FQLE + G YV++S++Y G++E+V IR M+++
Sbjct: 598 SLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKG 657
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDST 637
+R+ S +EL + +F++ D SHP+++ I+ L+ + E D + L DSD
Sbjct: 658 LRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDLD-SSSNLRDSDPF 716
Query: 638 AS 639
AS
Sbjct: 717 AS 718
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 217/463 (46%), Gaps = 14/463 (3%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
SLI + +M A F ++ P F +N MI GF D L + M G
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVT-RPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGAR 117
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD++TFP ++KCC A+ E + H V KLGL DVY ++LV Y K + +A +V
Sbjct: 118 PDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGF 250
F+ +P RD+V WN MV+GY G AL FR M+ + V L+A +
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESA 237
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
GR +HG ++ G + V V +L+DMY K V A +F M + + +WN ++
Sbjct: 238 LALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ F +M GFQ ++VT +L AC+ + + GR +H Y+V
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHF--- 354
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+ V + AL++MY K G + ++ +F +++ K + SWN MI Y +EA+
Sbjct: 355 -----LPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAI 409
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVID 489
+F + L PD T V+ A G + Q ++ +++ YG I V+
Sbjct: 410 ALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLI--MNAVMH 467
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
M R G + + E+ MP + + + W T++ +HG +A
Sbjct: 468 MYARCGNIVASREIFDKMPGK-DVISWNTIIIGYAIHGQGKIA 509
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 179/362 (49%), Gaps = 8/362 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA+L C ++ L G+EIH Y +R G+ TSL++MY KC + +A VF +
Sbjct: 226 IAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPL 285
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+N MI G+ N+ D F MR G + T L+ C + L +
Sbjct: 286 R-TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRS 344
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H V + V + +AL+ Y K +E + K+F ++ + +V WN M+ Y +
Sbjct: 345 VHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEM 404
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +A+ +F + + ++ FT+T V+ A +++G + + +H +VK+GY +MNA
Sbjct: 405 YQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNA 464
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ MY + + + EIF+ M KD+ SWN+I+ + G L +FD M +G +P+
Sbjct: 465 VMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPN 524
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
TF +VL ACS + G + G+ N + + I + + D+ + G +
Sbjct: 525 ESTFVSVLTACS-----VSGLEAEGWKEFNSMQQEYGM--IPQIEHYGCMTDLLGRAGEL 577
Query: 396 RD 397
R+
Sbjct: 578 RE 579
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 139/292 (47%), Gaps = 9/292 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T I L CA + G+ +H+Y++R + + T+L+ MY K +++ + +F
Sbjct: 323 VVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFG 382
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + + ++N MI+ + + + + F + + PD +T ++ + ++
Sbjct: 383 QIT-DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIR 441
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K++H + KLG I +A+++ Y +C + + ++F+++P +DV+ WN ++ GYA
Sbjct: 442 QCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYA 501
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ ALE+F M G+ + T VL+A + G G + + + + G +
Sbjct: 502 IHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQI 561
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS----WNSIMTVHEQCGNHD 318
+ D+ G+ GE E+ +E I W S++T + D
Sbjct: 562 EHYGCMTDLLGRA---GELREVLRFIENMPIAPTSRIWGSLLTASRNKNDID 610
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 328/599 (54%), Gaps = 24/599 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + + Q+IH+++++TG +T L+N+Y+KC M+ A VF+ L N
Sbjct: 76 LQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELP-RRN 134
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ +++G+ + + F M + G P YT + D+ + K+IHG
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHG 194
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K ++ D IG++L + Y KC +E A+K F + ++V+ W +++ + GE
Sbjct: 195 YSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAAT 254
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L+ F M E + + FT+T LS +M G +H + +K+G++S +P+ N+++
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMY 314
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH-------------EQCGNHDGTLRLFD 325
+Y K + EA ++F+ ME + +WN+++ H QCG L +F
Sbjct: 315 LYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTE--ALSIFL 372
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
++ +G +PDL TFS+VL CS L AL G Q+H + G + DV + AL
Sbjct: 373 KLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGF--------LSDVVVGTAL 424
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
++MY KCGS+ A F +MS + + SW MI GY +GQ ++AL +F M A ++P++
Sbjct: 425 VNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNK 484
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TFVGVLSACSH+G + + ++ +M++ Y + P ++HY C+IDM R G+L+EA++
Sbjct: 485 ITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIK 544
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
M E N +W L+A R G +L AA+++ L+P Y L+ N+Y++ GK++E
Sbjct: 545 EMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKE 604
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V +R M+++ + + SWI +KD +++F + RSH ++ +Y L +L + + G
Sbjct: 605 VSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKSFG 663
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 205/428 (47%), Gaps = 25/428 (5%)
Query: 119 LDF---FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
LDF + +R+ + + P +++ C D V + +KIH + K G D ++ + L
Sbjct: 52 LDFREALSFIREGTKVESAFYVP-ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFL 110
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
VN Y KC ME A KVF+ELP R+VV W ++ GY + A++VFR M + G + +
Sbjct: 111 VNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTN 170
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
+T+ LSA + + G+ +HG +K + + N+L +Y K + A++ F
Sbjct: 171 YTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRR 230
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ +K++ SW ++++ G L+ F MLS +P+ T ++ L C + +L G
Sbjct: 231 IRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIG 290
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
QIH + G N K N++M +Y KCG + +A+ +F +M + +WN
Sbjct: 291 TQIHSLTIKLGFESNLPIK--------NSIMYLYLKCGWIHEAKKLFDEMETISLVTWNA 342
Query: 416 MILGYG--MDGQ---------GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
MI G+ MD G EAL +F + + +KPD TF VLS CS L QG
Sbjct: 343 MIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQG 402
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
E + + G + + T +++M + G + A + + M + W +++
Sbjct: 403 -EQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIR-TLISWTSMITGYA 460
Query: 525 LHGNTDLA 532
+G A
Sbjct: 461 QNGQPQQA 468
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 153/291 (52%), Gaps = 20/291 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T ++L LC +L G +IHS ++ G +S L I S++ +Y KC + A +F+
Sbjct: 273 TLTSALSLCCVMQSLDIGTQIHSLTIKLG-FESNLPIKNSIMYLYLKCGWIHEAKKLFDE 331
Query: 93 LSCEPNVFTYNAMISG------FYSNDFA-----FKGLDFFNHMRQLGVLPDKYTFPCLI 141
+ ++ T+NAMI+G F +D A + L F + + G+ PD +TF ++
Sbjct: 332 MET-ISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVL 390
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
C ++A+ + +++H K G DV +G+ALVN Y KC +E A K F E+ +R ++
Sbjct: 391 SVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLI 450
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W +M+ GYAQ G+ +AL +F M G+ ++ T GVLSA G + + +
Sbjct: 451 SWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEA-LDYFQM 509
Query: 262 VKMGYDSGVPVMN---ALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIM 308
+K Y PVM+ LIDM+ + + EA + I EM E + F W+ ++
Sbjct: 510 MKNEYKI-TPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILI 559
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 309/560 (55%), Gaps = 14/560 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALF 88
FTLAT L+ C + G+ +H Y ++ G DS L ++ S + MY KC + A
Sbjct: 147 FTLATV---LKACGGLGCSRIGKCVHGYAVKIGF-DSDLFVSGSTVYMYCKCGILDMAGL 202
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F+ + ++ +N MI+G+ N + + ++ F M G P+ TF C++K +
Sbjct: 203 AFDQIE-NKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMS 261
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ H V KLG +DV++ +ALV+ Y K +E+ + F E+ R++V +NA++
Sbjct: 262 DSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALIT 321
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+ +G++ +AL V+ ++ EG+ FT G+ S+ + G VH VK G DS
Sbjct: 322 GYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDS 381
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V N++++ Y K ALE FE + + W I++ Q G + L F +M
Sbjct: 382 DVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMR 441
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ D + S+V+ A S AA+ GR +H +++ +GL C +++ +A++DM
Sbjct: 442 KFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGL----DCT----IYVGSAVIDM 493
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCG + DAQ VF+ M +K+V SWN MI GY +G KEAL +F M + + P VTF
Sbjct: 494 YSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTF 553
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VG+L ACSH+G + +GR F LM YG+ P++EH TC++D+LGRAG L EA L+
Sbjct: 554 VGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSS 613
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
P +W +LL+A +H N+D+ AAQ LEP + +Y +SNIY + + EV
Sbjct: 614 FSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSR 673
Query: 569 IRHTMRQQNVRKNPGCSWIE 588
IR M+ V K PGCSWIE
Sbjct: 674 IRDLMKDMGVEKEPGCSWIE 693
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 247/496 (49%), Gaps = 17/496 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++ CA T +H +L+ G + + LI+MYSK ++K A F+F+++ E
Sbjct: 46 ATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMP-E 104
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFF----NHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ ++N+MI+G+ + F N +L +T ++K C +
Sbjct: 105 RDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRI 164
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +HG K+G D D+++ + V Y KC ++ A F+++ +D+V WN M+ GYAQ
Sbjct: 165 GKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQ 224
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+A+E+F +M EG + T VL A M GR H V+K+G V V
Sbjct: 225 NCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFV 284
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+DMY K + + F M ++++ S+N+++T + G ++ LR++ ++ S G
Sbjct: 285 ATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGM 344
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD TF + +CS + + G Q+H + V GL DV + N++++ Y+KC
Sbjct: 345 EPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDS--------DVSVGNSIVNFYSKC 396
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G A F +++ + W +I G+ +G+G++AL F M + K DE + V+
Sbjct: 397 GFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVI 456
Query: 453 SACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
A S + QGR +M+S G+ TI + VIDM + G + +A ++ MP E
Sbjct: 457 KAVSSWAAVEQGRHLHAHVMKS--GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EK 513
Query: 512 NPVVWRTLLAASRLHG 527
N V W +++ +G
Sbjct: 514 NVVSWNSMITGYAQNG 529
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 227/451 (50%), Gaps = 16/451 (3%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E NV + + I+ + L F M + G+ P+ T+ I C
Sbjct: 3 ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H L+ K G +++ S L++ Y K ++EA +F+++P RD V WN+M+ GY+Q G
Sbjct: 63 LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122
Query: 216 FHKALEVFRRM----SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+A +F M + +S FT+ VL A +G + G+ VHG VK+G+DS +
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + + MY K + A F+ +E KDI +WN+++T + Q + + LF +M G
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
F+P+ TF VL A + ++ GR H ++ G + DVF+ AL+DMY+K
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSM--------DVFVATALVDMYSK 294
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
+ D + F +MSK+++ S+N +I GY + G+ +EAL ++S + ++PD TFVG+
Sbjct: 295 FYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGL 354
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
S+CS S +++G + + + ++G+ + +++ + G + A E A N
Sbjct: 355 FSSCSVSSTVAEGAQ-VHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALE-AFESINRP 412
Query: 512 NPVVWRTLLA--ASRLHGNTDLAEIAAQRVF 540
N V W +++ A G L + R F
Sbjct: 413 NSVCWAGIISGFAQNGEGEKALMQFCKMRKF 443
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 27/257 (10%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M E ++ W S +T + + G D L F +ML AG +P+ +T+S + AC+
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+H I+ G + + +F+++ L+ MY+K +++A+ +F M ++D SWN
Sbjct: 61 TSLHCLILKKGFS--------NQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNS 112
Query: 416 MILGYGMDGQGKEALDMFSCM---CEA-KLKPDEVTFVGVLSA-----CSHSGFLSQGRE 466
MI GY G +EA +F M CE KL + T VL A CS G G
Sbjct: 113 MIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYA 172
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+S V + + C +L AG LA + V W T++ +
Sbjct: 173 VKIGFDSDLFVSGSTVYMYCKCGILDMAG-------LAFDQIENKDIVAWNTMITG---Y 222
Query: 527 GNTDLAEIAAQRVFQLE 543
E A + +Q+E
Sbjct: 223 AQNCYEEEAIELFYQME 239
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 335/607 (55%), Gaps = 25/607 (4%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ +L+ G+ +H+ + G+ + SL +MY+ C +M A VF+ E + +
Sbjct: 113 CSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAE-EHDDVS 171
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE--VKKIHGL 159
+N+++SG+ + L F+ M G+ + + +IKCC V + +HG
Sbjct: 172 WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGC 231
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY----AQIGE 215
V K GLD D+++ SA+++ Y K + A+ +F+ +P +V+++NAM+ G+ A +G+
Sbjct: 232 VVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGK 291
Query: 216 --FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+AL ++ M G+ S FT + +L A + G F G+ +HG V+K + +
Sbjct: 292 EVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIG 351
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+ALID+Y C+ + F + ++DI +W S+++ Q + LRLF + G +
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLK 411
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PDL T S+V+ AC+ LA G QI + G + + M N+ + M + G
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTA--------MGNSFIHMCARSG 463
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ F +M +DV SW+ +I + G ++AL +F+ M AK+ P+EVTF+ VL+
Sbjct: 464 DVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLT 523
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSH G + G + +M++ YG+ PTI+H TCV+D+LGRAG+L +A +
Sbjct: 524 ACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDA 583
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VVWR+LLA+ R+HG+ + ++ A ++ LEP +YV++ N+Y+ G+ R M
Sbjct: 584 VVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLM 643
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFD 633
+++ V+K PG SWIEL+ G+H+F++ D+SHPE+ +IY +L + +++ + L +
Sbjct: 644 KERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEK--------LAN 695
Query: 634 SDSTASG 640
+D+ ++G
Sbjct: 696 TDNASTG 702
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 170/318 (53%), Gaps = 9/318 (2%)
Query: 39 LQLCAHQTNLQK--GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ CA +++ + + +H +++ G+ +++I+MY+K + A+ +F ++ +
Sbjct: 211 IKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVP-D 269
Query: 97 PNVFTYNAMISGFYSNDFAF------KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
PNV +NAMI+GF ++ A + L ++ M+ G+ P ++TF +++ C
Sbjct: 270 PNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEF 329
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K+IHG V K D YIGSAL++ Y ME+ + F LP +D+V W +M++G
Sbjct: 330 GFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGC 389
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q F KAL +F+ G+ FT++ V++A + + G + + +K G++
Sbjct: 390 VQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFT 449
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ N+ I M + V F+ ME +D+ SW+++++ H Q G LR+F+ M++A
Sbjct: 450 AMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNA 509
Query: 331 GFQPDLVTFSTVLPACSH 348
P+ VTF VL ACSH
Sbjct: 510 KVAPNEVTFLNVLTACSH 527
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/515 (24%), Positives = 223/515 (43%), Gaps = 48/515 (9%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGI--------IDSPLSITSLINMYSKCCQM 83
L +C A + A ++ + S LR + + +PL LI+ +
Sbjct: 9 LRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR---- 64
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIK 142
N +YN +IS + + L+ F G+ D++T+ +
Sbjct: 65 -------------RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALA 111
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + + K +H + GL V++ ++L + Y C M EA +VF+ D V
Sbjct: 112 ACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVS 171
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN--GRVVHGI 260
WN++++GY + G + L+VF M G+ + F + ++ VHG
Sbjct: 172 WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGC 231
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM--------TVHE 312
VVK G D+ + + +A+IDMY K + A+ +F+ + + ++ +N+++ V +
Sbjct: 232 VVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGK 291
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ L L+ M S G QP TFS++L AC+ G+QIHG ++ +
Sbjct: 292 EVSRE--ALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFH---- 345
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DD ++ +AL+D+Y+ G M D F + K+D+ +W MI G + ++AL +
Sbjct: 346 ----DDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRL 401
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F LKPD T V++AC+ G E + + +YG I M
Sbjct: 402 FQESICYGLKPDLFTMSSVMNACASLAVARTG-EQIQCLAIKYGFNRFTAMGNSFIHMCA 460
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
R+G ++ M + + V W ++++ HG
Sbjct: 461 RSGDVDAVTRRFQEMESR-DVVSWSAVISSHAQHG 494
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 196/403 (48%), Gaps = 44/403 (10%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME--EALKVFEELPL 197
L++ C A+ V +H + + +++ ++L+ Y + A ++ +E+P
Sbjct: 8 LLRSC---TALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRV 256
R+ V +N +++ Y++ G +ALE F R G+ + RFT L+A + G+
Sbjct: 65 RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA 124
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH + V G +GV + N+L MY +GEA +F+ EE D SWNS+++ + + G
Sbjct: 125 VHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGA 184
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI----HGYIVVNGLAKNGS 372
+ TL++F M G + +++ C+ + + GR I HG +V GL
Sbjct: 185 REETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDV--GRHIAEAVHGCVVKAGLDA--- 239
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG------ 426
D+F+ +A++DMY K G++ +A +F + +V +N MI G+ D
Sbjct: 240 -----DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVS 294
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY-- 484
+EAL ++S M ++P E TF +L AC+ +G G++ +G V ++H
Sbjct: 295 REALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQI-------HGQV--LKHSFH 345
Query: 485 ------TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ +ID+ +G + + Y ++P + + V W ++++
Sbjct: 346 DDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQ-DIVTWTSMIS 387
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 173/485 (35%), Positives = 293/485 (60%), Gaps = 8/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
++K C +L+ K H + +GL D+ + L+N Y KC ++ A +VF+E+P R
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Q GE ++AL++ +M +EG S FT++ VL A +++H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+K D V V AL+D+Y K + +A+ +FE M ++ + +W+S+ + Q ++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF + G + D S+V+ AC+ LAA++ G+Q++ L+K+G C +I
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNAL-----LSKSGFCSNI--- 301
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ ++L+DMY KCG + ++ VF + K++V WN MI G + E + +F M +
Sbjct: 302 FVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQM 361
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
L P++VTFV VLSAC H G + +G+++ LM + + P + HY+C++D L RAGQ+ E
Sbjct: 362 GLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFE 421
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L +P A+ +W +LLA+ R HGN +LAE+AA+++F +EP + GNY+L+SN+Y A
Sbjct: 422 AYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAA 481
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
GK++EV +R +++ +V+K G SWIE+KD +H F+ +R+HP+ IY++L+ +
Sbjct: 482 NGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDE 541
Query: 620 LREHG 624
L++ G
Sbjct: 542 LQKLG 546
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 203/381 (53%), Gaps = 11/381 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+LCA + L +G+ H+ +L G+ L+ LINMYSKC + +A VF+ + +
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSR-S 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI N + LD M++ G ++T ++ C A+ E + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K +DL+V++ +AL++ Y KC M++A+ VFE +P R VV W++M GY Q + +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR+ + G+ +F ++ V+ A + G+ ++ ++ K G+ S + V ++LID
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + E+ ++F +E++++ WN++++ + + LF++M G P+ VT
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVV-NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
F +VL AC H+ + G++ + + LA N VF + ++D ++ G + +
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPN--------VFHYSCMVDTLSRAGQIFE 421
Query: 398 AQMVFTKMSKKDVAS-WNIMI 417
A + +K+ AS W ++
Sbjct: 422 AYDLISKLPFNASASMWGSLL 442
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 159/303 (52%), Gaps = 7/303 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF+ T + L CA + L + Q +H++ ++ + + T+L+++Y+KC MK A+
Sbjct: 162 PFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVC 221
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ + +V T+++M +G+ N+ + L F + G+ D++ +I C +
Sbjct: 222 VFESMP-DRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLA 280
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A++E K+++ L+ K G ++++ S+L++ Y KC +EE+ KVF ++ R+VVLWNAM++
Sbjct: 281 AMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMIS 340
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-D 267
G ++ + + +F +M + G+ + T VLSA MG + G+ ++ K +
Sbjct: 341 GLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLA 400
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD----GTLR 322
V + ++D + + EA ++ + S W S++ GN + +
Sbjct: 401 PNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKK 460
Query: 323 LFD 325
LFD
Sbjct: 461 LFD 463
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 199/586 (33%), Positives = 317/586 (54%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y K + +AL +F+++ E +V ++N M+S + + LD M+ GV
Sbjct: 229 SMLAGYVKTYGVDHALELFDSMP-ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SALV Y K +EA V
Sbjct: 288 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 347
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W +++G+ Q G F +++E+F +M E + + +F + ++S
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 407
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G V V N+LI MY K + A IF M EKDI SW S++T +
Sbjct: 408 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAY 467
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLSAGF-QPDLVT 338
Q GN DG LR++ MLS + +PD VT
Sbjct: 468 SQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG-LRMYKVMLSEEYVRPDWVT 526
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ L A G QI G V GL I D + NA++ MY+KCG + +A
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGL--------IIDTSVANAVITMYSKCGRILEA 578
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF ++ KD+ SWN MI GY G GK+A+++F + + KPD +++V VLS CSHS
Sbjct: 579 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 638
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M+ + + P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 639 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 698
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+LM+ IY GK ++ IR MR + +
Sbjct: 699 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 758
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+ + +H F + D SHP+ +I +L L ++ G
Sbjct: 759 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 804
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 41/359 (11%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA ++L+ G+++H+ ++R P ++L+ +Y+K K A VFN+L
Sbjct: 292 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 351
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV + +ISGF + ++ FN MR + D++ LI CC M +
Sbjct: 352 HDRNNV-AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 410
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G V + ++L++ Y KC ++ A +F + +D+V W +M+ Y+Q+
Sbjct: 411 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 470
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG------------------------ 249
G KA E F MS++ + T +L A I G
Sbjct: 471 GNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526
Query: 250 ---FFKN---------GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
FK G + G VK+G V NA+I MY K + EA ++F+ +
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
KDI SWN+++T + Q G + +FD +L G +PD +++ VL CSH + G+
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 645
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 225/519 (43%), Gaps = 75/519 (14%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VL 131
++N Y+K ++ A+ +F + +V ++N ++SG++ + L+ F M + G
Sbjct: 97 MLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSW 155
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME----- 186
P+ +T C +K C + ++ +V K D + +ALV+ +++C ++
Sbjct: 156 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 215
Query: 187 --------------------------EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
AL++F+ +P RDVV WN MV+ +Q G +AL
Sbjct: 216 FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 275
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
++ M +G+ + T T L+A + + G+ +H V++ V +AL+++Y
Sbjct: 276 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELY 335
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K C EA +F + +++ +W +++ Q G ++ LF++M + D +
Sbjct: 336 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 395
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T++ C L GRQ+H + +G I V ++N+L+ MY KC +++ A+
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSG--------QIQAVVVSNSLISMYAKCDNLQSAEA 447
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-------------------- 440
+F M++KD+ SW MI Y G +A + F M E
Sbjct: 448 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG 507
Query: 441 ------------LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
++PD VT+V + C+ G G + + + G++ VI
Sbjct: 508 LRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIG-RTVKVGLIIDTSVANAVI 566
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G++ EA ++ N + V W ++ HG
Sbjct: 567 TMYSKCGRILEARKV-FDFLNVKDIVSWNAMITGYSQHG 604
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 201/459 (43%), Gaps = 49/459 (10%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+V + ++N Y K + +A+++F +P RDV WN +++GY Q ++ +LE F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 228 KEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM------- 279
+ G W + FT+ + + +G+ + +V K V AL+DM
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 209
Query: 280 ------------------------YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
Y K V ALE+F+ M E+D+ SWN +++ Q G
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 269
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L + M S G + D T+++ L AC+ L++L G+Q+H ++ N
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-------LPH 322
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
ID ++ +AL+++Y K G ++A+ VF + ++ +W ++I G+ G E++++F+
Sbjct: 323 IDP-YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 381
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + D+ ++S C L GR+ L + G + + +I M +
Sbjct: 382 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC-LKSGQIQAVVVSNSLISMYAKCD 440
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGHCGNYVLM 553
L A E NE + V W +++ A GN +A R F + + + M
Sbjct: 441 NLQSA-EAIFRFMNEKDIVSWTSMITAYSQVGN-----VAKAREFFDGMSEKNVITWNAM 494
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
Y+ G E+ L + M + + +++ L G
Sbjct: 495 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 533
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 43/344 (12%)
Query: 14 CFNFSTSSGNQ------TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
CF S NQ T + F LAT I+ C + +L G+++HS L++G I +
Sbjct: 371 CFTESVELFNQMRAELMTLDQ-FALATLISG---CCSRMDLCLGRQLHSLCLKSGQIQAV 426
Query: 68 LSITSLINMYSKC--CQMKYALFVFNNLS----------------------------CEP 97
+ SLI+MY+KC Q A+F F N E
Sbjct: 427 VVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK 486
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV T+NAM+ + + GL + M + V PD T+ L K C D+ A +I
Sbjct: 487 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 546
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
G K+GL +D + +A++ Y KC + EA KVF+ L ++D+V WNAM+ GY+Q G
Sbjct: 547 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMG 606
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNA 275
+A+E+F + K G + VLS G + G+ ++ + G+ +
Sbjct: 607 KQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC 666
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD 318
++D+ G+ + EA ++ + M K W ++++ + GN++
Sbjct: 667 MVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 710
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 12/236 (5%)
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDID----DVFMNNALMDMYTKCGSMRDAQMVFTKM 405
A + +H Y+ L+ +D +V +N +++ Y K G + DA +F +M
Sbjct: 58 AVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRM 117
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK-PDEVTFVGVLSACSHSGFLSQG 464
+DVASWN ++ GY Q +L+ F M + P+ T + +C G+ S
Sbjct: 118 PARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLA 177
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ L +++ ++ E ++DM R G ++ A L + + E ++LA
Sbjct: 178 LQLLAMVQ-KFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRI-KEPTMFCRNSMLAGYV 235
Query: 525 LHGNTDLAEIAAQRVFQLEPGH-CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
D A +F P ++ +M + G+ E LD+ M+ + VR
Sbjct: 236 KTYGVD----HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 287
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 215/590 (36%), Positives = 323/590 (54%), Gaps = 20/590 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ AH GQ++HS +++ G S + ++L++MY+KC +++ A VF + N
Sbjct: 109 LKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVR-N 167
Query: 99 VFTYNAMISGFYS---NDFAFKGLDFFNHMRQLGVLPDKYTF-PCLIKCCCDVMAVLEVK 154
++NA+I GF D AF LD M++ GV + TF P L D L ++
Sbjct: 168 FVSWNALIDGFVQVGDRDTAFWLLDC---MQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQ 224
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQI 213
+H + K GL+ + +A + Y +C +E+A +VF+ + RD+V WN+M+ Y
Sbjct: 225 -LHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVH 283
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ A +F M G +T T V+SA G+ H +V+K G + V +
Sbjct: 284 DKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTIC 343
Query: 274 NALIDMYGK--GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
NALI MY K K + AL +F M+ KD SWNSI+T Q G + L+LF M S+
Sbjct: 344 NALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSL 403
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ D +S VL +CS LA L G+QIH V G N F+ ++L+ MY+K
Sbjct: 404 EEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSND--------FVASSLIFMYSK 455
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + DA F +K+ +WN ++ Y GQG ALD+FS M E ++K D VTFV V
Sbjct: 456 CGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAV 515
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH G + QGR L MES YG+ P +EHY C +D+ GRAG L EA L +MP +
Sbjct: 516 LTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQP 575
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
N +V +TLL A R GN +LA A ++ ++EP YV++SN+Y ++++ +
Sbjct: 576 NAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTR 635
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
MR++ V+K PG SWIE+K+ +H F + DRSHP ++ +Y L L ++
Sbjct: 636 LMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGELMEEMK 685
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 240/483 (49%), Gaps = 16/483 (3%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQ--MKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
H ++GII +++ YSKC + A +F+ + + V T+N MI+G+ +
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTV-TWNTMITGYVES 80
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+F M++ G D YTF ++K +++H L+ K+G + VY G
Sbjct: 81 GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SAL++ Y KC+ +E+A VF+ +P+R+ V WNA+++G+ Q+G+ A + M KEG+
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVR 200
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ T +L+ L F+K +H ++K G + + NA + Y + + +A +
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260
Query: 293 FE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F+ + +D+ +WNS++ + + LF M GF+PD+ T++ V+ AC A
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAH 320
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG--SMRDAQMVFTKMSKKD 409
+G+ H ++ GL ++ V + NAL+ MY K SM A +F M KD
Sbjct: 321 KNYGKSFHALVIKRGLEES--------VTICNALITMYLKLNNKSMEAALNLFHSMKSKD 372
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SWN ++ G+ G ++AL +F M + + D+ + VL +CS L G++ +
Sbjct: 373 RVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQ-IH 431
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
L+ + G + +I M + G + +A++ E++ + W +++ A HG
Sbjct: 432 LLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESS-ITWNSIMFAYAQHGQG 490
Query: 530 DLA 532
D+A
Sbjct: 491 DVA 493
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 184/379 (48%), Gaps = 19/379 (5%)
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC--QFMEEALKVFEELPLRDVVLWNAM 206
A+ V H FK G+ +Y+ + ++ Y KC + A K+F+E+P +D V WN M
Sbjct: 14 ALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTM 73
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ GY + G A E + M + G +T +L + G+ VH ++VK+GY
Sbjct: 74 ITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGY 133
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V +AL+DMY K + V +A ++F+ M ++ SWN+++ Q G+ D L D
Sbjct: 134 EQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDC 193
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA-KNGSCKDIDDVFMNNAL 385
M G + + TF+ +L Q+H I+ +GL N C NA
Sbjct: 194 MQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALC---------NAT 244
Query: 386 MDMYTKCGSMRDAQMVFT-KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
+ Y++CG + DA+ VF + +D+ +WN M++ Y + + ++A ++F M +PD
Sbjct: 245 LTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPD 304
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
T+ V+SAC + + G+ F L+ R G+ ++ +I M + N++ E A
Sbjct: 305 IYTYTCVISACFAAAHKNYGKSFHALVIKR-GLEESVTICNALITMYLKLN--NKSMEAA 361
Query: 505 LAM---PNEANPVVWRTLL 520
L + + V W ++L
Sbjct: 362 LNLFHSMKSKDRVSWNSIL 380
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 23/288 (7%)
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCVGEALEIFEMMEEKDIFSWNSIMTV 310
N + H K G S + V N ++ Y K + A ++F+ M KD +WN+++T
Sbjct: 17 NVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITG 76
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + GN M GFQ D TF ++L +H G+Q+H IV G ++
Sbjct: 77 YVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQS 136
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
V+ +AL+DMY KC + DA VF M ++ SWN +I G+ G A
Sbjct: 137 --------VYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAF 188
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVP-TIEHYTCV- 487
+ CM + ++ ++ TF +L+ L G +F L M+ ++ +E Y +
Sbjct: 189 WLLDCMQKEGVRVEDGTFAPLLT-------LLDGDKFYKLTMQLHCKIIKHGLEFYNALC 241
Query: 488 ---IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ G L +A + + V W ++L A +H + A
Sbjct: 242 NATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDA 289
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C+ LQ GQ+IH ++TG + +SLI MYSKC ++ A F + + E
Sbjct: 413 AVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKE 472
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-K 155
++ T+N+++ + + LD F+ MR+ V D TF ++ C V V + +
Sbjct: 473 SSI-TWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCV 531
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + G+ + + V+ + + ++EEA + + +P + NAMV
Sbjct: 532 LKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQP----NAMV 579
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 194/618 (31%), Positives = 324/618 (52%), Gaps = 45/618 (7%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
H+++L+ G ++H+ L G+ P+ + L+++Y+ + + S P YN
Sbjct: 85 HRSHLRLGVQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADSTLP--LPYN 142
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+IS + + L + M + GVLPD +T+P +++ C + ++ + +H
Sbjct: 143 VLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGA 202
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+D +++ +AL++ Y KC + A KVF+ + RDVV WN+M++ YA +G++ +A+E+F
Sbjct: 203 GMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELF 262
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMM----------------------------------- 248
RRM EG ++ T + I M
Sbjct: 263 RRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRV 322
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G+ + G+ +HG+ V+M D V NALI MY + K + A +F M+E + +WN+++
Sbjct: 323 GWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTML 382
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + +F M+ G +P+ VT T L C+ +A L HG+++HG+IV +G
Sbjct: 383 SSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFK 442
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
+ N+L+DMY+K G + AQ VF M D+ S+ MI GYGM G+G
Sbjct: 443 GYR--------LLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTV 494
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +F M ++ +KPD + V VLSACSHSG + +G E M YG+ P +EHY+C+I
Sbjct: 495 ALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMI 554
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+ RAG L +A E+ P +W L+ A GN ++ E AA+++ ++ + G
Sbjct: 555 DLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAG 614
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
+YVL++N+Y A G ++E+ +R MR V K PG +W +L +G F+ DRS+P A
Sbjct: 615 HYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNPLAPE 674
Query: 609 IYAELHSLTARLREHGDC 626
IY L L+ ++R +C
Sbjct: 675 IYVVLDELSEQMRNINNC 692
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 190/425 (44%), Gaps = 46/425 (10%)
Query: 10 PFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS 69
P + + N FT + L+ CA L G+ +H + G+ +
Sbjct: 154 PLQALAAYQEMGKNGVLPDVFTYPSV---LRACAEARELVLGRAVHMHAAGAGMDGNLFF 210
Query: 70 ITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG 129
+L++MY+KC + A VF+ + + +V ++N+MIS + + + ++ F MR G
Sbjct: 211 QNALMSMYAKCGDLASARKVFDGM-VQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEG 269
Query: 130 VLPDKYTFPCL-----------------------------------IKCCCDVMAVLEVK 154
+ T+ + + C V + K
Sbjct: 270 TEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGK 329
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IHGL ++ D + +AL+ Y +C+ ME A +F L VV WN M++ +A
Sbjct: 330 EIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSD 389
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A +FR M G+ + TV L+ + ++G+ +HG +VK G+ + N
Sbjct: 390 CAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWN 449
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LIDMY K + A +F+ M++ D+ S+ S++ + G LRLF++M+ +G +P
Sbjct: 450 SLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKP 509
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D + TVL ACSH ++ G ++ +V++ K + + ++D+Y + G
Sbjct: 510 DHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIK-------PQMEHYSCMIDLYARAGL 562
Query: 395 MRDAQ 399
+ A+
Sbjct: 563 LEKAE 567
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L+ G+EIH +R +LI MY++C M+ A +F L
Sbjct: 311 TLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRML 370
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
C P V T+N M+S F +D A + F M GV P+ T + C V +
Sbjct: 371 EC-PGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHG 429
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++HG + K G + ++L++ Y K + A VF+ + D++ + +M+ GY
Sbjct: 430 QELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQ 489
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G+ AL +F +M GI + VLSA G G + + +V+ G +
Sbjct: 490 GKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEH 549
Query: 273 MNALIDMYGKGKCVGEALEIFE 294
+ +ID+Y + + +A E+ +
Sbjct: 550 YSCMIDLYARAGLLEKAEEMLD 571
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L LCA NLQ GQE+H ++++ G L SLI+MYSK ++ A VF+ +
Sbjct: 412 TVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTM 471
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ +Y +MI+G+ L F M G+ PD ++ C VLE
Sbjct: 472 D-DCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEG 530
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAMV---- 207
+++ + +V G+ + S +++ Y + +E+A ++ + P +W A+V
Sbjct: 531 EELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACH 590
Query: 208 -NGYAQIGE 215
G +IGE
Sbjct: 591 DRGNIEIGE 599
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 350 bits (899), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 318/572 (55%), Gaps = 10/572 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+IH+ M+ TGI S LI Y++ ++ A VF+ S + V +NAMI +
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDK-SPQCGVDAWNAMIIAYSRR 83
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
F+ L ++ M GV PD T+ ++K C + + ++ G DV++G
Sbjct: 84 GAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVG 143
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+A++N Y KC M+EA++VF+++ RD+V W M+ G AQ G+ +A++++R+M K+ +
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ G++ A +G K G +HG +++ V V +L+DMY K + A +
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M K++ SW+++++ Q G L+L M S G++PD V+ +VL ACS + L
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G+ +HGYIV + D + A++DMY+KCGS+ A+ VF ++S +D S
Sbjct: 324 KLGKSVHGYIVR---------RLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSIS 374
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I YG+ G G+EAL +F M E +KPD TF +LSA SHSG + +GR + +M
Sbjct: 375 WNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMV 434
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ Y + P+ +HY C++D+L RAG++ EA EL +M E +W LL+ HG +
Sbjct: 435 NEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIG 494
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
E+AA++V +L P G Y L+SN + +++EV ++R M++ ++K PG S +E+
Sbjct: 495 EMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGK 554
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
LH F+ D+SH + + I L L ++ G
Sbjct: 555 LHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMG 586
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 209/443 (47%), Gaps = 17/443 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T L+ C +L+ G+E + G D +++N+Y+KC +M A+ VF+
Sbjct: 106 STYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDK 165
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ ++ + MI+G N A + +D + M + V D LI+ C +
Sbjct: 166 MG-RRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
IHG + + + +DV + ++LV+ Y K +E A VF + ++V+ W+A+++G+AQ
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G AL++ M G ++ VL A +GF K G+ VHG +V+ + V
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS- 343
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
A+IDMY K + A +F+ + +D SWN+I+ + G+ + L LF +M
Sbjct: 344 STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNV 403
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD TF+++L A SH + GR I+VN S K ++D+ ++
Sbjct: 404 KPDHATFASLLSAFSHSGLVEKGRYWFS-IMVNEYKIQPSEKHY------ACMVDLLSRA 456
Query: 393 GSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G + +AQ + M ++ +A W + L G GK + + +L PD+ G+
Sbjct: 457 GRVEEAQELIESMITEPGIAIW--VALLSGCLNHGKFLIGEMAAKKVLELNPDD---PGI 511
Query: 452 LSACSHSGFLSQGREFLPLMESR 474
S S+ F + R + + E R
Sbjct: 512 YSLVSN--FFATARRWDEVAEVR 532
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q+F + + ++ L C+ L+ G+ +H Y++R D +S T++I+MYSKC +
Sbjct: 299 QSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDC-VSSTAVIDMYSKCGSL 357
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+A VF+ +S ++ ++NA+I+ + + + L F MR+ V PD TF L+
Sbjct: 358 SFARTVFDQISFRDSI-SWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSA 416
Query: 144 CCDVMAVLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-D 199
V + + ++ +K+ Y + +V+ + +EEA ++ E +
Sbjct: 417 FSHSGLVEKGRYWFSIMVNEYKIQPSEKHY--ACMVDLLSRAGRVEEAQELIESMITEPG 474
Query: 200 VVLWNAMVNGYAQIGEF 216
+ +W A+++G G+F
Sbjct: 475 IAIWVALLSGCLNHGKF 491
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 315/555 (56%), Gaps = 11/555 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
LI MY KC ++ A VF+ + + NV ++ A++ G N + L F+ M GV
Sbjct: 11 NDLIVMYGKCGRLGVACDVFDRM-LKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGV 69
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P+ +TF +K C + + ++IH + K G D+ +G+++++ Y KC + EA
Sbjct: 70 KPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAAC 129
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+FE +P+R+++ WNAM+ GY G KAL +F++M + G ++ FT T L A +G
Sbjct: 130 MFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA 189
Query: 251 FKNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
K G +H ++ G Y V ALID+Y K + A +F +EEK + SW +++
Sbjct: 190 IKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALI 249
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ Q GN ++ LF ++ + Q D S+++ + A + G+Q+H + +
Sbjct: 250 LGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAI----- 304
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
K S DI + N+++DMY KCG + +A+ +F++M ++V SW +MI GYG G GKE
Sbjct: 305 KVPSGVDIS---VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKE 361
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+ +F M +PD+VT++ VL CSHSG + +G+E+ + S +G+ +EHY C++
Sbjct: 362 AIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMV 421
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+LGRAG+L EA L +MP EAN +W+TLL+A R+HG+ +L + + +L+ +
Sbjct: 422 DLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPV 481
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
NYV+MSNIY G ++E IR ++ + ++K G SW+E+ +H F D +HP +
Sbjct: 482 NYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEK 541
Query: 609 IYAELHSLTARLREH 623
I+ L + R++E
Sbjct: 542 IHEILKEMERRMKEE 556
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 209/424 (49%), Gaps = 22/424 (5%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
M I NP S FS + + FT +T +L+ C L G++IH ++
Sbjct: 45 MCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFST---NLKACGLLNGLDIGRQIHDICVK 101
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
TG + S+I+MYSKC ++ A +F + N+ ++NAMI+G+ F K L
Sbjct: 102 TGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVR-NLISWNAMIAGYTVAGFCEKALV 160
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL--DLDVYIGSALVNT 178
F M+++G D++TF +K C D+ A+ E +IH + G ++ + AL++
Sbjct: 161 LFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDL 220
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y+KC + A +VF + + V+ W A++ GYAQ G +++E+FR++ + I + F +
Sbjct: 221 YVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFIL 280
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
+ ++ + G+ +H +K+ + V N+++DMY K + EA +F M
Sbjct: 281 SSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPA 340
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ- 357
+++ SW ++T + + G +RLFD M +PD VT+ VL CSH + G++
Sbjct: 341 RNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEY 400
Query: 358 ---IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASW 413
+ Y + ++ +C ++D+ + G +++A+ + M + +V W
Sbjct: 401 FSRLCSYHGIKARVEHYAC-----------MVDLLGRAGRLKEAKNLVDSMPLEANVGIW 449
Query: 414 NIMI 417
++
Sbjct: 450 QTLL 453
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 190/368 (51%), Gaps = 14/368 (3%)
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
+G D+ + + L+ Y KC + A VF+ + R+VV W A++ G+ Q G ++L +
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M G+ + FT + L A ++ GR +H I VK G+D V N++IDMY K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ EA +FE+M +++ SWN+++ + G + L LF +M G D TF++
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L ACS L A+ G QIH +++ G + + + AL+D+Y KCG + A+ VF
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYS------VNTAVAGALIDLYVKCGKLFMARRVF 234
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ + +K V SW +ILGY +G E++++F + E+ ++ D ++ + +
Sbjct: 235 SHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQ 294
Query: 463 QGREFLPLMESRYGVVPT-IEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
QG++ M + VP+ ++ C ++DM + G +NEA L MP N + W +
Sbjct: 295 QGKQ----MHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR-NVISWTVM 349
Query: 520 LAASRLHG 527
+ HG
Sbjct: 350 ITGYGKHG 357
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/586 (33%), Positives = 317/586 (54%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y K + +AL +F+++ E +V ++N M+S + + LD M+ GV
Sbjct: 209 SMLAGYVKTYGVDHALELFDSMP-ERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVR 267
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SALV Y K +EA V
Sbjct: 268 LDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGV 327
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W +++G+ Q G F +++E+F +M E + + +F + ++S
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G V V N+LI MY K + A IF M EKDI SW S++T +
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAY 447
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLSAGF-QPDLVT 338
Q GN DG LR++ MLS + +PD VT
Sbjct: 448 SQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG-LRMYKVMLSEEYVRPDWVT 506
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ L A G QI G V GL I D + NA++ MY+KCG + +A
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGL--------IIDTSVANAVITMYSKCGRILEA 558
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF ++ KD+ SWN MI GY G GK+A+++F + + KPD +++V VLS CSHS
Sbjct: 559 RKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHS 618
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M+ + + P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 619 GLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGA 678
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+LM+ IY GK ++ IR MR + +
Sbjct: 679 LLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGI 738
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+ + +H F + D SHP+ +I +L L ++ G
Sbjct: 739 KKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLG 784
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 41/359 (11%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA ++L+ G+++H+ ++R P ++L+ +Y+K K A VFN+L
Sbjct: 272 TYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSL 331
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
NV + +ISGF + ++ FN MR + D++ LI CC M +
Sbjct: 332 HDRNNV-AWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G V + ++L++ Y KC ++ A +F + +D+V W +M+ Y+Q+
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 450
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG------------------------ 249
G KA E F MS++ + T +L A I G
Sbjct: 451 GNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506
Query: 250 ---FFKN---------GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
FK G + G VK+G V NA+I MY K + EA ++F+ +
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
KDI SWN+++T + Q G + +FD +L G +PD +++ VL CSH + G+
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 225/519 (43%), Gaps = 75/519 (14%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VL 131
++N Y+K ++ A+ +F + +V ++N ++SG++ + L+ F M + G
Sbjct: 77 MLNGYAKLGRLSDAVELFGRMPAR-DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSW 135
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME----- 186
P+ +T C +K C + ++ +V K D + +ALV+ +++C ++
Sbjct: 136 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 195
Query: 187 --------------------------EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
AL++F+ +P RDVV WN MV+ +Q G +AL
Sbjct: 196 FVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREAL 255
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
++ M +G+ + T T L+A + + G+ +H V++ V +AL+++Y
Sbjct: 256 DMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELY 315
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K C EA +F + +++ +W +++ Q G ++ LF++M + D +
Sbjct: 316 AKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALA 375
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T++ C L GRQ+H + +G I V ++N+L+ MY KC +++ A+
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSG--------QIQAVVVSNSLISMYAKCDNLQSAEA 427
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-------------------- 440
+F M++KD+ SW MI Y G +A + F M E
Sbjct: 428 IFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDG 487
Query: 441 ------------LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
++PD VT+V + C+ G G + + + G++ VI
Sbjct: 488 LRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIG-RTVKVGLIIDTSVANAVI 546
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G++ EA ++ N + V W ++ HG
Sbjct: 547 TMYSKCGRILEARKV-FDFLNVKDIVSWNAMITGYSQHG 584
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 201/459 (43%), Gaps = 49/459 (10%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+V + ++N Y K + +A+++F +P RDV WN +++GY Q ++ +LE F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 228 KEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM------- 279
+ G W + FT+ + + +G+ + +V K V AL+DM
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAV 189
Query: 280 ------------------------YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
Y K V ALE+F+ M E+D+ SWN +++ Q G
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSG 249
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
L + M S G + D T+++ L AC+ L++L G+Q+H ++ N
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN-------LPH 302
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
ID ++ +AL+++Y K G ++A+ VF + ++ +W ++I G+ G E++++F+
Sbjct: 303 IDP-YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQ 361
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + D+ ++S C L GR+ L + G + + +I M +
Sbjct: 362 MRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLC-LKSGQIQAVVVSNSLISMYAKCD 420
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGHCGNYVLM 553
L A E NE + V W +++ A GN +A R F + + + M
Sbjct: 421 NLQSA-EAIFRFMNEKDIVSWTSMITAYSQVGN-----VAKAREFFDGMSEKNVITWNAM 474
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
Y+ G E+ L + M + + +++ L G
Sbjct: 475 LGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKG 513
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 43/344 (12%)
Query: 14 CFNFSTSSGNQ------TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
CF S NQ T + F LAT I+ C + +L G+++HS L++G I +
Sbjct: 351 CFTESVELFNQMRAELMTLDQ-FALATLISG---CCSRMDLCLGRQLHSLCLKSGQIQAV 406
Query: 68 LSITSLINMYSKC--CQMKYALFVFNNLS----------------------------CEP 97
+ SLI+MY+KC Q A+F F N E
Sbjct: 407 VVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK 466
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV T+NAM+ + + GL + M + V PD T+ L K C D+ A +I
Sbjct: 467 NVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQI 526
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
G K+GL +D + +A++ Y KC + EA KVF+ L ++D+V WNAM+ GY+Q G
Sbjct: 527 IGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMG 586
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNA 275
+A+E+F + K G + VLS G + G+ ++ + G+ +
Sbjct: 587 KQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC 646
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD 318
++D+ G+ + EA ++ + M K W ++++ + GN++
Sbjct: 647 MVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNE 690
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 6/159 (3%)
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDID----DVFMNNALMDMYTKCGSMRDAQMVFTKM 405
A + +H Y+ L+ +D +V +N +++ Y K G + DA +F +M
Sbjct: 38 AVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRM 97
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK-PDEVTFVGVLSACSHSGFLSQG 464
+DVASWN ++ GY Q +L+ F M + P+ T + +C G+ S
Sbjct: 98 PARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLA 157
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ L +++ ++ E ++DM R G ++ A L
Sbjct: 158 LQLLAMVQ-KFDSQDDSEVAAALVDMFVRCGAVDLASRL 195
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 308/577 (53%), Gaps = 37/577 (6%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
+L++MY KC +++ A F+F+ + E ++ T+ MI G+ A + L F MR+ GV+
Sbjct: 198 ALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVV 256
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PDK ++ C + A+ + + I + + LDV +G+A+++ Y KC +E A ++
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+ + ++V+ W+AM+ Y G+ KAL++FR M G+ + T+ +L A I
Sbjct: 317 FDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNL 376
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW------- 304
R VH G + V N L+ Y + + +A +F+ M +D SW
Sbjct: 377 TQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGF 436
Query: 305 -------NSIMTVHEQ--------------CGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
N T E CGN + +L LFD+M G PD V TV+
Sbjct: 437 AKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVV 496
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L A+ R I YI DV + A++DM+ KCG + A+ +F
Sbjct: 497 FACAKLGAMHKARTIDDYIQRKKFQL--------DVILGTAMIDMHAKCGCVESAREIFD 548
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M +K+V SW+ MI YG GQG++ALD+F M + + P+++T V +L ACSH+G + +
Sbjct: 549 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 608
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G F LM Y V ++HYTCV+D+LGRAG+L+EA +L +M E + +W L A
Sbjct: 609 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 668
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R H + LAE AA + +L+P + G+Y+L+SNIY G++E+V R M Q+ ++K PG
Sbjct: 669 RTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 728
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+WIE+ + H F D +HP +K IY L SL +L
Sbjct: 729 WTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 765
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 239/510 (46%), Gaps = 60/510 (11%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL + +++H+ G++++ + LI YS + A +F+ + C + +++ M+
Sbjct: 93 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM-CVRDSVSWSVMV 151
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
GF F + + G PD YT P +I+ C D+
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN----------------- 194
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+ ALV+ Y+KC+ +E+A +F+++ RD+V W M+ GYA+ G+ +++L +F +M
Sbjct: 195 ----LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 250
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+EG+ + + V+ A +G R++ + + + V + A+IDMY K CV
Sbjct: 251 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 310
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A EIF+ MEEK++ SW++++ + G L LF MLS+G PD +T +++L AC
Sbjct: 311 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYAC 370
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L RQ+H V+G+ +N + + N L+ Y+ ++ DA +F M
Sbjct: 371 INCRNLTQVRQVHAQASVHGMLQN--------LIVANKLVHFYSYYRALDDAYGLFDGMC 422
Query: 407 KKDVASWNIMILGYG----------------------------MDGQGKEALDMFSCMCE 438
+D SW++M+ G+ G E+L +F M E
Sbjct: 423 VRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMRE 482
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ PD+V V V+ AC+ G + + R ++ + + I T +IDM + G +
Sbjct: 483 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG-TAMIDMHAKCGCVE 541
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGN 528
A E+ M E N + W ++AA HG
Sbjct: 542 SAREIFDRM-EEKNVISWSAMIAAYGYHGQ 570
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 174/339 (51%), Gaps = 33/339 (9%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
L L K+ L+ C + +V+++H G+ ++ + + L+ Y + +++
Sbjct: 76 LQRLNPKFYISALVNC----RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDD 131
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+ + +RD V W+ MV G+A++G++ FR + + G +T+ V+ A
Sbjct: 132 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD 191
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ KN + AL+DMY K + + +A +F+ M+E+D+ +W +
Sbjct: 192 L---KN------------------LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVM 230
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + +CG + +L LF++M G PD V TV+ AC+ L A+ R I YI
Sbjct: 231 IGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKF 290
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DV + A++DMY KCG + A+ +F +M +K+V SW+ MI YG GQG+
Sbjct: 291 QL--------DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 342
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+ALD+F M + + PD++T +L AC + L+Q R+
Sbjct: 343 KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQ 381
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 133/297 (44%), Gaps = 31/297 (10%)
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
++ R +SAL+ R VH G + V N LI Y + + +A
Sbjct: 75 FLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 134
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ M +D SW+ ++ + G++ F ++ G +PD T V+ A
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA------ 188
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
C+D+ ++ M AL+DMY KC + DA+ +F KM ++D+
Sbjct: 189 ---------------------CRDLKNLQM--ALVDMYVKCREIEDARFLFDKMQERDLV 225
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+W +MI GY G+ E+L +F M E + PD+V V V+ AC+ G + + R +
Sbjct: 226 TWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 285
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ + + I T +IDM + G + A E+ M E N + W ++AA HG
Sbjct: 286 QRKKFQLDVILG-TAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQ 340
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 143/305 (46%), Gaps = 31/305 (10%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + NL + +++H+ G++ + + L++ YS + A +F+ +
Sbjct: 362 TLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM 421
Query: 94 SCEPNVFTYNAMISGF-----YSNDF-----------------------AFKGLDFFNHM 125
C + +++ M+ GF Y N F A + L F+ M
Sbjct: 422 -CVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKM 480
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
R+ GV+PDK ++ C + A+ + + I + + LDV +G+A+++ + KC +
Sbjct: 481 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 540
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
E A ++F+ + ++V+ W+AM+ Y G+ KAL++F M + GI ++ T+ +L A
Sbjct: 541 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 600
Query: 246 IMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFS 303
G + G R + + V ++D+ G+ + EAL++ E M EKD
Sbjct: 601 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGL 660
Query: 304 WNSIM 308
W + +
Sbjct: 661 WGAFL 665
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/493 (34%), Positives = 288/493 (58%), Gaps = 9/493 (1%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD+ + L+K C + + E K +H V D+ I ++L+ Y +C +E A ++
Sbjct: 72 PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+E+P RD+V W +M+ GYAQ AL +F RM +G + FT++ ++ M +
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H K G S V V ++L+DMY + +GEA+ +F+ + K+ SWN+++ +
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+ G + L LF RM G++P T+S +L +CS + L G+ +H +++ + G
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG 311
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
++ N L+ MY K GS+RDA+ VF K+ K DV S N M++GY G GKEA
Sbjct: 312 --------YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQ 363
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M ++P+++TF+ VL+ACSH+ L +G+ + LM +Y + P + HY ++D+L
Sbjct: 364 QFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMR-KYNIEPKVSHYATIVDLL 422
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG L++A MP E +W LL AS++H NT++ AAQRVF+L+P + G +
Sbjct: 423 GRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHT 482
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
L++NIY + G++E+V +R M+ V+K P CSW+E+++ +H F+++D +HP+ + I+
Sbjct: 483 LLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHK 542
Query: 612 ELHSLTARLREHG 624
L +++E G
Sbjct: 543 MWEKLNQKIKEIG 555
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 180/322 (55%), Gaps = 1/322 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L++G+ +H ++L + + SL+ MY++C ++ A +F+ + +
Sbjct: 81 LKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP-HRD 139
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ +MI+G+ ND A L F M G P+++T L+KCC + + ++IH
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+K G +V++GS+LV+ Y +C ++ EA+ VF++L ++ V WNA++ GYA+ GE +
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F RM +EG + FT + +LS+ MG + G+ +H ++K V N L+
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLH 319
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A ++F+ + + D+ S NS++ + Q G + FD M+ G +P+ +T
Sbjct: 320 MYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDIT 379
Query: 339 FSTVLPACSHLAALMHGRQIHG 360
F +VL ACSH L G+ G
Sbjct: 380 FLSVLTACSHARLLDEGKHYFG 401
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 5/280 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ + + C + + G++IH+ + G + +SL++MY++C + A+ V
Sbjct: 176 FTLSSLV---KCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L C+ N ++NA+I+G+ + L F M++ G P ++T+ L+ C +
Sbjct: 233 FDKLGCK-NEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGC 291
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + K +H + K L Y+G+ L++ Y K + +A KVF++L DVV N+M+ G
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ G +A + F M + GI + T VL+A G+ G++ K +
Sbjct: 352 YAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPK 411
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
V ++D+ G+ + +A E M E + W +++
Sbjct: 412 VSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 315/560 (56%), Gaps = 15/560 (2%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
S +S ++++ Y K + A+ +F+ S + + ++N ++SG N +GL F M
Sbjct: 80 SVVSYNTILSGYFKFGLVSEAIKLFDGTS-KRDCHSWNIVLSGCVKNHKLGEGLTHFMKM 138
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
R V PD +T+ +I CC +++H + K+ DLD +IG+ L+ Y + +
Sbjct: 139 RCSSVRPDNFTYAIIIPCCDLGFG----QQVHADIVKVCSDLDAFIGTNLLRMYAEVGEI 194
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
+A KVF+ +P R +V WNAM++ Y++ G K++ +FR++ +EGI +T VL+
Sbjct: 195 GDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEF 254
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
VH ++++ G+ S NAL+++Y K V A +FE + ++D+ SW
Sbjct: 255 AARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWT 314
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
I+ Q G+ + + LF +M +P+ TF +L AC+ A GR HG ++
Sbjct: 315 VIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKF 374
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GL DV + +A++DMY+KCG M DA F +M ++D+ASWN +I GY +G
Sbjct: 375 GLLGA-------DVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGA 427
Query: 426 GKEALDMFSCMC---EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G +AL +++ M + + P+EVTFVGVL ACSH+G L +G + M ++ + PT E
Sbjct: 428 GMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAE 487
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HYTC++D+LGRAG L EA L LA+P + + V+W LL A +LHG+ + A+ ++
Sbjct: 488 HYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTN 547
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP + NYVL++N Y G++ E ++IR M + V K GCSW+E+ +H+F++ D
Sbjct: 548 EPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHSFLAGDXL 607
Query: 603 HPEAKSIYAELHSLTARLRE 622
HP+ + L L ++RE
Sbjct: 608 HPQIEVASQVLPRLYLQMRE 627
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 330/600 (55%), Gaps = 17/600 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P ++ L++C + +G ++H Y+L++G + ++ LI+MY KC + A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+++ E NV +++A++SG N L F+ M + G+ P+++TF +K C +
Sbjct: 63 VFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ + +IHG K+G ++ V +G++LV+ Y KC + EA KVF + R ++ WNAM+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWM--SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
G+ G KAL+ F M + I FT+T +L A G G+ +HG +V+ G+
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 267 --DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
S + +L+D+Y K + A + F+ ++EK + SW+S++ + Q G + LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV--NGLAKNGSCKDIDDVFMN 382
R+ Q D S+++ + A L G+Q+ V +GL + +
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL----------ETSVL 351
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+++DMY KCG + +A+ F +M KDV SW ++I GYG G GK+++ +F M ++
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PDEV ++ VLSACSHSG + +G E + +G+ P +EHY CV+D+LGRAG+L EA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKH 471
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L MP + N +W+TLL+ R+HG+ +L + + + +++ + NYV+MSN+Y G
Sbjct: 472 LIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY 531
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ E + R + ++K G SW+E++ +H F S + SHP I L RLRE
Sbjct: 532 WNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE 591
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 207/406 (50%), Gaps = 16/406 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS + + FT +T +L+ C L+KG +IH + L+ G SL++M
Sbjct: 95 FSEMGRQGIYPNEFTFST---NLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV--LPDK 134
YSKC ++ A VF + + ++ ++NAMI+GF + K LD F M++ + PD+
Sbjct: 152 YSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVF 192
+T L+K C + K+IHG + + G I +LV+ Y+KC ++ A K F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++ + ++ W++++ GYAQ GEF +A+ +F+R+ + + F ++ ++ +
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ + + VK+ V+N+++DMY K V EA + F M+ KD+ SW ++T +
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ G ++R+F ML +PD V + VL ACSH + G ++ + L +G
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL----LETHGI 446
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++ ++D+ + G +++A+ + M K +V W ++
Sbjct: 447 KPRVEHY---ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 318/552 (57%), Gaps = 11/552 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C +L G++IH +++ D+ + +T L++MY+KC ++K A VFN+++
Sbjct: 148 ALKACTELQDLDNGKKIHCQLVKVPSFDNVV-LTGLLDMYAKCGEIKSAHKVFNDITLR- 205
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV + +MI+G+ ND +GL FN MR+ VL ++YT+ LI C + A+ + K H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + K G++L + ++L++ Y+KC + A +VF E D+V+W AM+ GY G +
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+AL +F++M I + T+ VLS ++ + GR VHG+ +K+G +D+ V NAL
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NAL 383
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY K +A +FEM EKDI +WNSI++ Q G+ L LF RM S P+
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT +++ AC+ L +L G +H Y V G + S V + AL+D Y KCG +
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS------VHVGTALLDFYAKCGDPQ 497
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+++F + +K+ +W+ MI GYG G +L++F M + + KP+E TF +LSAC
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G +++G+++ M Y P+ +HYTC++DML RAG+L +A ++ MP + + +
Sbjct: 558 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L +H DL EI +++ L P YVL+SN+Y + G++ + ++R+ M+Q+
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 577 NVRKNPGCSWIE 588
+ K G S +E
Sbjct: 678 GLSKIAGHSTME 689
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 233/504 (46%), Gaps = 18/504 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H + C L C TN+ ++ H + G++ T L+++Y K A
Sbjct: 40 HYAASSPCFLLLSKC---TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + EP+ + + M+ + N + + + ++ + + G D F +K C ++
Sbjct: 97 LVFDQIP-EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ KKIH + K+ D + + L++ Y KC ++ A KVF ++ LR+VV W +M+
Sbjct: 156 QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY + + L +F RM + + + +T ++ A + G+ HG +VK G +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
++ +L+DMY K + A +F D+ W +++ + G+ + L LF +M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+P+ VT ++VL C + L GR +HG + G I D + NAL+
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG---------IWDTNVANALVH 385
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KC RDA+ VF S+KD+ +WN +I G+ +G EAL +F M + P+ VT
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVP--TIEHYTCVIDMLGRAGQLNEAYELAL 505
+ SAC+ G L+ G L + G + ++ T ++D + G A L
Sbjct: 446 VASLFSACASLGSLAVGSS-LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIF 503
Query: 506 AMPNEANPVVWRTLLAASRLHGNT 529
E N + W ++ G+T
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDT 527
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 333/634 (52%), Gaps = 49/634 (7%)
Query: 34 TCIASLQLCAHQT---------NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
T + L+ HQT +L++ + +H+ ++ G+ L++ L++ + ++
Sbjct: 26 TILQELKSPTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLR 85
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
YA +F+ + +PN F +N +I G+ ++ K L + M G+LP+++T P ++K C
Sbjct: 86 YAHKLFDQIP-QPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKAC 144
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+H FKLG+ + +A++N Y+ C + A +VF+++ R +V WN
Sbjct: 145 AAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWN 204
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+M+NGY+++G +A+ +FR M + G+ FT+ G+LS G F GR VH +V
Sbjct: 205 SMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT 264
Query: 265 GYDSGVPVMNALIDMYGKG---KCVGE----------------------------ALEIF 293
G + V NAL+DMY K KC ALE F
Sbjct: 265 GIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFF 324
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
M K++ SWNSI+ H Q G + + LF RM +G + T +L +CSH+ L
Sbjct: 325 NQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLA 384
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+Q H YI N + + + + NA++DMY KCG+++ A VF M +K+ SW
Sbjct: 385 LGKQAHSYIFDNNITLSAT--------LCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSW 436
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N++I + G GKEA++MF M + + PDE+TF G+LSACSHSG + G+ + +M
Sbjct: 437 NVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNL 496
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P +EHY C++D+LGR G L EA L MP + + VVW LL A R +GN + +
Sbjct: 497 TFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGK 556
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+++ +L + G YVL+SN+Y +++++ +I + Q ++K S+IE+
Sbjct: 557 QIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCC 616
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+ F+ D+ H + SIY+ L L L+ G C
Sbjct: 617 YQFMVDDKRHGASTSIYSMLGQLMDHLKSAGYPC 650
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 52/586 (8%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S ++ Y + C++ A +F+ L E +V ++N+++SG+ N + + + F++M
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFD-LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM-- 168
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG--LVFKLGLDLDVYIGSALVNTYLKCQFM 185
P+K + I + A + +I L+F+ D D+ + L+ +++ + +
Sbjct: 169 ----PEKNS----ISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
+A +F+++P+RD + WN M++GYAQ G +A RR+ E FT T ++S
Sbjct: 221 GDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA----RRLFDESPTRDVFTWTAMVSGY 276
Query: 246 IMMGFFKNGR----------------VVHGIVVKMGYD-----------SGVPVMNALID 278
+ G + ++ G V D + N +I
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMIT 336
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
YG+ + +A + F+MM ++D SW +I+ + Q G+++ L +F + G + T
Sbjct: 337 GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F L C+ +AAL G+QIHG V G F+ NAL+ MY KCGS+ +A
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTG--------CFVGNALLAMYFKCGSIDEA 448
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F + +KDV SWN M+ GY G G++AL +F M A +KPDE+T VGVLSACSH+
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G E+ M YGV+PT +HYTC+ID+LGRAG+L EA +L MP + W
Sbjct: 509 GLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGA 568
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL ASR+HGNT+L E AA+ VF++EP + G YVL+SN+Y A G++ + +R MR V
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGV 628
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PG SW+E+++ +HTF D SHPE + IYA L L ++RE G
Sbjct: 629 QKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEG 674
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 207/465 (44%), Gaps = 81/465 (17%)
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
AL VFN + +V +YNAMISG+ N + F+ M P++
Sbjct: 68 ALHVFNTMPRRSSV-SYNAMISGYLRNSKFNLARNLFDQM------PER----------- 109
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
D++ + ++ Y++ + +A ++F+ +P +DVV WN+
Sbjct: 110 ----------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG-IVVKM 264
+++GYAQ G +A EVF M ++ + + G+L+A + NGR+ ++ +
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAA-----YVHNGRIEEACLLFES 198
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
D + N L+ + + K +G+A +F+ M +D SWN++++ + Q G RLF
Sbjct: 199 KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF 258
Query: 325 DR-----------MLSAGFQPDLV----TFSTVLPACSHLAALMHGRQIHGYI------V 363
D M+S Q ++ TF +P + ++ + I GY+ +
Sbjct: 259 DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS---YNAMIAGYVQTKKMDI 315
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L ++ C++I N ++ Y + G + A+ F M ++D SW +I GY
Sbjct: 316 ARELFESMPCRNISSW---NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQS 372
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIE 482
G +EAL+MF + + + TF LS C+ L G++ ++ YG +
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ ++ M + G ++EA + + E + V W T+LA HG
Sbjct: 433 N--ALLAMYFKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHG 474
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 179/412 (43%), Gaps = 72/412 (17%)
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + ++T+++ + AL VF +P R V +NAM++GY + +F+ A +F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + ++ +T G+ +N R
Sbjct: 106 MPERDLFSWNVMLT---------GYVRNCR------------------------------ 126
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+G+A +F++M EKD+ SWNS+++ + Q G D +FD M + + ++++ +L A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAA 182
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
H +GR ++ K D+ N LM + + + DA+ +F KM
Sbjct: 183 YVH-----NGRIEEACLLF-------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+D SWN MI GY G +A +F + D T+ ++S +G L + +
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
F M + V Y +I + +++ A EL +MP N W T++
Sbjct: 287 TFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMIT---- 336
Query: 526 HGNTDLAEIA-AQRVFQLEPGH-CGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
G + +IA A++ F + P C ++ + Y G YEE L++ ++Q
Sbjct: 337 -GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQ 387
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT +L CA L+ G++IH ++ G +L+ MY KC + A F
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG 454
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E +V ++N M++G+ + F + L F M+ GV PD+ T ++ C +L+
Sbjct: 455 IE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT-GLLD 512
Query: 153 --VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAM--- 206
+ + + G+ + +++ + +EEA + +P + W A+
Sbjct: 513 RGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
Query: 207 --VNGYAQIGEFHKALEVFRRMSKE 229
++G ++GE KA E+ +M +
Sbjct: 573 SRIHGNTELGE--KAAEMVFKMEPQ 595
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 319/574 (55%), Gaps = 13/574 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P +A+ ++ + C + + G IH+ ++ G+ +L++MY K ++ ++
Sbjct: 217 PLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQ 276
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + E N ++N+ I F + F L F M + V+P T L+ ++
Sbjct: 277 VFDGM-LEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELG 335
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++HG K +DLD+++ ++LV+ Y K +E+A +FE++ R+VV WNAM+
Sbjct: 336 SFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIA 395
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q G +A + M K G + T+ VL A M K G+ +H ++ G
Sbjct: 396 NLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMF 455
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ + NALIDMY K + A IFE E+ D+ S+N+++ + Q +L LF +M
Sbjct: 456 DLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMR 514
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S G D V+F L AC++L+ HG++IH +V L+ + F++N+L+D+
Sbjct: 515 SVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHP--------FLSNSLLDL 566
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
YTK G + A +F K++KKDVASWN MILGYGM GQ A ++F M L D V++
Sbjct: 567 YTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSY 626
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL+ACSH G + +G+++ M ++ + P HY C++D+LGRAGQL++ E+ MP
Sbjct: 627 IAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 685
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
AN VW LL A R+HGN +LA+ AA+ +F+L+P H G Y LM N+Y G++ E
Sbjct: 686 FPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANK 745
Query: 569 IRHTMRQQNVRKNPGCSWIELKDG--LHTFISSD 600
IR M+ + V+KNP SW++ +DG L F+ D
Sbjct: 746 IRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 779
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 265/517 (51%), Gaps = 32/517 (6%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
KG E+H+ LR G + + +L+ Y+ C + A VF+ + E +V ++N+++S F
Sbjct: 137 KGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMP-ERDVVSWNSLVSAF 195
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-------IHGLVFK 162
N F+ R+ V + FP + V+ ++ IH L K
Sbjct: 196 LVNGM-------FHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVK 248
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
+GL+ V + +ALV+ Y K +E +++VF+ + ++ V WN+ + + G + L +
Sbjct: 249 VGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRM 308
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
FR+MS+ + T++ +L AL+ +G F GR VHG +K D + V N+L+DMY K
Sbjct: 309 FRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAK 368
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ +A IFE M+++++ SWN+++ Q G RL M +G P+ +T V
Sbjct: 369 FGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNV 428
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LPAC+ +A+L G+QIH + + GL + D+F++NAL+DMY+KCG + A+ +F
Sbjct: 429 LPACARMASLKMGKQIHAWSIRRGL--------MFDLFISNALIDMYSKCGQLSLARNIF 480
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ K DV S+N +ILGY E+L +F M + D V+F+G LSAC++
Sbjct: 481 ERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFK 539
Query: 463 QGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G+E ++ R P + + ++D+ + G L A ++ + + W T++
Sbjct: 540 HGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKI-FNKITKKDVASWNTMIL 596
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+HG D+A +F+L G +Y +S I V
Sbjct: 597 GYGMHGQIDIAF----ELFELMKGDGLDYDHVSYIAV 629
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 226/453 (49%), Gaps = 13/453 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCE-PNVFTYNAMISGF 109
+ H+ L +G + + L + +L+ Y+ + A V + + F +N++
Sbjct: 33 RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRAL 92
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK--KIHGLVFKLGLDL 167
S + L +N M + V PD TFP + +A E K ++H + G
Sbjct: 93 SSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLA 152
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV+ G+ LV Y C +A +VF+E+P RDVV WN++V+ + G FH A M
Sbjct: 153 DVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMM 212
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G ++ ++ V+ A K G +H + VK+G ++ V + NAL+DMYGK V
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
++++F+ M E++ SWNS + G + LR+F +M P +T S++LPA
Sbjct: 273 ASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALV 332
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L + GR++HGY + + D+ D+F+ N+L+DMY K GS+ A +F +M
Sbjct: 333 ELGSFDLGREVHGYSIKRAM-------DL-DIFVANSLVDMYAKFGSLEKASTIFEQMKD 384
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++V SWN MI +G EA + + M ++ P+ +T V VL AC+ L G++
Sbjct: 385 RNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQ- 443
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ R G++ + +IDM + GQL+ A
Sbjct: 444 IHAWSIRRGLMFDLFISNALIDMYSKCGQLSLA 476
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 20/258 (7%)
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEM--MEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ +P+ AL+ Y + A + + + F WNS+ LR+++
Sbjct: 47 TSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYN 106
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMH--GRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
ML + +PD TF L A + A G ++H + G + DVF N
Sbjct: 107 LMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRG--------HLADVFTGN 158
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L+ Y CG DA+ VF +M ++DV SWN ++ + ++G +A M +
Sbjct: 159 TLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPL 218
Query: 444 DEVTFVGVLSACSHSGFLSQGREF---LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ + V V+ AC Q +F + + + G+ + ++DM G+ G + +
Sbjct: 219 NVASLVSVVPACG----TEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEAS 274
Query: 501 YELALAMPNEANPVVWRT 518
++ M E N V W +
Sbjct: 275 MQVFDGML-EQNEVSWNS 291
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 331/644 (51%), Gaps = 73/644 (11%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSP-LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT-- 101
+T ++ +H +L+T + P + L+ Y+K ++ A VF+ + +PN+FT
Sbjct: 25 RTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMP-DPNLFTRN 83
Query: 102 -----------------------------YNAMISGFYSNDFAFKGLDFFNHM-RQLGVL 131
YNA+I+GF S + + + + R+ V
Sbjct: 84 ALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVR 143
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY------------ 179
P + T +I + +H V +LG ++GS LV+ Y
Sbjct: 144 PTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRV 203
Query: 180 -------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
L+C+ +E+A +F+ + RD + W MV G Q G +AL
Sbjct: 204 FQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEAL 263
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+VFRRM EG+ + ++T +L+A + + G+ +H + + Y+ V V +AL+DMY
Sbjct: 264 DVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMY 323
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + + A +F M ++I SW +++ + Q + +R F M G +PD T
Sbjct: 324 SKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLG 383
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+V+ +C++LA+L G Q H +V+GL + + ++NAL+ +Y KCGS+ DA
Sbjct: 384 SVISSCANLASLEEGAQFHCLALVSGLMRY--------ITVSNALVTLYGKCGSIEDAHR 435
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F +MS D SW ++ GY G+ KE +D+F M LKPD VTF+GVLSACS +G
Sbjct: 436 LFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGL 495
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +G ++ M+ + +VP +HYTC+ID+ R+G+ EA E MP+ + W TLL
Sbjct: 496 VEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLL 555
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
++ RL GN ++ + AA+ + + +P + +YVL+ +++ A G++ EV +R MR + V+K
Sbjct: 556 SSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKK 615
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PGCSWI+ K+ +H F + D+SHP + IY +L L +++ E G
Sbjct: 616 EPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLEWLNSKMAEEG 659
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 148/282 (52%), Gaps = 7/282 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C ++G++IH+Y+ RT D+ ++L++MYSKC ++ A VF ++C N
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCR-N 343
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMI G+ N + + + F+ M+ G+ PD +T +I C ++ ++ E + H
Sbjct: 344 IISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHC 403
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L GL + + +ALV Y KC +E+A ++F+E+ D V W A+V GYAQ G+ +
Sbjct: 404 LALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKE 463
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV---MNA 275
+++F +M G+ T GVLSA G + G + ++ +D VP+
Sbjct: 464 TIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKG-CDYFDSMQKDHDI-VPIDDHYTC 521
Query: 276 LIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGN 316
+ID+Y + EA E I +M D F W ++++ GN
Sbjct: 522 MIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGN 563
>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Glycine max]
Length = 644
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 329/605 (54%), Gaps = 17/605 (2%)
Query: 26 FNHPFTLAT-CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F P T+ C +L++ A + L +G+++H+++++ G ++ +Y KC +
Sbjct: 43 FRDPHTVHLFCANALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEAD 102
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFY-------SNDFAFKGLDFFNHMRQLGVLPDKYTF 137
A +F LS NV ++N +I G ++ + +F M V+PD TF
Sbjct: 103 DAEKLFEELSVR-NVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTF 161
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
L C + ++H KLGLDLD ++GS LV+ Y +C +E A +VF +
Sbjct: 162 NGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQH 221
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
RD+V+WN M++ YA +A +F M +G FT + +LS + ++ G+ V
Sbjct: 222 RDLVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQV 281
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
HG ++++ +DS V V +ALI+MY K + + +A +F+ M +++ +WN+I+ +
Sbjct: 282 HGHILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREG 341
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ ++L ML GF PD +T S+ + C +++A+ Q H + V + + S
Sbjct: 342 NEVMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLS----- 396
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ N+L+ Y+KCGS+ A F + D+ SW +I Y G KEA ++F M
Sbjct: 397 ---VANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKML 453
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ PD+++F+GVLSACSH G +++G + LM S Y +VP HYTC++D+LGR G +
Sbjct: 454 SCGIIPDQISFLGVLSACSHCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLI 513
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
NEA+E +MP EA +A+ LH N LA+ AA+++F +EP NY +MSNIY
Sbjct: 514 NEAFEFLRSMPMEAESNTLGAFVASCNLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIY 573
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ + +V +R M + + PGCSWIE+ + +H+F+S+D+ HP+A ++A L L
Sbjct: 574 ASHRHWSDVERVRRMMGNKCDARVPGCSWIEITNQVHSFVSNDKIHPKALEMHATLKMLL 633
Query: 618 ARLRE 622
++E
Sbjct: 634 WPMKE 638
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 319/574 (55%), Gaps = 13/574 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P +A+ ++ + C + + G IH+ ++ G+ +L++MY K ++ ++
Sbjct: 38 PLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQ 97
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + E N ++N+ I F + F L F M + V+P T L+ ++
Sbjct: 98 VFDGM-LEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELG 156
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++HG K +DLD+++ ++LV+ Y K +E+A +FE++ R+VV WNAM+
Sbjct: 157 SFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIA 216
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q G +A + M K G + T+ VL A M K G+ +H ++ G
Sbjct: 217 NLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMF 276
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ + NALIDMY K + A IFE E+ D+ S+N+++ + Q +L LF +M
Sbjct: 277 DLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMR 335
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S G D V+F L AC++L+ HG++IH +V L+ + F++N+L+D+
Sbjct: 336 SVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHP--------FLSNSLLDL 387
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
YTK G + A +F K++KKDVASWN MILGYGM GQ A ++F M L D V++
Sbjct: 388 YTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSY 447
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL+ACSH G + +G+++ M ++ + P HY C++D+LGRAGQL++ E+ MP
Sbjct: 448 IAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 506
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
AN VW LL A R+HGN +LA+ AA+ +F+L+P H G Y LM N+Y G++ E
Sbjct: 507 FPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANK 566
Query: 569 IRHTMRQQNVRKNPGCSWIELKDG--LHTFISSD 600
IR M+ + V+KNP SW++ +DG L F+ D
Sbjct: 567 IRKLMKSRKVQKNPAYSWVQDQDGNKLQAFLVGD 600
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 243/471 (51%), Gaps = 31/471 (6%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E +V ++N+++S F N F+ R+ V + FP + V+ ++
Sbjct: 3 ERDVVSWNSLVSAFLVNGM-------FHDARRALVSMMRSGFPLNVASLVSVVPACGTEQ 55
Query: 156 -------IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
IH L K+GL+ V + +ALV+ Y K +E +++VF+ + ++ V WN+ +
Sbjct: 56 EEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIG 115
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ G + L +FR+MS+ + T++ +L AL+ +G F GR VHG +K D
Sbjct: 116 CFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDL 175
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+L+DMY K + +A IFE M+++++ SWN+++ Q G RL M
Sbjct: 176 DIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQ 235
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+G P+ +T VLPAC+ +A+L G+QIH + + GL + D+F++NAL+DM
Sbjct: 236 KSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGL--------MFDLFISNALIDM 287
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCG + A+ +F + S+KD S+N +ILGY E+L +F M + D V+F
Sbjct: 288 YSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSF 346
Query: 449 VGVLSACSHSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+G LSAC++ G+E ++ R P + + ++D+ + G L A ++
Sbjct: 347 MGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKI-FNK 403
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+ + W T++ +HG D+A +F+L G +Y +S I V
Sbjct: 404 ITKKDVASWNTMILGYGMHGQIDIAF----ELFELMKGDGLDYDHVSYIAV 450
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 171/326 (52%), Gaps = 11/326 (3%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P RDVV WN++V+ + G FH A M + G ++ ++ V+ A K G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+H + VK+G ++ V + NAL+DMYGK V ++++F+ M E++ SWNS +
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + LR+F +M P +T S++LPA L + GR++HGY + +
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAM------- 173
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
D+ D+F+ N+L+DMY K GS+ A +F +M ++V SWN MI +G EA + +
Sbjct: 174 DL-DIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVT 232
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M ++ P+ +T V VL AC+ L G++ + R G++ + +IDM +
Sbjct: 233 DMQKSGECPNSITLVNVLPACARMASLKMGKQ-IHAWSIRRGLMFDLFISNALIDMYSKC 291
Query: 495 GQLNEAYELALAMPNEANPVVWRTLL 520
GQL+ A + +E + V + TL+
Sbjct: 292 GQLSLARN--IFERSEKDDVSYNTLI 315
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 16/266 (6%)
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M E+D+ SWNS+++ G R M+ +GF ++ + +V+PAC G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
IH V GL V + NAL+DMY K G + + VF M +++ SWN
Sbjct: 61 LSIHALAVKVGLNTM--------VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNS 112
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
I + G + L MF M E + P +T +L A G GRE R
Sbjct: 113 AIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKR- 171
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ I ++DM + G L +A + M + N V W ++A +G AE
Sbjct: 172 AMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR-NVVSWNAMIANLVQNG----AETE 226
Query: 536 AQRVFQ--LEPGHCGNYVLMSNIYVA 559
A R+ + G C N + + N+ A
Sbjct: 227 AFRLVTDMQKSGECPNSITLVNVLPA 252
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 338/598 (56%), Gaps = 18/598 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + + LCA Q ++ G H L+ G+ +SL++MYSKC + A +F+
Sbjct: 299 VATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD 358
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDV 147
+ E NV ++N+MI G YS D F+G F +R++ V ++ T ++ C +
Sbjct: 359 --TNEKNVISWNSMIGG-YSKDRDFRGA--FELLRKMQMEDKVKVNEVTLLNVLPVCEEE 413
Query: 148 MAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ L++K+IHG + G + D + +A V Y KC + A VF + + V WNA+
Sbjct: 414 IQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNAL 473
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ G+ Q G KAL+++ M G+ FT+ +LSA + G+ +HG +++ G+
Sbjct: 474 IGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGF 533
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ + +L+ +Y + + A F+ MEEK++ WN+++ Q L +F +
Sbjct: 534 ELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQ 593
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
MLS+ PD ++ L ACS ++AL G+++H + V + L ++ F+ +L+
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHS--------FVTCSLI 645
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG M +Q +F ++ K +WN++I GYG+ G G++A+++F M A +PD V
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSV 705
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+ +L+AC+H+G +++G E+L M+S +G+ P +EHY CV+DMLGRAG+LNEA EL
Sbjct: 706 TFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNE 765
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
+P++ + +W +LL++ R + + D+ E A ++ +L P NYVL+SN Y GK++EV
Sbjct: 766 LPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEV 825
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M++ ++K+ GCSWIE+ + F+ D S ++ I L ++ + G
Sbjct: 826 RKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIG 883
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 256/489 (52%), Gaps = 20/489 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS-ITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQLC N++ G++IH+++ + + + IT L+ MYS C + VFN S
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFN-ASRRK 158
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA++SG+ N + F M L +PD +T PC+IK C V V + +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG K + DV++G+AL+ Y K F+E A+KVF+++P R++V WN+++ + G F
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 217 HKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
++ +F+ + EG+ T+ V+ G + G V HG+ +K+G + V +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQ 333
+L+DMY K + EA +F+ EK++ SWNS++ + + + G L +M + +
Sbjct: 339 SLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ VT VLP C + ++IHGY + +G ++ D + NA + Y KCG
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQS-------DELVANAFVAGYAKCG 450
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ A+ VF M K V+SWN +I G+ +G ++ALD++ M + L+PD T +LS
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV--IDMLGRAGQLNEAYELALAMPNEA 511
AC+ LS G+E M R G ++ + C+ + + + G++ A +L E
Sbjct: 511 ACARLKSLSCGKEIHGSM-LRNGF--ELDEFICISLVSLYVQCGKILLA-KLFFDNMEEK 566
Query: 512 NPVVWRTLL 520
N V W T++
Sbjct: 567 NLVCWNTMI 575
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 338/588 (57%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + ++ + I ++ML++G + +S + L++ KC + YA VF+ +S E +
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMS-ERH 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ T+N++I+ + + + ++ + M VLPD+YT + K D+ E ++ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 159 LVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L LGL++ +V++GSALV+ Y+K EA V + + +DVVL A++ GY+Q GE
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A++ F+ M E + + +T VL + + NG+++HG++VK G++S + +L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + V ++L +F+ +E + SW S+++ Q G + L F +M+ +P+
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSF 369
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+ L CS+LA GRQIHG + G + D + + L+D+Y KCG
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR--------DKYAGSGLIDLYGKCGCSDM 421
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF +S+ DV S N MI Y +G G+EALD+F M L+P++VT + VL AC++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
S + +G E + ++ T +HY C++D+LGRAG+L EA L + N + V+WR
Sbjct: 482 SRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVIN-PDLVLWR 539
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H ++AE +++ ++EPG G +LMSN+Y + GK+ V++++ M+
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 578 VRKNPGCSWIELKDGLHTFISSDR-SHPEAKSIYAELHSLTARLREHG 624
++KNP SW+E+ HTF++ D SHP ++ I L L + ++ G
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLG 647
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 303/556 (54%), Gaps = 41/556 (7%)
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N +I+ + + L+ + +R++ D + P ++K C V K+IHG V
Sbjct: 92 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K GLD DV++G+AL+ Y +C +E A VF+++ RDVV W+ M+ ++ EF ALE
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALE 211
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS--GVPVMNALIDM 279
+ R M+ + S + +++ + G+ +H V++ + GVP AL+DM
Sbjct: 212 LIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDM 271
Query: 280 YGKGKCVG-------------------------------EALEIFEMMEEKDIFSWNSIM 308
Y K +G EA +F+ + +D+ W +++
Sbjct: 272 YAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAML 331
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ + Q D LFD+M ++G +P VT ++L C+ AL G+ +H YI +
Sbjct: 332 SAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVE 391
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
D +N AL+DMY KCG + A +F + +D+ WN +I G+ M G G+E
Sbjct: 392 V--------DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEE 443
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
ALD+F+ M +KP+++TF+G+L ACSH+G +++G++ M +G+VP IEHY C++
Sbjct: 444 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 503
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+LGRAG L+EA+E+ +MP + N +VW L+AA RLH N L E+AA ++ ++EP +CG
Sbjct: 504 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCG 563
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
VLMSNIY A ++ + +R TM+ ++K PG S IE+ +H F+ D+SHP+ +
Sbjct: 564 YNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRR 623
Query: 609 IYAELHSLTARLREHG 624
I L + +L E G
Sbjct: 624 INEMLAEMRRKLNEAG 639
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 156/353 (44%), Gaps = 34/353 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + Q G+EIH ++L+ G+ +L+ MY +C ++YA VF+ + E +
Sbjct: 131 LKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM-MERD 189
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +++ MI N L+ M + V P + ++ D + K +H
Sbjct: 190 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 249
Query: 159 LVFKLGLD--LDVYIGSALVNTYLKC-------------------------------QFM 185
V + + + V +AL++ Y KC +
Sbjct: 250 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 309
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
EEA +F+ RDV++W AM++ YAQ +A +F +M G+ ++ T+ +LS
Sbjct: 310 EEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC 369
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ G G+ VH + K + + AL+DMY K + A +F +DI WN
Sbjct: 370 AVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 429
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+I+T G + L +F M G +P+ +TF +L ACSH + G+++
Sbjct: 430 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKL 482
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 16/226 (7%)
Query: 1 MLSKISRINPFSSCFNF---STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSY 57
MLS ++ N FN +SG + T T ++ L LCA L G+ +HSY
Sbjct: 330 MLSAYAQANCIDQAFNLFDQMRTSGVRP-----TKVTIVSLLSLCAVAGALDLGKWVHSY 384
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
+ + + + T+L++MY+KC + A +F + ++ +NA+I+GF + + +
Sbjct: 385 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEE 443
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALV 176
LD F M + GV P+ TF L+ C V E KK+ +V GL + +V
Sbjct: 444 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMV 503
Query: 177 NTYLKCQFMEEALKVFEELPLR-DVVLWNAMV-----NGYAQIGEF 216
+ + ++EA ++ + +P++ + ++W A+V + Q+GE
Sbjct: 504 DLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGEL 549
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 293/505 (58%), Gaps = 10/505 (1%)
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L + M + G P+ +TFP +K C + + + HG + K+G + ++ + L
Sbjct: 31 LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 90
Query: 176 VNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
++ Y K ++ A KVFEE + V +NA+V+GY + +A+ +FR+M++EG+ +
Sbjct: 91 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ T+ G++ A + + G +H +K G+DS V V+N I MY K V A ++F
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M K + SWN++++ + Q G L L+ M G PD VT VL +C++L A
Sbjct: 211 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 270
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G ++ I +G N F+NNAL++MY +CG++ AQ VF M ++ + SW
Sbjct: 271 VGHEVEFKIQASGFTSNP--------FLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 322
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+I GYGM G G+ A+ +F M + ++PD FV VLSACSH+G QG E+ +M+
Sbjct: 323 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKR 382
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
Y + P EHY+C++D+LGRAG+L EA L +MP + + VW LL A ++H N +LAE
Sbjct: 383 NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAE 442
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A +RV +LEP + G YVL+SNIY + VL IR M+++ ++K+PGCS++ELK +
Sbjct: 443 LAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRV 502
Query: 594 HTFISSDRSHPEAKSIYAELHSLTA 618
H FI DR+H ++ IY L L A
Sbjct: 503 HPFIVGDRNHLQSDEIYRVLEELEA 527
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 188/400 (47%), Gaps = 26/400 (6%)
Query: 25 TFNHPFTLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
F PF L +C A SL + G + H + + G + P T LI+MY K +
Sbjct: 49 AFTFPFALKSCAALSLPIL--------GSQFHGQITKVGCVFEPFVQTGLISMYCKGSLV 100
Query: 84 KYALFVFN-NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
A VF N YNA++SG+ SN + + F M + GV + T LI
Sbjct: 101 DNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIP 160
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + + +H K G D DV + + + Y+KC + A K+F+E+P++ ++
Sbjct: 161 ACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLIS 220
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNAMV+GYAQ G LE++R M G+ T+ GVLS+ +G G V +
Sbjct: 221 WNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQ 280
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G+ S + NALI+MY + + +A +F+ M E+ + SW +I+ + G+ + ++
Sbjct: 281 ASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQ 340
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG----SCKDIDD 378
LF M+ +G +PD F VL ACSH G + + N + G SC
Sbjct: 341 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSC----- 395
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G +++AQ + M K D A W ++
Sbjct: 396 ------MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 429
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 14/333 (4%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN + A+ +F +AL ++ +M + G + FT L + + G HG +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGT 320
K+G V LI MY KG V A ++FE K +N++++ +
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
+ LF +M G + VT ++PAC L G +H + G DV
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFD--------SDVS 188
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ N + MY KCGS+ AQ +F +M K + SWN M+ GY +G L+++ M
Sbjct: 189 VVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNG 248
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ PD VT VGVLS+C++ G S G E + S + P + + +I+M R G L +
Sbjct: 249 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTK 306
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A + MP E V W ++ +HG+ ++A
Sbjct: 307 AQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIA 338
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 319/588 (54%), Gaps = 13/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA L G ++HS +++ + +L++MY+K ++ A F + N
Sbjct: 435 LSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDN 494
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N +I G+ + + F M LG+LPD+ + ++ C V + + K++H
Sbjct: 495 V-SWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHC 553
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G + +Y GS+L++ Y KC ++ A K+ +P R VV NA++ GYAQI +
Sbjct: 554 LSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQIN-LEQ 612
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN-ALI 277
A+ +FR M EGI + T +L A GR +H +++KMG + +L+
Sbjct: 613 AVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLL 672
Query: 278 DMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY +A +F E K W ++++ Q L+L+ M S PD
Sbjct: 673 GMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQ 732
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
TF + L AC+ ++++ G + H I G D ++AL+DMY KCG ++
Sbjct: 733 ATFVSALRACAVVSSIKDGTETHSLIFHTGFDS--------DELTSSALVDMYAKCGDVK 784
Query: 397 DAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ VF +MS KKDV SWN MI+G+ +G ++AL +F M ++ + PD+VTF+GVL+AC
Sbjct: 785 SSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTAC 844
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SHSG +S+GR +M + YG+ P +H C++D+LGR G L EA E + E + V
Sbjct: 845 SHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKV 904
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W T+L A R+HG+ + AA+++ +LEP + YVL+SNIY A G ++EV +R MR+
Sbjct: 905 WATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMRE 964
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ V+K PGCSWI + + F++ D+SH A I A L LT +RE+
Sbjct: 965 KGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMREN 1012
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 250/524 (47%), Gaps = 76/524 (14%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
IH+ L+ G + ++++Y+KC + YA F L + ++ +N+++S
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLE-DKDILAWNSILSMHSKQG 139
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
F + +F + GV P+++TF ++ C + V +++H V K+G + Y
Sbjct: 140 FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEG 199
Query: 174 ALVNTYLKCQFM-------------------------------EEALKVFEEL------- 195
AL+ Y KC F+ EEA+KVF+E+
Sbjct: 200 ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEP 259
Query: 196 ----------------------------PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
P R+VV WN M++G+A+ G +A+E F+ M
Sbjct: 260 DQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMR 319
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
K GI +R T+ VLSA+ + G +VH +K G S V V ++L+ MY K +
Sbjct: 320 KAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKME 379
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ + E+++ WN+++ + Q G + + LF M S GF PD T+S++L AC+
Sbjct: 380 AAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACA 439
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L L G Q+H I+ N A N +F+ NAL+DMY K G++ DA+ F +
Sbjct: 440 CLKYLDLGHQLHSVIIKNKFASN--------LFVGNALVDMYAKSGALEDARQQFELIRN 491
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+D SWN++I+GY + EA +F M + PDEV+ +LSAC+ L QG++
Sbjct: 492 RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQ- 550
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+ + + G + + +IDM + G ++ A+++ MP +
Sbjct: 551 VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERS 594
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 218/423 (51%), Gaps = 10/423 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
++ ++ M + G ++ ++IN Y ++ A +F+ + NV +N MISG
Sbjct: 243 EEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMP-NRNVVAWNLMISG 301
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
+ + ++FF +MR+ G+ + T ++ + A+ +H K GL +
Sbjct: 302 HAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSN 361
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
VY+GS+LV+ Y KC ME A KVF+ L ++VVLWNAM+ GY Q G ++ +E+F M
Sbjct: 362 VYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKS 421
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G + FT + +LSA + + G +H +++K + S + V NAL+DMY K + +
Sbjct: 422 CGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALED 481
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A + FE++ +D SWN I+ + Q + LF RM G PD V+ +++L AC+
Sbjct: 482 ARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACAS 541
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
+ L G+Q+H V G ++ ++L+DMY KCG++ A + M ++
Sbjct: 542 VRGLEQGKQVHCLSVKTGQETK--------LYSGSSLIDMYAKCGAIDSAHKILACMPER 593
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
V S N +I GY ++A+++F M + E+TF +L AC L+ GR+
Sbjct: 594 SVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIH 652
Query: 469 PLM 471
L+
Sbjct: 653 SLI 655
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 254/511 (49%), Gaps = 15/511 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A L G +H+ L+ G+ + +SL++MY+KC +M+ A VF
Sbjct: 326 TRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVF 385
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L+ E NV +NAM+ G+ N +A + ++ F +M+ G PD +T+ ++ C + +
Sbjct: 386 DTLN-EQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYL 444
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++H ++ K ++++G+ALV+ Y K +E+A + FE + RD V WN ++ GY
Sbjct: 445 DLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGY 504
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q + +A +FRRM+ GI ++ +LSA + + G+ VH + VK G ++ +
Sbjct: 505 VQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKL 564
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
++LIDMY K + A +I M E+ + S N+++ + Q N + + LF ML
Sbjct: 565 YSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVE 623
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +TF+++L AC L GRQIH I+ GL +DD F+ +L+ MY
Sbjct: 624 GINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGL-------QLDDEFLGVSLLGMYM 676
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
DA ++F++ S K W MI G + AL ++ M + PD+ TFV
Sbjct: 677 NSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFV 736
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
L AC+ + G E L+ G + ++DM + G + + ++ M
Sbjct: 737 SALRACAVVSSIKDGTETHSLI-FHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSR 795
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+ + + W +++ +G + A RVF
Sbjct: 796 KKDVISWNSMIVGFAKNGYAE----DALRVF 822
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 60/425 (14%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH KLG +G+ +V+ Y KC ++ A + F++L +D++ WN++++ +++
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G H ++ F + G+W + FT VLS+ + K GR VH VVKMG++S
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALI MY K + +A IF+ E D SW S++ + + G + +++F M G +
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258
Query: 334 PDLVTFSTVLPA---------CSHLAALMHGRQIHGY-IVVNGLAKNG------------ 371
PD V F TV+ A S L + M R + + ++++G AK G
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNM 318
Query: 372 --------------------SCKDID----------------DVFMNNALMDMYTKCGSM 395
S +D +V++ ++L+ MY KCG M
Sbjct: 319 RKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKM 378
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+ VF +++++V WN M+ GY +G E +++F M PD+ T+ +LSAC
Sbjct: 379 EAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSAC 438
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ +L G + ++ + + ++DM ++G L +A + + N N V
Sbjct: 439 ACLKYLDLGHQLHSVI-IKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDN-VS 496
Query: 516 WRTLL 520
W ++
Sbjct: 497 WNVII 501
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 152/338 (44%), Gaps = 27/338 (7%)
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
F +++H +K+G+ S + N ++D+Y K V A F+ +E+KDI +WNSI++
Sbjct: 74 FSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILS 133
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+H + G ++ F + ++G P+ TF+ VL +C+ L + GRQ+H +V G
Sbjct: 134 MHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFES 193
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
C+ AL+ MY KC + DA+ +F + D SW MI GY G +EA
Sbjct: 194 ISYCE--------GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEA 245
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ +F M + +PD+V FV V++A G L + M +R V + +I
Sbjct: 246 VKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA-----WNLMIS 300
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ G EA E M TL S L LA + + E G
Sbjct: 301 GHAKGGYGVEAIEFFQNMRKAGIKSTRSTL--GSVLSAIASLAALDFGLLVHAEALKQG- 357
Query: 550 YVLMSNIYVAG---------GKYEEVLDIRHTMRQQNV 578
L SN+YV GK E + T+ +QNV
Sbjct: 358 --LHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNV 393
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT +++L+ CA ++++ G E HS + TG L+ ++L++MY+KC +K ++ VF
Sbjct: 733 ATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKE 792
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S + +V ++N+MI GF N +A L F+ M+Q V PD TF ++ C V E
Sbjct: 793 MSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSE 852
Query: 153 VKKIHGLVFKL 163
+ I ++ L
Sbjct: 853 GRLIFDMMVNL 863
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 322/580 (55%), Gaps = 13/580 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++++ CA ++ G+++H+ +++ + +L+ MYSK + +F + E
Sbjct: 147 STVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMR-E 205
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEV-K 154
+ ++ ++I+GF + L F M G+ P+++ F + C V+ LE +
Sbjct: 206 KDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSAC-GVLGSLEYGE 264
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IH L K LD + Y G +L + Y +C+ +E A +VF + D+V WN+++N + G
Sbjct: 265 QIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEG 324
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A+ + M G+ TV G+L A + ++GR++H +VK+G D V V N
Sbjct: 325 LLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCN 384
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L+ MY + A+++F ++D+ +WNSI+T Q + + +LF+ + +
Sbjct: 385 SLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSL 444
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D ++ + VL A + L +Q+H GL ++D ++N L+D Y KCGS
Sbjct: 445 DRISLNNVLSASAELGYFEMVKQVHTCTFKVGL--------VNDTMLSNGLIDTYAKCGS 496
Query: 395 MRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DA +F M + DV SW+ +I+GY G ++ALD+F+ M ++P+ VTFVGVL+
Sbjct: 497 LDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLT 556
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACS G + +G + +ME +GV+PT EH +CVID+L RAG+L EA + MP E +
Sbjct: 557 ACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDI 616
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
V+W+TLLA S+ H + ++ AA+ + ++P H YVL+ NIY A G + E ++ M
Sbjct: 617 VMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAM 676
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
R V+K+PG SW++LK L FI DRSHPE++ IY L
Sbjct: 677 RSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTML 716
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 235/524 (44%), Gaps = 16/524 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT---GIIDSPLSITSLINMYSKCCQMKY 85
P + AT A L C+ L G +H ++L + ++ + + LI MY +C +
Sbjct: 35 PLSAATYAALLATCSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPES 94
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + + N ++ ++I+ N + L F+ M + G PD++ ++ C
Sbjct: 95 ARLVFDEMPAK-NPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACA 153
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
++ + +++H K D+ + +ALV Y K + + +F + +D + W +
Sbjct: 154 ELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGS 213
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ G+AQ G +AL++FR M EG+ + F V SA ++G + G +H + VK
Sbjct: 214 IIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKY 273
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
D +L DMY + K + A +F ++ D+ SWNSI+ G + L
Sbjct: 274 RLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLL 333
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +G +PD +T +L AC A+ HGR +H Y+V GL DV + N+
Sbjct: 334 SEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLD--------GDVSVCNS 385
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY +C A VF + +DV +WN ++ + +F+ + + D
Sbjct: 386 LLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLD 445
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
++ VLSA + G+ ++ + + G+V +ID + G L++A +L
Sbjct: 446 RISLNNVLSASAELGYFEMVKQ-VHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLF 504
Query: 505 LAMPNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGH 546
M ++ W +L+ G L A R + P H
Sbjct: 505 EMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNH 548
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 52/586 (8%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S ++ Y + C++ A +F+ L E +V ++N+++SG+ N + + + F++M
Sbjct: 112 FSWNVMLTGYVRNCRLGDARRLFD-LMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM-- 168
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG--LVFKLGLDLDVYIGSALVNTYLKCQFM 185
P+K + I + A + +I L+F+ D D+ + L+ +++ + +
Sbjct: 169 ----PEKNS----ISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
+A +F+++P+RD + WN M++GYAQ G +A RR+ E FT T ++S
Sbjct: 221 GDARWLFDKMPVRDAISWNTMISGYAQGGGLSQA----RRLFDESPTRDVFTWTAMVSGY 276
Query: 246 IMMGFFKNGR----------------VVHGIVVKMGYD-----------SGVPVMNALID 278
+ G + ++ G V D + N +I
Sbjct: 277 VQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMIT 336
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
YG+ + +A + F+MM ++D SW +I+ + Q G+++ L +F + G + T
Sbjct: 337 GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F L C+ +AAL G+QIHG V G F+ NAL+ MY KCGS+ +A
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTG--------CFVGNALLAMYFKCGSIDEA 448
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F + +KDV SWN M+ GY G G++AL +F M A +KPDE+T VGVLSACSH+
Sbjct: 449 NDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT 508
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G E+ M YGV+PT +HYTC+ID+LGRAG+L EA +L MP + W
Sbjct: 509 GLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGA 568
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL ASR+HGNT+L E AA+ VF++EP + G YVL+SN+Y A G++ + +R MR V
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGV 628
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PG SW+E+++ +HTF D SHPE + IYA L L ++RE G
Sbjct: 629 QKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEG 674
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 207/465 (44%), Gaps = 81/465 (17%)
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
AL VFN + +V +YNAMISG+ N + F+ M P++
Sbjct: 68 ALHVFNTMPRRSSV-SYNAMISGYLRNSKFNLARNLFDQM------PER----------- 109
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
D++ + ++ Y++ + +A ++F+ +P +DVV WN+
Sbjct: 110 ----------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG-IVVKM 264
+++GYAQ G +A EVF M ++ + + G+L+A + NGR+ ++ +
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPEK----NSISWNGLLAA-----YVHNGRIEEACLLFES 198
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
D + N L+ + + K +G+A +F+ M +D SWN++++ + Q G RLF
Sbjct: 199 KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLF 258
Query: 325 DR-----------MLSAGFQPDLV----TFSTVLPACSHLAALMHGRQIHGYI------V 363
D M+S Q ++ TF +P + ++ + I GY+ +
Sbjct: 259 DESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS---YNAMIAGYVQTKKMDI 315
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L ++ C++I N ++ Y + G + A+ F M ++D SW +I GY
Sbjct: 316 ARELFESMPCRNISSW---NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQS 372
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIE 482
G +EAL+MF + + + TF LS C+ L G++ ++ YG +
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ ++ M + G ++EA + + E + V W T+LA HG
Sbjct: 433 N--ALLAMYFKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHG 474
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 183/425 (43%), Gaps = 75/425 (17%)
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + ++T+++ + AL VF +P R V +NAM++GY + +F+ A +F +
Sbjct: 46 DPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQ 105
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + ++ +T G+ +N R
Sbjct: 106 MPERDLFSWNVMLT---------GYVRNCR------------------------------ 126
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+G+A +F++M EKD+ SWNS+++ + Q G D +FD M + + ++++ +L A
Sbjct: 127 LGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAA 182
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
H +GR ++ K D+ N LM + + + DA+ +F KM
Sbjct: 183 YVH-----NGRIEEACLLF-------ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKM 230
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+D SWN MI GY G +A +F + D T+ ++S +G L + +
Sbjct: 231 PVRDAISWNTMISGYAQGGGLSQARRLF----DESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
F M + V Y +I + +++ A EL +MP N W T++
Sbjct: 287 TFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFESMPCR-NISSWNTMIT---- 336
Query: 526 HGNTDLAEIA-AQRVFQLEPGH-CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV---RK 580
G + +IA A++ F + P C ++ + Y G YEE L++ ++Q R
Sbjct: 337 -GYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRA 395
Query: 581 NPGCS 585
GC+
Sbjct: 396 TFGCA 400
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 38/140 (27%)
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
++G L G E+ M Y V PT +HYTC+ID+LGR +L E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL ASR+HGNT+L E AAQ F++ P + G MR
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSG---------------------ISKMRDV 857
Query: 577 NVRKNPGCSWIELKDGLHTF 596
V+K PG SW E+++ +HTF
Sbjct: 858 GVQKVPGYSWFEVQNKIHTF 877
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT +L CA L+ G++IH ++ G +L+ MY KC + A F
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG 454
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E +V ++N M++G+ + F + L F M+ GV PD+ T ++ C +L+
Sbjct: 455 IE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHT-GLLD 512
Query: 153 --VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAM--- 206
+ + + G+ + +++ + +EEA + +P + W A+
Sbjct: 513 RGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGA 572
Query: 207 --VNGYAQIGEFHKALEVFRRMSKE 229
++G ++GE KA E+ +M +
Sbjct: 573 SRIHGNTELGE--KAAEMVFKMEPQ 595
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/585 (32%), Positives = 336/585 (57%), Gaps = 16/585 (2%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
AH +L + +H+ ++++G S L LI+ Y KC + A +F+ L ++ T+
Sbjct: 12 AHTKSLTTLRAVHTNVIKSGFSYSFLG-HKLIDGYIKCGSLAEARKLFDELPSR-HIVTW 69
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
N+MIS S+ + + ++F+ +M GVLPD YTF + K + + ++ HGL
Sbjct: 70 NSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVV 129
Query: 163 LGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
LGL+ LD ++ SALV+ Y K M +A VF + +DVVL+ A++ GYAQ G +AL+
Sbjct: 130 LGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALK 189
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F M G+ + +T+ +L +G NG+++HG+VVK G +S V +L+ MY
Sbjct: 190 IFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYS 249
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+ + +++++F ++ + +W S + Q G + + +F M+ P+ T S+
Sbjct: 250 RCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSS 309
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L ACS LA L G QIH + GL N + AL+++Y KCG+M A+ V
Sbjct: 310 ILQACSSLAMLEVGEQIHAITMKLGLDGNK--------YAGAALINLYGKCGNMDKARSV 361
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +++ DV + N MI Y +G G EAL++F + L P+ VTF+ +L AC+++G +
Sbjct: 362 FDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLV 421
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP--VVWRTL 519
+G + + + + + TI+H+TC+ID+LGR+ +L EA A+ + NP V+WRTL
Sbjct: 422 EEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEA---AMLIEEVRNPDVVLWRTL 478
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L + ++HG ++AE ++ +L PG G ++L++N+Y + GK+ +V++++ T+R ++
Sbjct: 479 LNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLK 538
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K+P SW+++ +HTF++ D SHP + I+ LH L +++ G
Sbjct: 539 KSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLG 583
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 11/304 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ +TLA CI L C + +L GQ IH ++++G+ S TSL+ MYS+C ++ ++
Sbjct: 202 NEYTLA-CI--LINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSI 258
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VFN L N T+ + + G N + F M + + P+ +T +++ C
Sbjct: 259 KVFNQLDY-ANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSS- 316
Query: 148 MAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+A+LEV ++IH + KLGLD + Y G+AL+N Y KC M++A VF+ L DVV N+M
Sbjct: 317 LAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSM 376
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMG 265
+ YAQ G H+ALE+F R+ G+ + T +L A G + G ++ I
Sbjct: 377 IYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHN 436
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ + +ID+ G+ + + EA + E + D+ W +++ C H G + + +
Sbjct: 437 IELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLN---SCKIH-GEVEMAE 492
Query: 326 RMLS 329
+++S
Sbjct: 493 KVMS 496
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 339/630 (53%), Gaps = 68/630 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
N + +H+ +++ G + + L+N+Y+K ++ A +F + + +VF++ +I
Sbjct: 303 NYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIP-QTDVFSWTVLI 359
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-IHGLVFKLGL 165
SGF + L F M+ GV P+++T ++K C + + K IHG + + GL
Sbjct: 360 SGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGL 419
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR- 224
DLD + +++++ Y+KC+ A K+F + +D V WN M++ Y QIG+ K++++FR
Sbjct: 420 DLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQ 479
Query: 225 ------------------------------RMSKEGIWMSRFTVTGVL---SALIMMGFF 251
+M G ++ T + L S+L ++G
Sbjct: 480 LPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGL- 538
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK------------ 299
G+ +H V+K+G V N+LIDMY K + +A IF+ + ++
Sbjct: 539 --GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDD 596
Query: 300 ---DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+ SW+S+++ + Q G + L+ F M+ + + D T ++V+ AC+ L GR
Sbjct: 597 AVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGR 656
Query: 357 QIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
Q+HGYI + +GL DVF+ ++++DMY KCGS+ DA ++F + ++V W
Sbjct: 657 QVHGYIQKIGHGL----------DVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWT 706
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI G + GQG+EA+ +F M + P+EV+FVGVL+ACSH+G L +G ++ LM
Sbjct: 707 SMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREV 766
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
YG+ P EH+TC++D+ GRAG+LNE E VWR+ L++ R+H N ++
Sbjct: 767 YGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIW 826
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
+++ +LEP G Y+L S+I ++EE IR M+Q+ V+KNP SWI+LK+ +H
Sbjct: 827 VCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVH 886
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHG 624
+F+ DRSHP+ IY+ L L RL+E G
Sbjct: 887 SFVMGDRSHPQDTKIYSYLDELIGRLKEIG 916
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 154/305 (50%), Gaps = 41/305 (13%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TF+ LA+ ++ L L G++IH+ +L+ G++D SLI+MY KC +M+
Sbjct: 522 TFSIALVLASSLSVLGL---------GKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEME 572
Query: 85 YALFVFNNL-----------SCEPNV---FTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
A +F +L SC+ V ++++M+SG+ N L F+ M V
Sbjct: 573 KASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQV 632
Query: 131 LPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
DK+T ++ C VLE+ +++HG + K+G LDV++GS++++ Y+KC + +A
Sbjct: 633 EVDKFTLTSVVSACASA-GVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAW 691
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F + R+VVLW +M++G A G+ +A+ +F M EGI + + GVL+A G
Sbjct: 692 LIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAG 751
Query: 250 FFKNG-------RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ G R V+GI G ++D+YG+ G EI E + I
Sbjct: 752 LLEEGCKYFRLMREVYGI------RPGAEHFTCMVDLYGRA---GRLNEIKEFIHNNAIS 802
Query: 303 SWNSI 307
+S+
Sbjct: 803 KLSSV 807
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 322/602 (53%), Gaps = 10/602 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+ F+ T L + H + + G+ IH +++ G +L+ MY+ +
Sbjct: 236 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF + + ++ ++N++++ F ++ + L M G + TF +
Sbjct: 296 VEANLVFKQMPTK-DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + +HGLV GL + IG+ALV+ Y K M E+ +V ++P RDVV W
Sbjct: 355 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 414
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVV 262
NA++ GYA+ + KAL F+ M EG+ + TV VLSA ++ G + G+ +H +V
Sbjct: 415 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 474
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G++S V N+LI MY K + + ++F ++ ++I +WN+++ + G+ + L+
Sbjct: 475 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 534
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
L +M S G D +FS L A + LA L G+Q+HG V G D F+
Sbjct: 535 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH--------DSFIF 586
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NA DMY+KCG + + + + + SWNI+I G G +E F M E +K
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P VTFV +L+ACSH G + +G + ++ +G+ P IEH CVID+LGR+G+L EA
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 706
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
MP + N +VWR+LLA+ ++HGN D AA+ + +LEP YVL SN++ G+
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 766
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+E+V ++R M +N++K CSW++LKD + +F DR+HP+ IYA+L + ++E
Sbjct: 767 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 826
Query: 623 HG 624
G
Sbjct: 827 SG 828
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 234/469 (49%), Gaps = 25/469 (5%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKI 156
N ++N M+SG +G++FF M LG+ P + L+ C ++ E ++
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG V K GL DVY+ +A+++ Y + + KVFEE+P R+VV W +++ GY+ GE
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ +++++ M EG+ + +++ V+S+ ++ GR + G VVK G +S + V N+L
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSL 184
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I M G V A IF+ M E+D SWNSI + Q G+ + + R+F M + +
Sbjct: 185 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 244
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF-MNNALMDMYTKCGSM 395
T ST+L H+ GR IHG +V G D V + N L+ MY G
Sbjct: 245 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF---------DSVVCVCNTLLRMYAGAGRS 295
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A +VF +M KD+ SWN ++ + DG+ +AL + M + + VTF L+AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI-----DMLGRAGQLNEAYELALAMPNE 510
F +GR L VV + Y +I M G+ G+++E+ + L MP
Sbjct: 356 FTPDFFEKGRILHGL------VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR 409
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ V W L+ + D A +AA + ++E G NY+ + ++ A
Sbjct: 410 -DVVAWNALIGGYAEDEDPDKA-LAAFQTMRVE-GVSSNYITVVSVLSA 455
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 238/504 (47%), Gaps = 24/504 (4%)
Query: 51 GQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G++I ++++G+ +S L++ SLI+M + YA ++F+ +S E + ++N++ + +
Sbjct: 162 GRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAY 219
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N + F+ MR+ + T L+ V + IHGLV K+G D V
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ + L+ Y EA VF+++P +D++ WN+++ + G AL + M
Sbjct: 280 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 339
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G ++ T T L+A FF+ GR++HG+VV G + NAL+ MYGK + E+
Sbjct: 340 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 399
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+ M +D+ +WN+++ + + + D L F M G + +T +VL AC
Sbjct: 400 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 459
Query: 350 AALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L+ G+ +H YIV G D + N+L+ MY KCG + +Q +F + +
Sbjct: 460 GDLLERGKPLHAYIVSAGFES--------DEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 511
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
++ +WN M+ G G+E L + S M + D+ +F LSA + L +G++
Sbjct: 512 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Query: 469 PLMESRYGVVPTIEH----YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
L V EH + DM + G++ E ++ N + P W L++A
Sbjct: 572 GL-----AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILISALG 625
Query: 525 LHGNTDLAEIAAQRVFQL--EPGH 546
HG + + ++ +PGH
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGH 649
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 161/333 (48%), Gaps = 19/333 (5%)
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKN 253
+P+R+ V WN M++G ++G + + +E FR+M GI S F + +++A G F+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G VHG V K G S V V A++ +YG V + ++FE M ++++ SW S+M +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G + + ++ M G + + S V+ +C L GRQI G +V +GL
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK--- 177
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ + N+L+ M G++ A +F +MS++D SWN + Y +G +E+ +F
Sbjct: 178 -----LAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
S M + + T +LS H GR L+ V + CV + L R
Sbjct: 233 SLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSVVCVCNTLLR 287
Query: 494 ----AGQLNEAYELALAMPNEANPVVWRTLLAA 522
AG+ EA + MP + + + W +L+A+
Sbjct: 288 MYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 312/580 (53%), Gaps = 13/580 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+ C +L G+ H M RT S++ MY KC + A VF+ + E N
Sbjct: 17 FEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMR-ERN 75
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +IS + N KG F++M +L P+ T+ ++ + + K+IH
Sbjct: 76 LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ GL + + +A+ N Y+KC ++E A VFE++ ++ V W ++ GY Q
Sbjct: 136 HAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F +M EG+ + + + VL A + GR +HG +VK+G +S V V L+D
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + A + FE + E + SW++++T + Q G + L+ F+ + + + T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLA--KNGSCKDIDDVFMNNALMDMYTKCGSMR 396
++++ ACS LA G Q H + + L ++G +A++ MY++CG +
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG----------ESAMITMYSRCGRLD 365
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A VF + D +W +I GY G EAL +F M + ++P+ VTF+ VL+ACS
Sbjct: 366 YATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACS 425
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG + +GR++L M S YGV TI+HY C++D+ RAG L EA EL +MP + + W
Sbjct: 426 HSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSW 485
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+ LL + N ++ E+AA+ +FQL+P Y+LM N+Y + GK++E ++R M ++
Sbjct: 486 KCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAER 545
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
N+RK CSWI +K +H FI D+ HP+ + IY++L +L
Sbjct: 546 NLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEAL 585
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 204/392 (52%), Gaps = 17/392 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T I L+ + + L+ G++IHS+ +R+G+ + T++ NMY KC ++ A VF
Sbjct: 112 STYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEK 171
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S E N + ++ G+ + L F M GV D+Y F ++K C + +
Sbjct: 172 MS-EKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNF 230
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++IHG + KLGL+ +V +G+ LV+ Y+KC +E A K FE + + V W+A++ GY Q
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ 290
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK---MGYDSG 269
+GEF +AL+ F + + ++ FT T + A + F +G H +K + Y G
Sbjct: 291 MGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+A+I MY + + A +FE +++ D +W +I+ + GN L+LF RM
Sbjct: 351 ---ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD 407
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN-GSCKDIDDVFMNNALMDM 388
G +P+ VTF VL ACSH ++ GRQ + ++ N G ID + ++D+
Sbjct: 408 CGVRPNAVTFIAVLTACSHSGLVIEGRQ-----YLESMSSNYGVATTIDHY---DCMVDI 459
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
Y++ G +++A + M D SW ++ G
Sbjct: 460 YSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/558 (33%), Positives = 314/558 (56%), Gaps = 11/558 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C ++++G IH + + GI + L++MY K + +F+ +
Sbjct: 282 LRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDA 341
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N MI G+ + + F M PD T +++ C + + K +H
Sbjct: 342 V-SWNTMICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHD 399
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G + D + L+N Y KC + + +VF + +D V WN+M+N Y Q G F +
Sbjct: 400 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDE 459
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+++F+ M K + T +LS +G G+ +H + KMG++S + V N L+D
Sbjct: 460 AMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVD 518
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +G++L++FE M+ +DI +WN+I+ + + LR+ RM + G PD+ T
Sbjct: 519 MYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMAT 578
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
++LP CS LAA G++IHG I GL DV + N L++MY+KCGS+R++
Sbjct: 579 MLSILPVCSLLAAKRQGKEIHGCIFKLGLES--------DVPVGNVLIEMYSKCGSLRNS 630
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
VF M KDV +W +I GM G+GK+A+ F M A + PD V FV ++ ACSHS
Sbjct: 631 FQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHS 690
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G + M+ Y + P IEHY CV+D+L R+ L++A + L+MP + + +W
Sbjct: 691 GLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGA 750
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A R+ G+T++A+ ++R+ +L P G YVL+SN+Y A GK+++V IR +++ + +
Sbjct: 751 LLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGL 810
Query: 579 RKNPGCSWIELKDGLHTF 596
+K+PGCSW+E+++ ++ F
Sbjct: 811 KKDPGCSWMEIQNKVYVF 828
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 270/493 (54%), Gaps = 16/493 (3%)
Query: 31 TLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
TL + I+ +L A T L K +HS ++ G+ S + LI Y+ + V
Sbjct: 73 TLFSSISRALASAATTTQLHK---LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSV 129
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F S NV+ +N++I N + L ++ +++ + PD YTFP +I C ++
Sbjct: 130 FRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLD 189
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
K IH V +G D+YIG+AL++ Y + +++A KVFEE+PLRDVV WN++++G
Sbjct: 190 FEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 249
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y G +++ALE++ R G+ +T++ VL A +G + G ++HG++ K+G
Sbjct: 250 YNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKD 309
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V N L+ MY K + + IF+ M +D SWN+++ + Q G ++ +++LF M++
Sbjct: 310 VIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVN 369
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
F+PDL+T +++L AC HL L G+ +H Y++ +G C D +N L++MY
Sbjct: 370 Q-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY----EC----DTTASNILINMY 420
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG++ +Q VF+ M KD SWN MI Y +G EA+ +F M + +KPD VT+V
Sbjct: 421 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYV 479
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LS + G L G+E L ++ G I ++DM + G++ ++ ++ M
Sbjct: 480 MLLSMSTQLGDLXLGKE-LHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 538
Query: 510 EANPVVWRTLLAA 522
+ + W T++A+
Sbjct: 539 R-DIITWNTIIAS 550
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 211/426 (49%), Gaps = 18/426 (4%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L T + LQ C H +L+ G+ +H YM+ +G + LINMY+KC + + VF+
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFS 434
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ C+ +V ++N+MI+ + N + + F M+ V PD T+ L+ + +
Sbjct: 435 GMKCKDSV-SWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLX 492
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H + K+G + ++ + + LV+ Y KC M ++LKVFE + RD++ WN ++
Sbjct: 493 LGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCV 552
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ + L + RM EG+ T+ +L ++ + G+ +HG + K+G +S VP
Sbjct: 553 HSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 612
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N LI+MY K + + ++F++M+ KD+ +W ++++ G +R F M +AG
Sbjct: 613 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 672
Query: 332 FQPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
PD V F ++ ACSH + G ++ + ++ +C + D+ +AL+D
Sbjct: 673 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYAC--VVDLLSRSALLD 730
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+ + + K D + W ++ M G + A + + E L PD+
Sbjct: 731 --------KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIE--LNPDDTG 780
Query: 448 FVGVLS 453
+ ++S
Sbjct: 781 YYVLVS 786
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 199/417 (47%), Gaps = 17/417 (4%)
Query: 121 FFNHMRQLGVLPD---KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
F M+ L VL + + F + + ++ K+H L+ LGL V + L+
Sbjct: 56 FSRVMKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIA 115
Query: 178 TYLKCQFMEEALKVFE-ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
Y + + VF P +V WN+++ G F +AL ++ + + +
Sbjct: 116 KYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTY 175
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T V++A + F+ + +H V+ MG+ S + + NALIDMY + + +A ++FE M
Sbjct: 176 TFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM 235
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D+ SWNS+++ + G + L ++ R + G PD T S+VL AC L ++ G
Sbjct: 236 PLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGD 295
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
IHG I G+ K DV +NN L+ MY K + D + +F KM +D SWN M
Sbjct: 296 IIHGLIEKIGIKK--------DVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM-ESRY 475
I GY G +E++ +F M + KPD +T +L AC H G L G+ M S Y
Sbjct: 348 ICGYSQVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 406
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
T + +I+M + G L + E+ M + + V W +++ +G+ D A
Sbjct: 407 ECDTTASN--ILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNGSFDEA 460
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 323/594 (54%), Gaps = 69/594 (11%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ Y K + A +FN + E +V ++NAM+SGF N F + F+ M
Sbjct: 123 ISWNVMLSGYVKNGNLSAARALFNQMP-EKDVVSWNAMLSGFAQNGFVEEARKIFDQM-- 179
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
++ ++ ++ L+ + + +++ F +D ++ + L+ Y++ + +++
Sbjct: 180 --LVKNEISWNGLLSAYVQNGRIEDARRL----FDSKMDWEIVSWNCLMGGYVRKKRLDD 233
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+ +P+RD + WN M+ GYAQ G +A +F + + F T ++S
Sbjct: 234 ARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAMVS---- 285
Query: 248 MGFFKNGRVVHG--IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
GF +NG + I +M + V NA+I Y + + + +A E+F+ M ++ SWN
Sbjct: 286 -GFVQNGMLDEATRIFEEMPEKNEVS-WNAMIAGYVQSQQIEKARELFDQMPSRNTSSWN 343
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV----------------------- 342
+++T + QCGN D LFD M Q D ++++ +
Sbjct: 344 TMVTGYAQCGNIDQAKILFDEMP----QRDCISWAAMISGYAQSGQSEEALHLFIKMKRD 399
Query: 343 ------------LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
L +C+ +AAL G+Q+HG +V G NAL+ MY
Sbjct: 400 GGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTG--------YIAGNALLAMYG 451
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ +A VF +++KD+ SWN MI GY G GKEAL +F M + +KPD+VT VG
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVG 510
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH+G + +G E+ M YG+ +HYTC+ID+LGRAG+L+EA L +MP
Sbjct: 511 VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
+ W LL ASR+HG+T+L E AA++VF++EP + G YVL+SN+Y A G++ EV ++R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR + V+K PG SW+E+++ H F D SHPEA+ IYA L L L++ G
Sbjct: 631 SKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDG 684
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 214/492 (43%), Gaps = 66/492 (13%)
Query: 52 QEIHSYMLRTGIIDSPL-SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
Q++ S + I+DS + I+ Y + Q + AL VFN + V TYNAMISG+
Sbjct: 44 QKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTV-TYNAMISGYL 102
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
SN+ F C K VF+ D D+
Sbjct: 103 SNN----------------------KFDCARK-----------------VFEKMPDRDLI 123
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +++ Y+K + A +F ++P +DVV WNAM++G+AQ G +A ++F +M
Sbjct: 124 SWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQM---- 179
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + + G+LSA + G ++ R + KM ++ + N L+ Y + K + +A
Sbjct: 180 LVKNEISWNGLLSAYVQNGRIEDARRLFD--SKMDWE--IVSWNCLMGGYVRKKRLDDAR 235
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------MLSAGFQPDLVTF 339
+F+ M +D SWN ++T + Q G RLF+ M+S Q ++
Sbjct: 236 SLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDE 295
Query: 340 ST-VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD---IDDVFMNNALMDMYTKCGSM 395
+T + + I GY+ + K D + N ++ Y +CG++
Sbjct: 296 ATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNI 355
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+++F +M ++D SW MI GY GQ +EAL +F M + LS+C
Sbjct: 356 DQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSC 415
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ L G++ + + G ++ M G+ G + EA+++ E + V
Sbjct: 416 AEIAALELGKQLHGRL-VKAGFQTGYIAGNALLAMYGKCGSIEEAFDV-FEDITEKDIVS 473
Query: 516 WRTLLAASRLHG 527
W T++A HG
Sbjct: 474 WNTMIAGYARHG 485
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 92/185 (49%), Gaps = 9/185 (4%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L CA L+ G+++H +++ G ++ +L+ MY KC ++ A VF +++ E
Sbjct: 411 ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDIT-EK 469
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKI 156
++ ++N MI+G+ + F + L F M+ + + PD T ++ C V + ++
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYF 528
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAM-----VNGY 210
+ + G+ + + +++ + ++EAL + + +P D W A+ ++G
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588
Query: 211 AQIGE 215
++GE
Sbjct: 589 TELGE 593
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 322/602 (53%), Gaps = 10/602 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+ F+ T L + H + + G+ IH +++ G +L+ MY+ +
Sbjct: 253 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 312
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF + + ++ ++N++++ F ++ + L M G + TF +
Sbjct: 313 VEANLVFKQMPTK-DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 371
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + +HGLV GL + IG+ALV+ Y K M E+ +V ++P RDVV W
Sbjct: 372 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 431
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVV 262
NA++ GYA+ + KAL F+ M EG+ + TV VLSA ++ G + G+ +H +V
Sbjct: 432 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 491
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G++S V N+LI MY K + + ++F ++ ++I +WN+++ + G+ + L+
Sbjct: 492 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 551
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
L +M S G D +FS L A + LA L G+Q+HG V G D F+
Sbjct: 552 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH--------DSFIF 603
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NA DMY+KCG + + + + + SWNI+I G G +E F M E +K
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P VTFV +L+ACSH G + +G + ++ +G+ P IEH CVID+LGR+G+L EA
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 723
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
MP + N +VWR+LLA+ ++HGN D AA+ + +LEP YVL SN++ G+
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 783
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+E+V ++R M +N++K CSW++LKD + +F DR+HP+ IYA+L + ++E
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 843
Query: 623 HG 624
G
Sbjct: 844 SG 845
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 148/491 (30%), Positives = 246/491 (50%), Gaps = 26/491 (5%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MY+K ++K A +F+ + N ++N M+SG +G++FF M LG+ P +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVR-NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59
Query: 136 TFPCLIKCCCDVMAVL-EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
L+ C ++ E ++HG V K GL DVY+ +A+++ Y + + KVFEE
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R+VV W +++ GY+ GE + +++++ M EG+ + +++ V+S+ ++ G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R + G VVK G +S + V N+LI M G V A IF+ M E+D SWNSI + Q
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G+ + + R+F M + + T ST+L H+ GR IHG +V G
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF------- 292
Query: 375 DIDDVF-MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
D V + N L+ MY G +A +VF +M KD+ SWN ++ + DG+ +AL +
Sbjct: 293 --DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLL 350
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI----- 488
M + + VTF L+AC F +GR L VV + Y +I
Sbjct: 351 CSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL------VVVSGLFYNQIIGNALV 404
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
M G+ G+++E+ + L MP + V W L+ + D A +AA + ++E G
Sbjct: 405 SMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGYAEDEDPDKA-LAAFQTMRVE-GVSS 461
Query: 549 NYVLMSNIYVA 559
NY+ + ++ A
Sbjct: 462 NYITVVSVLSA 472
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 238/504 (47%), Gaps = 24/504 (4%)
Query: 51 GQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G++I ++++G+ +S L++ SLI+M + YA ++F+ +S E + ++N++ + +
Sbjct: 179 GRQIIGQVVKSGL-ESKLAVENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAY 236
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N + F+ MR+ + T L+ V + IHGLV K+G D V
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ + L+ Y EA VF+++P +D++ WN+++ + G AL + M
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G ++ T T L+A FF+ GR++HG+VV G + NAL+ MYGK + E+
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+ M +D+ +WN+++ + + + D L F M G + +T +VL AC
Sbjct: 417 RRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLP 476
Query: 350 AALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L+ G+ +H YIV G D + N+L+ MY KCG + +Q +F + +
Sbjct: 477 GDLLERGKPLHAYIVSAGFES--------DEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 528
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
++ +WN M+ G G+E L + S M + D+ +F LSA + L +G++
Sbjct: 529 NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Query: 469 PLMESRYGVVPTIEH----YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
L V EH + DM + G++ E ++ N + P W L++A
Sbjct: 589 GL-----AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP-SWNILISALG 642
Query: 525 LHGNTDLAEIAAQRVFQL--EPGH 546
HG + + ++ +PGH
Sbjct: 643 RHGYFEEVCATFHEMLEMGIKPGH 666
>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
Length = 638
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 328/622 (52%), Gaps = 19/622 (3%)
Query: 9 NPFSSCFNFSTS---SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIID 65
N F S N ++ SG H TC LQ C+ GQ+ H ++++ G +
Sbjct: 20 NEFESALNIASEMHKSGEALNEH-----TCSVILQACSSPDYRIFGQQFHCFVIKCGFDE 74
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
+ + TSLI MY++ A VF++++C+ +V +N MI + K + F +M
Sbjct: 75 NVVVGTSLIAMYTRSKLFGDAEKVFDSMACK-DVRCFNFMILEYARAGNGEKAIRVFINM 133
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
G+ P+ YTF +I C + + E ++ GL FK G + IG+A++N Y K
Sbjct: 134 LNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMA 193
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
EA ++F + R+++ W A+++GY + G+ KA++ F + G+ +T +L
Sbjct: 194 REAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGC 253
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ G +HG+V+K+GY V + AL+D+Y K + A +F+ + K I S+N
Sbjct: 254 SECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFN 313
Query: 306 SIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+I+ + + + LF+ G +PD+VTFS +L ++ + L GR H Y +
Sbjct: 314 AILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAI 373
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
G D+ + NA++ MY KCGS+ +A +F M+ D SWN MI Y +
Sbjct: 374 KTGFEA--------DLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALH 425
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
GQG + L +F M + + PDE+T + +L AC++SG G +ME +YG+ P +EH
Sbjct: 426 GQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEH 485
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
Y C++D+LGRAG L+EA ++ P + ++WRTL+ +L G+ + ++A++ + +L
Sbjct: 486 YACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLELS 545
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
P G+Y+L+SN+Y +E +R M + K G SWIE+ D +H F++S + H
Sbjct: 546 PVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEIDDKVHHFVASGKDH 605
Query: 604 PEAKSIYAELHSLTARLREHGD 625
PE+ IYAEL L +R D
Sbjct: 606 PESNEIYAELDLLRDDMRWRYD 627
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 9/304 (2%)
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
+R+ + W +++ GY EF AL + M K G ++ T + +L A + G+
Sbjct: 3 VRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQ 62
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
H V+K G+D V V +LI MY + K G+A ++F+ M KD+ +N ++ + + GN
Sbjct: 63 FHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGN 122
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ +R+F ML+AG QP+ TF+ ++ AC + G Q G G +
Sbjct: 123 GEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGF--------L 174
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
++ + NA+++MY K G R+A+ +F+ M+ +++ SW +I GY G GK+A+D F +
Sbjct: 175 NETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMEL 234
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ D +L CS L G + L+ + G + T ++D+ + G
Sbjct: 235 HLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLV-IKLGYACAVNIGTALVDLYAKCGN 293
Query: 497 LNEA 500
L A
Sbjct: 294 LMSA 297
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/602 (32%), Positives = 322/602 (53%), Gaps = 10/602 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+ F+ T L + H + + G+ IH +++ G +L+ MY+ +
Sbjct: 343 RRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 402
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF + + ++ ++N++++ F ++ + L M G + TF +
Sbjct: 403 VEANLVFKQMPTK-DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 461
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C + + +HGLV GL + IG+ALV+ Y K M E+ +V ++P RDVV W
Sbjct: 462 CFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAW 521
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVV 262
NA++ GYA+ + KAL F+ M EG+ + TV VLSA ++ G + G+ +H +V
Sbjct: 522 NALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIV 581
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G++S V N+LI MY K + + ++F ++ ++I +WN+++ + G+ + L+
Sbjct: 582 SAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLK 641
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
L +M S G D +FS L A + LA L G+Q+HG V G D F+
Sbjct: 642 LVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH--------DSFIF 693
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
NA DMY+KCG + + + + + SWNI+I G G +E F M E +K
Sbjct: 694 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 753
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P VTFV +L+ACSH G + +G + ++ +G+ P IEH CVID+LGR+G+L EA
Sbjct: 754 PGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAET 813
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
MP + N +VWR+LLA+ ++HGN D AA+ + +LEP YVL SN++ G+
Sbjct: 814 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 873
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+E+V ++R M +N++K CSW++LKD + +F DR+HP+ IYA+L + ++E
Sbjct: 874 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKE 933
Query: 623 HG 624
G
Sbjct: 934 SG 935
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 247/516 (47%), Gaps = 51/516 (9%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ +H+ ++ + S L +LINMY+K ++K A +F+ + N ++N M+SG
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVR-NEVSWNTMMSGIV 149
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKIHGLVFKLGLDLDV 169
+G++FF M LG+ P + L+ C ++ E ++HG V K GL DV
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 209
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
Y+ +A+++ Y + + KVFEE+P R+VV W +++ GY+ GE + +++++ S
Sbjct: 210 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESL- 268
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
GR + G VVK G +S + V N+LI M G V A
Sbjct: 269 ------------------------GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 304
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IF+ M E+D SWNSI + Q G+ + + R+F M + + T ST+L H+
Sbjct: 305 NYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 364
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVF-MNNALMDMYTKCGSMRDAQMVFTKMSKK 408
GR IHG +V G D V + N L+ MY G +A +VF +M K
Sbjct: 365 DHQKWGRGIHGLVVKMGF---------DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 415
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
D+ SWN ++ + DG+ +AL + M + + VTF L+AC F +GR
Sbjct: 416 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILH 475
Query: 469 PLMESRYGVVPTIEHYTCVI-----DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
L VV + Y +I M G+ G+++E+ + L MP + V W L+
Sbjct: 476 GL------VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRR-DVVAWNALIGGY 528
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ D A +AA + ++E G NY+ + ++ A
Sbjct: 529 AEDEDPDKA-LAAFQTMRVE-GVSSNYITVVSVLSA 562
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 253/517 (48%), Gaps = 47/517 (9%)
Query: 30 FTLATCIASLQLCAHQTNL-QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
F +A+ + + C ++ ++G ++H ++ ++G++ T+++++Y + +
Sbjct: 174 FVIASLVTA---CGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 230
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + NV ++ +++ G+ + +D + LG
Sbjct: 231 VFEEMP-DRNVVSWTSLMVGYSDKGEPEEVIDIYKD-ESLG------------------- 269
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++I G V K GL+ + + ++L++ ++ A +F+++ RD + WN++
Sbjct: 270 -----RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++ +F M + ++ TV+ +LS L + K GR +HG+VVKMG+DS
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 384
Query: 269 GVPVMNALIDMY-GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V V N L+ MY G G+ V EA +F+ M KD+ SWNS+M G L L M
Sbjct: 385 VVCVCNTLLRMYAGAGRSV-EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+S+G + VTF++ L AC GR +HG +VV+GL N + NAL+
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ--------IIGNALVS 495
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G M +++ V +M ++DV +WN +I GY D +AL F M + + +T
Sbjct: 496 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 555
Query: 448 FVGVLSACSHSG-FLSQGREFLPLMESRYGVVPTIEHY-TCVIDMLGRAGQLNEAYELAL 505
V VLSAC G L +G+ + S + EH +I M + G L+ + +L
Sbjct: 556 VVSVLSACLLPGDLLERGKPLHAYIVS--AGFESDEHVKNSLITMYAKCGDLSSSQDLFN 613
Query: 506 AMPNEANPVVWRTLLAASRLHGNTD--LAEIAAQRVF 540
+ N N + W +LAA+ HG+ + L ++ R F
Sbjct: 614 GLDNR-NIITWNAMLAANAHHGHGEEVLKLVSKMRSF 649
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 304/569 (53%), Gaps = 44/569 (7%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
++ +A V + PN + M+ GF L F + + + D T +
Sbjct: 80 RLAHAAAVLAQCAEGPNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAV 139
Query: 142 KCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
K + E IH + FK G + V +G+ALV+ Y + +A K+F+E+ RDV
Sbjct: 140 KAATTSSSPAEA--IHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDV 197
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
V W +V+GYA+ G +A VF RM G W + T+ SA +G GR+VH
Sbjct: 198 VSWTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQ 257
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
VV+ G V + NAL+DM+GK CV A EIF+ M KD++SW S+++ + +CG+ +
Sbjct: 258 CVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLEN 317
Query: 320 T-------------------------------LRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+R+F+ M++AG +P T +VL AC+
Sbjct: 318 AGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQ 377
Query: 349 LAALMHGRQIH-GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L L GR ++ YIV + + V ++NA +DM+ KCG + A +F M
Sbjct: 378 LGCLDVGRCLYDAYIVSHKVELT--------VNLSNAFIDMFAKCGDVGAASRLFRNMED 429
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+V SWN MI+ + + GQ +EAL +F + PDE+T++GVLSACSHSG +S+GR
Sbjct: 430 KNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYH 489
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M+ YG+ P EHY C+ID+LG+ G L EA+E+A +MP A+ W LL A R+HG
Sbjct: 490 FKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHG 549
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N ++ + AA ++ L+P G YVLMS IY + K+ +V IR MR + V+KNPGCS I
Sbjct: 550 NVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCSSI 609
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSL 616
E+ H F+++D SH ++ IYA L ++
Sbjct: 610 EVDGKFHEFLAADVSHAHSEDIYAALENI 638
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 142/323 (43%), Gaps = 27/323 (8%)
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
S TS+++ Y+KC ++ A +F + N +++ M++ + + + + FN M
Sbjct: 301 SWTSMVSAYAKCGDLENAGKLFKEIP-NRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAA 359
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKK--IHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
GV P T ++ C + L+V + + ++L V + +A ++ + KC +
Sbjct: 360 GVEPIDATLVSVLSACAQ-LGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVG 418
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A ++F + ++VV WN M+ +A G+ +AL +F++ GI+ T GVLSA
Sbjct: 419 AASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACS 478
Query: 247 MMGFFKNGR-------VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-E 298
G GR +V+GI + + + +ID+ GK + EA E+ M
Sbjct: 479 HSGLVSEGRYHFKEMKIVYGIEPRAEHYA------CMIDLLGKVGLLEEAFEVARSMPVG 532
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD----LVTFSTVLPACSHLAALMH 354
D W +++ GN + D+++ G P V S + + S +
Sbjct: 533 ADEAGWGALLNACRMHGNVEIGKCAADKLV--GLDPSDSGIYVLMSQIYASKSKWGQV-- 588
Query: 355 GRQIHGYIVVNGLAKNGSCKDID 377
+ I + G+ KN C I+
Sbjct: 589 -KMIRTVMRDRGVKKNPGCSSIE 610
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 292/524 (55%), Gaps = 10/524 (1%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++N + + + + M + G PD ++FP ++K C + + +++H V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV--VLWNAMVNGYAQIGEFHK 218
+ G + + ++ +AL++ Y KC +E+A KVFEE P V +NA+++GY +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A +FRRM + G+ + T+ G++ + + GR +HG VK G S V V+N+ I
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K V +F+ M K + +WN++++ + Q G L LF++M S+G PD T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL +C+HL A G+++ + NG A N VF++NAL+ MY +CG++ A
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPN--------VFLSNALISMYARCGNLAKA 308
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF M K + SW MI YGM G G+ L +F M + ++PD FV VLSACSHS
Sbjct: 309 RAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHS 368
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G +G E M+ Y + P EHY+C++D+LGRAG+L+EA E +MP E + VW
Sbjct: 369 GLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGA 428
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A ++H N D+AE+A +V + EP + G YVLMSNIY E + IR MR++
Sbjct: 429 LLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAF 488
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
RK PG S++E K +H F++ DRSH + + ++ L L + E
Sbjct: 489 RKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVME 532
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 175/332 (52%), Gaps = 10/332 (3%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ S F+ PF L +C ASL L GQ++H +++R G P +T+LI+MY
Sbjct: 44 SGSSPDAFSFPFILKSC-ASLSLPV------SGQQLHCHVIRGGCEAEPFVLTALISMYC 96
Query: 79 KCCQMKYALFVF--NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
KC ++ A VF N S + V YNA+ISG+ +N F M++ GV D T
Sbjct: 97 KCGLVEDARKVFEENPHSSQLGV-CYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVT 155
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
L+ C + + +HG K G +V + ++ + Y+KC +E ++F+E+P
Sbjct: 156 ILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMP 215
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
++ ++ WNA+++GY+Q G + LE+F +M G+ FT+ VLS+ +G K G+
Sbjct: 216 VKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQE 275
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
V +V G+ V + NALI MY + + +A +F++M K + SW +++ + G
Sbjct: 276 VGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 335
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+ L LFD M+ G +PD F VL ACSH
Sbjct: 336 GETGLTLFDDMIKRGIRPDGAVFVMVLSACSH 367
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + LC L G+ +H ++ G + S I MY KC ++ +F+ +
Sbjct: 155 TILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEM 214
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T+NA+ISG+ N A+ L+ F M+ GV PD +T ++ C + A
Sbjct: 215 PVK-GLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 273
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++ LV G +V++ +AL++ Y +C + +A VF+ +P++ +V W AM+ Y
Sbjct: 274 QEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 333
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G L +F M K GI VLSA G G + + + + G
Sbjct: 334 GMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 393
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ L+D+ G+ + EA+E + M E D W +++ + N D F +++
Sbjct: 394 YSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 451
Query: 332 FQP 334
F+P
Sbjct: 452 FEP 454
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 320/590 (54%), Gaps = 18/590 (3%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK--CCQMKYALFV 89
+AT + L +CA + + G+ +H + ++ + + +L++MYSK C +F
Sbjct: 276 VATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFK 335
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIKCCCDV 147
NN NV ++N M+ GF + D M V D+ T + C D
Sbjct: 336 LNN---NKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDE 392
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +K++H K D + +A V +Y KC + A +VF + + + WNA++
Sbjct: 393 SVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALI 452
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GYAQ + +L+ +M G+ FTV +LSA + + G+ VHG +++ +
Sbjct: 453 GGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 512
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V +++ +Y + +F+ ME+ + SWN+++T H Q G + L LF +M
Sbjct: 513 RDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQM 572
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ G QP ++ TV ACS L +L GR+ H Y + + L D+ F+ +++D
Sbjct: 573 VLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLE--------DNAFIACSIID 624
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G++ + VF + +K ASWN MI+GYGM G+ KEA+ +F M PD++T
Sbjct: 625 MYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLT 684
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+GVL+AC+HSG L +G +L M+S +G+ P ++HY CVIDMLGRAGQL+ A +A M
Sbjct: 685 FLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEM 744
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E + +W +LL+ R+H N ++ E A ++F LEP NYVL+SN+Y GK+++V
Sbjct: 745 SEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVR 804
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR---SHPEAKSIYAELH 614
+R M++ ++RK+ GCSWIEL + +F+ +R E KS+++ L
Sbjct: 805 QVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILE 854
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 217/433 (50%), Gaps = 27/433 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ + +++ G++IH + T + + T +I MY+ C + F+ L +
Sbjct: 91 LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK- 149
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA+IS + N+ + L+ F M + +LPD +TFPC+IK C + V +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGLV K GL D+++G+ALV+ Y F+ +ALK+F+ +P R++V WN+M+ ++ G+
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD- 268
Query: 217 HKALEVFRRMSKEGIWMSRF-TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+G +M TV VL G+ VHG VK+ D + V NA
Sbjct: 269 ------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML--SAGFQ 333
L+DMY K C+ ++ IF++ K++ SWN+++ G+ GT L +ML S +
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D VT +P C + L +++H Y + + D + NA + Y KCG
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEF--------VYDELLANAFVASYAKCG 428
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
S+ AQ VF + K + SWN +I GY + +LD M + L PD T +LS
Sbjct: 429 SLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLS 488
Query: 454 ACSHSGFLSQGRE 466
ACS L G+E
Sbjct: 489 ACSKLKSLRLGKE 501
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 185/585 (31%), Positives = 324/585 (55%), Gaps = 11/585 (1%)
Query: 40 QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV 99
+ CA ++L Q IH++++++ T++++MY KC ++ A +F+ + N+
Sbjct: 60 KACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR-NI 118
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
++NAMI GF + + F MR +G PD T L + ++ +K +H +
Sbjct: 119 ASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAI 178
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL--PLRDVVLWNAMVNGYAQIGEFH 217
+ GLD D + + + Y KC ++ A VF + R V WN+++ YA G++
Sbjct: 179 GIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYV 238
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A++ ++ + +G T+ +LS+ G ++HG ++G DS + ++N LI
Sbjct: 239 DAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLI 298
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + + A +F+ M + SW ++++ + + G D L LF+ M G +PD+V
Sbjct: 299 SMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIV 358
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +++ C AL G I Y ++ L K DV + NAL+DMY KCGS+ D
Sbjct: 359 TVLSLISGCGKTGALGLGHWIDNYASLHELKK--------DVVVCNALIDMYAKCGSLND 410
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ +F + + V SW MI ++G+ +EALD+FS + E+ ++P+ +TF+ VL AC H
Sbjct: 411 AREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCH 470
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G+L +GRE +M RYG+ P ++HY+C+ID+LGR G+L EA E+ MP + + +W
Sbjct: 471 GGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWG 530
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LL A ++H N ++ E ++ +F+L+P ++V M+NIY + G+++EV +R TMR
Sbjct: 531 ALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQ 590
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+RK+PG S +++ H F DRSH ++ IY L +L ++++
Sbjct: 591 MRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEALGNLAMQMKQ 635
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 221/431 (51%), Gaps = 18/431 (4%)
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N+ I G + A K L F+ ++ G+ P+ +TFP L K C + + + IH V
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K D+Y+ +A+V+ Y+KC +++A +F+++P+R++ WNAM+ G++QIG +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F M G TV G+ A+I + + VH I ++ G D+ V N I Y
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 282 KGKCVGEALEIFEMMEE--KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
K + A +F +++ + SWNS++ + G + ++ + +L GF+PD T
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++L +C AL++G IHG+ G C D+ + N L+ MY++CG + A
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLG------CD--SDISLINTLISMYSRCGDISSAT 311
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
++F MS + SW MI GY G+ +AL +F+ M E KPD VT + ++S C +G
Sbjct: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTG 371
Query: 460 FLSQGR---EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L G + L E + VV +IDM + G LN+A E+ ++PN V W
Sbjct: 372 ALGLGHWIDNYASLHELKKDVVVC----NALIDMYAKCGSLNDAREIFYSLPNR-TVVSW 426
Query: 517 RTLLAASRLHG 527
++AA L+G
Sbjct: 427 TAMIAACALNG 437
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 3/327 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFN 91
AT I + +L+ + +H+ + TG+ D+ S++ + I YSKC +++ A VF+
Sbjct: 154 ATVIGLTRAVISAKSLRFLKAVHAIGIETGL-DADTSVSNTWIAAYSKCGELQLAKMVFH 212
Query: 92 NLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + ++N++I+ + + + + G PD T L+ C A+
Sbjct: 213 GIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEAL 272
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IHG F+LG D D+ + + L++ Y +C + A +F+ + +R V W AM++GY
Sbjct: 273 IYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGY 332
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+++G AL +F M + G TV ++S G G + V
Sbjct: 333 SEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDV 392
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NALIDMY K + +A EIF + + + SW +++ G L LF + +
Sbjct: 393 VVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSES 452
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQ 357
G +P+ +TF VL AC H L GR+
Sbjct: 453 GIEPNNITFLAVLQACCHGGYLEKGRE 479
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS-ITSLINMYSKCCQMKYALFVFN 91
+T I+ L C L G IH + + G DS +S I +LI+MYS+C + A +F+
Sbjct: 257 STIISLLSSCQQPEALIYGFLIHGHGFQLGC-DSDISLINTLISMYSRCGDISSATILFD 315
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+S V ++ AMISG+ L FN M + G PD T LI C A+
Sbjct: 316 GMSIRTCV-SWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALG 374
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
I L DV + +AL++ Y KC + +A ++F LP R VV W AM+ A
Sbjct: 375 LGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACA 434
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGV 270
GEF +AL++F +S+ GI + T VL A G+ + GR ++ + G + G+
Sbjct: 435 LNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGL 494
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIM 308
+ +ID+ G+ + EALE+ + M K D W +++
Sbjct: 495 DHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALL 533
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 345/645 (53%), Gaps = 45/645 (6%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
N L + + L C + +L +G+++H++ + G + + + L+ YS + A
Sbjct: 36 NRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADA 95
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+ N S N +N +IS + +N + L + M GV PD +T+P ++K C +
Sbjct: 96 HTITVN-SDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGE 154
Query: 147 VMAVLEVKKIH-GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
+ + +++H + G ++Y+ ++LV+ Y K ++ A ++F ++P RD V WN
Sbjct: 155 KLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNG 214
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT-------------VTGVLSALIMM---- 248
+++ YA G + +A E+F M G ++ T G L L M
Sbjct: 215 IISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCD 274
Query: 249 ------------------GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
G K G V+H ++ +D V NALI MY + K + A
Sbjct: 275 IDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHAD 334
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F+ ++ K + +WNS+++ + + LF ML +G +P+ VT +++LP C+ +A
Sbjct: 335 ILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVA 394
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G++ H YI + + G D + + N+L++MY + G + A+ VF + ++D
Sbjct: 395 NLQQGKEFHCYI----MRREGF---EDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDK 447
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
++ +I GYG+ G+GK AL +F M + ++KPD+VT V VLSACSHSG +++G
Sbjct: 448 VTYTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEK 507
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M + YG+VP +EH++C++D+ GRAG LN+A ++ +MP +W TL+ A R+HGNT+
Sbjct: 508 MSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTE 567
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
+ E AA+++ +++P + G YVL++N++ A G++ ++ ++R MR VRK PGC+W+++
Sbjct: 568 IGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVG 627
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
G F+ D S + +Y L LT +++ G AG F S+
Sbjct: 628 SGFSPFVVGDTSKHNSNDLYELLEGLTDLMKDAG-YVAGENFSSE 671
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 11/266 (4%)
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM----MGFFKNGRVVHGIVVKMGY 266
A+ G KA E F + +R + +S+L+ + G+ +H + +G+
Sbjct: 13 ARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGF 72
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
++ + ++ L+ Y + +A I + + WN +++ + G H L +
Sbjct: 73 ENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYRE 132
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M+ G +PD T+ +VL AC L GR++H I N + +++++N+L+
Sbjct: 133 MVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESI-------NAAYGHRWNLYVHNSLV 185
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
MY K G + A+ +F +M ++D SWN +I Y G KEA ++F M A + + +
Sbjct: 186 SMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNII 245
Query: 447 TFVGVLSACSHSGFLSQGREFLPLME 472
T+ + C + E L M
Sbjct: 246 TWNTIAGGCVQTRNFKGALELLSQMR 271
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 39/255 (15%)
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ N+L D+ KG + +A E F S++ +H N D L
Sbjct: 5 LFNSLKDLARKGHLL-KAFETF------------SLIKLHASSANRDAILH--------- 42
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ S++L +C++L +L G+Q+H + + G + + + L+ Y+
Sbjct: 43 ------SISSLLYSCTNLKSLPQGKQLHAHTISLGFE--------NHLVLVPKLVTFYSS 88
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
+ DA + + WN++I Y +G EAL + M ++PD T+ V
Sbjct: 89 FSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSV 148
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC L GRE + + YG + + ++ M G+ G+L+ A L MP E
Sbjct: 149 LKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMP-ER 207
Query: 512 NPVVWRTLLA--ASR 524
+ V W +++ ASR
Sbjct: 208 DAVSWNGIISNYASR 222
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 187/586 (31%), Positives = 328/586 (55%), Gaps = 48/586 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L A L+ Q + ML+ I S +L++ Y+K ++ F+ + +
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKRDI----FSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +YN I+GF N + L+ F M++ G P +YT ++ + + K+IHG
Sbjct: 121 V-SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHG 179
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +V+I +AL + Y KC +E+A +F+ L +++V WN M++GYA+ G+ K
Sbjct: 180 SIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEK 239
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ + +M G + T++ +++A + + GRV
Sbjct: 240 CIGLLHQMRLSGHMPDQVTMSTIIAA-----YCQCGRV---------------------- 272
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
EA +F +EKDI W ++M + + G + L LF+ ML +PD T
Sbjct: 273 --------DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYT 324
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S+V+ +C+ LA+L HG+ +HG ++ GL N + +++AL+DMY+KCG + DA
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNN--------LLVSSALIDMYSKCGFIDDA 376
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF M ++V SWN MI+G +G K+AL++F M + K KPD VTF+G+LSAC H
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
++ QG+E+ + +++G+ PT++HY C++++LGR G++ +A L M ++ + ++W T
Sbjct: 437 NWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+ G+ AE+AA+ +F+L+P Y+++SN+Y + G++++V +R+ M+ +NV
Sbjct: 497 LLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNV 556
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K G SWIE+ + +H F S DR+HPE++ IY +L+ L +L+E G
Sbjct: 557 KKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEG 602
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 164/327 (50%), Gaps = 36/327 (11%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++ L A ++L+ G++IH ++ + + +L +MY+KC +++ A ++F
Sbjct: 154 TEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF 213
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L+ + N+ ++N MISG+ N K + + MR G +PD+ T
Sbjct: 214 DCLT-KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------------- 259
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
S ++ Y +C ++EA +VF E +D+V W AM+ GY
Sbjct: 260 ----------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+ G AL +F M E I +T++ V+S+ + +G+ VHG + G ++ +
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +ALIDMY K + +A +F +M +++ SWN+++ Q G+ L LF+ ML
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQ 357
F+PD VTF +L AC H + G++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQE 444
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 39/224 (17%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-------------- 319
N L+ +Y K + +A +F+ M ++DIFSWN++++ + + G+
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 320 -----------------TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+L LF RM GF+P T ++L A + L+ L +G+QIHG I
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI 181
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+V N VF+ NAL DMY KCG + A+ +F ++KK++ SWN+MI GY
Sbjct: 182 IVRNFLGN--------VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+GQ ++ + + M + PD+VT +++A G + + R
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARR 277
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 38/235 (16%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ------------ 425
D F++N L+ +Y K G +RDAQ +F KM K+D+ SWN ++ Y G
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 426 -------------------GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+E+L++F M +P E T V +L+A + L G++
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ R + + + + DM + G++ +A L + + N V W +++ +
Sbjct: 177 IHGSIIVR-NFLGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKN 234
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNI---YVAGGKYEEVLDIRHTMRQQNV 578
G + I +L GH + V MS I Y G+ +E + +++++
Sbjct: 235 GQPEKC-IGLLHQMRLS-GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 328/586 (55%), Gaps = 48/586 (8%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L A L+ Q + ML+ S +L++ Y+K ++ F+ + +
Sbjct: 65 LHLYAKFGKLRDAQNLFDKMLKR----DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +YN I+GF N + L+ F M++ G P +YT ++ ++ + K+IHG
Sbjct: 121 V-SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHG 179
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +V+I +AL + Y KC +E+A +F+ L +++V WN M++GYA+ G+ K
Sbjct: 180 SIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEK 239
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ + +M G + T++ +++A + + GRV
Sbjct: 240 CIGLLHQMRLSGHMPDQVTMSTIIAA-----YCQCGRV---------------------- 272
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
EA +F +EKDI W ++M + + G + L LF+ ML +PD T
Sbjct: 273 --------DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYT 324
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S+V+ +C+ LA+L HG+ +HG ++ GL N + +++AL+DMY+KCG + DA
Sbjct: 325 LSSVVSSCAKLASLHHGQAVHGKSILAGLNNN--------LLVSSALIDMYSKCGFIDDA 376
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF M ++V SWN MI+G +G K+AL++F M + K KPD VTF+G+LSAC H
Sbjct: 377 RSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHC 436
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
++ QG+E+ + +++G+ PT++HY C++++LGR G++ +A L M ++ + ++W T
Sbjct: 437 NWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWST 496
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+ G+ AE+AA+ +F+L+P Y+++SN+Y + G++++V +R+ M+ +NV
Sbjct: 497 LLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNV 556
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K G SWIE+ + +H F S DR+HPE++ IY +L+ L +L+E G
Sbjct: 557 KKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEG 602
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 163/327 (49%), Gaps = 36/327 (11%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++ L A +L+ G++IH ++ + + +L +MY+KC +++ A ++F
Sbjct: 154 TEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLF 213
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L+ + N+ ++N MISG+ N K + + MR G +PD+ T
Sbjct: 214 DCLT-KKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------------- 259
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
S ++ Y +C ++EA +VF E +D+V W AM+ GY
Sbjct: 260 ----------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGY 297
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A+ G AL +F M E I +T++ V+S+ + +G+ VHG + G ++ +
Sbjct: 298 AKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNL 357
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V +ALIDMY K + +A +F +M +++ SWN+++ Q G+ L LF+ ML
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQ 357
F+PD VTF +L AC H + G++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQE 444
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 39/224 (17%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-------------- 319
N L+ +Y K + +A +F+ M ++D FSWN++++ + + G+
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121
Query: 320 -----------------TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+L LF RM GF+P T ++L A + L L +G+QIHG I
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSI 181
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+V N VF+ NAL DMY KCG + A+ +F ++KK++ SWN+MI GY
Sbjct: 182 IVRNFLGN--------VFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAK 233
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+GQ ++ + + M + PD+VT +++A G + + R
Sbjct: 234 NGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARR 277
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 38/235 (16%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ------------ 425
D F++N L+ +Y K G +RDAQ +F KM K+D SWN ++ Y G
Sbjct: 57 DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116
Query: 426 -------------------GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+E+L++F M +P E T V +L+A + L G++
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ R + + + + DM + G++ +A L + + N V W +++ +
Sbjct: 177 IHGSIIVR-NFLGNVFIWNALTDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKN 234
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNI---YVAGGKYEEVLDIRHTMRQQNV 578
G + I +L GH + V MS I Y G+ +E + +++++
Sbjct: 235 GQPEKC-IGLLHQMRLS-GHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDI 287
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 317/588 (53%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + + G+E+H+++LR G + + +L+ MY+KC + A VF++++ +
Sbjct: 196 LRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVM-D 254
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F M V P+ T + + V K++HG
Sbjct: 255 CISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHG 314
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K G DV ++L+ Y M +A VF + RD + W AM++GY + G K
Sbjct: 315 LAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDK 374
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + T+ L+A +G G +H + G+ S + V NA+++
Sbjct: 375 ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILE 434
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLSAGFQPDL 336
MY K K + +A+E+F+ M EKD+ SW+S++ C NH L F ML A +P+
Sbjct: 435 MYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGF--CFNHRNFEALYYFRHML-ADVKPNS 491
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF L AC+ AL G++IH +++ G+ G ++ NAL+D+Y KCG
Sbjct: 492 VTFIAALAACAATGALRSGKEIHAHVLRCGIEYEG--------YLPNALIDLYVKCGQTG 543
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A F KDV SWNIMI G+ G G AL F+ M + PDEVTFV +L ACS
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACS 603
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G +S+G E M +Y +VP ++HY C++D+L RAGQL EAY MP + VW
Sbjct: 604 RGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVW 663
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL R+H + +L E+AA+ V LEP G +VL+ ++Y ++++ +R TMR++
Sbjct: 664 GALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREK 723
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ + GCSW+E+K +H F++ D SHP+ + I L + R++ G
Sbjct: 724 GLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 771
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 153/542 (28%), Positives = 266/542 (49%), Gaps = 32/542 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYM-LRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ CAH + H++ LR G ++++M + + +A VF + E
Sbjct: 108 LRACAH------ADDRHAWFGLRLG--------NAMLSMLVRFGETWHAWRVFAKMP-ER 152
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+VF++N M+ G+ + + LD ++ M GV PD YTFPC+++ C V +++H
Sbjct: 153 DVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVH 212
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V + G +V + +AL+ Y KC + A KVF+ + + D + WNAM+ G+ + GE +
Sbjct: 213 AHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECN 272
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
LE+F M + + + T+T V A ++ + +HG+ VK G+ V N+LI
Sbjct: 273 AGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLI 332
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + +A +F M+ +D +W ++++ +E+ G D L ++ M PD +
Sbjct: 333 QMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDI 392
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T ++ L AC+ L +L G ++H G I + + NA+++MY K +
Sbjct: 393 TIASALAACACLGSLDVGVKLHELAESKGF--------ISYIVVTNAILEMYAKSKRIDK 444
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A VF M +KDV SW+ MI G+ + + EAL F M A +KP+ VTF+ L+AC+
Sbjct: 445 AIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAA 503
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G L G+E + R G+ +ID+ + GQ A+ A + V W
Sbjct: 504 TGALRSGKEIHAHV-LRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAH-GAKDVVSWN 561
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGKYEEVLDIRHTMR 574
++A HG+ D A ++ ++ G C + V + A GG E ++ H+M
Sbjct: 562 IMIAGFVAHGHGDTALSFFNQMVKI--GECPDEVTFVALLCACSRGGMVSEGWELFHSMT 619
Query: 575 QQ 576
++
Sbjct: 620 EK 621
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 307/571 (53%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H + ++ G+ +L++ Y K + A VF + + + TYNAM+ G
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH-DKDAVTYNAMMMGCSKEG 215
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L F MR+ G+ +TF ++ + +L ++H LV + L+V++ +
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+L++ Y KC +++ ++F+E+P RD V +N ++ YA L +FR M K G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+LS + G+ +H +V +G S + NALIDMY K + A F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
EK SW +++T + Q G H+ L+LF M AG +PD TFS+++ A S LA +
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GRQ+H Y++ +G + VF + L+DMY KCG + +A F +M +++ SW
Sbjct: 456 LGRQLHSYLIRSGYKSS--------VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I Y G+ K A+ MF M PD VTF+ VL+ACSH+G + ++ LM+
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+Y + P EHY CVID LGR G ++ ++ + MP +A+P++W ++L + R+HGN +LA
Sbjct: 568 QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR 627
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+AA ++F +EP YV++SNIY G++E+ ++ MR + VRK G SW+E+K +
Sbjct: 628 VAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKI 687
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++F S+D + P I EL L + + G
Sbjct: 688 YSFASNDLTSPMIDEIKDELDRLYKEMDKQG 718
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 247/519 (47%), Gaps = 35/519 (6%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S+ +++ YS + A +F + S N T+ M+ + L F M
Sbjct: 75 FSLNLILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV+PD+ T ++ + V +H K GLD V++ + L++ Y K +
Sbjct: 134 EGVIPDRVTVTTVLN-----LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VF E+ +D V +NAM+ G ++ G +AL++F M + GI + FT + +L+
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M G VH +V++ V V N+L+D Y K C+ + +F+ M E+D S+N I
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 308 MTVH--EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
+ + QC LRLF M GF ++ ++T+L L + G+QIH +V+
Sbjct: 309 IAAYAWNQCAA--TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA + NAL+DMY+KCG + A+ F+ S+K SW +I GY +GQ
Sbjct: 367 GLASED--------LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 418
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+EAL +FS M A L+PD TF ++ A S + GR+ + R G ++ +
Sbjct: 419 HEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL-IRSGYKSSVFSGS 477
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
++DM + G L+EA MP E N + W +++A +G A+ ++ G
Sbjct: 478 VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYGE-------AKNAIKMFEG 529
Query: 546 --HCG---NYVLMSNIYVA---GGKYEEVLDIRHTMRQQ 576
HCG + V ++ A G +E + H M+ Q
Sbjct: 530 MLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQ 568
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 1/320 (0%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T T + L + A +L G ++H+ +LR+ + + SL++ YSKC +
Sbjct: 233 PATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + NV +YN +I+ + N A L F M++LG + ++ +
Sbjct: 293 LFDEMPERDNV-SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 351
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V K+IH + LGL + +G+AL++ Y KC ++ A F + + W A++
Sbjct: 352 DVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALIT 411
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY Q G+ +AL++F M + G+ R T + ++ A + GR +H +++ GY S
Sbjct: 412 GYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKS 471
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + L+DMY K C+ EAL F+ M E++ SWN++++ + G +++F+ ML
Sbjct: 472 SVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGML 531
Query: 329 SAGFQPDLVTFSTVLPACSH 348
GF PD VTF +VL ACSH
Sbjct: 532 HCGFNPDSVTFLSVLAACSH 551
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 181/428 (42%), Gaps = 64/428 (14%)
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H +F L L L Y S + A +F P R+ W M+ +A G
Sbjct: 71 HKNIFSLNLILSAYSSSG---------DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
AL +FR M EG+ R TVT VL+ + G +H +K G D+ V V N L
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLN---LPGCTVPS--LHPFAIKFGLDTHVFVCNTL 176
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+D Y K + A +F M +KD ++N++M + G H L+LF M AG
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
TFS++L + +A L+ G Q+H ++ + + +VF+NN+L+D Y+KC +
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVLRS--------TSVLNVFVNNSLLDFYSKCDCLD 288
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D + +F +M ++D S+N++I Y + L +F M + + + +LS
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 457 HSGFLSQGREF---LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
+ G++ L L+ G+ +IDM + G L+ A + + +E +
Sbjct: 349 SLPDVHIGKQIHAQLVLL----GLASEDLLGNALIDMYSKCGMLDAA-KSNFSNRSEKSA 403
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ W L+ YV G++EE L + M
Sbjct: 404 ISWTALITG----------------------------------YVQNGQHEEALQLFSDM 429
Query: 574 RQQNVRKN 581
R+ +R +
Sbjct: 430 RRAGLRPD 437
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 5/299 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
++ G++IH+ ++ G+ L +LI+MYSKC + A F+N S E + ++ A+I
Sbjct: 352 DVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALI 410
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+G+ N + L F+ MR+ G+ PD+ TF +IK + + +++H + + G
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
V+ GS LV+ Y KC ++EAL+ F+E+P R+ + WNA+++ YA GE A+++F M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
G T VL+A G + H + + +ID G+ C
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGC 590
Query: 286 VGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ ++ EM + D W SI+ GN + D++ G +P T +L
Sbjct: 591 FSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GMEPTDATPYVIL 647
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 194/586 (33%), Positives = 320/586 (54%), Gaps = 16/586 (2%)
Query: 45 QTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQM-KYALFVFNNLSCEPNVFT- 101
+T+ + ++H+ ++++G + SP SL+ + + YA+ +F L P + T
Sbjct: 26 RTDPRYLPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFR-LGPRPPLSTP 84
Query: 102 -YNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKK-IHG 158
YN ++ L F M + V PD++T C +K C M L+V + I
Sbjct: 85 CYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSR-MCTLDVGRGIQA 143
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K GL D ++ S+L++ Y C+ + A +F+ + VV+WNA++ Y + G + +
Sbjct: 144 YAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWME 203
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+E+F+ M + G+ T+ V++A +G K G+ V V + G +M ALID
Sbjct: 204 VVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALID 263
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K +G+A +F+ M+ +D+ +W+++++ + Q L LF M A +P+ VT
Sbjct: 264 MYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT 323
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+VL AC+ L AL G+ +H YI L+ + + AL+D Y KCG + DA
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRRKRLSLT--------IILGTALVDFYAKCGCIDDA 375
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F M K+ +W +I G +G+G+EAL++FS M +A ++P +VTF+GVL ACSHS
Sbjct: 376 VEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHS 435
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ +GR M YG+ P EHY CV+D+LGRAG ++EAY+ MP E N V+WR
Sbjct: 436 CLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRA 495
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL++ +H N ++ E A +++ L P H G+Y+L+SNIY + G+++ IR M+ + +
Sbjct: 496 LLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGI 555
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PGCS IEL + F + D HP+ K IY ++ + R++ G
Sbjct: 556 EKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAG 601
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 167/324 (51%), Gaps = 1/324 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L+ C+ L G+ I +Y ++ G++ ++SLI+MY+ C + A +F+ +
Sbjct: 121 TVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAV 180
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E V +NA+I+ + N + ++ F M ++GV D+ T ++ C +
Sbjct: 181 E-ENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLG 239
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K + V + GL + + +AL++ Y KC + +A ++F+ + RDVV W+AM++GY Q
Sbjct: 240 KWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQA 299
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +AL +F M + + T+ VLSA ++G + G+ VH + + + +
Sbjct: 300 DQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILG 359
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+D Y K C+ +A+E FE M K+ ++W +++ G L LF M A +
Sbjct: 360 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIE 419
Query: 334 PDLVTFSTVLPACSHLAALMHGRQ 357
P VTF VL ACSH + GR+
Sbjct: 420 PTDVTFIGVLMACSHSCLVEEGRR 443
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 6/290 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T ++ + C + + G+ + Y+ G++ + +T+LI+MY+KC ++ A +
Sbjct: 218 FDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRL 277
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++AMISG+ D + L F+ M+ V P+ T ++ C + A
Sbjct: 278 FDGMQSR-DVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGA 336
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K +H + + L L + +G+ALV+ Y KC +++A++ FE +P+++ W A++ G
Sbjct: 337 LETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG 396
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYDS 268
A G +ALE+F M K I + T GVL A + GR + G
Sbjct: 397 MATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKP 456
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNH 317
++D+ G+ + EA + M E + W ++++ C H
Sbjct: 457 RAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLS---SCAVH 503
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 314/571 (54%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+HS + G + + LI+ YS C + A VFN + + + AM+S + ND
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI-VRKDAVVWTAMVSCYSEND 242
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
F+ MR G P+ + ++K + +V+ K IHG K D + ++G
Sbjct: 243 CPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGG 302
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y KC +++A FE +P DV+L + M++ YAQ + +A E+F R+ + +
Sbjct: 303 ALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP 362
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ ++++ VL A M G+ +H +K+G++S + V NAL+D Y K + +L+IF
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + + SWN+I+ Q G + L +F M +A VT+S+VL AC+ A++
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
H QIH I + +D + N+L+D Y KCG +RDA VF + ++D+ SW
Sbjct: 483 HAGQIHCSIEKSTFN--------NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY + GQ +AL++F M ++ ++ +++TFV +LS CS +G ++ G M
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P++EHYTC++ +LGRAG+LN+A + +P+ + +VWR LL++ +H N L
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A+++ ++EP YVL+SN+Y A G ++V +R +MR VRK PG SW+E+K +
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEI 714
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ + I A L L + G
Sbjct: 715 HAFSVGSVDHPDMRVINAMLEWLNLKTSREG 745
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 238/499 (47%), Gaps = 15/499 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFN 91
C LQ C + + + G+ +H +++R G + L+NMY K + A +F+
Sbjct: 61 ACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFD 120
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E N+ ++ ++ F +R G +++ ++K + A
Sbjct: 121 RMP-ERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+H +KLG D + ++GS L++ Y C + +A VF + +D V+W AMV+ Y+
Sbjct: 180 LAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ A VF +M G + F +T VL A + + G+ +HG +K D+
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMY K + +A FEM+ D+ + +++ + Q ++ LF R++ +
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ + S+VL AC+++ L G+QIH + + G D+F+ NALMD Y K
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHES--------DLFVGNALMDFYAK 411
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C M + +F+ + + SWN +++G+ G G+EAL +F M A++ +VT+ V
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471
Query: 452 LSACSHSGFLSQ-GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L AC+ + + G+ + +S + I + +ID + G + +A ++ + E
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-ME 528
Query: 511 ANPVVWRTLLAASRLHGNT 529
+ + W +++ LHG
Sbjct: 529 RDIISWNAIISGYALHGQA 547
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 12/233 (5%)
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM--NALIDMYGKGKCVGEALEIF 293
F L I G + GR VHG VV+ G + + N L++MYGK + A +F
Sbjct: 60 FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M E+++ S+ +++ H Q G+ + LF R+ G + + +T+L + A
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+H G N F+ + L+D Y+ C + DA+ VF + +KD W
Sbjct: 180 LAGGVHSCAWKLGHDHNA--------FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVW 231
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA--CSHSGFLSQG 464
M+ Y + + A +FS M + KP+ VL A C S L +G
Sbjct: 232 TAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q P T T + L+ CA +++ +IH + ++ + + SLI+ Y+KC +
Sbjct: 457 QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYI 516
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ AL VF +L E ++ ++NA+ISG+ + A L+ F+ M + V + TF L+
Sbjct: 517 RDALKVFQHL-MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSV 575
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA------LVNTYLKCQFMEEALKVFEELP- 196
C V HGL + +D I + +V + + +AL+ ++P
Sbjct: 576 CSSTGLV-----NHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPS 630
Query: 197 LRDVVLWNAMVN 208
++W A+++
Sbjct: 631 APSAMVWRALLS 642
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 307/571 (53%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H + ++ G+ +L++ Y K + A VF + + + TYNAM+ G
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH-DKDAVTYNAMMMGCSKEG 215
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L F MR+ G+ +TF ++ + +L ++H LV + L+V++ +
Sbjct: 216 LHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNN 275
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+L++ Y KC +++ ++F+E+P RD V +N ++ YA L +FR M K G
Sbjct: 276 SLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 335
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+LS + G+ +H +V +G S + NALIDMY K + A F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
EK SW +++T + Q G H+ L+LF M AG +PD TFS+++ A S LA +
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GRQ+H Y++ +G + VF + L+DMY KCG + +A F +M +++ SW
Sbjct: 456 LGRQLHSYLIRSGYKSS--------VFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISW 507
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I Y G+ K A+ MF M PD VTF+ VL+ACSH+G + ++ LM+
Sbjct: 508 NAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKH 567
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+Y + P EHY CVID LGR G ++ ++ + MP +A+P++W ++L + R+HGN +LA
Sbjct: 568 QYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELAR 627
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+AA ++F +EP YV++SNIY G++E+ ++ MR + VRK G SW+E+K +
Sbjct: 628 VAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKI 687
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++F S+D + P I EL L + + G
Sbjct: 688 YSFASNDLTSPMIDEIKDELDRLYKEMDKQG 718
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 247/519 (47%), Gaps = 35/519 (6%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S+ +++ YS + A +F + S N T+ M+ + L F M
Sbjct: 75 FSLNLILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV+PD+ T ++ + V +H K GLD V++ + L++ Y K +
Sbjct: 134 EGVIPDRVTVTTVLN-----LPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAA 188
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +VF E+ +D V +NAM+ G ++ G +AL++F M + GI + FT + +L+
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M G VH +V++ V V N+L+D Y K C+ + +F+ M E+D S+N I
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 308 MTVH--EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
+ + QC LRLF M GF ++ ++T+L L + G+QIH +V+
Sbjct: 309 IAAYAWNQCAA--TVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL 366
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
GLA + NAL+DMY+KCG + A+ F+ S+K SW +I GY +GQ
Sbjct: 367 GLASED--------LLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQ 418
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+EAL +FS M A L+PD TF ++ A S + GR+ + R G ++ +
Sbjct: 419 HEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYL-IRSGYKSSVFSGS 477
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
++DM + G L+EA MP E N + W +++A +G A+ ++ G
Sbjct: 478 VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYGE-------AKNAIKMFEG 529
Query: 546 --HCG---NYVLMSNIYVA---GGKYEEVLDIRHTMRQQ 576
HCG + V ++ A G +E + H M+ Q
Sbjct: 530 MLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQ 568
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 1/320 (0%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T T + L + A +L G ++H+ +LR+ + + SL++ YSKC +
Sbjct: 233 PATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRR 292
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + NV +YN +I+ + N A L F M++LG + ++ +
Sbjct: 293 LFDEMPERDNV-SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLP 351
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V K+IH + LGL + +G+AL++ Y KC ++ A F + + W A++
Sbjct: 352 DVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALIT 411
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY Q G+ +AL++F M + G+ R T + ++ A + GR +H +++ GY S
Sbjct: 412 GYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKS 471
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + L+DMY K C+ EAL F+ M E++ SWN++++ + G +++F+ ML
Sbjct: 472 SVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGML 531
Query: 329 SAGFQPDLVTFSTVLPACSH 348
GF PD VTF +VL ACSH
Sbjct: 532 HCGFNPDSVTFLSVLAACSH 551
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 180/428 (42%), Gaps = 64/428 (14%)
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H +F L L L Y S + A +F P R+ W M+ +A G
Sbjct: 71 HKNIFSLNLILSAYSSSG---------DLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRT 121
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
AL +FR M EG+ R TVT VL+ + G +H +K G D+ V V N L
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLN---LPGCTVPS--LHPFAIKFGLDTHVFVCNTL 176
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+D Y K + A +F M +KD ++N++M + G H L+LF M AG
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
TFS++L + +A L+ G Q+H ++ + +VF+NN+L+D Y+KC +
Sbjct: 237 FTFSSILTVAAGMAHLLLGHQVHALVL--------RSTSVLNVFVNNSLLDFYSKCDCLD 288
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D + +F +M ++D S+N++I Y + L +F M + + + +LS
Sbjct: 289 DMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAG 348
Query: 457 HSGFLSQGREF---LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
+ G++ L L+ G+ +IDM + G L+ A + + +E +
Sbjct: 349 SLPDVHIGKQIHAQLVLL----GLASEDLLGNALIDMYSKCGMLDAA-KSNFSNRSEKSA 403
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ W L+ YV G++EE L + M
Sbjct: 404 ISWTALITG----------------------------------YVQNGQHEEALQLFSDM 429
Query: 574 RQQNVRKN 581
R+ +R +
Sbjct: 430 RRAGLRPD 437
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 5/307 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L + ++ G++IH+ ++ G+ L +LI+MYSKC + A F+N S E +
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS-EKS 402
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ A+I+G+ N + L F+ MR+ G+ PD+ TF +IK + + +++H
Sbjct: 403 AISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHS 462
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G V+ GS LV+ Y KC ++EAL+ F+E+P R+ + WNA+++ YA GE
Sbjct: 463 YLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKN 522
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-GRVVHGIVVKMGYDSGVPVMNALI 277
A+++F M G T VL+A G + H + + +I
Sbjct: 523 AIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVI 582
Query: 278 DMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
D G+ C + ++ EM + D W SI+ GN + D++ G +P
Sbjct: 583 DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF--GMEPTD 640
Query: 337 VTFSTVL 343
T +L
Sbjct: 641 ATPYVIL 647
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 315/582 (54%), Gaps = 21/582 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ NL + +++H+ ++R + + LI+ S C Q A+ VFN + EPN
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ-EPN 81
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V N++I N ++ F+ M++ G+ D +T+P L+K C + VK +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFM--EEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
+ KLGL D+Y+ +AL++ Y +C + +A+K+FE++ RD V WN+M+ G + GE
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A +F M + + + G M F+ + KM + V + +
Sbjct: 202 RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE-------LFEKMPERNTVS-WSTM 253
Query: 277 IDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+ Y K + A +F+ M K++ +W I+ + + G RL D+M+++G +
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D ++L AC+ L G +IH + + L N ++ NAL+DMY KCG+
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNA--------YVLNALLDMYAKCGN 365
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
++ A VF + KKD+ SWN M+ G G+ G GKEA+++FS M ++PD+VTF+ VL +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+H+G + +G ++ ME Y +VP +EHY C++D+LGR G+L EA ++ MP E N V
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W LL A R+H D+A+ + +L+P GNY L+SNIY A +E V DIR M+
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
V K G S +EL+DG+H F D+SHP++ IY L SL
Sbjct: 546 SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F A I+ L C L G IHS + R+ + + + +L++MY+KC +K A V
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN++ + ++ ++N M+ G + + ++ F+ MR+ G+ PDK TF ++ C C+
Sbjct: 373 FNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL-CSCNHAG 430
Query: 150 VLE--------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DV 200
+++ ++K++ LV + V LV+ + ++EA+KV + +P+ +V
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQ------VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSK 228
V+W A++ E A EV + K
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVK 512
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 316/579 (54%), Gaps = 10/579 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL+ G+ IH +++ G+ + +L+ +YS+ + + A VF ++ E ++ ++N+M+
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMM 471
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+ + + GL + Q+G + + TF + C + ++E K +H L+ G
Sbjct: 472 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFH 531
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+ +G+ALV Y K M EA KV + +P D V WNA++ G+A+ E ++A++ ++ +
Sbjct: 532 DFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLI 591
Query: 227 SKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
++GI + T+ VL A K+G +H +V G++S V N+LI MY K
Sbjct: 592 REKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGD 651
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ + IF+ + K +WN+++ + G + L++F M + G D +FS L A
Sbjct: 652 LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 711
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
++LA L G+Q+HG ++ G D+ + NA MDMY KCG M D + +
Sbjct: 712 TANLAVLEEGQQLHGLVIKLGFE--------SDLHVTNAAMDMYGKCGEMHDVLKMLPQP 763
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+ SWNI+I + G ++A + F M + KPD VTFV +LSAC+H G + +G
Sbjct: 764 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 823
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M +GV P IEH C+ID+LGR+G+L+ A MP N + WR+LLAA R+
Sbjct: 824 AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 883
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A+ + +L+P YVL SN+ GK+E+V ++R M N++K P CS
Sbjct: 884 HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 943
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
W++LKD +H+F ++ HP+A I A+L L +E G
Sbjct: 944 WVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAG 982
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 269/533 (50%), Gaps = 24/533 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ G+ +H++ + + +LINMYSK +++A +VF+ + N +++ M
Sbjct: 108 TSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR-HRNEASWSTM 166
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKIHGLVFKLG 164
+SG+ + + F M LGV P+ + LI C + E ++HG V K G
Sbjct: 167 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 226
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ DVY+G+ALV+ Y + A K+FEE+P +VV W +++ GY+ G + L V++
Sbjct: 227 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 286
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM +EG+ ++ T V S+ ++ G V G +++ G++ V V N+LI M+
Sbjct: 287 RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 346
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V EA +F+ M E DI SWN++++ + G +LR F M + + T S++L
Sbjct: 347 SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 406
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
CS + L GR IHG +V GL N V + N L+ +Y++ G DA++VF
Sbjct: 407 VCSSVDNLKWGRGIHGLVVKLGLDSN--------VCICNTLLTLYSEAGRSEDAELVFQA 458
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M+++D+ SWN M+ Y DG+ + L + + + + + VTF L+ACS+ L +
Sbjct: 459 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 518
Query: 465 REFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ L+ +V + V + M G+ G + EA ++ MP + + V W L+
Sbjct: 519 KIVHALI-----IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 572
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ + A + A ++ + E G NY+ M ++ A +++L +H M
Sbjct: 573 GGHAENEEPNEA-VKAYKLIR-EKGIPANYITMVSVLGACSAPDDLL--KHGM 621
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 13/386 (3%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
FP +K ++ + + K +H ++L ++ + L+N Y K +E A VF+E+
Sbjct: 99 FP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR 156
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-GR 255
R+ W+ M++GY ++G + +A+ +F +M G+ + F V +++A G+ + G
Sbjct: 157 HRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGF 216
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VHG VVK G V V AL+ YG V A ++FE M + ++ SW S+M + G
Sbjct: 217 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 276
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
N L ++ RM G + TF+TV +C L + G Q+ G+I+ G
Sbjct: 277 NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE------- 329
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
D V + N+L+ M++ S+ +A VF M++ D+ SWN MI Y G +E+L F
Sbjct: 330 -DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHW 388
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M + + T +LS CS L GR L+ + G+ + ++ + AG
Sbjct: 389 MRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV-VKLGLDSNVCICNTLLTLYSEAG 447
Query: 496 QLNEAYELALAMPNEANPVVWRTLLA 521
+ +A EL E + + W +++A
Sbjct: 448 RSEDA-ELVFQAMTERDLISWNSMMA 472
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 200/566 (35%), Positives = 314/566 (55%), Gaps = 15/566 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H + L + + + CA + Q H + +++ DS +T L++ Y+K ++ A
Sbjct: 131 HDYVLFSIV--FKSCAESRDFQTLTITHCHFVKSLPSDS-FVLTCLVDAYAKFARVDEAT 187
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F+ + +V ++ +MI + ND A +GL FN MR+ V +++T L+ C +
Sbjct: 188 RAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKL 247
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL----RDVVLW 203
+ + K +HG V K G+ ++ Y+ ++L+N Y+KC +++A KVF+E RD+V W
Sbjct: 248 NWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSW 307
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM+ GY+Q G H ALE+F+ GI + TV+ +LS+ +G G+++HG+ VK
Sbjct: 308 TAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVK 367
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G D PV NAL+DMY K V +A +FE M EKD+ SWNSI++ Q G L L
Sbjct: 368 CGLDDH-PVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNL 426
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F RM F PD VT +L AC+ L L G +HG + +GL + +++
Sbjct: 427 FRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLV-------VSSIYVGT 479
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL++ Y KCG R A+MVF M +K+ +W MI GYGM G G +L +F M E ++P
Sbjct: 480 ALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEP 539
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+EV F +L+ACSHSG + +G LM VP+++HY C++DML RAG L EA +
Sbjct: 540 NEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDF 599
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP + + V+ L LH +L A +++ +L P YVL+SN+Y + G++
Sbjct: 600 IERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRW 659
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIEL 589
V +R ++Q+ + K PGCS +E+
Sbjct: 660 GMVKQVREMIKQRGLNKVPGCSSVEM 685
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 242/492 (49%), Gaps = 23/492 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
TNL + +H+ L G+ + L T L+++Y+ Q+++A +FN+L +++ + M
Sbjct: 44 TNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTR-DLYCFKVM 102
Query: 106 ISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYT-FPCLIKCCCDV--MAVLEVKKIHGLVF 161
I ++ ND + + MR L P Y F + K C + L + H F
Sbjct: 103 IRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCH---F 159
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEFHKAL 220
L D ++ + LV+ Y K ++EA + F+E+ DVV W +M+ Y Q + L
Sbjct: 160 VKSLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGL 219
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F RM + + + FTV ++SA + + G+ VHG V+K G + +L++MY
Sbjct: 220 TLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMY 279
Query: 281 GKGKCVGEALEIFEMME----EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
K + +A ++F+ ++D+ SW +++ + Q G L LF +G P+
Sbjct: 280 VKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNS 339
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT S++L +C+ L + G+ +HG V GL DD + NAL+DMY KCG +
Sbjct: 340 VTVSSLLSSCAQLGNSVMGKLLHGLAVKCGL---------DDHPVRNALVDMYAKCGVVS 390
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA+ VF M +KDV SWN +I G+ G+ EAL++F M PD VT VG+LSAC+
Sbjct: 391 DARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACA 450
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G L G L VV +I T +++ + G A + +M E N V W
Sbjct: 451 SLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSM-GEKNAVTW 509
Query: 517 RTLLAASRLHGN 528
++ + G+
Sbjct: 510 GAMIGGYGMQGD 521
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 189/411 (45%), Gaps = 27/411 (6%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
++H Q P TF L + C ++ ++ K +H GL D+ + + L++ Y
Sbjct: 21 LYHHHGQKQQPPSPPTF-YLSRLCTNLPSL---KTLHASFLIHGLTNDLLLSTKLLSLYA 76
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR--RMSKEGIWMSRFTV 238
+ A K+F LP RD+ + M+ Y + ++R R+S
Sbjct: 77 SFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLF 136
Query: 239 TGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMME 297
+ V + F+ + H VK S V+ L+D Y K V EA F E+ E
Sbjct: 137 SIVFKSCAESRDFQTLTITHCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHE 195
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
D+ SW S++ + Q L LF+RM A + T +++ AC+ L L G+
Sbjct: 196 NDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKW 255
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK----KDVASW 413
+HG+++ NG+ N ++ +L++MY KCG+++DA VF + S +D+ SW
Sbjct: 256 VHGFVIKNGICVNS--------YLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSW 307
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI+GY G AL++F + + P+ VT +LS+C+ G G+ L +
Sbjct: 308 TAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGK-LLHGLAV 366
Query: 474 RYGVVPTIEH--YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G+ +H ++DM + G +++A + AM E + V W ++++
Sbjct: 367 KCGL---DDHPVRNALVDMYAKCGVVSDARCVFEAML-EKDVVSWNSIISG 413
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/505 (36%), Positives = 292/505 (57%), Gaps = 10/505 (1%)
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L + M + G P+ +TFP +K C + + + HG + K+G + ++ + L
Sbjct: 22 LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 81
Query: 176 VNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
++ Y K ++ A KVFEE + V +NA+V+GY + A+ +FR+M++EG+ +
Sbjct: 82 ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ T+ G++ A + + G +H +K G+DS V V+N I MY K V A ++F
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M K + SWN++++ + Q G L L+ M G PD VT VL +C++L A
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 261
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G ++ + +G N F+NNAL++MY +CG++ AQ VF M ++ + SW
Sbjct: 262 VGHEVEFKMQASGFTSNP--------FLNNALINMYARCGNLTKAQAVFDGMPERTLVSW 313
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+I GYGM G G+ A+ +F M + ++PD FV VLSACSH+G QG E+ +M+
Sbjct: 314 TAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKR 373
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
Y + P EHY+C++D+LGRAG+L EA L +MP + + VW LL A ++H N +LAE
Sbjct: 374 NYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAE 433
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A +RV +LEP + G YVL+SNIY + VL IR M+++ ++K+PGCS++ELK +
Sbjct: 434 LAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRV 493
Query: 594 HTFISSDRSHPEAKSIYAELHSLTA 618
H FI DR+H ++ IY L L A
Sbjct: 494 HPFIVGDRNHLQSDEIYRVLEELEA 518
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 187/400 (46%), Gaps = 26/400 (6%)
Query: 25 TFNHPFTLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
F PF L +C A SL + G + H + + G + P T LI+MY K +
Sbjct: 40 AFTFPFALKSCAALSLPIL--------GSQFHGQITKVGCVFEPFVQTGLISMYCKGSLV 91
Query: 84 KYALFVFN-NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
A VF N YNA++SG+ SN + F M + GV + T LI
Sbjct: 92 DNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIP 151
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + + +H K G D DV + + + Y+KC + A K+F+E+P++ ++
Sbjct: 152 ACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLIS 211
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WNAMV+GYAQ G LE++R M G+ T+ GVLS+ +G G V +
Sbjct: 212 WNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQ 271
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G+ S + NALI+MY + + +A +F+ M E+ + SW +I+ + G+ + ++
Sbjct: 272 ASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQ 331
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG----SCKDIDD 378
LF M+ +G +PD F VL ACSH G + + N + G SC
Sbjct: 332 LFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSC----- 386
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G +++AQ + M K D A W ++
Sbjct: 387 ------MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL 420
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 152/333 (45%), Gaps = 14/333 (4%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN + A+ +F +AL ++ +M + G + FT L + + G HG +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGT 320
K+G V LI MY KG V A ++FE K +N++++ +
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
+ LF +M G + VT ++PAC L G +H + G DV
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFD--------SDVS 179
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ N + MY KCGS+ AQ +F +M K + SWN M+ GY +G L+++ M
Sbjct: 180 VVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNG 239
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ PD VT VGVLS+C++ G S G E + S + P + + +I+M R G L +
Sbjct: 240 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTK 297
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A + MP E V W ++ +HG+ ++A
Sbjct: 298 AQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIA 329
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 314/571 (54%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+HS + G + + LI+ YS C + A VFN + + + AM+S + ND
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI-VRKDAVVWTAMVSCYSEND 242
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
F+ MR G P+ + ++K + +V+ K IHG K D + ++G
Sbjct: 243 CPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGG 302
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL++ Y KC +++A FE +P DV+L + M++ YAQ + +A E+F R+ + +
Sbjct: 303 ALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP 362
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ ++++ VL A M G+ +H +K+G++S + V NAL+D Y K + +L+IF
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + + SWN+I+ Q G + L +F M +A VT+S+VL AC+ A++
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
H QIH I + +D + N+L+D Y KCG +RDA VF + ++D+ SW
Sbjct: 483 HAGQIHCSIEKSTFN--------NDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISW 534
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY + GQ +AL++F M ++ ++ +++TFV +LS CS +G ++ G M
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P++EHYTC++ +LGRAG+LN+A + +P+ + +VWR LL++ +H N L
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A+++ ++EP YVL+SN+Y A G ++V +R +MR VRK PG SW+E+K +
Sbjct: 655 FSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEI 714
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ + I A L L + G
Sbjct: 715 HAFSVGSVDHPDMRVINAMLEWLNLKTSREG 745
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 238/499 (47%), Gaps = 15/499 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFN 91
C LQ C + + + G+ +H +++R G + L+NMY K + A +F+
Sbjct: 61 ACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFD 120
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E N+ ++ ++ F +R G +++ ++K + A
Sbjct: 121 RMP-ERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+H +KLG D + ++GS L++ Y C + +A VF + +D V+W AMV+ Y+
Sbjct: 180 LAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYS 239
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ A VF +M G + F +T VL A + + G+ +HG +K D+
Sbjct: 240 ENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPH 299
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMY K + +A FEM+ D+ + +++ + Q ++ LF R++ +
Sbjct: 300 VGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSS 359
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ + S+VL AC+++ L G+QIH + + G D+F+ NALMD Y K
Sbjct: 360 VLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHES--------DLFVGNALMDFYAK 411
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C M + +F+ + + SWN +++G+ G G+EAL +F M A++ +VT+ V
Sbjct: 412 CNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSV 471
Query: 452 LSACSHSGFLSQ-GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L AC+ + + G+ + +S + I + +ID + G + +A ++ + E
Sbjct: 472 LRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKCGYIRDALKVFQHL-ME 528
Query: 511 ANPVVWRTLLAASRLHGNT 529
+ + W +++ LHG
Sbjct: 529 RDIISWNAIISGYALHGQA 547
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 12/233 (5%)
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM--NALIDMYGKGKCVGEALEIF 293
F L I G + GR VHG VV+ G + + N L++MYGK + A +F
Sbjct: 60 FACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLF 119
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M E+++ S+ +++ H Q G+ + LF R+ G + + +T+L + A
Sbjct: 120 DRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAG 179
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+H G N F+ + L+D Y+ C + DA+ VF + +KD W
Sbjct: 180 LAGGVHSCAWKLGHDHNA--------FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVW 231
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA--CSHSGFLSQG 464
M+ Y + + A +FS M + KP+ VL A C S L +G
Sbjct: 232 TAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q P T T + L+ CA +++ +IH + ++ + + SLI+ Y+KC +
Sbjct: 457 QAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYI 516
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ AL VF +L E ++ ++NA+ISG+ + A L+ F+ M + V + TF L+
Sbjct: 517 RDALKVFQHL-MERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSV 575
Query: 144 C 144
C
Sbjct: 576 C 576
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/622 (30%), Positives = 324/622 (52%), Gaps = 42/622 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L +++H+++LRT I S ++ S + YAL +F+++
Sbjct: 17 TILEKLSFC---KSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSI 73
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S P +N+++ + + F+ +R +G D+ +FP ++K V A+ E
Sbjct: 74 SPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEG 133
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++HG FK+ D ++ + L++ Y C + A VF+E+ RDVV WN M+ Y +
Sbjct: 134 MELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRF 193
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A ++F M + + ++SA G + R ++ +++ ++
Sbjct: 194 GLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLL 253
Query: 274 NALIDMYGKGKCVGEALE-------------------------------IFEMMEEKDIF 302
AL+ MY C+ A+E IF+ E KD+
Sbjct: 254 TALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLV 313
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
W ++++ + + + LR+F+ M +G +PD+VT +V+ AC +L L + +H Y
Sbjct: 314 CWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+NGL S ID NAL++MY KCG + A+ VF KM ++V SW+ MI + M
Sbjct: 374 HLNGLE---SVLPID-----NALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM 425
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G+ ++L +F+ M + ++P+EVTFVGVL CSHSG + +G++ M Y + P IE
Sbjct: 426 HGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIE 485
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+ GRA L EA E+ +MP N V+W +L++A R+HG +L E+AA+R+ +L
Sbjct: 486 HYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKL 545
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP H G VLMSNIY +++ V IR M ++ V K G S I+L H F+ D+
Sbjct: 546 EPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKR 605
Query: 603 HPEAKSIYAELHSLTARLREHG 624
H ++ IY +L+ + ++L+ G
Sbjct: 606 HKQSNEIYTKLYEVVSKLKLAG 627
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/492 (38%), Positives = 284/492 (57%), Gaps = 13/492 (2%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G+ D T+ LIKCC AV E I ++ G +++ + L+N Y+K + +A
Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++F+++P R+V+ W M++ Y++ KALE+ M ++G+ + +T + VL A M
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
+ R++H ++K G +S V V +ALID++ K +AL +F+ M D WNSI+
Sbjct: 128 S---DVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 184
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
Q D L LF RM AGF + T ++VL AC+ LA L G Q H +IV
Sbjct: 185 GGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----- 239
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
K D+ +NNAL+DMY KCGS+ DA+ VF +M ++DV +W+ MI G +G +E
Sbjct: 240 -----KYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQE 294
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +F M + KP+ +T VGVL ACSH+G L G + M+ YG+ P EHY C+I
Sbjct: 295 ALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMI 354
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
D+LG+AG+L++A +L M E + V WRTLL A R+ N LAE AA++V L+P G
Sbjct: 355 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 414
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
Y ++SNIY K++ V +IR MR ++K PGCSWIE+ +H FI D SHP+
Sbjct: 415 TYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVE 474
Query: 609 IYAELHSLTARL 620
+ +L+ L RL
Sbjct: 475 VNKKLNQLIHRL 486
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 196/390 (50%), Gaps = 22/390 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ C + +G I ++ G + LINMY K + A +F+
Sbjct: 14 ATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQ 73
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV ++ MIS + K L+ M + GV P+ YT+ +++ C + +
Sbjct: 74 MP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRAC---NGMSD 129
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V+ +H + K GL+ DVY+ SAL++ + K E+AL VF+E+ D ++WN+++ G+AQ
Sbjct: 130 VRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 189
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
ALE+F+RM + G + T+T VL A + + G H +VK YD + +
Sbjct: 190 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 247
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY K + +A +F M+E+D+ +W+++++ Q G L+LF+ M S+G
Sbjct: 248 NNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGT 307
Query: 333 QPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P+ +T VL ACSH L G R + +N ++ C ++D+
Sbjct: 308 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGC-----------MIDL 356
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
K G + DA + +M + D +W ++
Sbjct: 357 LGKAGKLDDAVKLLNEMECEPDAVTWRTLL 386
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 161/339 (47%), Gaps = 27/339 (7%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
+ G+W T + ++ + G ++ + G+ + ++N LI+MY K
Sbjct: 4 LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ +A ++F+ M ++++ SW ++++ + +C H L L ML G +P++ T+S+VL A
Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ ++ + R +H I+ GL DV++ +AL+D++ K G DA VF +M
Sbjct: 124 CNGMSDV---RMLHCGIIKEGLE--------SDVYVRSALIDVFAKLGEPEDALSVFDEM 172
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
D WN +I G+ + + AL++F M A ++ T VL AC+ L G
Sbjct: 173 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG- 231
Query: 466 EFLPLMESRYGVVPTIEHY---TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
M++ +V + ++DM + G L +A + M E + + W T+++
Sbjct: 232 -----MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQM-KERDVITWSTMISG 285
Query: 523 SRLHGNTDLAEIAAQRVFQL--EPGHCGNYVLMSNIYVA 559
+G + A ++F+L G NY+ + + A
Sbjct: 286 LAQNGYSQ----EALKLFELMKSSGTKPNYITIVGVLFA 320
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
D + S G D T+S ++ C A+ G I ++ NG +F+ N
Sbjct: 1 MDSLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPM--------MFLVN 52
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L++MY K + DA +F +M +++V SW MI Y ++AL++ M ++P
Sbjct: 53 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRP 112
Query: 444 DEVTFVGVLSACS--------HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
+ T+ VL AC+ H G + +G E + + +ID+ + G
Sbjct: 113 NVYTYSSVLRACNGMSDVRMLHCGIIKEGLE------------SDVYVRSALIDVFAKLG 160
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ +A + M + +VW +++ + +D+A
Sbjct: 161 EPEDALSVFDEMVT-GDAIVWNSIIGGFAQNSRSDVA 196
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 323/605 (53%), Gaps = 58/605 (9%)
Query: 29 PFTLATCI-ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ---MK 84
P T +C+ SL+ C L + +++H + + G+ P ++T L+N ++ +
Sbjct: 21 PMTKDSCLNESLRCC---KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLD 77
Query: 85 YALFVFN----NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
YA F ++ + +F N++I G+ S + + + M LGV P+ YTFP +
Sbjct: 78 YARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFV 137
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ C + A E ++HG V K+GL+ DV+I + L++ Y +C M+ KVFE + R+V
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNV 197
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V W +++ GYA+ +A+ +F M +
Sbjct: 198 VSWTSLICGYARGDRPKEAVSLFFEMLNK------------------------------- 226
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++NAL+DMY K + A +F+ ++++ +N+I++ + + G
Sbjct: 227 ----------VMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 276
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG-SCKDIDDV 379
L + D ML G +PD VT + + A + L L +G+ HGY V + KNG C D+
Sbjct: 277 LAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPC----DM 332
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+N AL+DM+ +CG + A VF KM+++DV++W I M+G G+ A +F+ M
Sbjct: 333 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 392
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+KPD V FV VL+ACSH G + QG LME +G+ P IEHY C++D+LGRAG L E
Sbjct: 393 GVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLRE 451
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A++L +MP E N VVW +LLAA R+H N ++A AA+R+ +L P G +VL+SNIY +
Sbjct: 452 AFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYAS 511
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
GK+ +V +R +R++ VRK PG S +++ +H F S D SHPE I L + R
Sbjct: 512 AGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCR 571
Query: 620 LREHG 624
+ G
Sbjct: 572 FSDAG 576
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 328/603 (54%), Gaps = 18/603 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A+LQ + ++ G IH L++ +LI MY+KC +M+ A VF ++
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASM 309
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
C V ++N ++SG N+ L++F M+ PD+ + LI +L
Sbjct: 310 LCRDYV-SWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNG 368
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++H + GLD ++ IG+ L++ Y KC ++ FE + +D++ W ++ GYAQ
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQN 428
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+A+ +FR++ +G+ + + VL A + R +HG V K + + +
Sbjct: 429 ECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQ 487
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG----TLRLFDRMLS 329
NA++++YG+ A FE + KDI SW S++T C H+G L LF +
Sbjct: 488 NAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMIT----CCVHNGLPVEALELFYSLKQ 543
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
QPD + + L A ++L++L G++IHG+++ G G + ++L+DMY
Sbjct: 544 TNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP--------IASSLVDMY 595
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
CG++ +++ +F + ++D+ W MI GM G G EA+ +F M + + PD +TF+
Sbjct: 596 ACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFL 655
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L ACSHSG + +G+ F +M+ Y + P EHY C++D+L R+ L EAY+ +MP
Sbjct: 656 ALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPI 715
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + VW LL A +H N +L E+AA+ + Q + + G Y L+SNI+ A G++ +V ++
Sbjct: 716 KPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEV 775
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAG 629
R M+ ++KNPGCSWIE+ + +HTF++ D+SHP+ IY +L T L + G A
Sbjct: 776 RLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQ 835
Query: 630 TLF 632
T F
Sbjct: 836 TKF 838
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 255/537 (47%), Gaps = 19/537 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP- 97
L+ C + G EIH ++ G + +LI MY KC + A +F+ + E
Sbjct: 152 LKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKE 211
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++N++IS + + L F M+++GV + YTF ++ D V IH
Sbjct: 212 DTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIH 271
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G K DVY+ +AL+ Y KC ME+A +VF + RD V WN +++G Q +
Sbjct: 272 GAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYR 331
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL FR M + +V +++A G NG+ VH ++ G DS + + N LI
Sbjct: 332 DALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLI 391
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K CV FE M EKD+ SW +I+ + Q H + LF ++ G D +
Sbjct: 392 DMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPM 451
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+VL ACS L + R+IHGY+ +D+ D+ + NA++++Y + G
Sbjct: 452 MIGSVLRACSGLKSRNFIREIHGYVFK---------RDLADIMLQNAIVNVYGEVGHRDY 502
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ F + KD+ SW MI +G EAL++F + + ++PD + + LSA ++
Sbjct: 503 ARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATAN 562
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +G+E + R G + ++DM G + + ++ ++ + + ++W
Sbjct: 563 LSSLKKGKEIHGFL-IRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSV-KQRDLILWT 620
Query: 518 TLLAASRLH--GNTDLAEIAAQRVFQLEPGHCGNYVLM-----SNIYVAGGKYEEVL 567
+++ A+ +H GN +A + P H L+ S + V G ++ E++
Sbjct: 621 SMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIM 677
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 218/420 (51%), Gaps = 13/420 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L LC L +GQ++H+ +L++ + S T L++MY KC +K A+ VF+ ++ E
Sbjct: 53 LDLCVAVKALPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEMT-ERT 109
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+FT+NAM+ F S+ + ++ + MR LGV D TFP ++K C + +IHG
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEF 216
+ K G V++ +AL+ Y KC + A +F+ + + D V WN++++ + G+
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL +FRRM + G+ + +T L + F K G +HG +K + + V V NAL
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANAL 289
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I MY K + +A +F M +D SWN++++ Q + L F M ++ +PD
Sbjct: 290 IAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQ 349
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
V+ ++ A L++G+++H Y + NGL N + + N L+DMY KC ++
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSN--------MQIGNTLIDMYAKCCCVK 401
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
F M +KD+ SW +I GY + EA+++F + + D + VL ACS
Sbjct: 402 HMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 199/388 (51%), Gaps = 20/388 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+ C V A+ + +++H + K L ++ + L++ Y KC +++A+KVF+E+ R
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERT 109
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+ WNAM+ + G++ +A+E+++ M G+ + T VL A +G + G +HG
Sbjct: 110 IFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHG 169
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNH 317
+ VK G+ V V NALI MYGK +G A +F+ MME++D SWNSI++ H G
Sbjct: 170 VAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKC 229
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
L LF RM G + TF L + + G IHG L N
Sbjct: 230 LEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHG----AALKSN----HFA 281
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
DV++ NAL+ MY KCG M DA+ VF M +D SWN ++ G + ++AL+ F M
Sbjct: 282 DVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQ 341
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR---A 494
+ KPD+V+ + +++A SG L G+E + R G+ ++ +IDM +
Sbjct: 342 NSAQKPDQVSVLNLIAASGRSGNLLNGKE-VHAYAIRNGLDSNMQIGNTLIDMYAKCCCV 400
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAA 522
+ A+E +E + + W T++A
Sbjct: 401 KHMGYAFECM----HEKDLISWTTIIAG 424
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/583 (31%), Positives = 322/583 (55%), Gaps = 44/583 (7%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
+PL I L+N ++YA VF+ + P+ + + I+ + + L F M
Sbjct: 33 TPLFIRRLLN----ASFIQYARQVFDQIP-HPDQGVHCSFITAYSRLSLNNEALRTFVSM 87
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
Q V +T P + K C ++A+ K++H LV + G V+ +AL+N Y K +
Sbjct: 88 HQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDL 147
Query: 186 EEALKVFEELPLRD-------------------------------VVLWNAMVNGYAQIG 214
A +F+ + ++D +V WNAM++ YAQ G
Sbjct: 148 GSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNG 207
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
++HK +F+RM E + T+ VLS +G + G + + S + V
Sbjct: 208 DYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVST 267
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
A+++MY K V + +F+ M +D+ +W++++ + Q G + L LF+ M SA +P
Sbjct: 268 AMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKP 327
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VT +VL AC+ L ++ G +I Y+ GL I +V++ +AL+ MY+KCG+
Sbjct: 328 NDVTLVSVLSACAQLGSVETGERIGSYVESRGL--------ISNVYVASALLGMYSKCGN 379
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F K+ ++D +WN MI+G ++G ++A+ +++ M E ++KP+ +TFVG+++A
Sbjct: 380 IIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTA 439
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+H+G + G EF M S + + P IEH+ C++D+ R+G+L +AYE M E N V
Sbjct: 440 CTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVV 499
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W TLL+ASR+H N +LAE+A +++ +LEP + GNYV++SNIY + G+++E L +R M+
Sbjct: 500 IWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLMK 559
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ V+K SW+E++D +H F+ D SHP + +Y+ + L
Sbjct: 560 DKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLA 602
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 36/340 (10%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL-------- 93
CA + G+++HS ++R G S +LIN Y+K + A +F+ +
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 94 SC----------------------EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
+C + ++ ++NAMIS + N KG F M+
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 132 PDKYTFPCLIKCCC---DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
P++ T ++ C D+ L +KK++ L ++ + +A++ Y+KC +++
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLND---NKNLGSNMIVSTAMLEMYVKCGAVDDG 282
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
VF+ + RDVV W+AM+ GYAQ G ++ALE+F M I + T+ VLSA +
Sbjct: 283 RLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQL 342
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G + G + V G S V V +AL+ MY K + +A +IF+ + ++D +WNS++
Sbjct: 343 GSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMI 402
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
G + + L++RM +P+ +TF ++ AC+H
Sbjct: 403 MGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTH 442
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 144/290 (49%), Gaps = 18/290 (6%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ TLAT L +CA +L+ G I + + + T+++ MY KC +
Sbjct: 227 NEITLATV---LSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGR 283
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF++++ +V T++AMI+G+ N + + L+ F +M+ + P+ T ++ C +
Sbjct: 284 LVFDHMA-RRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQL 342
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+V ++I V GL +VY+ SAL+ Y KC + +A ++F++LP RD V WN+M+
Sbjct: 343 GSVETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMI 402
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-------FFKNGRVVHGI 260
G A G A+ ++ RM + + + T G+++A G FF++ R H I
Sbjct: 403 MGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNI 462
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
+ ++D++ + + +A E ME E ++ W ++++
Sbjct: 463 ------SPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLS 506
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/503 (34%), Positives = 285/503 (56%), Gaps = 22/503 (4%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ------------ 183
+ P +K C + +H L + G D + +AL+N Y K
Sbjct: 60 SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119
Query: 184 --FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
+E KVF+E+P +DVV WN +V G A+ G +AL + R M ++G FT++ V
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSV 179
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
L + G +HG + G+ V V ++LIDMY ++++F+ + +D
Sbjct: 180 LPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDA 239
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
WNS++ Q G+ D L LF RML +G +P VTFS+++PAC +LA+L+ G+Q+H Y
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ G N VF++++L+DMY KCG++ A+ +F ++ D+ SW MI+G+
Sbjct: 300 VIRGGFDGN--------VFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHA 351
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
+ G +EAL +F M LKP+ +TF+ VL+ACSH+G + +G ++ M YG+VP++
Sbjct: 352 LHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSL 411
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
EH+ + D LGR G+L EAY M + VW TLL A ++H NT LAE A+++F
Sbjct: 412 EHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFD 471
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
LEP G+++++SN Y + G++ E +R +MR++ ++K P CSWIE+K+ H F++ D+
Sbjct: 472 LEPRSMGSHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDK 531
Query: 602 SHPEAKSIYAELHSLTARLREHG 624
SHP + I L+ + ++ G
Sbjct: 532 SHPWYERIIDALNVFSEQMVRQG 554
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 190/402 (47%), Gaps = 23/402 (5%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK----------- 79
L + +L+ CA G +H+ LR+G + +L+N+Y K
Sbjct: 57 VLTSLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEM 116
Query: 80 ---CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
++ VF+ + E +V ++N ++ G + + L M + G PD +T
Sbjct: 117 DGSAVVLESVRKVFDEMP-EKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFT 175
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
++ + V ++HG + G DV++GS+L++ Y C + ++KVF+ LP
Sbjct: 176 LSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLP 235
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
+RD +LWN+M+ G AQ G +AL +FRRM GI T + ++ A + G+
Sbjct: 236 VRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQ 295
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+H V++ G+D V + ++LIDMY K V A IF+ ++ DI SW +++ H G
Sbjct: 296 LHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGP 355
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
L LFDRM +P+ +TF VL ACSH G G+ N ++ + +
Sbjct: 356 AREALVLFDRMELGNLKPNHITFLAVLTACSHA-----GLVDKGWKYFNSMSDHYGI--V 408
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
+ + AL D + G + +A + M K AS W+ ++
Sbjct: 409 PSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 159/364 (43%), Gaps = 30/364 (8%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV----TGVLSALIMMGFFKNGRVVH 258
W + A G+FH A+ +F RM + +V G L + +G G +H
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 259 GIVVKMGYDSGVPVMNALIDMY--------------GKGKCVGEALEIFEMMEEKDIFSW 304
+ ++ G + NAL+++Y G + ++F+ M EKD+ SW
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+++ + G H L L M G +PD T S+VLP + A + G ++HG+
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATR 201
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
NG DDVF+ ++L+DMY C + VF + +D WN M+ G +G
Sbjct: 202 NGFH--------DDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNG 253
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
EAL +F M + +KP VTF ++ AC + L G++ L R G +
Sbjct: 254 SVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQ-LHAYVIRGGFDGNVFIS 312
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQR--VFQL 542
+ +IDM + G ++ A + + V W ++ LHG A + R + L
Sbjct: 313 SSLIDMYCKCGNVSIARRI-FDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNL 371
Query: 543 EPGH 546
+P H
Sbjct: 372 KPNH 375
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/633 (30%), Positives = 326/633 (51%), Gaps = 44/633 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L +++H+++LRT I S +++ S + YAL VF+++
Sbjct: 14 TILEKLSFC---KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P +N + + + F+ +R +G D+++F ++K V A+ E
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEG 130
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++HG+ FK+ D ++ + ++ Y C + A VF+E+ RDVV WN M+ Y +
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A ++F M + + ++SA G + R ++ +++ ++
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 274 NALIDMYGKGKCVGEALE-------------------------------IFEMMEEKDIF 302
AL+ MY C+ A E IF+ E+KD+
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
W ++++ + + LR+F+ M +G +PD+V+ +V+ AC++L L + +H I
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
VNGL S +NNAL++MY KCG + + VF KM +++V SW+ MI M
Sbjct: 371 HVNGLESELS--------INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G+ +AL +F+ M + ++P+EVTFVGVL CSHSG + +G++ M Y + P +E
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+ GRA L EA E+ +MP +N V+W +L++A R+HG +L + AA+R+ +L
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP H G VLMSNIY ++E+V +IR M ++NV K G S I+ H F+ D+
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602
Query: 603 HPEAKSIYAELHSLTARLREHGDC--CAGTLFD 633
H ++ IYA+L + ++L+ G C L D
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVD 635
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 318/583 (54%), Gaps = 11/583 (1%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ NL+ Q +H++++++ TS+++MY KC Q+ +A +F+ + + +V +
Sbjct: 64 CSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMP-KRDVAS 122
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N+MI GF F + + F M G+ D T L + + ++ IH
Sbjct: 123 WNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGI 182
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP--LRDVVLWNAMVNGYAQIGEFHKA 219
K+G+D DV + + + Y KC A VF+ + L+ V WN+M+ GYA + KA
Sbjct: 183 KIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKA 242
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+ F++M G T+ +LS+ + +G+++H +++G DS + V+N LI M
Sbjct: 243 VGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISM 302
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K +G A +F+ M K SW +++ + + G+ D + LF M + G +PDLVT
Sbjct: 303 YSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTI 362
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+++ C AL G+ I Y NGL D++ + NAL+D+Y KCGSM +A+
Sbjct: 363 ISLMSGCGQTGALELGKWIDTYATANGLK--------DNLMVCNALIDVYAKCGSMDNAR 414
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+F M +K + SW +I G ++G+ KEAL +F M E LKP+ +TF+ VL AC+H+G
Sbjct: 415 ELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAG 474
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
FL +G E LM Y + P ++HY+C+ D+LGR G+L EA+E MP + + +W L
Sbjct: 475 FLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVL 534
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L+A ++H N + E A +F+LEP YV M+NIY + GK++ V IR M+
Sbjct: 535 LSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAM 594
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
K+PG S +++ H F DR HPE IY L +L +++E
Sbjct: 595 KSPGKSLVQVNGKTHEFTVEDRCHPEGLLIYETLENLALQMKE 637
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 222/443 (50%), Gaps = 18/443 (4%)
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN S V +N+ I+ + +A K L F M+Q G+ P+ TFP + K C ++
Sbjct: 10 FNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLN 69
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +H V K D+++ +++V+ Y+KC + A +F +P RDV WN+M+ G
Sbjct: 70 LKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILG 129
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ+G + + +F M EGI TV G+ + + + K +H +K+G D+
Sbjct: 130 FAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD 189
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEE--KDIFSWNSIMTVH---EQCGNHDGTLRLF 324
V V N I Y K G A +F+ +++ K SWNS++ + EQC G F
Sbjct: 190 VSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVG---FF 246
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ML GF+ DL T ++L +C L HG+ IH + + G C D+ + N
Sbjct: 247 KKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVG------CD--SDIQVINT 298
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY+KCG + A+ +F M K SW MI GY G EA+ +FS M KPD
Sbjct: 299 LISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPD 358
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VT + ++S C +G L G+ ++ + G+ + +ID+ + G ++ A EL
Sbjct: 359 LVTIISLMSGCGQTGALELGK-WIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELF 417
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
MP E + V W TL+A L+G
Sbjct: 418 YTMP-EKSLVSWTTLIAGCALNG 439
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 291/526 (55%), Gaps = 43/526 (8%)
Query: 54 IHSYMLRTGIIDSPLSITSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
IH+ M++TG+ ++ +++ LI + + YA+ VF + EPN+ +N M G
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ-EPNLLIWNTMFRGHA 64
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ L + M LG+LP+ YTFP L+K C A E ++IHG V KLG DLD+Y
Sbjct: 65 LSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLY 124
Query: 171 IGSALVNTYLKCQFMEEALKVFE-------------------------------ELPLRD 199
+ ++L++ Y++ +E+A KVF+ E+P++D
Sbjct: 125 VHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKD 184
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV WNAM++GYA+ G + +ALE+F+ M K + T+ V+SA G + GR VH
Sbjct: 185 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHL 244
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ G+ S + ++NALID+Y K V A +FE + KD+ SWN+++ + +
Sbjct: 245 WIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKE 304
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L LF ML +G P+ VT ++LPAC+HL A+ GR IH YI N K + +
Sbjct: 305 ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYI-------NKRLKGVTNA 357
Query: 380 F-MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ +L+DMY KCG + A+ VF M + ++SWN MI G+ M G+ A D+FS M +
Sbjct: 358 SSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRK 417
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ PD++TFVG+LSACSHSG L GR M Y + P +EHY C+ID+LG G
Sbjct: 418 NGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFK 477
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
EA E+ MP E + V+W +LL A ++H N +L E AQ + ++EP
Sbjct: 478 EAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 523
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 186/413 (45%), Gaps = 50/413 (12%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-- 96
L+ CA ++GQ+IH ++L+ G TSLI+MY + +++ A VF+ S
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 97 ----------------------------PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+V ++NAMISG+ + L+ F M +
Sbjct: 155 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 214
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
V PD+ T ++ C ++ +++H + G ++ I +AL++ Y KC +E A
Sbjct: 215 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETA 274
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+FE L +DV+ WN ++ GY + + +AL +F+ M + G + T+ +L A +
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334
Query: 249 GFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G GR +H + K G + ++ +LIDMY K + A ++F+ M + + SWN+
Sbjct: 335 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 394
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI-----HGY 361
++ G + LF +M G PD +TF +L ACSH L GR I Y
Sbjct: 395 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 454
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA-QMVFTKMSKKDVASW 413
+ L G ++D+ CG ++A +M+ T + D W
Sbjct: 455 KITPKLEHYG------------CMIDLLGHCGLFKEAKEMIRTMPMEPDGVIW 495
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 14/293 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T + + CA +++ G+++H ++ G + + +LI++YSKC +++ A +F
Sbjct: 221 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEG 280
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS + +V ++N +I G+ + + L F M + G P+ T ++ C + A+
Sbjct: 281 LSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDI 339
Query: 153 VKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ IH + K G+ + ++L++ Y KC +E A +VF+ + R + WNAM+ G+
Sbjct: 340 GRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGF 399
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A G+ + A ++F +M K GI T G+LSA G GR I M D +
Sbjct: 400 AMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGR---HIFRSMSQDYKI 456
Query: 271 -PVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHD 318
P + +ID+ G EA E+ M E D W S++ + C H+
Sbjct: 457 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL---KACKMHN 506
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF + + ++ WN M G+ + AL ++ CM L P+ TF +L +C+ S
Sbjct: 44 VFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKA 103
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+G++ + + G + +T +I M + G+L +A ++ + + V + L+
Sbjct: 104 FREGQQIHGHV-LKLGYDLDLYVHTSLISMYVQNGRLEDARKV-FDQSSHRDVVSYTALI 161
Query: 521 AASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
G + AQ++F P ++ M + Y G Y+E L++ M + NVR
Sbjct: 162 KGYASRGYIE----NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 217
Query: 580 KN 581
+
Sbjct: 218 PD 219
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 320/595 (53%), Gaps = 13/595 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T AT ++ T L++ +IHS+++R G S + SL++ Y K C + A +F
Sbjct: 145 TFATLLSGFD---DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLF 201
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + + +V ++N MI+G+ F + L F MR + P +TF ++ V
Sbjct: 202 SEMPTKDSV-SFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ ++IHGL K D+++ +AL++ Y K +++ A +F+E+P D V +N ++ GY
Sbjct: 261 IFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGY 320
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A G++ K+ ++F+R+ F +LS + GR H V S V
Sbjct: 321 AWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEV 380
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL+DMY K + +A IF + ++ W +I++++ Q G H+ L++F M
Sbjct: 381 QVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRE 440
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
D TF++ L A ++LA++ G+Q+H ++ GL + VF + L+DMY
Sbjct: 441 NVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGL--------LSSVFSGSVLVDMYA 492
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
CGSM+DA VF +M +++ WN +I Y +G + F+ M E+ L PD V+F+
Sbjct: 493 NCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLS 552
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL+ACSH G + + + M Y + P +HY +ID+L R+G+ NEA L MP E
Sbjct: 553 VLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFE 612
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDI 569
+ V+W ++L + R+H N DLA+ AA ++F+++ YV MSNIY GK+E +
Sbjct: 613 PDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKV 672
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ MR++ V+K SW+E+ +H F ++DR+HP+ + I +++SL + + G
Sbjct: 673 KKAMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEG 727
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 224/468 (47%), Gaps = 15/468 (3%)
Query: 67 PLSITSLINM----YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFF 122
P TS +NM Y K + A +F ++ N ++ MI G+ N+ + + +
Sbjct: 73 PYRNTSSVNMMVSGYVKSRNLFRARELFESMFSR-NEVSWTIMIGGYSQNNQPKEAFNLY 131
Query: 123 NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
M + GV PD TF L+ D + EV +IH + + G + + ++LV++Y K
Sbjct: 132 TEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKT 191
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
++ A ++F E+P +D V +N M+ GY + G +AL++F +M S FT +L
Sbjct: 192 CCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+ G+ +HG+ +K Y + V NAL+D Y K + A +F+ M E D
Sbjct: 252 GMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGV 311
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+N I+T + G ++ + LF R+ F F+T+L + L GRQ H
Sbjct: 312 SYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQA 371
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
VV + +V + NAL+DMY KC DA +F ++ ++ W +I Y
Sbjct: 372 VVTTA--------VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQ 423
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G +EAL MF M + D+ TF L A ++ +S G++ L R G++ ++
Sbjct: 424 KGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ-LHSSVIRLGLLSSVF 482
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ ++DM G + +A E+ MP+ N V W L++A +G+ +
Sbjct: 483 SGSVLVDMYANCGSMKDAIEVFKEMPDR-NIVCWNALISAYSQNGDAE 529
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 8/304 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
N PF +A+++L NL G++ H+ + T + +L++MY+KC + + A
Sbjct: 345 NFPFATMLSVAAIEL-----NLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDA 399
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F NL+ N + A+IS + F + L F M + V D+ TF +K +
Sbjct: 400 NRIFANLAYR-NSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASAN 458
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ +V K++H V +LGL V+ GS LV+ Y C M++A++VF+E+P R++V WNA+
Sbjct: 459 LASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNAL 518
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-G 265
++ Y+Q G+ F M + G++ + VL+A G + + ++
Sbjct: 519 ISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYK 578
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
D +ID+ + EA I EM E D W+S++ N D +
Sbjct: 579 LDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAA 638
Query: 325 DRML 328
D++
Sbjct: 639 DQLF 642
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/520 (34%), Positives = 299/520 (57%), Gaps = 12/520 (2%)
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+NA++SG+ D + + + G LPD +TFP ++K C + + E +++HG++
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
K+G ++Y+ ++LV+ Y C+ +A +VF+E+ +RDVV W +++GY + G F +A+
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
+F RM E + T VL A G+ G+ +HG+ K + G+ V NAL+DMY
Sbjct: 122 LFLRMDVEP---NAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K C+ A ++F+ + EKDI SW SI++ QC L LF M S+G +PD + ++
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL AC+ L AL +GR +H +I + D+ + A++DMY KCG + + +
Sbjct: 239 VLSACARLGALDYGRWVHEHIDRKAIKW--------DIQIGTAMVDMYAKCGCIEMSMQI 290
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F M K+V +WN ++ G M G + L++F M ++P+EVTF+ +L+AC H G +
Sbjct: 291 FNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLV 350
Query: 462 SQGREFLPLME-SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
++GR++ M+ +Y + P +EHY C++D+L RA L+EA EL AMP + + LL
Sbjct: 351 NEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALL 410
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
+A + +GNT+L + R +L+ G YVL+SNI+ ++++V IR M+++ ++K
Sbjct: 411 SACKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKK 470
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
PG + IEL H FI D HP+ K I L L+ ++
Sbjct: 471 PPGSTVIELDGKAHEFIVGDTRHPQDKRIRLLLKILSDQI 510
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 167/326 (51%), Gaps = 4/326 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ CA + +G+++H +++ G + + SL++ YS C + A VF+ +
Sbjct: 39 AVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVR 98
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ +ISG+ + + F M V P+ TF ++ C + K I
Sbjct: 99 -DVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGI 154
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGL FK + + + +AL++ Y+KC + A +VF+EL +D+V W ++++G Q
Sbjct: 155 HGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCP 214
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F+ M GI +T VLSA +G GR VH + + + + A+
Sbjct: 215 KEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAM 274
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K C+ +++IF M K++ +WN+++ G+ L LF+ M+ G +P+
Sbjct: 275 VDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNE 334
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI 362
VTF +L AC H + GRQ ++
Sbjct: 335 VTFLAILTACCHCGLVNEGRQYFNWM 360
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 294/521 (56%), Gaps = 14/521 (2%)
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYS--NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
Y+ +F++++ PN + +N M+ + +D+ L ++ M+ L + P+ +TFP +
Sbjct: 67 YSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLT-LHLYHQMKTLNISPNNFTFPFVFL 125
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C ++ + + H VFKLGLD D + +++V Y +C A KVF+E+ +D+V
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN++++GYA++G +A+EVF R+ +E G ++ VL A +G + GR V G V
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
V+ G + +ALI MY K + + IF+ M +D +WN+ ++ + Q G D +
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF M G P+ VT + VL AC+ + AL G+Q+ Y GL D+F+
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH--------DIFV 357
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--A 439
AL+DMY KCGS+ AQ VF M +K+ ASWN MI G+ KEAL +F M +
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+P+++TFV +LSAC H+G + +G +M + +G+VP IEHY+C++D+L RAG L E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A+++ MP + + V L +A + N D+ E Q + +L+P + GNY++ S IY
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+++ +R MR+ V K PGCSWIE+ + L F+S D
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 193/371 (52%), Gaps = 13/371 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA+ ++ + H + + G+ + ++ S++ MY +C + A VF+ ++ E ++ +
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEIT-EKDLVS 185
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
+N+++SG+ FA + ++ F +R + G PD+ + ++ C ++ + + + G V
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
+ G+ ++ YIGSAL++ Y KC + + ++F+ +P RD + WNA ++ YAQ G +A+
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F M + G+ ++ T+T VLSA +G G+ + G + V ALIDMY
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMY 365
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQPDLVT 338
K + A +F M K+ SWN++++ G L LF+RM G +P+ +T
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDIT 425
Query: 339 FSTVLPACSHLAALMHGRQIHGYI-VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
F ++L AC H + G ++ + + GL + + + ++D+ ++ G + +
Sbjct: 426 FVSLLSACVHAGLVDEGYRLFDMMSTLFGL--------VPKIEHYSCMVDLLSRAGHLYE 477
Query: 398 AQMVFTKMSKK 408
A V KM +K
Sbjct: 478 AWDVIEKMPEK 488
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 139/269 (51%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ ++ L C +L+ G+ + +++ G+ + ++LI+MYSKC ++ + +F+ +
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ T+NA IS + N A + + F+ M++ GV P+K T ++ C + A+
Sbjct: 281 PSR-DFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++ GL D+++ +AL++ Y KC +E A +VF ++P ++ WNAM++ A
Sbjct: 340 KQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASH 399
Query: 214 GEFHKALEVFRRMSKEG--IWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ +AL +F RMS EG + T +LSA + G G R+ + G +
Sbjct: 400 GKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 459
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ + + EA ++ E M EK
Sbjct: 460 EHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 317/583 (54%), Gaps = 20/583 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK-CCQMKYALFVFNNLSCEP 97
+Q C +L+ ++IH+ +LR+ ++D+ L +T N + K ++Y
Sbjct: 91 IQRC---NDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDWSF 147
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ F N +ISG+ + +F + + + + G +PD YT P ++K C + EVK+IH
Sbjct: 148 SSFPCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIH 207
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L K L D+++ ++ V+ Y C A KVF+ +P+RDVV W +++GY + G F+
Sbjct: 208 TLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFN 267
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+ +F RM + + T +L A +G G+ +HG+V K + + V N L+
Sbjct: 268 DAVALFLRMD---VAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLM 324
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPD 335
DMY K + V +A +F+ + EKDI SW S+++ V QC +L LF ML +GF+PD
Sbjct: 325 DMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQE--SLDLFYEMLGSGFEPD 382
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
V ++VL AC+ L L +GR +H YI + + DV + +L+DMY KCG +
Sbjct: 383 GVILTSVLSACASLGLLDYGRWVHEYIDHSRIKW--------DVHIGTSLIDMYAKCGCI 434
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
AQ +F + K++ +WN I G ++G G+EAL F + E+ +P+E+TF+ V SAC
Sbjct: 435 EMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSAC 494
Query: 456 SHSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
HSG + +GR + M S Y + P +EHY C++D+L RA + EA EL MP +
Sbjct: 495 CHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQ 554
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+ LL+AS +GN +L + V E G YVL+SN Y K+ EV +R M+
Sbjct: 555 IIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMK 614
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++ + K PG S I + H F+ D +HP+++ I+ L+ L
Sbjct: 615 EKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHVLLNILA 657
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T A L+ CA + + + ++IH+ ++T + S +++YS C A VF+ +
Sbjct: 186 TVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFM 245
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+V ++ +ISG+ + F M V P+ TF ++ C + +
Sbjct: 246 PVR-DVVSWTGLISGYMKAGLFNDAVALFLRM---DVAPNAATFVSILGACGKLGCLNLG 301
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IHGLV K ++ + + L++ Y+KC+ + +A ++F+E+P +D+V W +M++G Q
Sbjct: 302 KGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQY 361
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
++L++F M G +T VLSA +G GR VH + V +
Sbjct: 362 QCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIG 421
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+LIDMY K C+ A ++F ++ K+I +WN+ + G+ L+ F ++ +G +
Sbjct: 422 TSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTR 481
Query: 334 PDLVTFSTVLPACSHLAALMHGR 356
P+ +TF V AC H + GR
Sbjct: 482 PNEITFLAVFSACCHSGLVDEGR 504
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 316/579 (54%), Gaps = 10/579 (1%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL+ G+ IH +++ G+ + +L+ +YS+ + + A VF ++ E ++ ++N+M+
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT-ERDLISWNSMM 1121
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
+ + + GL + Q+G + + TF + C + ++E K +H L+ G
Sbjct: 1122 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFH 1181
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+ +G+ALV Y K M EA KV + +P D V WNA++ G+A+ E ++A++ ++ +
Sbjct: 1182 DFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLI 1241
Query: 227 SKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
++GI + T+ VL A K+G +H +V G++S V N+LI MY K
Sbjct: 1242 REKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGD 1301
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ + IF+ + K +WN+++ + G + L++F M + G D +FS L A
Sbjct: 1302 LNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAA 1361
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
++LA L G+Q+HG ++ G D+ + NA MDMY KCG M D + +
Sbjct: 1362 TANLAVLEEGQQLHGLVIKLGFES--------DLHVTNAAMDMYGKCGEMHDVLKMLPQP 1413
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+ SWNI+I + G ++A + F M + KPD VTFV +LSAC+H G + +G
Sbjct: 1414 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGL 1473
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M +GV P IEH C+ID+LGR+G+L+ A MP N + WR+LLAA R+
Sbjct: 1474 AYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRI 1533
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +LA A+ + +L+P YVL SN+ GK+E+V ++R M N++K P CS
Sbjct: 1534 HGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACS 1593
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
W++LKD +H+F ++ HP+A I A+L L +E G
Sbjct: 1594 WVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAG 1632
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 178/552 (32%), Positives = 292/552 (52%), Gaps = 12/552 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLC + ++G IH++++ G T LI Y K + A VF+ + E +
Sbjct: 37 LQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMP-ERS 95
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ AM+SG+ N K F+ MR GV +++T+ ++ C + + ++ G
Sbjct: 96 VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K ++++ SALV+ + KC ME+A +F + RDVV WNAM+ GYA G
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+ +FR M + G+ +T+ VL A G +HGI+ ++GY S V LI+
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDL 336
Y K + A ++ + M +KD+FS +++T HE + D L LF M D
Sbjct: 276 AYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVD-ALDLFKEMNQMNIGMDD 334
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
V ++L C++LA+ G QIH + + + DV M NAL+DMY K G +
Sbjct: 335 VILCSMLNICANLASFALGTQIHAFAL--------KYQPSYDVAMGNALIDMYAKSGEIE 386
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA+ F +M +K+V SW +I GY G G A+ ++ M KP++VTF+ +L ACS
Sbjct: 387 DAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACS 446
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G ++G E M ++Y + P EHY+C++D+ R G L EAY L + + N +W
Sbjct: 447 HTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLW 506
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+L AS ++G L + AA +F ++P + NYV++++IY A G +++ IR M ++
Sbjct: 507 GAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEER 566
Query: 577 NVRKNPGCSWIE 588
+ +KN G S+ +
Sbjct: 567 STKKNAGYSFFQ 578
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 269/533 (50%), Gaps = 24/533 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ G+ +H++ + + +LINMYSK +++A +VF+ + N +++ M
Sbjct: 758 TSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR-HRNEASWSTM 816
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKIHGLVFKLG 164
+SG+ + + F M LGV P+ + LI C + E ++HG V K G
Sbjct: 817 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 876
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ DVY+G+ALV+ Y + A K+FEE+P +VV W +++ GY+ G + L V++
Sbjct: 877 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 936
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM +EG+ ++ T V S+ ++ G V G +++ G++ V V N+LI M+
Sbjct: 937 RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 996
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V EA +F+ M E DI SWN++++ + G +LR F M + + T S++L
Sbjct: 997 SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 1056
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
CS + L GR IHG +V GL N V + N L+ +Y++ G DA++VF
Sbjct: 1057 VCSSVDNLKWGRGIHGLVVKLGLDSN--------VCICNTLLTLYSEAGRSEDAELVFQA 1108
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M+++D+ SWN M+ Y DG+ + L + + + + + VTF L+ACS+ L +
Sbjct: 1109 MTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES 1168
Query: 465 REFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ L+ +V + V + M G+ G + EA ++ MP + + V W L+
Sbjct: 1169 KIVHALI-----IVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALI 1222
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
+ + A + A ++ + E G NY+ M ++ A +++L +H M
Sbjct: 1223 GGHAENEEPNEA-VKAYKLIR-EKGIPANYITMVSVLGACSAPDDLL--KHGM 1271
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 191/401 (47%), Gaps = 11/401 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D + +++ C D A + IH + G D+++ + L+ Y+K + A VF
Sbjct: 29 DPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVF 88
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ +P R VV W AMV+GY+Q G F KA +F M G+ ++FT L A +
Sbjct: 89 DGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLD 148
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G V G + K + + V +AL+D + K + +A +F M E+D+ SWN+++ +
Sbjct: 149 MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA 208
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G D + +F ML G PD T +VL A + L+ QIHG I G
Sbjct: 209 VQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS--- 265
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG-QGKEALD 431
DI + L++ Y K GS+R A+ + M KKD+ S +I GY +G +ALD
Sbjct: 266 -YDI----VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALD 320
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M + + D+V +L+ C++ + G + + +Y + +IDM
Sbjct: 321 LFKEMNQMNIGMDDVILCSMLNICANLASFALGTQ-IHAFALKYQPSYDVAMGNALIDMY 379
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++G++ +A + A E N + W +L++ HG +A
Sbjct: 380 AKSGEIEDA-KRAFDEMEEKNVISWTSLISGYAKHGYGHMA 419
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 188/387 (48%), Gaps = 13/387 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
FP +K ++ + + K +H ++L ++ + L+N Y K +E A VF+E+
Sbjct: 748 NFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEM 805
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN-G 254
R+ W+ M++GY ++G + +A+ +F +M G+ + F V +++A G+ + G
Sbjct: 806 RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEG 865
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
VHG VVK G V V AL+ YG V A ++FE M + ++ SW S+M +
Sbjct: 866 FQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDS 925
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
GN L ++ RM G + TF+TV +C L + G Q+ G+I+ G
Sbjct: 926 GNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFE------ 979
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
D V + N+L+ M++ S+ +A VF M++ D+ SWN MI Y G +E+L F
Sbjct: 980 --DSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 1037
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + + T +LS CS L GR L+ + G+ + ++ + A
Sbjct: 1038 WMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV-VKLGLDSNVCICNTLLTLYSEA 1096
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLA 521
G+ +A EL E + + W +++A
Sbjct: 1097 GRSEDA-ELVFQAMTERDLISWNSMMA 1122
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 329/587 (56%), Gaps = 20/587 (3%)
Query: 47 NLQKGQEIHSYMLRTG--IIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA 104
+ + +H +++ G ++ ++S I MY++ +++A VF+N E N +N
Sbjct: 201 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN-CLERNTEVWNT 259
Query: 105 MISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
MIS F N+F+ +G+ FF + D+ T I + +++H V K
Sbjct: 260 MISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN 319
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
V + +AL+ Y +C ++ + K+F+ +P +DVV WN M++ + Q G +AL +F
Sbjct: 320 VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 379
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVPVMNALIDMYGK 282
M K+ + + TVT +LSA + G+ HG +++ G G+ + LIDMY K
Sbjct: 380 YEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDMYAK 437
Query: 283 GKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ A +FE E+D +WNS+M+ + Q G D + +ML P++VT +
Sbjct: 438 SGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLA 497
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++LPAC+ + G+Q+HG+ + N L +N VF+ AL+DMY+K GS+ A+
Sbjct: 498 SILPACNPSGYIDWGKQLHGFSIRNDLDQN--------VFVATALIDMYSKSGSIAHAEN 549
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF+K ++K + +++ MILGYG G G+ AL MF M ++ ++PD VT V VLSACS++G
Sbjct: 550 VFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGL 609
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTL 519
+ +G + M + Y + P+ EH+ CV DMLGRAG++++AYE + + + N + +W +L
Sbjct: 610 VDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSL 669
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEP--GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LAA R+H +L ++ A+++ ++E G G +VL+SNIY +E V +R MR++
Sbjct: 670 LAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERG 729
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K G SWIE+ ++ F S DR HP++ IY+ L L ++ G
Sbjct: 730 LKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAG 776
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 266/558 (47%), Gaps = 37/558 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC---------------CQM 83
L+ CA NL G+ +H++ LR + S + SL+NMYS C C +
Sbjct: 79 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 138
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+F + + V +N +I+ + + + + F+ M ++G+ P +F +
Sbjct: 139 VRKVF---DTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 195
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
+ +HG++ KLG + D+Y+ S+ + Y + +E A KVF+ R+
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 255
Query: 202 LWNAMVNGYAQIGEFHKALEV-FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
+WN M++ + Q + +++ F+ + E + T+ +SA + F+ +H
Sbjct: 256 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAF 315
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
V+K + V VMNALI MY + + + +IF+ M EKD+ SWN++++ Q G +D
Sbjct: 316 VIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEA 375
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M D VT + +L A S L G+Q HGY++ NG+ G
Sbjct: 376 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG--------- 426
Query: 381 MNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
M++ L+DMY K G + AQ VF K ++D A+WN M+ GY +G +A + M +
Sbjct: 427 MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLD 486
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
K+ P+ VT +L AC+ SG++ G++ L R + + T +IDM ++G +
Sbjct: 487 QKVMPNVVTLASILPACNPSGYIDWGKQ-LHGFSIRNDLDQNVFVATALIDMYSKSGSIA 545
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNI 556
A E + NE + V + T++ HG + A R+ + ++P ++S
Sbjct: 546 HA-ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC 604
Query: 557 YVAGGKYEEVLDIRHTMR 574
A G +E L I +MR
Sbjct: 605 SYA-GLVDEGLQIFESMR 621
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 248/546 (45%), Gaps = 68/546 (12%)
Query: 74 INMYSKCC------QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
IN+ + C Q+ A +F+ L P+ +N +I G N+F + L F+++M+
Sbjct: 5 INLVHELCRLCQEGQLHLARQLFDALP-RPSTVLWNTIIIGLVCNNFPDEALLFYSNMKS 63
Query: 128 LG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
V D YT+ ++K C D ++ K +H + ++ + ++L+N Y C
Sbjct: 64 SSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSST 123
Query: 186 -------------EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ KVF+ + R VV WN ++ Y + + +A++ F M K GI
Sbjct: 124 TPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIK 183
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEAL 290
S + V A +G FKN VVHG++VK+G Y + + V+++ I MY + C+ A
Sbjct: 184 PSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAK 243
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++F+ E++ WN++++ Q + +G F + S D VT + + A SHL
Sbjct: 244 KVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHL 303
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
Q+H +++ N + V + NAL+ MY++C S+ + +F M +KD
Sbjct: 304 QKFELAEQLHAFVIKN--------VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKD 355
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-----------HS 458
V SWN MI + +G EAL +F M + L D VT +LSA S H
Sbjct: 356 VVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHG 415
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL-ALAMPNEANPVVWR 517
L G +F ++ Y +IDM ++G + A + + +E + W
Sbjct: 416 YLLRNGIQF-----------EGMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI--------YVAGGKYEEVLDI 569
++++ +G D A + +++ L+ N V +++I Y+ GK I
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQM--LDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSI 520
Query: 570 RHTMRQ 575
R+ + Q
Sbjct: 521 RNDLDQ 526
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 4/327 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++++ +H + +++H+++++ + + +LI MYS+C + + +F+N+
Sbjct: 292 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 351
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++N MIS F N + L F M++ ++ D T L+ D+
Sbjct: 352 P-EKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIG 410
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYA 211
K+ HG + + G+ + + S L++ Y K +E A VFE+ RD WN+M++GY
Sbjct: 411 KQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 469
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G +A + R+M + + + T+ +L A G+ G+ +HG ++ D V
Sbjct: 470 QNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVF 529
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V ALIDMY K + A +F EK I ++++++ + Q G + L +F RM +G
Sbjct: 530 VATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG 589
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQI 358
QPD VT VL ACS+ + G QI
Sbjct: 590 IQPDAVTLVAVLSACSYAGLVDEGLQI 616
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C + G+++H + +R + + T+LI+MYSK + +A VF+
Sbjct: 493 VVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFS 552
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+ E ++ TY+ MI G+ + L F+ M++ G+ PD T ++ C
Sbjct: 553 KAN-EKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC 604
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 315/576 (54%), Gaps = 15/576 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
+ +H + G ++L +Y K + A VF+ + P+ +N +++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVP-SPDTILWNTLLAGLP 191
Query: 111 SNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
++ L+ F M G V PD T ++ + + + +HG K GL
Sbjct: 192 GSE----ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ + L++ Y KC M+ A +F+ + D+V +NA+++GY+ G ++E+F+ ++
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
G + T+ V+ G R +H VVK D+ V AL +Y + + A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IF+ M EK + SWN++++ + Q G + + LF M QP+ +T S+ L AC+HL
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
AL G+ +H I L N V++ AL+DMY KCGS+ +A+ +F +M K+
Sbjct: 428 GALSLGKWVHRIISKEKLELN--------VYVMTALIDMYAKCGSIAEARSIFDRMDNKN 479
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V SWN MI GYG+ GQG EAL ++ M +A++ P TF+ V+ ACSH G + +G++
Sbjct: 480 VVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFR 539
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA-NPVVWRTLLAASRLHGN 528
+M + Y + P IEH TC++D+LGRAG+LNEA EL P A P VW LL A +H N
Sbjct: 540 VMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKN 599
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
+DLA++A+Q++F+L+ + G YVL+SN+Y + Y E +R + + + K PGC+ IE
Sbjct: 600 SDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIE 659
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ D H F++ D HP++++IY+ L LTA++ E G
Sbjct: 660 IGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAG 695
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 170/325 (52%), Gaps = 1/325 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL+ A +++ G+ +H Y ++ G+ + +T L+++YSKC M A F+F+ +
Sbjct: 214 TLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRM 273
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P++ YNA+ISG+ N ++ F + G P+ T +I L
Sbjct: 274 D-NPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLA 332
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ +H V K LD D + +AL Y + ME A +F+ + + + WNAM++GYAQ
Sbjct: 333 RCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQN 392
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G A+ +F+ M + + + T++ LSA +G G+ VH I+ K + V VM
Sbjct: 393 GLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVM 452
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
ALIDMY K + EA IF+ M+ K++ SWN++++ + G L+L+ ML A
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARIL 512
Query: 334 PDLVTFSTVLPACSHLAALMHGRQI 358
P TF +V+ ACSH + G+++
Sbjct: 513 PTSSTFLSVIYACSHGGLVDEGQKV 537
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/598 (32%), Positives = 324/598 (54%), Gaps = 27/598 (4%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L + CA +L+ ++HS++L TG T+L+++YSKCC
Sbjct: 29 FTFPFVL-------KACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHS 81
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF+ + + ++ ++N++IS + DF + M+ LG+ TF + C
Sbjct: 82 ARLVFDQMPIK-SLVSWNSIISA-HCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASC 139
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
++ + IHG + KLGLDL + + +++++ Y++ ++ AL VF L + +V W
Sbjct: 140 ----SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWT 195
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ GY G+ K VF +M + + ++S + G +VH +++K
Sbjct: 196 IILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKS 255
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G+D P+ N L+ MY K K + A +F+ + EK +F W S+++ + Q G + L LF
Sbjct: 256 GFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLF 315
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ +L +P+ +T +TVL AC+ + +L G +I YI++NGL D+ + +
Sbjct: 316 NMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLG--------SDLRVQTS 367
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKP 443
L+ M+ KCGS++ AQ +F ++ KD+A W+ MI GY + G GKEAL++F M E +KP
Sbjct: 368 LIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKP 427
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D + + VL ACSHSG + G ++ M+ +G+ P+I+HY+C++D+LGRAG + A
Sbjct: 428 DAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRT 487
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP VW L+A H N +L E AA+ +F LEP GN+VLM+N+Y + GK+
Sbjct: 488 IQEMPVLVQARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKW 547
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+E R + + + K PG S IE+ +H + +SH E+ ++H L +R
Sbjct: 548 KEAAKARSIINARGLVKEPGWSQIEIDGAVHVLAAEGQSHLES----IDIHELCPEMR 601
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 196/399 (49%), Gaps = 14/399 (3%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
GV ++TFP ++K C + ++ + K+H + G V++ +ALV+ Y KC A
Sbjct: 23 GVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSA 82
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
VF+++P++ +V WN++++ + + ++ + ++M G+ +S T TG L++ +
Sbjct: 83 RLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSL- 141
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
G +HG + K+G D +P+ N+++ MY + + AL +F + +K I SW I+
Sbjct: 142 ---PQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIIL 198
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ G+ +F++M PD + F ++ C L+ +H ++ +G
Sbjct: 199 GGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFD 258
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
KD D N L+ MY KC + A+ VF + +K V W MI GY G E
Sbjct: 259 H----KDPID----NLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNE 310
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +F+ + +P+E+T VLSAC+ G L G E + G+ + T +I
Sbjct: 311 ALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLN-GLGSDLRVQTSLI 369
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G + +A L +PN+ + VW ++ +HG
Sbjct: 370 HMFCKCGSIKKAQALFERIPNK-DLAVWSAMINGYAVHG 407
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
++G TF VL AC+ L +L ++H +I++ G + VF+ AL+D+
Sbjct: 21 TSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAH--------VFVQTALVDV 72
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KC A++VF +M K + SWN +I + D ++ + M L+ TF
Sbjct: 73 YSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATF 132
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
G L++CS L QG + ++ G+ + ++ M R Q++ A + +
Sbjct: 133 TGFLASCS----LPQGLSIHGYI-TKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTL- 186
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAA 536
++ + V W +L G D+A++ A
Sbjct: 187 HQKSIVSWTIILGGYLSAG--DVAKVFA 212
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 134/284 (47%), Gaps = 19/284 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
TLAT +++ CA +L+ G+EI Y+L G+ TSLI+M+ KC +K A +
Sbjct: 328 LTLATVLSA---CAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQAL 384
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVM 148
F + ++ ++AMI+G+ + + L+ F+ M+ ++G+ PD + ++ C
Sbjct: 385 FERIP-NKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSG 443
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
+ + +K + G++ + S LV+ + ++E AL+ +E+P L +W
Sbjct: 444 LIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPF 503
Query: 207 VNG-----YAQIGEF--HKALEVFRRMSKEGIWMSR-FTVTGVLSALIMMGFFKNGRVVH 258
++ ++GEF ++ R + + M+ +T G N R
Sbjct: 504 LSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINAR--- 560
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
G+V + G+ S + + A+ + +G+ E+++I E+ E I
Sbjct: 561 GLVKEPGW-SQIEIDGAVHVLAAEGQSHLESIDIHELCPEMRIL 603
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 326/601 (54%), Gaps = 21/601 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ P L C++ L G+++H ++L+ G SLI++YS+ ++
Sbjct: 151 YTFPPVLKACLS----------LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEV 200
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF ++ +V ++NAMISGF N + L + M+ V D T ++ C
Sbjct: 201 AHKVFVDMPVR-DVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICA 259
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
V+ +H V K GL+ DV++ +AL+N Y K +++A +VF+ + +RD+V WN+
Sbjct: 260 QSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNS 319
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++ Y Q + AL F+ M G+ TV + S + + GR VHG VV+
Sbjct: 320 IIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCR 379
Query: 266 Y-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ + + + NAL++MY K + A +FE + +D+ SWN+++T + Q G + +
Sbjct: 380 WLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY 439
Query: 325 DRMLSA-GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+ M P+ T+ ++LPA SH+ AL G +IHG ++ N L DVF+
Sbjct: 440 NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCL--------FLDVFVAT 491
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
L+DMY KCG + DA +F ++ ++ WN +I G+ G G++AL +F M +K
Sbjct: 492 CLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKA 551
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
D +TFV +LSACSHSG + + + M+ Y + P ++HY C++D+ GRAG L +AY L
Sbjct: 552 DHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNL 611
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP +A+ +W TLLAA R+HGN +L A+ R+ +++ + G YVL+SNIY GK+
Sbjct: 612 VSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKW 671
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
E + +R R + +RK PG S + + + F + ++SHP+ IY EL L A+++
Sbjct: 672 EGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSL 731
Query: 624 G 624
G
Sbjct: 732 G 732
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 272/490 (55%), Gaps = 17/490 (3%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
TN+ +++H+ +L G + +T L+ +Y+ + + F ++ N+F++N+M
Sbjct: 62 TNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ-RKNIFSWNSM 120
Query: 106 ISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+S + +D + L GV PD YTFP ++K C +++ + +K+H V K+G
Sbjct: 121 VSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMG 177
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
+ DVY+ ++L++ Y + +E A KVF ++P+RDV WNAM++G+ Q G +AL V
Sbjct: 178 FEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLD 237
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM E + M TV+ +L G +VH V+K G +S V V NALI+MY K
Sbjct: 238 RMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFG 297
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ +A +F+ ME +D+ SWNSI+ +EQ + L F ML G +PDL+T ++
Sbjct: 298 RLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLAS 357
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMVFT 403
L+ GR +HG++V C+ ++ D+ + NAL++MY K GS+ A+ VF
Sbjct: 358 IFGQLSDRRIGRAVHGFVV--------RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFE 409
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLS 462
++ +DV SWN +I GY +G EA+D ++ M E + + P++ T+V +L A SH G L
Sbjct: 410 QLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
QG + + + + + TC+IDM G+ G+L +A L +P E + V W ++++
Sbjct: 470 QGMKIHGRL-IKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETS-VPWNAIISS 527
Query: 523 SRLHGNTDLA 532
+HG+ + A
Sbjct: 528 LGIHGHGEKA 537
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 294/521 (56%), Gaps = 14/521 (2%)
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYS--NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
Y+ +F++++ PN + +N M+ + +D+ L ++ M+ L + P+ +TFP +
Sbjct: 67 YSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLT-LHLYHQMKTLNISPNNFTFPFVFL 125
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C ++ + + H VFKLGLD D + +++V Y +C A KVF+E+ +D+V
Sbjct: 126 ACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVS 185
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN++++GYA++G +A+EVF R+ +E G ++ VL A +G + GR V G V
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
V+ G + +ALI MY K + + IF+ M +D +WN+ ++ + Q G D +
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF M G P+ VT + VL AC+ + AL G+Q+ Y GL D+F+
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQH--------DIFV 357
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--A 439
AL+DMY KCGS+ AQ VF M +K+ ASWN MI G+ KEAL +F M +
Sbjct: 358 ATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+P+++TFV +LSAC H+G + +G +M + +G+VP IEHY+C++D+L RAG L E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
A+++ MP + + V L +A + N D+ E Q + +L+P + GNY++ S IY
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+++ +R MR+ V K PGCSWIE+ + L F+S D
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 139/269 (51%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ ++ L C +L+ G+ + +++ G+ + ++LI+MYSKC ++ + +F+ +
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGM 280
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ T+NA IS + N A + + F+ M++ GV P+K T ++ C + A+
Sbjct: 281 PSR-DFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLG 339
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K++ GL D+++ +AL++ Y KC +E A +VF ++P ++ WNAM++ A
Sbjct: 340 KQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASH 399
Query: 214 GEFHKALEVFRRMSKEG--IWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
G+ +AL +F RMS EG + T +LSA + G G R+ + G +
Sbjct: 400 GKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 459
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ + + EA ++ E M EK
Sbjct: 460 EHYSCMVDLLSRAGHLYEAWDVIEKMPEK 488
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/590 (32%), Positives = 322/590 (54%), Gaps = 12/590 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGII-DSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ CA +L G+ +H+ +R+ + T+++ MY++C M A+ + L +P
Sbjct: 104 LRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLE-KP 162
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFF-NHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
++ ++++G+ N A + L+FF ++ GV+ T + + V + +
Sbjct: 163 DIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQAC 222
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V + L D+ + + +++ Y+K + ++++FE + RDV+ W+ M+ GY Q G+
Sbjct: 223 HAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDA 282
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
H+ L ++R M K + + T+ VL A ++ + G+ VH + V +G + V V AL
Sbjct: 283 HEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATAL 342
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K C EA+ +F M +KD+ +W +++ Q +L +F ML PD
Sbjct: 343 VDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDA 402
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T VL ACS +HGY+V NG N F+ AL+D+Y+KCG +
Sbjct: 403 ITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNA--------FVAAALLDLYSKCGDID 454
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A VF ++KD+ W MI GYG G G+EA+ ++ M + ++P+ VTFV VLSACS
Sbjct: 455 SAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACS 514
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG + +G + M +GVVP EH + ++D+LGRAG+L EA M A W
Sbjct: 515 HSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTW 574
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LLAA R H NT ++++AA+ + +L+P H G Y L++NIY K+E V D R +R +
Sbjct: 575 CALLAACREHNNTKMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGR 634
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
++RK PG S +E+ + +HTFI+ +R+H + +I L L+ +LR DC
Sbjct: 635 DLRKVPGYSSVEVGNLVHTFIAGERTHQDWDNICTLLCDLSRKLRGE-DC 683
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 214/426 (50%), Gaps = 13/426 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
T T ++++ A +++KGQ H+Y++R + + ++++ Y K + ++ +
Sbjct: 198 LTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRL 257
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F ++ + +V T++ MI G+ + A +GL + M + V P+ T +++ C V+
Sbjct: 258 FEGMT-DRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVD 316
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
E K++H + +G +L+V + +ALV+ Y+KC EEA+ +F +P +DVV W A++ G
Sbjct: 317 AEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGG 376
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Q ++L VF+ M + T+ VL+A G + +HG +V+ G+++
Sbjct: 377 LTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNN 436
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V AL+D+Y K + A+ +FE EKDI W S++ + G + L+ RM++
Sbjct: 437 AFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIA 496
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV-VNGLAKNGSCKDIDDVFMNNALMDM 388
+ QP+ VTF +VL ACSH + G QI + V G+ N +A++D+
Sbjct: 497 SSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAE--------HQSAMVDL 548
Query: 389 YTKCGSMRDAQMVFTKMSKKDVA-SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+ G +++A M + VA +W ++ K + + KL PD V
Sbjct: 549 LGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTK--MSKVAAKSLLKLDPDHVG 606
Query: 448 FVGVLS 453
+ +L+
Sbjct: 607 YYNLLT 612
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 201/408 (49%), Gaps = 22/408 (5%)
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFM 185
+L V D +TF L++ C + ++ + +H + + D ++ +A+V Y +C M
Sbjct: 90 RLRVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDM 149
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF-RRMSKEGIWMSRFTVTGVLSA 244
A+ + L D+VL ++V GY Q G +ALE F R + +G+ ++ T+ +SA
Sbjct: 150 VGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSA 209
Query: 245 LIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+G + G+ H VV+ +GYD + ++N ++ Y K ++ +FE M ++D+
Sbjct: 210 AAQLGHVRKGQACHAYVVRNSLGYD--LALVNTVLSFYVKIGDFQASMRLFEGMTDRDVI 267
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+W+ ++ + Q G+ LR++ M+ A QP+ VT +VL AC+ + G+++H
Sbjct: 268 TWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVA 327
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
V G C+ +V + AL+DMY KC +A +F +M KKDV +W +I G
Sbjct: 328 VSIG------CE--LEVGVATALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQ 379
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES---RYGVVP 479
+ E+L +F CM PD +T V VL+ACS G G + R G
Sbjct: 380 NELPGESLHVFKCMLLDDHVPDAITMVKVLAACSEFG----GTRLAICLHGYLVRNGFNN 435
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++D+ + G ++ A + E + VVW +++A HG
Sbjct: 436 NAFVAAALLDLYSKCGDIDSAVRV-FEGTTEKDIVVWGSMIAGYGAHG 482
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 324/596 (54%), Gaps = 26/596 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEP 97
LQ C +L++G+ +H+ ++ +G + + + LI MYS C + AL +F +
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-RR 85
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++ ++SG N L F MR+ GV P ++ + + A L ++H
Sbjct: 86 NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLH 145
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ +LG D ++++ S L + Y KC + EA +VF+++P +D V W AM++GYA+ G
Sbjct: 146 CVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLE 205
Query: 218 KALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNG---RVVHGIVVKMGYDSGVPVM 273
A+ FR M +EG + + VLSA G K+G + +H V K G++ V V
Sbjct: 206 AAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVR 262
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWN-----SIMTVHEQCGNHDGTLRLFDRML 328
NALIDMY K V A + ++ D WN S++ + + + L ++ +
Sbjct: 263 NALIDMYAKSMDVESASRVLKI----DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 318
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +P+ TFS+++ C+ A L G Q+H ++ L I D F+ + L+DM
Sbjct: 319 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL--------IRDSFVGSTLVDM 370
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + + +F ++ + +WN +I + G G+EA+ F M + ++P+ + F
Sbjct: 371 YGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAF 430
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +L+ACSH+G + +G ++ M+ +G+ P EHY+C+ID GRAG+L+EAY+ MP
Sbjct: 431 VSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP 490
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ N W +LL A R+ G+ +L E+AAQ + +LEPG+ G +V +S IY + G++E+V
Sbjct: 491 IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKA 550
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR ++K PG SW++ H F S D SHP+ K IY +L LT R++E G
Sbjct: 551 VRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEG 606
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 320/586 (54%), Gaps = 35/586 (5%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCC----QMKYALFVFNNLSCEPNVFT---YNA 104
++IH +L + I + + L + +CC Q +YA L C+ + +++
Sbjct: 18 KQIHCLLLTSPIFYTRRDLF-LSRLLRRCCTAATQFRYA----RRLLCQLQTLSIQLWDS 72
Query: 105 MISGFYSNDFAFKGLDF--FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-----KIH 157
+I F + L F + HMR+ GV+P ++TFP L+K AV +++ + H
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLK------AVFKLRDSNPFQFH 126
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GLD D ++ ++L++ Y + A ++F+ +DVV W AM++G+ + G
Sbjct: 127 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+A+ F M K G+ + TV VL A + + GR VHG+ ++ G V + ++L
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK C +A ++F+ M +++ +W +++ + Q D + +F+ ML + P+
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S+VL AC+H+ AL GR++H Y++ N + N + L+D+Y KCG +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA--------GTTLIDLYVKCGCLE 358
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A +VF ++ +K+V +W MI G+ G ++A D+F M + + P+EVTF+ VLSAC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +GR M+ R+ + P +HY C++D+ GR G L EA L MP E VVW
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L + LH + +L + AA RV +L+P H G Y L++N+Y ++EV +R M+ Q
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHP-EAKSIYAELHSLTARLR 621
V K+PG SWIE+K L FI+ D P E+ +Y L ++ ++R
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CAH L +G+ +H YM++ I + + T+LI++Y KC ++ A+ VF L
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV+T+ AMI+GF ++ +A D F M V P++ TF ++ C V E
Sbjct: 368 H-EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 154 KKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
+++ + F + D Y + +V+ + + +EEA + E +P+ V+W A+
Sbjct: 427 RRLFLSMKGRFNMEPKADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 282/494 (57%), Gaps = 14/494 (2%)
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V ++++H V G D+ I + L+ TY + + +++A +F+ L +RD W+ MV G
Sbjct: 16 VFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGG 75
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+A+ G+ FR + + G+ +T+ V+ + GRV+H +V+K G S
Sbjct: 76 FAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSD 135
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+DMY K V +A +FE M KD+ +W ++ + C ++ +L LFDRM
Sbjct: 136 HFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMRE 194
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G PD V TV+ AC+ L A+ R + YIV NG + DV + A++DMY
Sbjct: 195 EGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSL--------DVILGTAMIDMY 246
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ A+ VF +M +K+V SW+ MI YG G+GK+A+D+F M + P+ VTFV
Sbjct: 247 AKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFV 306
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L ACSH+G + +G F M + V P ++HYTC++D+LGRAG+L+EA L AM
Sbjct: 307 SLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTV 366
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + +W LL A R+H +LAE AA + +L+P + G+YVL+SNIY GK+E+V
Sbjct: 367 EKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKF 426
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAG 629
R M Q+ ++K PG +WIE+ + + F DRSHP++K IY L SL +L AG
Sbjct: 427 RDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLE-----MAG 481
Query: 630 TLFDSDSTASGFEK 643
+ D+D E+
Sbjct: 482 YVPDTDFVLQDVEE 495
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 194/385 (50%), Gaps = 13/385 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+CI L C N+ +++H++++ G + + L+ Y++ + A +F+ L
Sbjct: 5 SCIDLLLRC---RNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL 61
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T++ M+ GF F + + GV PD YT P +I+ C D +
Sbjct: 62 TMRDSK-TWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIG 120
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH +V K GL D ++ ++LV+ Y KC +E+A ++FE + +D+V W M+ YA
Sbjct: 121 RVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADC 180
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ ++L +F RM +EG+ + + V++A +G R + +V+ G+ V +
Sbjct: 181 NAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG 239
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
A+IDMY K V A E+F+ M+EK++ SW++++ + G + LF MLS
Sbjct: 240 TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL 299
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ VTF ++L ACSH + G + N + + + + DV ++D+ + G
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRF-----FNSMWEEHAVR--PDVKHYTCMVDLLGRAG 352
Query: 394 SMRDAQMVFTKMS-KKDVASWNIMI 417
+ +A + M+ +KD W+ ++
Sbjct: 353 RLDEALRLIEAMTVEKDERLWSALL 377
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/576 (33%), Positives = 322/576 (55%), Gaps = 14/576 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H +++ G + +SL++MY+KC +++ A F + EPN ++NA+I+GF
Sbjct: 66 GEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEI-LEPNSVSWNALIAGFV 124
Query: 111 SNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
M + V D TF L+ D M +K++H V KLGL+ ++
Sbjct: 125 QVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEHEI 184
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
I +A++++Y C + +A +VF+ L +D++ WN+M+ G ++ + A E+F M +
Sbjct: 185 TICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMHR 244
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
I +T TG++SA G+ +HG+V+K G + V NALI MY + +
Sbjct: 245 NWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVM 304
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+AL +FE ++ KD+ SWNSIMT Q G + ++ F + S+ + D FS VL +C
Sbjct: 305 KDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSC 364
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S LA L G+Q H + N F+ ++L+ MY+KCG + +A+ F ++S
Sbjct: 365 SDLATLQLGQQTHALATKSSFESNE--------FVTSSLILMYSKCGVIENARKCFEQIS 416
Query: 407 KK-DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K + +WN MILGY G G+ +LD+FS MC +K D VTF +L+ACSH+G + +G
Sbjct: 417 SKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 476
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L ME Y + P +EHY +D+LGRAG +N+ EL +MP +P+V +T L R
Sbjct: 477 ELLNSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRA 536
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
G ++A A + ++EP YV +S++Y K+EE +++ M+++ V+K PG S
Sbjct: 537 CGEIEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWS 596
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
WIE+++ ++ F + DRSH +K IY + LT ++
Sbjct: 597 WIEIRNQVNAFNAEDRSHSLSKEIYLMIEDLTQEMQ 632
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 150/307 (48%), Gaps = 19/307 (6%)
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+++F+E+P RD V WN M++GY G+ + +F M + G ++ ++ + +L +
Sbjct: 1 MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
F G VHG+VVK GY+ V V ++L+DMY K + V +A F + E + SWN+++
Sbjct: 61 KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120
Query: 309 TVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
Q + L M + A D TF+ +L +Q+H ++ GL
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQG 426
++ + NA++ Y CG + DA+ VF + KD+ SWN MI G Q
Sbjct: 181 EH--------EITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQK 232
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV--PTIEHY 484
+ A ++F+ M ++ D T+ G++SACS G E +S +G+V +E
Sbjct: 233 ESAFELFTEMHRNWIETDIYTYTGIVSACS-------GEEHQSFGKSLHGLVIKKGLEQV 285
Query: 485 TCVIDML 491
T V + L
Sbjct: 286 TSVSNAL 292
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F + SS + ++ F+ A L+ C+ LQ GQ+ H+ ++ + +SLI
Sbjct: 342 FRYLRSSNIEVDDYAFS-----AVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLI 396
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MYSKC ++ A F +S + N +NAMI G+ + LD F+ M V D
Sbjct: 397 LMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDH 456
Query: 135 YTFPCLIKCCCD---VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
TF ++ C + LE+ V+K+ ++ Y +A V+ + + + ++
Sbjct: 457 VTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHY--AAAVDLLGRAGLVNKVKEL 514
Query: 192 FEELPL 197
E +PL
Sbjct: 515 IESMPL 520
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 332/620 (53%), Gaps = 44/620 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L+ G+ +H+ +++ + S + +YSKC ++ A VF++ + + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH-THDCN 73
Query: 99 VFTYNAMISGFYSNDF--------------------------AFKG-----LDFFNHMRQ 127
VF++N +IS + + A +G F MR+
Sbjct: 74 VFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMRE 133
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ D +T +I C + V ++++H L GLD V +G+AL+ +Y K F++E
Sbjct: 134 AFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191
Query: 188 ALKVFEELPL-RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A ++F L RD V WN+MV Y Q E KALE++ M+ G+ + FT+ VL+A
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFT 251
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWN 305
+ G H ++K GY V + LID+Y K G C+ + ++F+ + D+ WN
Sbjct: 252 NVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWN 311
Query: 306 SIMTVHEQCGN-HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
++++ + + D L F ++ G +PD + V+ ACS++++ GRQ+HG +
Sbjct: 312 TMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALK 371
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ N + +NNAL+ MY+KCG++RDA+ +F M + + S+N MI GY G
Sbjct: 372 LDIPSN-------RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
G ++L +F M E P +TF+ VL+AC+H+G + G+ + +M+ ++G+ P H+
Sbjct: 425 MGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
+C+ID+LGRAG+L+EA L +P + W LL A R+HGN +LA AA R+ QL+P
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDP 544
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ YV+++NIY G+ ++ +R MR + V+K PGCSWIE+ +H F++ D HP
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604
Query: 605 EAKSIYAELHSLTARLREHG 624
K I L + ++++ G
Sbjct: 605 MIKKIQEYLEEMMRKIKKVG 624
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 95/196 (48%), Gaps = 4/196 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
+ + + C++ ++ +G+++H L+ I + +S+ +LI MYSKC ++ A +F+
Sbjct: 345 SLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDT 404
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E N +YN+MI+G+ + F+ L F M ++ P TF ++ C V +
Sbjct: 405 MP-EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVED 463
Query: 153 VKKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNGY 210
K ++ K G++ + S +++ + + EA ++ E +P W+A++
Sbjct: 464 GKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGAC 523
Query: 211 AQIGEFHKALEVFRRM 226
G A++ R+
Sbjct: 524 RIHGNVELAIKAANRL 539
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 314/577 (54%), Gaps = 13/577 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM-KYALFVFNNLSCEPNVFTYNAM 105
NL+ ++IH+ ++ +G++ + ++ ++ + YA + F +N++
Sbjct: 17 NLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRLGSFPFNSL 76
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I+G+ +F + + M + G +PD +TFP L+K C + E +++HG+V KLGL
Sbjct: 77 INGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGL 136
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D Y+ ++L+ Y C A KVF+E+ +RDVV WN++++G+ + G F +A+ VF R
Sbjct: 137 LADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVFFR 196
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M E S T+ VL+A G G+ +HG V++ + + + NA++DMY K C
Sbjct: 197 MDVEP---SMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGC 252
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
EA IF+ + +DI SW ++T Q + +L LF M + G PD + ++VL A
Sbjct: 253 FYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSA 312
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ L L G +H YI G+ D+ + A++DMY KCG + A +F M
Sbjct: 313 CASLGTLDFGTWVHEYINQRGIKW--------DIHIGTAIVDMYAKCGCIEMALKIFYSM 364
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
S+++ +WN ++ G M G EAL++F M + +KP+E+TF+ +L+AC H G + +GR
Sbjct: 365 SQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGR 424
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++ M Y ++P +EHY C+ID+ RAG L EA ELA MP + + ++W LL A
Sbjct: 425 KYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTT 484
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
GN +L+ + +L+ G +VL+SNI ++ V +R M+ + VRK PG S
Sbjct: 485 VGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSS 544
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
IE+ H F+ D SH + + IY L+ + + E
Sbjct: 545 VIEVDGKAHEFVVGDISHLQTEEIYKVLNLINSVYHE 581
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 187/385 (48%), Gaps = 23/385 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C++ + ++G+++H +++ G++ SLI Y C A VF+ + +
Sbjct: 112 LKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVR-D 170
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++ISGF + + F M V P T ++ C + K IHG
Sbjct: 171 VVSWNSLISGFMKAGHFDEAISVFFRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHG 227
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
++ + +++ +G+A+++ Y+K EA +F+ELP RD+V W M+ G Q +
Sbjct: 228 VIER-RFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQ 286
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+LE+F M GI +T VLSA +G G VH + + G + + A++D
Sbjct: 287 SLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVD 346
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ AL+IF M +++ F+WN+++ G L LF+ M+ +G +P+ +T
Sbjct: 347 MYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEIT 406
Query: 339 FSTVLPACSHLAALMHGRQIHG-----YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
F +L AC H + GR+ Y ++ L G ++D++ + G
Sbjct: 407 FLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYG------------CMIDLFCRAG 454
Query: 394 SMRDA-QMVFTKMSKKDVASWNIMI 417
+ +A ++ T K DV W +++
Sbjct: 455 LLEEAVELARTMPMKPDVLIWGLLL 479
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 149/302 (49%), Gaps = 8/302 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
++ T ++ L CA +L G+ IH + R ++ L ++++MY K A +F
Sbjct: 202 SMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLG-NAMLDMYVKNGCFYEAKNIF 260
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ L ++ ++ MI+G +D + L+ F+ MR LG+ PD ++ C + +
Sbjct: 261 DELPTR-DIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTL 319
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+H + + G+ D++IG+A+V+ Y KC +E ALK+F + R+ WNA++ G
Sbjct: 320 DFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGL 379
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A G H+AL +F M G+ + T +L+A G GR + K+ Y+ +
Sbjct: 380 AMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKL-YNL-L 437
Query: 271 PVMN---ALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDR 326
P + +ID++ + + EA+E+ M K D+ W ++ GN + + R+ D
Sbjct: 438 PKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDY 497
Query: 327 ML 328
+L
Sbjct: 498 IL 499
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
Y D + + + ++ G+ D T+ LIKCC AV E I ++ G +
Sbjct: 38 YQRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ + L+N Y+K + +A ++F+++P R+V+ W M++ Y++ KALE+ M ++
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
+ + +T + VL + M + R++H ++K G +S V V +ALID++ K +A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
L +F+ M D WNSI+ Q D L LF RM AGF + T ++VL AC+ L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A L G Q H +IV K D+ +NNAL+DMY KCGS+ DA VF +M ++D
Sbjct: 274 ALLELGMQAHVHIV----------KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V +W+ MI G +G +EAL +F M + KP+ +T VGVL ACSH+G L G +
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M+ YG+ P EHY C+ID+LG+AG+L++A +L M E + V WRTLL A R+ N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LAE AA++V L+P G Y L+SNIY K++ V +IR MR + ++K PGCSWIE+
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+H FI D SHP+ + +L+ L RL
Sbjct: 504 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 198/390 (50%), Gaps = 22/390 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ C + +G I ++ G + LINMY K + A +F+
Sbjct: 62 ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV ++ MIS + K L+ M + V P+ YT+ +++ C + +
Sbjct: 122 MP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSD 177
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V+ +H + K GL+ DV++ SAL++ + K E+AL VF+E+ D ++WN+++ G+AQ
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
ALE+F+RM + G + T+T VL A + + G H +VK YD + +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 295
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY K + +AL +F M+E+D+ +W+++++ Q G L+LF+RM S+G
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 333 QPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P+ +T VL ACSH L G R + ++ + ++ C ++D+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC-----------MIDL 404
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
K G + DA + +M + D +W ++
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 281/485 (57%), Gaps = 9/485 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
Y F ++ + V ++IHG+ K GL V + +ALV Y KC+ + EA K+F+
Sbjct: 211 YVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 270
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
R+ + W+AMV GY+Q GE +A+++F RM GI S +T+ GVL+A + + G
Sbjct: 271 SGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEG 330
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +H ++K+G++ + AL+DMY K C+ +A + F+ ++E+D+ W S+++ + Q
Sbjct: 331 KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQN 390
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+++ L L+ RM +AG P+ T ++VL ACS LA L G+Q+HG+ + +G
Sbjct: 391 SDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGL----- 445
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+V + +AL MYTKCGS+ D +VF + KDV SWN MI G +GQG EAL++F
Sbjct: 446 ---EVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 502
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M +PD+VTFV ++SACSH GF+ +G + +M ++G+ P ++HY C++D+L RA
Sbjct: 503 EMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRA 562
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
GQL E E + + +WR LL+A + HGN +L A +++ L YV ++
Sbjct: 563 GQLKETKEFIESASIDHGLCLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLA 622
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
IY A G+ +V + MR V K GCSWI LK+ H F+ D HP + +L
Sbjct: 623 GIYTALGRMRDVERVWKLMRTNGVSKEVGCSWIALKNQWHVFVVGDTMHPRIEET-KDLV 681
Query: 615 SLTAR 619
SL +R
Sbjct: 682 SLVSR 686
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 251/515 (48%), Gaps = 30/515 (5%)
Query: 24 QTFNHPFT-LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
QT +PF+ +T + +L + NL G+ +H+ ++RTG L+N Y+KC Q
Sbjct: 7 QTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQ 66
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPC 139
+ A +FN + C+ +V ++N++I+G+ N + + F MR +LP+ YT
Sbjct: 67 LAKAHSIFNAIICK-DVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAG 125
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC--QFMEEALKVFEELPL 197
+ K + + ++ H LV K+ D+Y+ ++LV Y K +++ F
Sbjct: 126 IFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYYGFWLCYK 185
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
+DV+ + ++ KE S + T VLS+L + GR +
Sbjct: 186 KDVLR-----------RQLKSSICFLEEKEKESD--SDYVFTAVLSSLAATVYVGLGRQI 232
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
HGI VK G V + NAL+ MY K + + EA ++F+ +++ +W++++T + Q G
Sbjct: 233 HGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 292
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
++LF RM SAG +P T VL ACS + L+ G+Q+H +++ G ++
Sbjct: 293 LEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERH------- 345
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+F AL+DMY K G + DA+ F + ++DVA W +I GY + +EAL ++ M
Sbjct: 346 -LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 404
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
A + P++ T VL ACS L G++ + ++G + + + M + G L
Sbjct: 405 TAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYTKCGSL 463
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + PN+ + V W +++ +G D A
Sbjct: 464 EDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEA 497
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 222/476 (46%), Gaps = 77/476 (16%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G++IH ++ G++ +L+ MYSKC + A +F++ S + N T++AM++G+
Sbjct: 229 GRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMVTGYS 287
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + + + F+ M G+ P +YT ++ C D+ ++E K++H + KLG + ++
Sbjct: 288 QNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLF 347
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ALV+ Y K + +A K F+ L RDV LW ++++GY Q + +AL ++RRM G
Sbjct: 348 ATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAG 407
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I + T+ VL A + + G+ VHG +K G+ VP+ +AL MY K + +
Sbjct: 408 IIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGN 467
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F KD+ SWN++++ G D L LF+ ML+ G +PD VTF ++ ACSH
Sbjct: 468 LVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKG 527
Query: 351 ALMHG---------------RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD-------- 387
+ G + H +V+ L++ G K+ + F+ +A +D
Sbjct: 528 FVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKE-FIESASIDHGLCLWRI 586
Query: 388 -------------------------------------MYTKCGSMRDAQMVFTKMSKKDV 410
+YT G MRD + V+ M V
Sbjct: 587 LLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRTNGV 646
Query: 411 A------------SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ W++ ++G M + +E D+ S + L E FV VL++
Sbjct: 647 SKEVGCSWIALKNQWHVFVVGDTMHPRIEETKDLVSLVSRQML---EEGFVTVLNS 699
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 190/394 (48%), Gaps = 34/394 (8%)
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ- 212
+ +H + + G + LVN Y KC + +A +F + +DVV WN+++ GY+Q
Sbjct: 36 RAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQN 95
Query: 213 --IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
I H +++FR M + I + +T+ G+ A + GR H +VVKM +
Sbjct: 96 GGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDI 155
Query: 271 PVMNALIDMYGKG--KCVGEALEIFEMMEEKDIFSW---NSIMTVHEQCGNHDGTLRLFD 325
V +L+ MY K K + F + +KD+ +SI + E+ D
Sbjct: 156 YVDTSLVGMYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESD------- 208
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
D V F+ VL + + + GRQIHG V NGL + V ++NAL
Sbjct: 209 --------SDYV-FTAVLSSLAATVYVGLGRQIHGITVKNGL--------LGFVALSNAL 251
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY+KC S+ +A +F ++ +W+ M+ GY +G+ EA+ +FS M A +KP E
Sbjct: 252 VTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSE 311
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
T VGVL+ACS +L +G++ + + G + T ++DM +AG L +A +
Sbjct: 312 YTIVGVLNACSDICYLVEGKQLHSFL-LKLGFERHLFATTALVDMYAKAGCLADARK-GF 369
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
E + +W +L++ + + + A I +R+
Sbjct: 370 DCLQERDVALWTSLISGYVQNSDNEEALILYRRM 403
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 336/633 (53%), Gaps = 29/633 (4%)
Query: 27 NHPFTLATCIASLQLCAH----QTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKC 80
HP T T ++ L+ +H ++ G+E H++ L+ G++ + +L++MY++
Sbjct: 157 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 216
Query: 81 CQMKYALFVFNNLSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
+ A +F + +V T+N M+S + + + M LGV PD TF
Sbjct: 217 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 276
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELP-- 196
+ C + + +++H V K L + ++ SALV+ Y + + +A +VF+ +P
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 336
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGR 255
+ + +WNAM+ GYAQ G +AL +F RM E G T+ VL A F
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 396
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHE 312
VHG VVK G V NAL+DMY + A IF M++ D+ SWN+++T V
Sbjct: 397 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 456
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ R ++ G P+ +T T+LP C+ LAA G++IHGY V + L
Sbjct: 457 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT--- 513
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DV + +AL+DMY KCG + ++ VF ++ +++ +WN++I+ YGM G G EA +
Sbjct: 514 -----DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568
Query: 433 FSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M + +P+EVTF+ L+ACSHSG + +G + ME +GV PT + CV+D+L
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628
Query: 492 GRAGQLNEAYELALAM-PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
GRAG+L+EAY + +M E W T+L A RLH N L EIA +R+ +LEP +Y
Sbjct: 629 GRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+ NIY A G++ ++R MR++ V K PGCSWIE+ +H F++ + +HP ++ ++
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748
Query: 611 AELHSLTARLREHG-----DCCAGTLFDSDSTA 638
A + +L + G C + D D A
Sbjct: 749 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 252 KNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK--DIFSWNSI 307
++ R +H ++ G + V NAL+ Y + + ALE+F + + D S+NS+
Sbjct: 74 RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL----AALMHGRQIHGYIV 363
++ D L ML+ G T +VL A SHL AA+ GR+ H + +
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS--KKDVASWNIMILGYG 421
NGL F NAL+ MY + G + DAQ +F + + DV +WN M+
Sbjct: 194 KNGLLHG------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 247
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
G EA+ M ++PD VTF L ACS L GRE
Sbjct: 248 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 109/309 (35%), Gaps = 65/309 (21%)
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ---IHGYIVVNGLAKNG 371
GNH LR + A Q L S + PA AAL R IH + GL
Sbjct: 34 GNHAAALRALSSITMASPQQQL-DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRP 92
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEA 429
S + NAL+ Y +CG + A VF +S D S+N +I + + A
Sbjct: 93 SPA------VANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 146
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSH----SGFLSQGREFLPLMESRYGVVPTIEHYT 485
L M T V VL A SH + + GRE + G++ + +
Sbjct: 147 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAF-ALKNGLLHGHQRFA 205
Query: 486 --CVIDMLGRAGQLNEAYEL-ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
++ M R G + +A L A A P + V W T
Sbjct: 206 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT------------------------ 241
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN--------PGCSWIELKD--- 591
M ++ V G ++E + + M VR + P CS +EL D
Sbjct: 242 ----------MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGR 291
Query: 592 GLHTFISSD 600
+H ++ D
Sbjct: 292 EMHAYVIKD 300
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 329/587 (56%), Gaps = 20/587 (3%)
Query: 47 NLQKGQEIHSYMLRTG--IIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA 104
+ + +H +++ G ++ ++S I MY++ +++A VF+N E N +N
Sbjct: 225 DFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN-CLERNTEVWNT 283
Query: 105 MISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
MIS F N+F+ +G+ FF + D+ T I + +++H V K
Sbjct: 284 MISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKN 343
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
V + +AL+ Y +C ++ + K+F+ +P +DVV WN M++ + Q G +AL +F
Sbjct: 344 VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLF 403
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVPVMNALIDMYGK 282
M K+ + + TVT +LSA + G+ HG +++ G G+ + LIDMY K
Sbjct: 404 YEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD--SYLIDMYAK 461
Query: 283 GKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ A +FE E+D +WNS+M+ + Q G D + +ML P++VT +
Sbjct: 462 SGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLA 521
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
++LPAC+ + G+Q+HG+ + N L +N VF+ AL+DMY+K GS+ A+
Sbjct: 522 SILPACNPSGYIDWGKQLHGFSIRNDLDQN--------VFVATALIDMYSKSGSIAHAEN 573
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF+K ++K + +++ MILGYG G G+ AL MF M ++ ++PD VT V VLSACS++G
Sbjct: 574 VFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGL 633
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTL 519
+ +G + M + Y + P+ EH+ CV DMLGRAG++++AYE + + + N + +W +L
Sbjct: 634 VDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSL 693
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEP--GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
LAA R+H +L ++ A+++ ++E G G +VL+SNIY +E V +R MR++
Sbjct: 694 LAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERG 753
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K G SWIE+ ++ F S DR HP++ IY+ L L ++ G
Sbjct: 754 LKKETGSSWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAG 800
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 153/558 (27%), Positives = 266/558 (47%), Gaps = 37/558 (6%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC---------------CQM 83
L+ CA NL G+ +H++ LR + S + SL+NMYS C C +
Sbjct: 103 LKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDL 162
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+F + + V +N +I+ + + + + F+ M ++G+ P +F +
Sbjct: 163 VRKVF---DTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 219
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
+ +HG++ KLG + D+Y+ S+ + Y + +E A KVF+ R+
Sbjct: 220 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 279
Query: 202 LWNAMVNGYAQIGEFHKALEV-FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
+WN M++ + Q + +++ F+ + E + T+ +SA + F+ +H
Sbjct: 280 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAF 339
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
V+K + V VMNALI MY + + + +IF+ M EKD+ SWN++++ Q G +D
Sbjct: 340 VIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEA 399
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M D VT + +L A S L G+Q HGY++ NG+ G
Sbjct: 400 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG--------- 450
Query: 381 MNNALMDMYTKCGSMRDAQMVFTK--MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
M++ L+DMY K G + AQ VF K ++D A+WN M+ GY +G +A + M +
Sbjct: 451 MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLD 510
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
K+ P+ VT +L AC+ SG++ G++ L R + + T +IDM ++G +
Sbjct: 511 QKVMPNVVTLASILPACNPSGYIDWGKQ-LHGFSIRNDLDQNVFVATALIDMYSKSGSIA 569
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNI 556
A E + NE + V + T++ HG + A R+ + ++P ++S
Sbjct: 570 HA-ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC 628
Query: 557 YVAGGKYEEVLDIRHTMR 574
A G +E L I +MR
Sbjct: 629 SYA-GLVDEGLQIFESMR 645
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/539 (25%), Positives = 246/539 (45%), Gaps = 65/539 (12%)
Query: 78 SKCCQ---MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLP 132
S+ CQ + A +F+ L P+ +N +I G N+F + L F+++M+ V
Sbjct: 36 SRLCQEGQLHLARQLFDALP-RPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 94
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM------- 185
D YT+ ++K C D ++ K +H + ++ + ++L+N Y C
Sbjct: 95 DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 154
Query: 186 ------EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
+ KVF+ + R VV WN ++ Y + + +A++ F M K GI S +
Sbjct: 155 SGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 214
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
V A +G FKN VVHG++VK+G Y + + V+++ I MY + C+ A ++F+
Sbjct: 215 NVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCL 274
Query: 298 EKDIFSWNSIMTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
E++ WN++++ Q + +G F + S D VT + + A SHL
Sbjct: 275 ERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAE 334
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H +++ N + V + NAL+ MY++C S+ + +F M +KDV SWN M
Sbjct: 335 QLHAFVIKN--------VAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTM 386
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-----------HSGFLSQGR 465
I + +G EAL +F M + L D VT +LSA S H L G
Sbjct: 387 ISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGI 446
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL-ALAMPNEANPVVWRTLLAASR 524
+F ++ Y +IDM ++G + A + + +E + W ++++
Sbjct: 447 QF-----------EGMDSY--LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 493
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI--------YVAGGKYEEVLDIRHTMRQ 575
+G D A + +++ L+ N V +++I Y+ GK IR+ + Q
Sbjct: 494 QNGLVDQAFLILRQM--LDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQ 550
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 4/327 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++++ +H + +++H+++++ + + +LI MYS+C + + +F+N+
Sbjct: 316 TLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNM 375
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E +V ++N MIS F N + L F M++ ++ D T L+ D+
Sbjct: 376 P-EKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIG 434
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE--LPLRDVVLWNAMVNGYA 211
K+ HG + + G+ + + S L++ Y K +E A VFE+ RD WN+M++GY
Sbjct: 435 KQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYT 493
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G +A + R+M + + + T+ +L A G+ G+ +HG ++ D V
Sbjct: 494 QNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVF 553
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V ALIDMY K + A +F EK I ++++++ + Q G + L +F RM +G
Sbjct: 554 VATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSG 613
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQI 358
QPD VT VL ACS+ + G QI
Sbjct: 614 IQPDAVTLVAVLSACSYAGLVDEGLQI 640
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C + G+++H + +R + + T+LI+MYSK + +A VF+
Sbjct: 517 VVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFS 576
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+ E ++ TY+ MI G+ + L F+ M++ G+ PD T ++ C
Sbjct: 577 KAN-EKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSAC 628
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/610 (33%), Positives = 324/610 (53%), Gaps = 32/610 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG---------IID 65
F F +G+ H F L L + ++++ ++IH+ +++ II
Sbjct: 12 FQFIAPAGSSANFHEF------PQLLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIIS 65
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLS--CEPN-VFTYNAMISGFYSNDFAFKGL-DF 121
ITSL+ L+ ++L+ C N V+ +NA+I +++ F +
Sbjct: 66 LCTKITSLLQQDVHLADSIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSL 125
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ M +G+ PD YT P L+K C A +E +IH K GL ++++ + L+ Y
Sbjct: 126 YRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAV 185
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
F+E KVF++ P D++ W ++ Y+++G +A+ F RM+ R T+ V
Sbjct: 186 SGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVV 242
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
LSA +G F G+ + + +D S V + NAL+DMY K A ++F +M K
Sbjct: 243 LSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVK 302
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
++ SWNS+++ G L +F RM + G +PD VT VL +C++L L G+ +H
Sbjct: 303 NLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVH 362
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
YI N + +G ++ NAL+DMY KCGS+ A MVF M KDV S+ MI+G
Sbjct: 363 SYIDKNHMKADG--------YVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVG 414
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
+ M G+ AL +FS M ++PD VT VGVLSACSH+G L +GR M Y + P
Sbjct: 415 FAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQP 474
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
EHY C++D+LGRAG ++EA MP + VW +LL A ++H +L E Q++
Sbjct: 475 QTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKL 534
Query: 540 FQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS 599
++EP G Y+LMSNIY + ++ + L R M+Q N++K PGCS IE+ +H F
Sbjct: 535 IEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKG 594
Query: 600 DRSHPEAKSI 609
++SHP+++ +
Sbjct: 595 EKSHPKSREM 604
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 336/633 (53%), Gaps = 29/633 (4%)
Query: 27 NHPFTLATCIASLQLCAH----QTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKC 80
HP T T ++ L+ +H ++ G+E H++ L+ G++ + +L++MY++
Sbjct: 157 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 216
Query: 81 CQMKYALFVFNNLSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
+ A +F + +V T+N M+S + + + M LGV PD TF
Sbjct: 217 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 276
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELP-- 196
+ C + + +++H V K L + ++ SALV+ Y + + +A +VF+ +P
Sbjct: 277 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 336
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGR 255
+ + +WNAM+ GYAQ G +AL +F RM E G T+ VL A F
Sbjct: 337 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 396
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHE 312
VHG VVK G V NAL+DMY + A IF M++ D+ SWN+++T V
Sbjct: 397 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 456
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ R ++ G P+ +T T+LP C+ LAA G++IHGY V + L
Sbjct: 457 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT--- 513
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DV + +AL+DMY KCG + ++ VF ++ +++ +WN++I+ YGM G G EA +
Sbjct: 514 -----DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568
Query: 433 FSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M + +P+EVTF+ L+ACSHSG + +G + ME +GV PT + CV+D+L
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628
Query: 492 GRAGQLNEAYELALAMPN-EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
GRAG+L+EAY + +M E W T+L A RLH N L EIA +R+ +LEP +Y
Sbjct: 629 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+ NIY A G++ ++R MR++ V K PGCSWIE+ +H F++ + +HP ++ ++
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748
Query: 611 AELHSLTARLREHG-----DCCAGTLFDSDSTA 638
A + +L + G C + D D A
Sbjct: 749 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 781
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 252 KNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK--DIFSWNSI 307
++ R +H ++ G + V NAL+ Y + + ALE+F + + D S+NS+
Sbjct: 74 RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 133
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL----AALMHGRQIHGYIV 363
++ D L ML+ G T +VL A SHL AA+ GR+ H + +
Sbjct: 134 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 193
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS--KKDVASWNIMILGYG 421
NGL F NAL+ MY + G + DAQ +F + + DV +WN M+
Sbjct: 194 KNGLLHG------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 247
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
G EA+ M ++PD VTF L ACS L GRE
Sbjct: 248 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 293
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 109/309 (35%), Gaps = 65/309 (21%)
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ---IHGYIVVNGLAKNG 371
GNH LR + A Q L S + PA AAL R IH + GL
Sbjct: 34 GNHAAALRALSSITMASPQQQL-DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRP 92
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEA 429
S + NAL+ Y +CG + A VF +S D S+N +I + + A
Sbjct: 93 SPA------VANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 146
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSH----SGFLSQGREFLPLMESRYGVVPTIEHYT 485
L M T V VL A SH + + GRE + G++ + +
Sbjct: 147 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAF-ALKNGLLHGHQRFA 205
Query: 486 --CVIDMLGRAGQLNEAYEL-ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
++ M R G + +A L A A P + V W T
Sbjct: 206 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT------------------------ 241
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN--------PGCSWIELKD--- 591
M ++ V G ++E + + M VR + P CS +EL D
Sbjct: 242 ----------MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGR 291
Query: 592 GLHTFISSD 600
+H ++ D
Sbjct: 292 EMHAYVIKD 300
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 321/595 (53%), Gaps = 26/595 (4%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
L G ++H G I + +L+ MY+K + A+ VF ++ E +V ++++MI
Sbjct: 414 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMI 472
Query: 107 SGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+GF N +F L +F +M LG V P+ TF + C A+ K+IH V + G+
Sbjct: 473 AGFCFNHRSFDALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI 530
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ Y+ +AL++ Y+KC A F +DVV WN M++G+ G AL +F +
Sbjct: 531 GSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQ 590
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M + R L+A +G G +H + G+ V V NAL++MY K K
Sbjct: 591 MMYTS--LGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 648
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD-----RMLSAGFQPDLVTFS 340
+ +A+E+F+ M EKD+ SW+S++ C NH R FD R + +P+ VTF
Sbjct: 649 IDKAIEVFKFMAEKDVVSWSSMIAGF--CFNH----RSFDALYYFRYMLGHVKPNSVTFI 702
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
L AC+ AL G++IH Y++ G+ G ++ NAL+D+Y KCG A
Sbjct: 703 AALSACAATGALRSGKEIHAYVLRCGIGSEG--------YVPNALLDLYVKCGQTSYAWA 754
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
F+ S+KDV SWNIM+ G+ G G AL +F+ M E PDEVTFV ++ ACS +G
Sbjct: 755 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGM 813
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ QG E ++ +VP ++HY C++D+L R G+L EAY L MP + + VW LL
Sbjct: 814 VIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 873
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
R+H + +L E+AA+ + +LEP +VL+ ++Y GK+ +V +R TMR++ + +
Sbjct: 874 NGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQ 933
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
+ GCSW+E+K H F++ D SHP+ K I LH + R++ G +L D +
Sbjct: 934 DNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKE 988
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 248/488 (50%), Gaps = 24/488 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + + G+E+H+++LR G D + +L+ MY+KC + A VF+ ++ +
Sbjct: 204 LRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMT-D 262
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++NAMI+G + N GL+ F M + V P+ T + + V K++HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G +DV ++L+ Y M +A K+F + +D + W AM++GY + G K
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALEV+ M + T+ L+A +G G +H + G+ V V NAL++
Sbjct: 383 ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLE 442
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD-----RMLSAGFQ 333
MY K K + +A+E+F+ M EKD+ SW+S++ C NH R FD R + +
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGF--CFNH----RSFDALYYFRYMLGHVK 496
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P+ VTF L AC+ AL G++IH Y++ G+ G ++ NAL+D+Y KCG
Sbjct: 497 PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEG--------YVPNALLDLYVKCG 548
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
A F+ S+KDV SWNIM+ G+ G G AL +F+ M L + L+
Sbjct: 549 QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALA 606
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
AC+ G L G + L +++ G + + +++M ++ +++A E+ M E +
Sbjct: 607 ACACLGRLDVGIKLHELAQNK-GFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA-EKDV 664
Query: 514 VVWRTLLA 521
V W +++A
Sbjct: 665 VSWSSMIA 672
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 253/509 (49%), Gaps = 36/509 (7%)
Query: 36 IASLQLCAHQTNLQKG--------QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+A +LC + + G E S+ LR G ++++M + ++ +A
Sbjct: 100 VALFRLCEWRRAVDAGMRACARADAEHPSFGLRLG--------NAMLSMLVRFGEIWHAW 151
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + E +VF++N M+ G+ F + LD + M G+ PD YTFPC+++ C +
Sbjct: 152 RVFAKMP-ERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGI 210
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++H V + G +V + +ALV Y KC + A KVF+ + + D + WNAM+
Sbjct: 211 PDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMI 270
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+ + E LE+F M + + + T+T V A M+ + +HG VK G+
Sbjct: 271 AGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFA 330
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V N+LI MY +G+A +IF ME KD SW ++++ +E+ G D L ++ M
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
PD VT ++ L AC+ L L G ++H LA+N I V + NAL++
Sbjct: 391 ELHNVNPDDVTIASALAACACLGRLDVGIKLH------ELAQNKGF--IRYVVVANALLE 442
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K + A VF M++KDV SW+ MI G+ + + +AL F M +KP+ VT
Sbjct: 443 MYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVT 501
Query: 448 FVGVLSACSHSGFLSQGREF----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
F+ LSAC+ +G L G+E L G VP ++D+ + GQ + A+
Sbjct: 502 FIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWA- 555
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLA 532
++ +E + V W +L+ HG D+A
Sbjct: 556 QFSVHSEKDVVSWNIMLSGFVAHGLGDIA 584
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 336/633 (53%), Gaps = 29/633 (4%)
Query: 27 NHPFTLATCIASLQLCAH----QTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKC 80
HP T T ++ L+ +H ++ G+E H++ L+ G++ + +L++MY++
Sbjct: 159 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 218
Query: 81 CQMKYALFVFNNLSC-EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
+ A +F + +V T+N M+S + + + M LGV PD TF
Sbjct: 219 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 278
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELP-- 196
+ C + + +++H V K L + ++ SALV+ Y + + +A +VF+ +P
Sbjct: 279 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 338
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGR 255
+ + +WNAM+ GYAQ G +AL +F RM E G T+ VL A F
Sbjct: 339 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 398
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHE 312
VHG VVK G V NAL+DMY + A IF M++ D+ SWN+++T V
Sbjct: 399 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 458
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ R ++ G P+ +T T+LP C+ LAA G++IHGY V + L
Sbjct: 459 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT--- 515
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DV + +AL+DMY KCG + ++ VF ++ +++ +WN++I+ YGM G G EA +
Sbjct: 516 -----DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 570
Query: 433 FSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M + +P+EVTF+ L+ACSHSG + +G + ME +GV PT + CV+D+L
Sbjct: 571 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 630
Query: 492 GRAGQLNEAYELALAMPN-EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
GRAG+L+EAY + +M E W T+L A RLH N L EIA +R+ +LEP +Y
Sbjct: 631 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 690
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+ NIY A G++ ++R MR++ V K PGCSWIE+ +H F++ + +HP ++ ++
Sbjct: 691 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 750
Query: 611 AELHSLTARLREHG-----DCCAGTLFDSDSTA 638
A + +L + G C + D D A
Sbjct: 751 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 783
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 252 KNGRVVHGIVVKMG--YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK--DIFSWNSI 307
++ R +H ++ G + V NAL+ Y + + ALE+F + + D S+NS+
Sbjct: 76 RSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSL 135
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL----AALMHGRQIHGYIV 363
++ D L ML+ G T +VL A SHL AA+ GR+ H + +
Sbjct: 136 ISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFAL 195
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS--KKDVASWNIMILGYG 421
NGL F NAL+ MY + G + DAQ +F + + DV +WN M+
Sbjct: 196 KNGLLHG------HQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 249
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
G EA+ M ++PD VTF L ACS L GRE
Sbjct: 250 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREM 295
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 109/309 (35%), Gaps = 65/309 (21%)
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ---IHGYIVVNGLAKNG 371
GNH LR + A Q L S + PA AAL R IH + GL
Sbjct: 36 GNHAAALRALSSITMASPQQQL-DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRP 94
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEA 429
S + NAL+ Y +CG + A VF +S D S+N +I + + A
Sbjct: 95 SPA------VANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHA 148
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSH----SGFLSQGREFLPLMESRYGVVPTIEHYT 485
L M T V VL A SH + + GRE + G++ + +
Sbjct: 149 LAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAF-ALKNGLLHGHQRFA 207
Query: 486 --CVIDMLGRAGQLNEAYEL-ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
++ M R G + +A L A A P + V W T
Sbjct: 208 FNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNT------------------------ 243
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN--------PGCSWIELKD--- 591
M ++ V G ++E + + M VR + P CS +EL D
Sbjct: 244 ----------MVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGR 293
Query: 592 GLHTFISSD 600
+H ++ D
Sbjct: 294 EMHAYVIKD 302
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
Y D + + + ++ G+ D T+ LIKCC AV E I ++ G +
Sbjct: 38 YQRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ + L+N Y+K + +A ++F+++P R+V+ W M++ Y++ KALE+ M ++
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
+ + +T + VL + M + R++H ++K G +S V V +ALID++ K +A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
L +F+ M D WNSI+ Q D L LF RM AGF + T ++VL AC+ L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A L G Q H +IV K D+ +NNAL+DMY KCGS+ DA VF +M ++D
Sbjct: 274 ALLELGMQAHVHIV----------KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V +W+ MI G +G +EAL +F M + KP+ +T VGVL ACSH+G L G +
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M+ YG+ P EHY C+ID+LG+AG+L++A +L M E + V WRTLL A R+ N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LAE AA++V L+P G Y L+SNIY K++ V +IR MR + ++K PGCSWIE+
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+H FI D SHP+ + +L+ L RL
Sbjct: 504 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 198/390 (50%), Gaps = 22/390 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ C + +G I ++ G + LINMY K + A +F+
Sbjct: 62 ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV ++ MIS + K L+ M + V P+ YT+ +++ C + +
Sbjct: 122 MP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSD 177
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V+ +H + K GL+ DV++ SAL++ + K E+AL VF+E+ D ++WN+++ G+AQ
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
ALE+F+RM + G + T+T VL A + + G H +VK YD + +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 295
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY K + +AL +F M+E+D+ +W+++++ Q G L+LF+RM S+G
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 333 QPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P+ +T VL ACSH L G R + ++ + ++ C ++D+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC-----------MIDL 404
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
K G + DA + +M + D +W ++
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 341/665 (51%), Gaps = 59/665 (8%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQL--CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
FS ++N F L S+ L C ++L G+++H +++ +G+++ ++ L+
Sbjct: 62 FSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLV 121
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVF---TYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
YS + A + L N+F ++N +I+ + + + + M GV
Sbjct: 122 MFYSSLEFLPEA----HTLVETSNLFRPCSWNILITSYVKHKLYEAAILAYKQMVSKGVR 177
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD +TFP ++K C + + ++H + +++ +AL++ Y +C ++ A +
Sbjct: 178 PDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNL 237
Query: 192 FEELPLRDVVLWNAMVNGYA-----------------------------------QIGEF 216
F+ + RD V WN+M++ Y+ ++G F
Sbjct: 238 FDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNF 297
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL++ +M GI + + L A +G + G+ +HG ++ + V NAL
Sbjct: 298 TQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNAL 357
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY + K + A +F + ++K +WNS+++ G + L LF +L G +PD
Sbjct: 358 VTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDY 417
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI-DDVFMNNALMDMYTKCGSM 395
VTF+++LP C+ +A L HGR+ H YI + +D D + + NAL+DMY + G +
Sbjct: 418 VTFASILPLCARVADLQHGREFHCYITKH--------RDFRDHLLLWNALVDMYARAGKV 469
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A+ +F +SKKD ++ +I GYGM G+G +A+ +F M ++KPD +T + VLSAC
Sbjct: 470 SEAKRIFYSLSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSAC 529
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SHSG ++Q M+S +G+ P +EHY C+ D+ GR G LN+A E+ MP +
Sbjct: 530 SHSGLVNQAELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAI 589
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W TL+ A +HGN D+ E AA+++ ++ P H G YVL++N+Y A G + ++ +IR MR
Sbjct: 590 WATLIGACCIHGNMDIGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRD 649
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
V K PGCSW+++ +F D S P+A L SL ++ G+L +D
Sbjct: 650 SGVAKIPGCSWVDVGSEFISFSVGDTSSPQALESKLLLDSLYDVMKH------GSLIMTD 703
Query: 636 STASG 640
S +G
Sbjct: 704 SYDTG 708
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 310/572 (54%), Gaps = 11/572 (1%)
Query: 54 IHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+H + L+ G++ S + + +L++ Y K + A VF + +V TYNAM+ G
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSV-TYNAMMMGCSKE 219
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ LD F MR+ G+ ++TF ++ V + +++HGLV + +V++
Sbjct: 220 GSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVN 278
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++L++ Y KC ++E K+F E+ RD V +N M+ GYA L +FR M
Sbjct: 279 NSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFD 338
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+LS + G+ +H +V +G S V NALIDMY K + A
Sbjct: 339 RQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTN 398
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F +K SW +++T Q G + L+LF M AG PD TFS+ + A S+LA +
Sbjct: 399 FINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMI 458
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQ+H Y++ +G + VF +AL+DMYTKCG + +A F +M +++ S
Sbjct: 459 GLGRQLHSYLIRSG--------HMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSIS 510
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I Y GQ K A+ MF M KPD VTF+ VLSACSH+G + ++ LME
Sbjct: 511 WNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELME 570
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
YG+ P EHY+CVID LGR G+ ++ E+ MP E +P++W ++L + R HGN DLA
Sbjct: 571 YEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLA 630
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
+AA+++F + YV++SNI+ GK+E+ ++ MR + +RK G SW+E+K
Sbjct: 631 RVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHK 690
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++F S+D+++P I EL L + + G
Sbjct: 691 VYSFSSNDQTNPMITEIKDELERLYKEMDKQG 722
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 25/369 (6%)
Query: 175 LVNTYLKCQFMEEALKVFEELP--LRDVVLWNAMVNGYAQI--GEFHKALEVFRRMSKEG 230
+++ Y + + A +F P LRD V W M+ +A A+ +FR M +EG
Sbjct: 72 MLSGYSRSGQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREG 131
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVV---HGIVVKMG-YDSGVPVMNALIDMYGKGKCV 286
+ R TV VL+ G ++ H +K+G S V V N L+D Y K +
Sbjct: 132 VAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLL 191
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A +F+ M +D ++N++M + G+H L LF M G TFSTVL
Sbjct: 192 AAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVA 251
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ + L GRQ+HG +V + N VF+NN+L+D Y+KC + + + +F +M
Sbjct: 252 TGVGDLCLGRQVHG-LVARATSSN--------VFVNNSLLDFYSKCDCLDEMKKLFHEMI 302
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS---ACSHSGFLSQ 463
++D S+N+MI GY + L +F M + + +LS + H G Q
Sbjct: 303 ERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQ 362
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
L L+ G+ +IDM + G L+ A + N+ V W ++
Sbjct: 363 IHAQLVLL----GLSSEDLVGNALIDMYSKCGMLDAA-KTNFINKNDKTGVSWTAMITGC 417
Query: 524 RLHGNTDLA 532
+G + A
Sbjct: 418 VQNGQQEEA 426
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 9/286 (3%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G++IH+ ++ G+ L +LI+MYSKC + A F N + + V ++ AMI+G
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGV-SWTAMITGCV 418
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + L F MR+ G+ PD+ TF IK ++ + +++H + + G V+
Sbjct: 419 QNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVF 478
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
GSAL++ Y KC ++EAL+ F+E+P R+ + WNA+++ YA G+ A+++F M G
Sbjct: 479 SGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG 538
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM----NALIDMYGKGKCV 286
T VLSA G + + M Y+ G+ + +ID G+
Sbjct: 539 FKPDSVTFLSVLSACSHNGLAEECMKYFEL---MEYEYGISPWKEHYSCVIDTLGRVGRF 595
Query: 287 GEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ E+ EM E D W+SI+ GN D +++ S G
Sbjct: 596 DKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFSMG 641
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 17/249 (6%)
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM K G + + + +L +LI G R + +M + + +N ++ Y +
Sbjct: 24 RMVKTGFDPATYRLNLLLHSLISSGRLAQAR---ALFDQMPHRNNAFSLNRMLSGYSRSG 80
Query: 285 CVGEALEIFEMMEE--KDIFSWNSIMTVHEQC--GNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ A +F +D +W ++ + LF ML G PD VT +
Sbjct: 81 QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140
Query: 341 TVL---PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TVL PA AA + +H + + GL + +V + N L+D Y K G +
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHS-------NVVVCNTLLDAYCKHGLLAA 193
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF +M +D ++N M++G +G EALD+F+ M L TF VL+ +
Sbjct: 194 ARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATG 253
Query: 458 SGFLSQGRE 466
G L GR+
Sbjct: 254 VGDLCLGRQ 262
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++++ ++ + G+++HSY++R+G + S S ++L++MY+KC + AL F+
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDE 502
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E N ++NA+IS + A + F M G PD TF ++ C E
Sbjct: 503 MP-ERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEE 561
Query: 153 VKKIHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
K L+ ++ G+ S +++T + ++ ++ E+P D ++W+++++
Sbjct: 562 CMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILH 619
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 311/557 (55%), Gaps = 21/557 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L C +++ ++HS++ +TG +DS +S ++LINMYSK + + VF
Sbjct: 351 TITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVS-SALINMYSKIGVVDLSERVFRE 409
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ N+ + MIS F + + ++ F M Q G+ PDK+ C V+++++
Sbjct: 410 MESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKF-------CSSSVLSIID 462
Query: 153 V----KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ IH + K+GL D+ +GS+L Y KC +EE+ VFE++P +D V W +M+
Sbjct: 463 SLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMIT 522
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+++ +A+++FR M E I + T+T L+A + + G+ VHG ++
Sbjct: 523 GFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGK 582
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V AL++MY K + A +F+M+ +KD FS +S+++ + Q G + L LF +
Sbjct: 583 EVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIR 642
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
A D T S+V+ A + L +L G Q+H + GL +V + ++L+ M
Sbjct: 643 MADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNA--------EVSVGSSLVTM 694
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCGS+ + VF ++ K D+ SW MI+ Y G+G EAL ++ M + KPD VTF
Sbjct: 695 YSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTF 754
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VGVLSACSH+G + +G L M YG+ P HY C++D+LGR+G+L EA MP
Sbjct: 755 VGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMP 814
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E + ++W LLAA ++HG+ +L +AA+RV +LEP G YV +SNI G +E+V+
Sbjct: 815 IEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMK 874
Query: 569 IRHTMRQQNVRKNPGCS 585
IR M V+K PG S
Sbjct: 875 IRSLMEGTGVKKEPGWS 891
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 13/417 (3%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ ++S L+ G + +I++++K C + AL VF ++ CE NV +NA+ISG
Sbjct: 166 GELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCE-NVVCWNAIISGAV 224
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + LD F M +P+ +TF ++ C + + + + G V K G DV+
Sbjct: 225 KNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVF 284
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+A+++ Y KC+ M++A+K F +P+R+VV W +++G+ Q + A F+ M K G
Sbjct: 285 VGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVG 344
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
++ +T+T VL+A K +H + K G+ V +ALI+MY K V +
Sbjct: 345 EKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSE 404
Query: 291 EIFEMMEE-KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+F ME K++ W +++ Q G+ + LF RML G +PD S+VL S +
Sbjct: 405 RVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SII 461
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+L GR IH YI+ GL D+ + ++L MY+KCGS+ ++ VF +M KD
Sbjct: 462 DSLSLGRLIHCYILKIGL--------FTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKD 513
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
SW MI G+ ++A+ +F M +++PD++T L+ACS L +G+E
Sbjct: 514 NVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 258/491 (52%), Gaps = 15/491 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA L+ G+ + ++++ G + T++I++Y+KC M A+ F + N
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIR-N 313
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ +ISGF D + FF MR++G + YT ++ C + + + E ++H
Sbjct: 314 VVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHS 373
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFH 217
+FK G LD + SAL+N Y K ++ + +VF E+ +++ +W M++ +AQ G
Sbjct: 374 WIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTG 433
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+E+F+RM +EG+ +F + VLS + + GR++H ++K+G + + V ++L
Sbjct: 434 RAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL---GRLIHCYILKIGLFTDISVGSSLF 490
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K + E+ +FE M +KD SW S++T + + + ++LF ML +PD +
Sbjct: 491 TMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQM 550
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T + L ACS L +L G+++HGY + + K +V + AL++MY+KCG++
Sbjct: 551 TLTAALTACSALHSLEKGKEVHGYALRARVGK--------EVLVGGALVNMYSKCGAIVL 602
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF + +KD S + ++ GY +G ++AL +F + A L D T V+ A +
Sbjct: 603 ARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAI 662
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L G + L ++ G+ + + ++ M + G ++E +++ + + + W
Sbjct: 663 LNSLDIGTQ-LHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKV-FEQIEKPDLISWT 720
Query: 518 TLLAASRLHGN 528
++ + HG
Sbjct: 721 AMIVSYAQHGK 731
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 252/496 (50%), Gaps = 21/496 (4%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
+ L+ + +H++ L+T I+ S +T SL+ Y K M +AL +F+ + PNV ++N
Sbjct: 58 RCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDK-TPHPNVISWN 116
Query: 104 AMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
+ISG N F+F+ F MR G P+++T+ ++ C + + L + ++ L K
Sbjct: 117 ILISGCNQN-FSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALK 175
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
G + Y+ + +++ + K E+AL+VF+++ +VV WNA+++G + E AL++
Sbjct: 176 NGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDL 235
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F +M + FT + +L+A + + GR V G V+K G V V A+ID+Y K
Sbjct: 236 FCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAK 295
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ + +A++ F M +++ SW +I++ Q + F M G + + T ++V
Sbjct: 296 CRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSV 355
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ + Q+H +I G + + +++AL++MY+K G + ++ VF
Sbjct: 356 LTACTEPVMIKEAVQLHSWIFKTGFYLDSN--------VSSALINMYSKIGVVDLSERVF 407
Query: 403 TKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
+M S K++A W +MI + G A+++F M + L+PD+ VLS L
Sbjct: 408 REMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS---L 464
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
S GR + + G+ I + + M + G L E+Y + MP++ N V W +++
Sbjct: 465 SLGR-LIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDN-VSWASMIT 522
Query: 522 ASRLHGNTDLAEIAAQ 537
H D AE A Q
Sbjct: 523 GFSEH---DHAEQAVQ 535
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 332/620 (53%), Gaps = 44/620 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L+ G+ +H+ +++ + S + +YSKC ++ A VF++ + + N
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH-THDCN 73
Query: 99 VFTYNAMISGFYSNDF--------------------------AFKG-----LDFFNHMRQ 127
VF++N +IS + + A +G F MR+
Sbjct: 74 VFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMRE 133
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ D +T +I C + V ++++H L GLD V +G+AL+ +Y K F++E
Sbjct: 134 AFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKE 191
Query: 188 ALKVFEELPL-RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A ++F L RD V WN+MV Y Q E KALE++ M+ G+ + FT+ VL+A
Sbjct: 192 ARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFT 251
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWN 305
+ G H ++K GY V + LID+Y K G C+ + ++F+ + D+ WN
Sbjct: 252 NVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWN 311
Query: 306 SIMTVHEQCGN-HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
++++ + + D L F ++ G +PD + V+ ACS++++ GRQ+HG +
Sbjct: 312 TMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALK 371
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
+ N + +NNAL+ MY+KCG++RDA+ +F M + + S+N MI GY G
Sbjct: 372 LDIPSN-------RISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHG 424
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
G ++L +F M E P +TF+ VL+AC+H+G + G+ + +M+ ++G+ P H+
Sbjct: 425 MGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
+C+ID+LGRAG+L+EA L +P + W LL A R+HGN +LA AA R+ QL+P
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDP 544
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ YV+++NIY G+ ++ +R MR + V+K PGCSWIE+ +H F++ D HP
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHP 604
Query: 605 EAKSIYAELHSLTARLREHG 624
K I L + ++++ G
Sbjct: 605 MIKKIQEYLEEMMRKIKKVG 624
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQ 82
Q H + + + C++ ++ +G+++H L+ I + +S+ +LI MYSKC
Sbjct: 335 QVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGN 394
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
++ A +F+ + E N +YN+MI+G+ + F+ L F M ++G P TF ++
Sbjct: 395 LRDAKTLFDTMP-EHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLA 453
Query: 143 CCCDVMAVLEVKKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-V 200
C V + K ++ K G++ + S +++ + + EA ++ E +P
Sbjct: 454 ACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGF 513
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRM 226
W+A++ G A++ R+
Sbjct: 514 FFWSALLGACRIHGNVELAIKAANRL 539
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 179/508 (35%), Positives = 291/508 (57%), Gaps = 10/508 (1%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG-LVFKLGLDLDVYIGSALV 176
GL + +++ ++PD + L+K C + V + + +H LV LD + + + +V
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y KC +++A ++F+E+P +D+V W A++ G++Q AL +F +M + G + F
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T++ +L A G +H +K GY S V V +AL+DMY + + A F+ M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
K SWN++++ H + G + L L +M FQP T+S+VL AC+ + AL G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
+H +++ +GL K I F+ N L+DMY K GS+ DA+ VF ++ K DV SWN M
Sbjct: 311 WVHAHMIKSGL------KLI--AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ G G GKE LD F M ++P+E++F+ VL+ACSHSG L +G + LM+ +Y
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYK 421
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
V P + HY +D+LGR G L+ A MP E VW LL A R+H N +L AA
Sbjct: 422 VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAA 481
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+R F+L+P G +L+SNIY + G++ +V +R M++ V+K P CSW+E+++ +H F
Sbjct: 482 ERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLF 541
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
+++D +HP K I + ++ +++E G
Sbjct: 542 VANDETHPRIKEIRGKWEEISGKIKEIG 569
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 175/318 (55%), Gaps = 2/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI-NMYSKCCQMKYALFVFNNLSCEP 97
L+ C +++G+ +H++++ + +D+ L + ++I NMY+KC + A +F+ + +
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK- 152
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ T+ A+I+GF N+ L F M +LG P+ +T L+K + ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G VY+GSALV+ Y +C M+ A F+ +P + V WNA+++G+A+ GE
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL + +M ++ + FT + VLSA +G + G+ VH ++K G + N L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A +F+ + + D+ SWN+++T Q G TL F++ML G +P+ +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392
Query: 338 TFSTVLPACSHLAALMHG 355
+F VL ACSH L G
Sbjct: 393 SFLCVLTACSHSGLLDEG 410
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
NH FTL++ L+ + L G ++H++ L+ G S ++L++MY++C M A
Sbjct: 188 NH-FTLSSL---LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
F+ + + V ++NA+ISG L M++ P +T+ ++ C
Sbjct: 244 QLAFDGMPTKSEV-SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ A+ + K +H + K GL L +IG+ L++ Y K +++A +VF+ L DVV WN M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ G AQ G + L+ F +M + GI + + VL+A G G ++ K
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422
Query: 267 DSGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIM 308
+ VP +D+ G+ + A I EM E W +++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 2/185 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N T T + L CA L++G+ +H++M+++G+ +L++MY+K +
Sbjct: 282 QRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSI 341
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A VF+ L +P+V ++N M++G + + LD F M ++G+ P++ +F C++
Sbjct: 342 DDAKRVFDRL-VKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VL 202
C + E L+ K ++ DV V+ + ++ A + E+P+ +
Sbjct: 401 CSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAV 460
Query: 203 WNAMV 207
W A++
Sbjct: 461 WGALL 465
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 309/574 (53%), Gaps = 42/574 (7%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYS-KCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
+E+H++++RT + P ++ +I YS + A VFN + C P + +N MI G
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIEC-PTLVVWNHMIRGLS 92
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+D + + + M G+ + T L K C V ++ +KIH KLG + ++
Sbjct: 93 QSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLF 152
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +AL++ Y C + A K+F+ + RD+V WN ++ GY+Q ++ + L +F M+
Sbjct: 153 VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN 212
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
I T+ ++ A +G ++ + + + + V + N LIDMYG+ A
Sbjct: 213 IKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQ 272
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD------------------------- 325
+F+ M E++I SWN+++ H + GN +LFD
Sbjct: 273 GVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSD 332
Query: 326 ------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
M++A +PD VT ++VL AC+HL L G +H YI +G+ D+
Sbjct: 333 AVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQA--------DI 384
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
++ N+L+DMY KCG + A VF +M KD SW +I G ++G ALD+FS M
Sbjct: 385 YVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLRE 444
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P TFVG+L AC+H+G +++G E+ MES +G+VP ++HY CV+D+L R+G +++
Sbjct: 445 GVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDK 504
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AYE MP + VVWR LL+A +LHGN LAEIA +R+ +L+P GNYVL+SN Y
Sbjct: 505 AYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAG 564
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
++++ + +R M +V+K G S IE+ DG+
Sbjct: 565 VDRWDDAMKMRELMEDSDVQKPSGSSSIEV-DGM 597
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 193/423 (45%), Gaps = 54/423 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I + CA +++ G++IH + L+ G +LI+MY+ C Q+ +A +F+ +
Sbjct: 118 TLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGM 177
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ ++N +I G+ + + L F+ M + D T +I C +
Sbjct: 178 -LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFA 236
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME--------------------------- 186
+ + + L++DVY+G+ L++ Y + E
Sbjct: 237 DSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKV 296
Query: 187 ----EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
A K+F+ +P RDV+ W +M+ GY+Q +F A+++F+ M + + TV VL
Sbjct: 297 GNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVL 356
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
SA +G G VH + + G + + V N+LIDMY K V +ALE+F M++KD
Sbjct: 357 SACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSV 416
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG------- 355
SW S+++ G + L LF +ML G QP TF +L AC+H + G
Sbjct: 417 SWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESM 476
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWN 414
+HG + K+ C ++D+ ++ G++ A KM DV W
Sbjct: 477 ESVHGLVPA---MKHYGC-----------VVDLLSRSGNIDKAYEFIKKMPIVPDVVVWR 522
Query: 415 IMI 417
I++
Sbjct: 523 ILL 525
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 344/642 (53%), Gaps = 66/642 (10%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK--- 84
H F + + I+ L+ C + + +IHS ++TG+ + L +T +I CC +
Sbjct: 32 HSF-VKSPISLLETC---NTMYEINQIHSQTIKTGLSSNHLFLTKVIIF---CCTKESGD 84
Query: 85 --YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
YA VF+ + +P+VF +N MI G+ + + G+ + M + PD +TFP L+K
Sbjct: 85 VYYARKVFDEIP-QPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLK 143
Query: 143 CCCDVMAV------LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
MA+ L IHG LD ++++ ++ + C + A K+F+
Sbjct: 144 GFTKDMALKYGKVLLNHAVIHGF-----LDSNLFVQKGFIHLFSLCGLVNYARKIFDMGD 198
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL--SALIMMGFFKNG 254
+VV WN +++GY + + ++ +F M K+ +S +VT VL SA + G
Sbjct: 199 GWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGG 258
Query: 255 RVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---- 309
+ ++ +K G + + + NALIDM+ + A +F+ M+ +D+ SW SI+T
Sbjct: 259 KCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFAN 318
Query: 310 ---------VHEQCGNHD---------GTLR---------LFDRMLSAGFQPDLVTFSTV 342
+Q D G LR LF M + +PD T ++
Sbjct: 319 TCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSI 378
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+HL AL G YI N + +D F+ NAL+DMY KCG++ A+ +F
Sbjct: 379 LTACAHLGALELGEWAKTYIDKNKIK--------NDTFIGNALIDMYFKCGNVEKAKKIF 430
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+M KKD +W MI+G +G G+EAL MFS M EA + PDE+T++GV+ AC+H G ++
Sbjct: 431 NEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVA 490
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G+ F M ++G+ P + HY C++D+LGRAG L EA E+ + MP + N +VW +LL A
Sbjct: 491 KGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGA 550
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R+H N LAE+AA + +LEP + YVL+ NIY A K++ + ++R M ++ ++K P
Sbjct: 551 CRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIP 610
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
GCS +E+ ++ F++ D+SHP++K IYA+L ++ L G
Sbjct: 611 GCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAG 652
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 317/586 (54%), Gaps = 42/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM--RQLG 129
SL++ ++ ++ +F +L + + +YNA+++GF + + + + G
Sbjct: 82 SLLSALARAGLVRDMERLFTSLP-QRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAG 140
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY---------- 179
V P + T ++ + +++H + +LG + GS LV+ Y
Sbjct: 141 VRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200
Query: 180 ---------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L+C+ + EA +FE + RD + W MV G Q G +
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESE 260
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL+VFRRM EG+ + ++T +L+A + + G+ +H + + Y+ V V +AL+D
Sbjct: 261 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVD 320
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + V A +F M K+I SW +++ + Q G + +R+F M G +PD T
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFT 380
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+V+ +C++LA+L G Q H +V+GL V ++NAL+ +Y KCGS+ DA
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPY--------VTVSNALVTLYGKCGSIEDA 432
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F +MS D SW +++GY G+ KE +D+F M +KPD VTF+GVLSACS S
Sbjct: 433 HRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRS 492
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +GR + M+ + +VP +HYTC+ID+ R+G L +A E MP + W T
Sbjct: 493 GLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWAT 552
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A RL G+ ++ + AA+ + +L+P + +YVL+ +++ + G++ +V +R MR + V
Sbjct: 553 LLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQV 612
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+K PGCSWI+ K+ +H F + D+SHP +++IY +L L +++ E G
Sbjct: 613 KKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEG 658
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 196/371 (52%), Gaps = 46/371 (12%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
++ G++L++ + + + ++F LP RD V +NA++ G+++ G +A + +
Sbjct: 76 NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135
Query: 228 KE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
++ G+ SR T++GV+ +G GR VH ++++G+ + + L+DMY K
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGP 195
Query: 286 VGEALEI-------------------------------FEMMEEKDIFSWNSIMTVHEQC 314
+G+A + FE +EE+D +W +++T Q
Sbjct: 196 IGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQN 255
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G L +F RM + G D TF ++L AC LAAL G+QIH YI +C
Sbjct: 256 GLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI-------TRTCY 308
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ D+VF+ +AL+DMY+KC S+R A+ VF +M K++ SW MI+GYG +G G+EA+ +FS
Sbjct: 309 E-DNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFS 367
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF--LPLMESRYGVVPTIEHYTCVIDMLG 492
M +KPD+ T V+S+C++ L +G +F L L+ G+ P + ++ + G
Sbjct: 368 EMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS---GLRPYVTVSNALVTLYG 424
Query: 493 RAGQLNEAYEL 503
+ G + +A+ L
Sbjct: 425 KCGSIEDAHRL 435
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 9/276 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C L++G++IH+Y+ RT D+ ++L++MYSKC ++ A VF + + N
Sbjct: 284 LTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWK-N 342
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ AMI G+ N + + F+ M++ G+ PD +T +I C ++ ++ E + H
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L GL V + +ALV Y KC +E+A ++F+E+ D V W A+V GYAQ G+ +
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKE 462
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN---- 274
+++F +M +G+ T GVLSA G GR M D + ++
Sbjct: 463 TIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGR---SYFHSMQQDHDIVPLDDHYT 519
Query: 275 ALIDMYGKGKCVGEALEIFEMMEE-KDIFSWNSIMT 309
+ID+Y + + +A E + M D F W ++++
Sbjct: 520 CMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLS 555
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 328/659 (49%), Gaps = 102/659 (15%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
+GN+ H T +++L+ C+ L +GQ+IHS + ++G++ + SLI+ Y KC
Sbjct: 41 NGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKC 100
Query: 81 CQMKYALFVFNN------LSCE------------------------PNVFTYNAMISGFY 110
+ A +F+ +SC +Y M+ G
Sbjct: 101 RLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLA 160
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N+ + + F MR GV+P++ T +I V +L + +H L FKLGL+
Sbjct: 161 QNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNI 220
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA------------------- 211
+ + LV+ Y C + A +F+E+P R+VV WN M+NGY+
Sbjct: 221 VATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKD 280
Query: 212 ------------QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
QI +AL ++R M + G+ + + ++SA G+ HG
Sbjct: 281 VVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHG 340
Query: 260 IVVKMGYD-------------------------------SGVPVMNALIDMYGKGKCVGE 288
I+V+ G+D V NALI + + + +
Sbjct: 341 IIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQ 400
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A ++F+ M E+D+FSW+S+++ + Q D L+LF M++ G QP+ +T +V A +
Sbjct: 401 ARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIAT 460
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L LM GR H YI+ N + N + +N AL+DMY KCGS+ A +F ++ +
Sbjct: 461 LGTLMEGRWAHEYILSNSIPLNDN--------LNAALIDMYAKCGSITIALQLFYEIQDR 512
Query: 409 --DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
V+ WN +I G M G +L +FS + ++KP+ +TF+GVLSAC H+G + G +
Sbjct: 513 VSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEK 572
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ M++ Y + P I+HY C+ID+LGRAG+L EA E+ MP +A+ V+W TLLAA R H
Sbjct: 573 YFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTH 632
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
GN ++ E AA+ + +L+ H VL+SNIY G++++ +R M+ Q ++K+PGCS
Sbjct: 633 GNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCS 691
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 221/499 (44%), Gaps = 89/499 (17%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
FFN + + T +K C ++A+ + ++IH LVFK GL ++++ ++L++ Y+
Sbjct: 39 FFNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYV 98
Query: 181 KCQF-------------------------------MEEALKVFEELPLRDVVLWNAMVNG 209
KC+ ++ A +FE++P++ V + MV G
Sbjct: 99 KCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMG 158
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS- 268
AQ + +A+ VF+ M G+ + T+ V+SA +G N R++H + K+G ++
Sbjct: 159 LAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEAL 218
Query: 269 ------------------------------GVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
V N +++ Y K V A ++FE +
Sbjct: 219 NIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPA 278
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
KD+ SW +I+ + Q LR++ ML G P+ V ++ AC A+ G+Q
Sbjct: 279 KDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQF 338
Query: 359 HGYIVVNG-----------LAKNGSCKDIDDVFMN------------NALMDMYTKCGSM 395
HG IV G + +C +I+ F+ NAL+ + + G +
Sbjct: 339 HGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMI 398
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+ +F +M ++DV SW+ MI GY + Q AL +F M ++P+E+T V V SA
Sbjct: 399 EQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAI 458
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHY-TCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ G L +GR + S +P ++ +IDM + G + A +L + + + V
Sbjct: 459 ATLGTLMEGRWAHEYILSNS--IPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSV 516
Query: 515 V-WRTLLAASRLHGNTDLA 532
W ++ +HG+ +++
Sbjct: 517 SPWNAIICGLAMHGHANVS 535
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 292/508 (57%), Gaps = 10/508 (1%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG-LVFKLGLDLDVYIGSALV 176
GL + +++ ++PD + L+K C + V + + +H LV LD + + + +V
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y KC +++A ++F+E+P +D+V W A++ G++Q AL +F +M + G+ + F
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
T++ +L A G +H +K GY S V V +AL+DMY + + A F+ M
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
K SWN++++ H + G + L L +M FQP T+S+V AC+ + AL G+
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
+H +++ +GL K I F+ N L+DMY K GS+ DA+ VF ++ K DV SWN M
Sbjct: 311 WVHAHMIKSGL------KLI--AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ G G GKE LD F M ++P+E++F+ VL+ACSHSG L +G + LM+ +Y
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMK-KYK 421
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
V P + HY +D+LGR G L+ A MP E VW LL A R+H N +L AA
Sbjct: 422 VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAA 481
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+R F+L+P G +L+SNIY + G++ +V +R M++ V+K P CSW+E+++ +H F
Sbjct: 482 ERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLF 541
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
+++D +HP+ K I + ++ +++E G
Sbjct: 542 VANDETHPQIKEIRGKWEEISGKIKEIG 569
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 175/318 (55%), Gaps = 2/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI-NMYSKCCQMKYALFVFNNLSCEP 97
L+ C +++G+ +H++++ + +D+ L + ++I NMY+KC + A +F+ + +
Sbjct: 94 LKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK- 152
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ T+ A+I+GF N+ L F M +LG+ P+ +T L+K + ++H
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K G VY+GSALV+ Y +C M+ A F+ +P + V WNA+++G+A+ GE
Sbjct: 213 AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGE 272
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL + +M ++ + FT + V SA +G + G+ VH ++K G + N L+
Sbjct: 273 HALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + +A +F+ + + D+ SWN+++T Q G TL F++ML G +P+ +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEI 392
Query: 338 TFSTVLPACSHLAALMHG 355
+F VL ACSH L G
Sbjct: 393 SFLCVLTACSHSGLLDEG 410
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
NH FTL++ L+ + L G ++H++ L+ G S ++L++MY++C M A
Sbjct: 188 NH-FTLSSL---LKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
F+ + + V ++NA+ISG L M++ P +T+ + C
Sbjct: 244 QLAFDGMPTKSEV-SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ A+ + K +H + K GL L +IG+ L++ Y K +++A +VF+ L DVV WN M
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTM 362
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ G AQ G + L+ F +M + GI + + VL+A G G ++ K
Sbjct: 363 LTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422
Query: 267 DSGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIM 308
+ VP +D+ G+ + A I EM E W +++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 336/633 (53%), Gaps = 29/633 (4%)
Query: 27 NHPFTLATCIASLQLCAH----QTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKC 80
HP T T ++ L+ +H ++ G+E H++ L+ G++ + +L++MY++
Sbjct: 5 GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64
Query: 81 CQMKYALFVFNNLS-CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
+ A +F + +V T+N M+S + + + M LGV PD TF
Sbjct: 65 GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELP-- 196
+ C + + +++H V K L + ++ SALV+ Y + + +A +VF+ +P
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 184
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGR 255
+ + +WNAM+ GYAQ G +AL +F RM E G T+ VL A F
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHE 312
VHG VVK G V NAL+DMY + A IF M++ D+ SWN+++T V
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ R ++ G P+ +T T+LP C+ LAA G++IHGY V + L
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDT--- 361
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
DV + +AL+DMY KCG + ++ VF ++ +++ +WN++I+ YGM G G EA +
Sbjct: 362 -----DVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 416
Query: 433 FSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M + +P+EVTF+ L+ACSHSG + +G + ME +GV PT + CV+D+L
Sbjct: 417 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 476
Query: 492 GRAGQLNEAYELALAM-PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
GRAG+L+EAY + +M E W T+L A RLH N L EIA +R+ +LEP +Y
Sbjct: 477 GRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 536
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+ NIY A G++ ++R MR++ V K PGCSWIE+ +H F++ + +HP ++ ++
Sbjct: 537 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 596
Query: 611 AELHSLTARLREHG-----DCCAGTLFDSDSTA 638
A + +L + G C + D D A
Sbjct: 597 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAA 629
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 298/571 (52%), Gaps = 52/571 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK---YALFVF 90
T + L +L + Q+ H++ML+TG+ S + L+ + + K YA +
Sbjct: 8 TPVPILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 67
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + PN FT+N++I + ++ L F M V PDKY+F ++K C
Sbjct: 68 NRIES-PNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 126
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
E ++IHGL K L DV++ + L+N Y + + E A KV + +P+RD V WN++++ Y
Sbjct: 127 EEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAY 186
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G +A +F M + + F ++G
Sbjct: 187 LDKGLVEEARALFDEMEERNVESWNFMISG------------------------------ 216
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-S 329
Y V EA E+F+ M KD+ SWN+++T + G ++ L +F+ ML
Sbjct: 217 ---------YAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDD 267
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+ +PD T VL AC+ L +L G +H YI +G+ G F+ AL+DMY
Sbjct: 268 SAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEG--------FVATALVDMY 319
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCG + A VF SK+DV++WN +I G + G GK+AL++FS M KP+ +TF+
Sbjct: 320 SKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFI 379
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSAC+H G L Q R+ +M S YG+ PTIEHY C++D+LGR G+ EA EL +P
Sbjct: 380 GVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPA 439
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ ++ +LL A + G + AE A R+ + P YV MSN+Y + G+++E +++
Sbjct: 440 DEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEV 499
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
R MR + V+KNPGCS IE+ +H F++ +
Sbjct: 500 RGKMRAERVKKNPGCSMIEVDGVVHEFLAGE 530
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 322/576 (55%), Gaps = 14/576 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H +++ G + +SL++MY+KC +++ A F +S EPN ++NA+I+GF
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFV 178
Query: 111 SNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
M + V D TF L+ D M +K++H V KLGL ++
Sbjct: 179 QVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI 238
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
I +A++++Y C + +A +VF+ L +D++ WN+M+ G+++ A E+F +M +
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
+ +T TG+LSA G+ +HG+V+K G + NALI MY + +
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+AL +FE ++ KD+ SWNSI+T Q G + ++ F + S+ + D FS +L +C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S LA L G+QIH +G N F+ ++L+ MY+KCG + A+ F ++S
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNE--------FVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 407 KK-DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K +WN MILGY G G+ +LD+FS MC +K D VTF +L+ACSH+G + +G
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L LME Y + P +EHY +D+LGRAG +N+A EL +MP +P+V +T L R
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
G ++A A + ++EP YV +S++Y K+EE ++ M+++ V+K PG S
Sbjct: 591 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
WIE+++ + F + DRS+P + IY + LT ++
Sbjct: 651 WIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 234/484 (48%), Gaps = 14/484 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
QK H Y ++ G I +++ Y K + YA +F+ + +V ++N MIS
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV-SWNTMIS 74
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ S F M++ G D Y+F L+K V +++HGLV K G +
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+VY+GS+LV+ Y KC+ +E+A + F+E+ + V WNA++ G+ Q+ + A + M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 228 -KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
K + M T +L+ L F + VH V+K+G + + NA+I Y V
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 287 GEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+A +F+ + KD+ SWNS++ + + LF +M + D+ T++ +L A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK--CGSMRDAQMVFT 403
CS + G+ +HG ++ GL + S NAL+ MY + G+M DA +F
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSA--------TNALISMYIQFPTGTMEDALSLFE 366
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ KD+ SWN +I G+ G ++A+ FS + +++K D+ F +L +CS L
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G++ L ++ G V + +I M + G + A + + ++ + V W ++
Sbjct: 427 GQQIHAL-ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 524 RLHG 527
HG
Sbjct: 486 AQHG 489
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F++ SS + ++ F+ A L+ C+ LQ GQ+IH+ ++G + + I+SLI
Sbjct: 396 FSYLRSSEIKVDDYAFS-----ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MYSKC ++ A F +S + + +NAMI G+ + LD F+ M V D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 135 YTFPCLIKCCCDVMAV---LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
TF ++ C + LE+ + V+K+ ++ Y +A V+ + + +A ++
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY--AAAVDLLGRAGLVNKAKEL 568
Query: 192 FEELPL 197
E +PL
Sbjct: 569 IESMPL 574
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 287/493 (58%), Gaps = 11/493 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D+ + L+K C + + + +HG + + D+ + + L+N Y KC +EEA KVF
Sbjct: 50 DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++P RD V W +++GY+Q AL +F +M + G + FT++ V+ A
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH- 311
G +HG VK G+DS V V +AL+D+Y + + +A +F+ +E ++ SWN+++ H
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
+CG + L LF ML GF+P +++++ ACS L G+ +H Y++ +G
Sbjct: 230 RRCGT-EKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG----- 283
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
+ F N L+DMY K GS+ DA+ +F +++K+DV SWN ++ Y G G EA+
Sbjct: 284 ---EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVC 340
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
F M ++P+E++F+ VL+ACSHSG L +G + LM+ + G+V HY ++D+L
Sbjct: 341 WFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVLEAWHYVTIVDLL 399
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
GRAG LN A MP E +W+ LL A R+H NT+L AA+ VF+L+P G +V
Sbjct: 400 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 459
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA 611
++ NIY +GG++ + +R M++ V+K P CSW+E+++ +H F+++D HP+ + I
Sbjct: 460 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 519
Query: 612 ELHSLTARLREHG 624
+ + A+++E G
Sbjct: 520 KWEEVLAKIKELG 532
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 197/380 (51%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L +G+ +H +++++ + +L+NMY+KC ++ A VF+ + E +
Sbjct: 58 LKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP-ERD 116
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ +ISG+ +D F L FN M + G P+++T +IK ++HG
Sbjct: 117 FVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHG 176
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D +V++GSAL++ Y + M++A VF+ L R+ V WNA++ G+A+ K
Sbjct: 177 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEK 236
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F+ M +EG S F+ + A GF + G+ VH ++K G N L+D
Sbjct: 237 ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 296
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +IF+ + ++D+ SWNS++T + Q G + + F+ M G +P+ ++
Sbjct: 297 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEIS 356
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G + + +G+ + + + ++D+ + G + A
Sbjct: 357 FLSVLTACSHSGLLDEGWHYYELMKKDGI--------VLEAWHYVTIVDLLGRAGDLNRA 408
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M + A+ W ++
Sbjct: 409 LRFIEEMPIEPTAAIWKALL 428
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 10/293 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ I + A + G ++H + ++ G DS + + ++L+++Y++ M A
Sbjct: 153 FTLSSVIKA---AAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDLYTRYGLMDDAQL 208
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L +V ++NA+I+G K L+ F M + G P +++ L C
Sbjct: 209 VFDALESRNDV-SWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTG 267
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + K +H + K G L + G+ L++ Y K + +A K+F+ L RDVV WN+++
Sbjct: 268 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 327
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++A+ F M + GI + + VL+A G G + ++ K G
Sbjct: 328 AYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVL 387
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGT 320
++D+ G+ + AL E M E W +++ C H T
Sbjct: 388 EAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA---CRMHKNT 437
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 302/562 (53%), Gaps = 19/562 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN--MYSKCCQMKYALFVFNNLSCE 96
L L A ++++ +++H ++ T I S + ++ LI+ + S+ + YA V +
Sbjct: 8 LSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIH-N 66
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P+V+ +N+MI GF ++ + + M + G PD +TFP ++K CC + K I
Sbjct: 67 PSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCI 126
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + K G + D Y + L++ Y+ C M+ LKVF+ +P +VV W ++ GY + +
Sbjct: 127 HSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQP 186
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-------SG 269
++AL+VF MS + + T+ L A GR VH + K GYD S
Sbjct: 187 YEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSN 246
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + A+++MY K + A ++F M +++I SWNS++ + Q H L LF M +
Sbjct: 247 IILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWT 306
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G PD TF +VL C+H AL G+ +H Y++ G+A D+ + AL+DMY
Sbjct: 307 SGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIAT--------DISLATALLDMY 358
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTF 448
K G + +AQ +F+ + KKDV W MI G M G G EAL MF M E + L PD +T+
Sbjct: 359 AKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITY 418
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL ACSH G + + ++ LM YG+VP EHY C++D+L RAG EA L M
Sbjct: 419 IGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMT 478
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ N +W LL ++H N +A R+ +LEP G ++L+SNIY G++EEV
Sbjct: 479 VQPNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNV 538
Query: 569 IRHTMRQQNVRKNPGCSWIELK 590
R M+ + + K G S +E+K
Sbjct: 539 TRKVMKHKRITKTIGHSSVEMK 560
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI--------TSLINMYSKCCQMKY 85
T + +L CAH ++ G+ +H + + G D +S T+++ MY+KC ++K
Sbjct: 207 TMVNALIACAHSRDIDTGRWVHQRIRKAG-YDPFMSTSNSNIILATAILEMYAKCGRLKI 265
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A +FN + + N+ ++N+MI+ + + + LD F M GV PDK TF ++ C
Sbjct: 266 ARDLFNKMP-QRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCA 324
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
A+ + +H + K G+ D+ + +AL++ Y K + A K+F L +DVV+W +
Sbjct: 325 HQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTS 384
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+NG A G ++AL +F+ M ++ + T GVL A +G + + ++ +M
Sbjct: 385 MINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEM 444
Query: 265 -GYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT---VHEQ-CGNHD 318
G G ++D+ + EA + E M + +I W +++ +HE C +
Sbjct: 445 YGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNGCQIHENVCVANQ 504
Query: 319 GTLRL 323
+RL
Sbjct: 505 VKVRL 509
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ L +CAHQ L GQ +H+Y+L+TGI T+L++MY+K ++ A +F++
Sbjct: 314 ATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQKIFSS 373
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVL 151
L + +V + +MI+G + + L F M++ ++PD T+ ++ C V V
Sbjct: 374 LQ-KKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVE 432
Query: 152 EVKKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
E KK L+ ++ G+ +V+ + EA ++ E + ++ ++ +W A++NG
Sbjct: 433 EAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNG 492
Query: 210 YAQIGE 215
QI E
Sbjct: 493 -CQIHE 497
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 197/575 (34%), Positives = 310/575 (53%), Gaps = 48/575 (8%)
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV--- 153
PN + M+ GF + L F + + + D TF +K
Sbjct: 99 PNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTP 158
Query: 154 ---KKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ IH K G + V +G+ALV+ Y + +++A KVF+E+P RDVV W +V+G
Sbjct: 159 SGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDG 218
Query: 210 YAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YA+ G +A +F RM G+ + T+ +SA+ MG G ++H V + G
Sbjct: 219 YARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVAR 278
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--- 325
V + NAL+DM+GK CV A E+F+ ME KD++SW S++ + +CG+ + +LF
Sbjct: 279 SVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMP 338
Query: 326 ----------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
M++AG P T +VL AC+ L L GR
Sbjct: 339 RRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRW 398
Query: 358 IH-GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
I+ YIV N + V + NAL+DM+ KCG + +A +F +M++++V SWN M
Sbjct: 399 IYENYIVSNKIGLT--------VNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTM 450
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
I+ + + GQ +EA+ +F + + PD++TF+G+L++CSHSG +S+GR + ME Y
Sbjct: 451 IMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYR 510
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
+ P +EHY C+ID+LG+ G L EA+E+A MP EA+ W LL A R+HGN ++ A
Sbjct: 511 IEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVA 570
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
++ +L+P G YVLMS IY + K+++V +R TMR + V+KNPGCS IE++ H F
Sbjct: 571 DKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDF 630
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTL 631
+ +D SH ++ IY+ L ++ L++ GT+
Sbjct: 631 LVADVSHACSEEIYSALKNIYFHLKQEDMSWQGTI 665
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFN 91
AT ++ L CA L G+ I+ + + I +++ +LI+M++KC + A +F+
Sbjct: 378 ATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFD 437
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ E NV ++N MI + + + + F ++ ++PD+ TF L+ C V
Sbjct: 438 EMA-ERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVS 496
Query: 152 EVKKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E ++ + +++ ++ Y + +++ K +EEA +V +P+ D W A++
Sbjct: 497 EGRRYFKEMEMFYRIEPRVEHY--ACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALL 554
Query: 208 NG 209
N
Sbjct: 555 NA 556
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 320/573 (55%), Gaps = 9/573 (1%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
Q +H+ +++ G S++N+Y KC +++ A +F + +V ++N+++SG+
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR-DVISWNSLVSGYAQ 224
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ L M+ G+ PD+ TF L+ + K +HG + + GL+ D +I
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
++L+ YLKC + A ++FE + +DV+ W AM++G Q A+ VFRRM K +
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRV 344
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
S T+ VL+A +G F G VHG +++ +P N+L+ MY K + ++
Sbjct: 345 MPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ M +DI SWN+I++ H Q G+ L LF+ M A +PD +T ++L AC+ + A
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA 464
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+ IH ++ + L G C + ++ AL+DMY+KCG + AQ F +M ++D+
Sbjct: 465 LHQGKWIHNFVTKSCL---GPC-----ILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLV 516
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW+ +I GYG G+G+ AL M+S ++P+ V ++ +LSACSH+G + QG F M
Sbjct: 517 SWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSM 576
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+G+ P +EH C++D+L RAG++ EAY M + + V LL A R GN +L
Sbjct: 577 TKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVEL 636
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+I A+ + L+P + GNYV +++ Y + +++ V ++ M+ +++K PG S+IEL
Sbjct: 637 GDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHG 696
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ TF + SHP+ + I L L + +R+ G
Sbjct: 697 TITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 289/574 (50%), Gaps = 40/574 (6%)
Query: 11 FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
+SS + T TF P + C SL L +H G H ++ G
Sbjct: 36 YSSMLSTDTPPDAHTF--PSLVKAC-TSLDLFSH------GLSFHQRVIVDGYSSDSYIA 86
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS----NDFAFKGLDFFNHMR 126
TSLIN YSK + A VF+ + + NV + MI G Y+ +D AF +N MR
Sbjct: 87 TSLINFYSKFGHNQSARKVFDTMD-DRNVVPWTTMI-GCYTRAGEHDVAFS---MYNIMR 141
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ G+ P T L+ V+ ++ ++ +H V + G DV + ++++N Y KC +E
Sbjct: 142 RQGIQPSSVTMLGLLS---GVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+A +FE + RDV+ WN++V+GYAQ+G + L++ RM +GI + T ++SA
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
M G++VHG +++ G + + +LI MY K V A IFE M KD+ SW +
Sbjct: 259 MQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTA 318
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+++ Q D + +F RML + P T ++VL AC+ L + G +HGYI+
Sbjct: 319 MISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQR 378
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ D+ N+L+ MY KCG + + VF +MS++D+ SWN ++ G+ +G
Sbjct: 379 IKL--------DIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+AL +F+ M +A+ +PD +T V +L AC+ G L QG+ ++ ++ + P I T
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGK-WIHNFVTKSCLGPCILIDTA 489
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEP 544
++DM + G L A + MP + + V W +++A HG + A R++ L
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGE----TALRMYSDFLHT 544
Query: 545 GHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQ 575
G N+V+ +I A G ++ L H+M +
Sbjct: 545 GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 13/339 (3%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
+NA++N + G F L + M T ++ A + F +G H V+
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
GY S + +LI+ Y K A ++F+ M+++++ W +++ + + G HD
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+++ M G QP VT +L S + L+H + +H ++ G DV +
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGS--------DVALA 184
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+++++Y KCG + DAQ +F M +DV SWN ++ GY G +E L + M ++
Sbjct: 185 NSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIE 244
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD+ TF ++SA + L G+ + R G+ T +I M + G +N A+
Sbjct: 245 PDQQTFGSLVSAAAMQSKLGVGKMVHGHIL-RAGLEQDSHIETSLIGMYLKCGNVNSAFR 303
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
+ M ++ + + W +++ + D+A +R+ +
Sbjct: 304 IFEGMMHK-DVISWTAMISGLVQNDCADMAVTVFRRMLK 341
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+N+I+ G L + MLS PD TF +++ AC+ L HG H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+V+G + D ++ +L++ Y+K G + A+ VF M ++V W MI Y
Sbjct: 75 IVDGYSS--------DSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
G+ A M++ M ++P VT +G+LS
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSG 158
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 324/573 (56%), Gaps = 13/573 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYAL 87
P +A+ ++ + C + + G +H +L++G+ DS +++ +L++MY K ++ ++
Sbjct: 210 PVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGL-DSVVNLGNALVDMYGKFGDLESSM 268
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VFN + E N ++N+ + F F L+ F M + V P T L+ D+
Sbjct: 269 RVFNGMQ-EKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDL 327
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
K++HG + ++ D++I ++L++ Y K +E+A +FE + R+VV WNAM+
Sbjct: 328 GYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMI 387
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
AQ G +A + M K G + FT+ +L A + K G+ +H +
Sbjct: 388 ANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLM 447
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V NALID+Y K + A +IF+ E+ D+ S+N+++ + Q +L LF +M
Sbjct: 448 SDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLIVGYSQSQCCFESLHLFQQM 506
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
SAG + D V+F L AC++L+A G++IHG +V L + F+ N+L+D
Sbjct: 507 RSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHP--------FLANSLLD 558
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+YTK G + A +F ++++KDVASWN MILGYGM GQ A ++F M + + D V+
Sbjct: 559 LYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVS 618
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
++ VLSACSH G + +G+++ M ++ + P HY C++D+LGRAGQL+E+ E+ M
Sbjct: 619 YIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNM 677
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P AN VW LL + R+HG+ +LA +AA+ +F+L+P H G Y L+ N+Y G + E
Sbjct: 678 PFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEAN 737
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+I+ M+ + V+KNP SW++ + L F+ D
Sbjct: 738 EIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 770
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 264/520 (50%), Gaps = 15/520 (2%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL-SITSL 73
+N SG + + F A A+ + A + KG E+H+ LR G++ + + + +L
Sbjct: 94 YNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTL 153
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
+ Y+ + A VF+ + ++ ++N+++S +N M + G+ +
Sbjct: 154 VTFYAARGRAADARRVFDEMPAR-DIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVN 212
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
+ ++ C +HGLV K GLD V +G+ALV+ Y K +E +++VF
Sbjct: 213 VASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFN 272
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+ ++ V WN+ + +A G LE+FR MS+ + T++ +L AL+ +G+F
Sbjct: 273 GMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHL 332
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VHG ++ +S + + N+L+DMY K C+ +A IFE +E +++ SWN+++ Q
Sbjct: 333 GKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQ 392
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G L M G P+ T +LPACS +A++ G+QIH + + L
Sbjct: 393 NGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSL------ 446
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ D+F++NAL+D+Y KCG + AQ +F + K DV S+N +I+GY E+L +F
Sbjct: 447 --MSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLIVGYSQSQCCFESLHLF 503
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR-YGVVPTIEHYTCVIDMLG 492
M A ++ D V+F+G LSAC++ QG+E ++ R P + + ++D+
Sbjct: 504 QQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLAN--SLLDLYT 561
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ G L A ++ + W T++ +HG D+A
Sbjct: 562 KGGMLATASKI-FNRITRKDVASWNTMILGYGMHGQIDVA 600
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 213/460 (46%), Gaps = 17/460 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCE-PNVFTYNAMISGF 109
+ H+ L +G + + L + +L+ Y+ + A + + + F +N++
Sbjct: 22 RRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRAL 81
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-----KKIHGLVFKLG 164
S + L +N M + GV PD TFP + + ++H + G
Sbjct: 82 ASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRG 141
Query: 165 LDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
L L DV+ G+ LV Y +A +VF+E+P RD+V WN++V+ G A
Sbjct: 142 LLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAV 201
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M + GI ++ ++ V+ A G VHG+V+K G DS V + NAL+DMYGK
Sbjct: 202 VGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKF 261
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ ++ +F M+EK+ SWNS + G H+ L +F M P VT S++L
Sbjct: 262 GDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLL 321
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
PA L G+++HGY + + D+F+ N+LMDMY K G + A +F
Sbjct: 322 PALVDLGYFHLGKEVHGYSIRRAMES--------DIFIANSLMDMYAKFGCLEKASAIFE 373
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ ++V SWN MI +G EA + M + P+ T V +L ACS +
Sbjct: 374 NIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKM 433
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
G++ R ++ + +ID+ + GQL+ A ++
Sbjct: 434 GKQIHAWSIHR-SLMSDLFVSNALIDVYAKCGQLSVAQDI 472
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 109/267 (40%), Gaps = 16/267 (5%)
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM--MEEKDIFSWNSIMTVHEQCGNHD 318
+V + +P+ AL+ Y + + A I + + F WNS+ G
Sbjct: 29 LVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPS 88
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM-----HGRQIHGYIVVNGLAKNGSC 373
LR+++ M+ +G +PD TF L A + G ++H + GL
Sbjct: 89 EALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLL----- 143
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ DVF N L+ Y G DA+ VF +M +D+ SWN ++ +G ++A
Sbjct: 144 --LADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAV 201
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + + + + V V+ AC G L+ + G+ + ++DM G+
Sbjct: 202 VGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLV-LKSGLDSVVNLGNALVDMYGK 260
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLL 520
G L + + M E N V W + L
Sbjct: 261 FGDLESSMRVFNGM-QEKNEVSWNSAL 286
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 300/537 (55%), Gaps = 29/537 (5%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+PN+ +++A+I GF N + + L+ M+ G P+ T ++ C + + K+
Sbjct: 8 KPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKE 67
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG V + G + ++ + LV+ Y +C M ALK+F +++VV +N M+ GY + G
Sbjct: 68 IHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGN 127
Query: 216 FHKALEVFRRMS---KEGI-WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
KA E+F +M K+ I W S ++G L+ K ++ V +
Sbjct: 128 VEKAKELFDQMELVGKDTISWNS--MISGYADNLLKCEDLKAAQLAFDGVT----ERDTA 181
Query: 272 VMNALIDMYGKGKCVGEALEIFEMME-------EKDIFSWNSIMTVHEQCGNHDGTLRLF 324
N LI Y C + I +++ E ++++WN I++ H + G+++ LRLF
Sbjct: 182 TWNVLISGYA---CCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLF 238
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M ++ +PD+ T +LPAC+ LA + G+Q+H + + G DV + A
Sbjct: 239 TEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYEL--------DVHIGAA 290
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY KCGS++ A V+ ++S ++ S N M+ Y M G G E + +F M +PD
Sbjct: 291 LVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPD 350
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
VTF+ VLS+C H+G + G EF LM + Y V P+++HYTC++D+L RAG+L+EAYEL
Sbjct: 351 HVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAYELV 409
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
+P + + V+W LL + GN +L EIAA+ + +LEP + GNYVL++N+Y G++
Sbjct: 410 KKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWH 469
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++ R ++ + + K+PGCSWIE ++ +H F+S D+SH + + IY L +L +R
Sbjct: 470 DLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDNLNTHMR 526
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 188/394 (47%), Gaps = 22/394 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA NL G+EIH Y+ R G + +P + L+++Y +C M AL +F+
Sbjct: 48 TLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGF 107
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + NV +YN MI G+ N K + F+ M +G D ++ +I D + E
Sbjct: 108 SVK-NVVSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNSMISGYADNLLKCED 164
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP----LRDVVLWNAMVNG 209
K L F + D + L++ Y C +E + +++ +V WN +++G
Sbjct: 165 LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG 224
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ + G AL +F M + +TV +L A + G+ VH ++ GY+
Sbjct: 225 HVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELD 284
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + AL+DMY K + A++++ + ++ S N+++T + G+ D + LF ML
Sbjct: 285 VHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLG 344
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQ---IHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
GF+PD VTF +VL +C H A+ G + + Y V K+ +C ++
Sbjct: 345 NGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTC-----------IV 393
Query: 387 DMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILG 419
D+ ++ G + +A + K+ +K D W ++ G
Sbjct: 394 DLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGG 427
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
M ++ SK ++ SW+ +I G+ +G KEAL++ M A +P+ T VL AC+
Sbjct: 1 MSCSENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQ 60
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L+ G+E + +R+G + ++D+ R + A ++ + + N V + T+
Sbjct: 61 NLNLGKEIHGYV-TRHGFMSNPFVVNGLVDVYRRCADMGSALKI-FSGFSVKNVVSYNTM 118
Query: 520 LAASRLHGNTDLAE 533
+ +GN + A+
Sbjct: 119 IVGYCENGNVEKAK 132
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 323/595 (54%), Gaps = 13/595 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T++T ++ L HQ + G+ IH +++ G +L+ MY+ + + A VF
Sbjct: 364 TVSTLLSVLGDVDHQ---KWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVF 420
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + ++ ++N++++ F ++ + L M + G + TF + C
Sbjct: 421 KQMPTK-DLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFF 479
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ + +HGLV GL + IG+ALV+ Y K M + +V ++P RDVV WNA++ GY
Sbjct: 480 DKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGY 539
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVVKMGYDSG 269
A+ + KAL F+ + EG+ + TV VLSA ++ G + G+ +H +V G++S
Sbjct: 540 AENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESD 599
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V N+LI MY K + + ++F ++ + I +WN+I+ + G+ + L+L +M S
Sbjct: 600 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRS 659
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G D +FS L A + LA L G+Q+HG V G D F+ NA DMY
Sbjct: 660 FGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEL--------DCFIFNAAADMY 711
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCG + + + + + SWNI+I G G +E + F M E +KP VTFV
Sbjct: 712 SKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFV 771
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L+ACSH G + QG + ++ +G+ P IEH CVID+LGR+G+L EA MP
Sbjct: 772 SLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPM 831
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ N +VWR+LLA+ ++H + D AA+ + +LEP +VL SN++ G++E+V ++
Sbjct: 832 KPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENV 891
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M +N++K CSW++LKD + +F DR+HP+ IYA+L + ++E G
Sbjct: 892 RKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 946
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 260/516 (50%), Gaps = 16/516 (3%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T G+ +H+ ++ + S L +LINMY+K ++K A ++F+ + N ++N M
Sbjct: 72 TRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVR-NEVSWNTM 130
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL-EVKKIHGLVFKLG 164
+SG +G++FF M LG+ P + L+ C ++ E ++HG V K G
Sbjct: 131 MSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSG 190
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
L DVY+ +A+++ Y + + KVFEE+P R+VV W +++ GY+ GE + +++++
Sbjct: 191 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 250
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M EG+ + +++ V+S+ ++ GR + G V+K G +S + V N+LI M+G
Sbjct: 251 SMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMG 310
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A IF + E+D SWNSI+ + Q G+ + + R+F+ M + + T ST+L
Sbjct: 311 NVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLS 370
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF-MNNALMDMYTKCGSMRDAQMVFT 403
+ GR IHG +V G D V + N L+ MY G +A +VF
Sbjct: 371 VLGDVDHQKWGRGIHGLVVKMGF---------DSVVCVCNTLLRMYAGAGRSEEADLVFK 421
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+M KD+ SWN ++ + DG+ +AL + M + VTF L+AC F +
Sbjct: 422 QMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDK 481
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
GR L+ G+ ++ M G+ G ++ + + L MP + V W L+
Sbjct: 482 GRILHGLVVVS-GLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRR-DVVAWNALIGGY 539
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ + D A +AA + ++E G NY+ + ++ A
Sbjct: 540 AENEDPDKA-LAAFQTLRVE-GVSANYITVVSVLSA 573
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 320/596 (53%), Gaps = 9/596 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T + +Q CA L+ G ++H ++ +I+ + +L+NMYS ++ + +
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM- 148
FN + +N+MIS + F + + F MR + D T ++ C D+
Sbjct: 320 FNAVPTSDAAL-WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + +H K G++LD Y+G+AL++ Y+K + A VFE++ DV+ WN M++
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+AQ KA E+F M + I + +T+ +L+ GR +HG +K G +
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ +L +MY A +F ++D+ SWNS+++ + + N L LF+ M+
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S +P+ VT +L +C+ LA L G+ +H Y ++ D + NA + M
Sbjct: 559 SE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM------DASLANAFITM 611
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG ++ A+ +F + + + SWN MI GYGM G+G++A F+ M + KP+ V+F
Sbjct: 612 YARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSF 671
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VLSACSHSG G + M +G+ P + HY C++D+LGR G +EA +MP
Sbjct: 672 ASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMP 731
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E + +WR LL++ ++ N L E ++ +LEP + GN++L+SNIY A G + EV+
Sbjct: 732 IEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQ 791
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR +R++ + K PG SWI + + +H F ++D HP+++ IY L+SLT+ +R+ G
Sbjct: 792 IRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 219/437 (50%), Gaps = 12/437 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT L+ C + G IHS + +I+ T+L++ Y KC + A VF
Sbjct: 61 ATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E ++ ++NA+ISG+ + + F M++ G+ P+ T L+ C +++ +
Sbjct: 121 MP-ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRL 179
Query: 153 VKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IHG + GL D+D Y+G+ALV Y++ + +VF + +R++V WNA++ G+
Sbjct: 180 GQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFL 238
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+G+ KAL+++ M EGI T+ V+ A G + G +H + +K + +
Sbjct: 239 NVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLF 298
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
++NAL++MY + + +F + D WNS+++ + G H + LF +M
Sbjct: 299 ILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLER 358
Query: 332 FQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D+ T + +L C+ L + GR +H + + +G+ D ++ NAL+ MY
Sbjct: 359 IKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIEL--------DAYLGNALLSMYV 410
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K + AQ VF KM DV SWN MI + +A ++F MCE+++K + T V
Sbjct: 411 KHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVS 470
Query: 451 VLSACSHSGFLSQGREF 467
+L+ C L GR
Sbjct: 471 LLAFCKDGSDLVFGRSI 487
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 179/346 (51%), Gaps = 12/346 (3%)
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
ND A L + M LG+ PD T P ++K C + A+ +IH + L L DV +
Sbjct: 40 NDHAI--LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRV 97
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G+ALV+ Y KC + EA KVF E+P RD+V WNA+++GY + +A+ +F M K G+
Sbjct: 98 GTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEAL 290
+ TV +L A M + G+ +HG ++ G +D V AL+ Y + V +
Sbjct: 158 TPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSH 216
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F +M ++I SWN+I+T G+ L+L+ ML G + D VT V+ AC+
Sbjct: 217 RVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G Q+H + L I+D+F+ NAL++MY+ GS+ + +F + D
Sbjct: 277 CLRLGMQLHQLAIKFNL--------INDLFILNALLNMYSDNGSLESSWALFNAVPTSDA 328
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A WN MI Y G EA+ +F M ++K D T +LS C+
Sbjct: 329 ALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN+++ + ++ H L + +M GI T+ VL A + NG +H +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ + V V AL+D Y K V EA ++F M E+D+ SWN++++ + C + +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF M AG P+ T +L AC + L G++IHGY + NGL D ++
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDM-------DAYVG 200
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
AL+ Y + ++ + VF+ M +++ SWN +I G+ G +AL ++S M +K
Sbjct: 201 TALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIK 259
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
D VT + V+ AC+ G L G + L + ++ ++ + +++M G L ++
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 503 LALAMPNEANPVVWRTLLAA 522
L A+P ++ +W +++++
Sbjct: 319 LFNAVPT-SDAALWNSMISS 337
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/639 (30%), Positives = 334/639 (52%), Gaps = 40/639 (6%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
N+T H T L +++++ + +H+ ++ G+ +++ L+++ +
Sbjct: 27 NKTIWHQLKSPTHQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGD 86
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
++YA +F+ + +PN F YN +I G+ +++ K L F M G +P+++TFP ++K
Sbjct: 87 LRYAHLLFDQIP-QPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLK 145
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C E +H KLG+ + +A++ Y+ C+ + A +VF+++ R +V
Sbjct: 146 ACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVS 205
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN+M+ GY+++G +A+ +F+ M + G+ FT+ +LSA GR VH +V
Sbjct: 206 WNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIV 265
Query: 263 KMGYDSGVPVMNALIDMYGK-------------------------------GKCVGEALE 291
G + V NALIDMY K V A++
Sbjct: 266 ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQ 325
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
IF M K++ SWNSI+ Q G + + LF RM +G PD T ++L CS+
Sbjct: 326 IFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGD 385
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+Q H YI N + + V + N+L+DMY KCG+++ A +F M +K+V
Sbjct: 386 LALGKQAHCYICDNIITVS--------VTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVV 437
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN++I + G G+EA++MF M + L PDE+TF G+LSACSHSG + GR + +M
Sbjct: 438 SWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIM 497
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
S + + P +EHY C++D+LGR G L EA L MP + + VVW LL A R++GN ++
Sbjct: 498 ISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEI 557
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
A+ +++ +L + G YVL+SN+Y +++++ IR M ++K S+IE+
Sbjct: 558 AKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFIEIDG 617
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGT 630
+ F+ D+ H + IY+ L L L+ G C +
Sbjct: 618 CCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGYPCKSS 656
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 320/596 (53%), Gaps = 9/596 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T + +Q CA L+ G ++H ++ +I+ + +L+NMYS ++ + +
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWAL 319
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM- 148
FN + +N+MIS + F + + F MR + D T ++ C D+
Sbjct: 320 FNAVPTSDAAL-WNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + +H K G++LD Y+G+AL++ Y+K + A VFE++ DV+ WN M++
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+AQ KA E+F M + I + +T+ +L+ GR +HG +K G +
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ +L +MY A +F ++D+ SWNS+++ + + N L LF+ M+
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
S +P+ VT +L +C+ LA L G+ +H Y ++ D + NA + M
Sbjct: 559 SE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM------DASLANAFITM 611
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG ++ A+ +F + + + SWN MI GYGM G+G++A F+ M + KP+ V+F
Sbjct: 612 YARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSF 671
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VLSACSHSG G + M +G+ P + HY C++D+LGR G +EA +MP
Sbjct: 672 ASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMP 731
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E + +WR LL++ ++ N L E ++ +LEP + GN++L+SNIY A G + EV+
Sbjct: 732 IEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQ 791
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR +R++ + K PG SWI + + +H F ++D HP+++ IY L+SLT+ +R+ G
Sbjct: 792 IRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDLG 847
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 220/437 (50%), Gaps = 12/437 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT L+ C + G IHS++ +I+ T+L++ Y KC + A VF
Sbjct: 61 ATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVE 120
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E ++ ++NA+ISG+ + + F M++ G+ P+ T L+ C +++ +
Sbjct: 121 MP-ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRL 179
Query: 153 VKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IHG + GL D+D Y+G+ALV Y++ + +VF + +R++V WNA++ G+
Sbjct: 180 GQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFL 238
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+G+ KAL+++ M EGI T+ V+ A G + G +H + +K + +
Sbjct: 239 NVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLF 298
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
++NAL++MY + + +F + D WNS+++ + G H + LF +M
Sbjct: 299 ILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLER 358
Query: 332 FQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D+ T + +L C+ L + GR +H + + +G+ D ++ NAL+ MY
Sbjct: 359 IKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIEL--------DAYLGNALLSMYV 410
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K + AQ VF KM DV SWN MI + +A ++F MCE+++K + T V
Sbjct: 411 KHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVS 470
Query: 451 VLSACSHSGFLSQGREF 467
+L+ C L GR
Sbjct: 471 LLAFCKDGSDLVFGRSI 487
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 179/346 (51%), Gaps = 12/346 (3%)
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
ND A L + M LG+ PD T P ++K C + A+ +IH + L L DV +
Sbjct: 40 NDHAI--LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRV 97
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G+ALV+ Y KC + EA KVF E+P RD+V WNA+++GY + +A+ +F M K G+
Sbjct: 98 GTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALIDMYGKGKCVGEAL 290
+ TV +L A M + G+ +HG ++ G +D V AL+ Y + V +
Sbjct: 158 TPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSH 216
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F +M ++I SWN+I+T G+ L+L+ ML G + D VT V+ AC+
Sbjct: 217 RVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYG 276
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G Q+H + L I+D+F+ NAL++MY+ GS+ + +F + D
Sbjct: 277 CLRLGMQLHQLAIKFNL--------INDLFILNALLNMYSDNGSLESSWALFNAVPTSDA 328
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A WN MI Y G EA+ +F M ++K D T +LS C+
Sbjct: 329 ALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 159/320 (49%), Gaps = 10/320 (3%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN+++ + ++ H L + +M GI T+ VL A + NG +H +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+ + V V AL+D Y K V EA ++F M E+D+ SWN++++ + C + +
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF M AG P+ T +L AC + L G++IHGY + NGL D ++
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDM-------DAYVG 200
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
AL+ Y + ++ + VF+ M +++ SWN +I G+ G +AL ++S M +K
Sbjct: 201 TALVGFYMRFDAVL-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIK 259
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
D VT + V+ AC+ G L G + L + ++ ++ + +++M G L ++
Sbjct: 260 FDAVTMLVVIQACAEYGCLRLGMQ-LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 503 LALAMPNEANPVVWRTLLAA 522
L A+P ++ +W +++++
Sbjct: 319 LFNAVPT-SDAALWNSMISS 337
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 290/492 (58%), Gaps = 10/492 (2%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + L+ C D A+ + +++H + K Y+ + L+ Y KC +E+A KV +E
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P ++VV W AM++ Y+Q G +AL VF M + + FT VL++ I G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +HG++VK YDS + V ++L+DMY K + EA EIFE + E+D+ S +I+ + Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L +F R+ S G P+ VT++++L A S LA L HG+Q H +++ L
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA--- 289
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ N+L+DMY+KCG++ A+ +F M ++ SWN M++GY G G+E L++F
Sbjct: 290 -----VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 435 CMC-EAKLKPDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLG 492
M E ++KPD VT + VLS CSH G F ++ YG P EHY C++DMLG
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG+++EA+E MP++ V +LL A R+H + D+ E +R+ ++EP + GNYV+
Sbjct: 405 RAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVI 464
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SN+Y + G++ +V ++R M Q+ V K PG SWI+ + LH F ++DR+HP + + A+
Sbjct: 465 LSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAK 524
Query: 613 LHSLTARLREHG 624
+ ++ ++++ G
Sbjct: 525 MKEISIKMKQAG 536
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 2/313 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L C + L+ GQ +H++M++T + + T L+ Y KC ++ A V + + E
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-E 115
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++ AMIS + + + L F M + P+++TF ++ C + K+I
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGL+ K D +++GS+L++ Y K ++EA ++FE LP RDVV A++ GYAQ+G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F R+ EG+ + T +L+AL + +G+ H V++ + N+L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPD 335
IDMY K + A +F+ M E+ SWN+++ + + G L LF M +PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 336 LVTFSTVLPACSH 348
VT VL CSH
Sbjct: 356 AVTLLAVLSGCSH 368
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 26/315 (8%)
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
E M+ G M +L+A + ++G+ VH ++K Y + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
GK C+ +A ++ + M EK++ SW ++++ + Q G+ L +F M+ + +P+ TF+
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
TVL +C + L G+QIHG IV + +F+ ++L+DMY K G +++A+
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSH--------IFVGSSLLDMYAKAGQIKEARE 209
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F + ++DV S +I GY G +EAL+MF + + P+ VT+ +L+A S
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 461 LSQG--------REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
L G R LP Y V+ +IDM + G L+ A L MP E
Sbjct: 270 LDHGKQAHCHVLRRELPF----YAVLQ-----NSLIDMYSKCGNLSYARRLFDNMP-ERT 319
Query: 513 PVVWRTLLAASRLHG 527
+ W +L HG
Sbjct: 320 AISWNAMLVGYSKHG 334
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 316/584 (54%), Gaps = 29/584 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ +E+H+ +++ + + LI+ +S C QM A+ VFN + +PNV YN +
Sbjct: 34 TDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQ-DPNVHLYNTL 92
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I N + K F M++ G+ D +T+P L+K C + V+ IH V K G
Sbjct: 93 IRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGF 152
Query: 166 DLDVYIGSALVNTYLKCQFM--EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
D+++ ++L+++Y KC + A+K+F E+ +D+V WN+M+ G + G+ +A ++F
Sbjct: 153 FGDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLF 212
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG--IVVKMGYDSGVPVMNALIDMYG 281
M++ V I+ G+ K G + + KM + V + ++ Y
Sbjct: 213 DEMAER---------DAVSWNTILDGYVKAGEMSQAFNLFEKMP-ERNVVSWSTMVSGYC 262
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + A +F+ M K++ +W I++ + G L+++M +AG +PD T +
Sbjct: 263 KTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLIS 322
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID---DVFMNNALMDMYTKCGSMRDA 398
+L AC+ L+ G+++H S K I V ++NAL+DMY KCG + A
Sbjct: 323 ILAACAESGLLVLGKKVHA-----------SIKKIRIKCSVNVSNALVDMYAKCGRVDKA 371
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F +MS +D+ SWN M+ G M G G++A+ +FS M + KPD+VT + +L AC+H+
Sbjct: 372 LSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHA 431
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
GF+ QG + ME +G+VP IEHY C+ID+LGR G+L EA+ L +MP E N V+W T
Sbjct: 432 GFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGT 491
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H LAE R+ LE GNY ++SNI+ A G + V ++R M+ V
Sbjct: 492 LLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGV 551
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+K G S IEL D +H F D+SHPE IY L L L++
Sbjct: 552 QKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQ 595
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 154/326 (47%), Gaps = 18/326 (5%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC--CQ 82
F +PF L C + L Q IH ++ + G SLI+ YSKC
Sbjct: 121 NFTYPFLLKACNG-------KGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCGLLG 173
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA+ +F + E ++ ++N+MI G + F+ M + + +K
Sbjct: 174 VNYAMKLFMEMG-EKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGYVK 232
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
E+ + L K+ + +V S +V+ Y K ME A +F+++P +++V
Sbjct: 233 AG-------EMSQAFNLFEKMP-ERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVT 284
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
W +++G+A+ G +A ++ +M G+ T+ +L+A G G+ VH +
Sbjct: 285 WTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIK 344
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
K+ V V NAL+DMY K V +AL IF M +D+ SWN ++ G+ + ++
Sbjct: 345 KIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQ 404
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSH 348
LF +M GF+PD VT +L AC+H
Sbjct: 405 LFSKMQQEGFKPDKVTLIAILCACTH 430
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T I+ L CA L G+++H+ + + I S +L++MY+KC ++ AL +FN
Sbjct: 318 GTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNE 377
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S ++ ++N M+ G + K + F+ M+Q G PDK T ++ C C ++
Sbjct: 378 MSMR-DLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAIL-CACTHAGFVD 435
Query: 153 --------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+++ HG+V ++ Y +++ + +EEA ++ + +P+ + V+W
Sbjct: 436 QGLSYFNSMERDHGIV----PHIEHY--GCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIW 489
Query: 204 NAMV 207
++
Sbjct: 490 GTLL 493
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 324/594 (54%), Gaps = 18/594 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSC 95
A LQ C +L+ G+ +H+ ++ +G + + + LI MYS C + A+ +F+ +
Sbjct: 22 APLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMP- 80
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
PN+ ++ ++SG N L F+ M + G++P ++ + + A +
Sbjct: 81 RPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQ 140
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H + +LG D ++++ S L + Y K + EA +VF+++P +D V W AM++GYA+ G
Sbjct: 141 LHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGN 200
Query: 216 FHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNG---RVVHGIVVKMGYDSGVP 271
A+ FR M +EG + + + VLSA G K+G R +H V+K G++ V
Sbjct: 201 LEAAVIAFRDMRREGLVGADQHVLCSVLSA---SGGLKDGWLARAIHSCVMKSGFEQEVA 257
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NAL DMY K + A + ++ + ++ S S++ + + + L +F +
Sbjct: 258 VRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQ 317
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P+ TFS+++ C+ A L G Q+H ++ L I D F+++ L+DMY
Sbjct: 318 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSL--------ISDSFVSSTLLDMYG 369
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG + + +F ++ +WN I G G+EA+ F M + ++P+ +TFV
Sbjct: 370 KCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVS 429
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L+ACSH+G + +G ++ M+ +G+ P EHY+C+IDM GRAG+L+EA + MP +
Sbjct: 430 LLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVK 489
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIR 570
N W +LL A R+ GN +L EIAA + +LEP + G +V +S IY + G++E+V +R
Sbjct: 490 PNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVR 549
Query: 571 HTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR ++K PG SW++ H F S D SHP+ + IY +L L R++E G
Sbjct: 550 KLMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEG 603
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/555 (33%), Positives = 307/555 (55%), Gaps = 10/555 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ + G+ +H +++ G D + +L++MY+K +K A VF+ + +
Sbjct: 134 ALKAAVRSADFGYGRRLHCDVVKAGGGDL-FVMNNLVDMYAKGGDLKNARKVFDRIP-DR 191
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ +M+SG N A +GL FN MRQ +LP +YT ++ C + ++ + + IH
Sbjct: 192 NVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIH 251
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K GL + +I +A+++ Y+KC E+A +VF+EL D+VLW M+ GY Q G
Sbjct: 252 GSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPL 311
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL +F I + T+ VLSA + GR +HGI VK+G VMNAL+
Sbjct: 312 DALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALV 371
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K K + +A IF + KD+ +WNS++ + + L LF M G PD +
Sbjct: 372 DMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAI 431
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ L AC L L+ G+ H Y V + N +++N AL+++Y KC +
Sbjct: 432 SVVNALSACVCLGDLLIGKCFHTYAVKHAFMSN--------IYVNTALLNLYNKCADLPS 483
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ VF++M+ ++ +W MI GYGM G ++D+F+ M + ++P+E F +LS CSH
Sbjct: 484 AQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSH 543
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G ++ G++ M + + P+++HY C++D+L RAG L EA E MP +A+ +W+
Sbjct: 544 TGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQ 603
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
L +LH + AE A R+ L P V+MSN+Y + G++++ L IR M+++
Sbjct: 604 AFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERG 663
Query: 578 VRKNPGCSWIELKDG 592
+ K PGCS + L++G
Sbjct: 664 LVKLPGCSSVGLENG 678
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 188/391 (48%), Gaps = 17/391 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L +G+ IH +++ G++ + ++++MY KC + + A VF+ L
Sbjct: 230 TMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDEL 289
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S ++ + MI G+ N L F + + ++P+ T ++ + +
Sbjct: 290 SFV-DLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLG 348
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IHG+ KLG + + +ALV+ Y KC+ + +A +F + +DVV WN+++ GYA+
Sbjct: 349 RSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAEN 408
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
AL +F M +G +V LSA + +G G+ H VK + S + V
Sbjct: 409 DMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVN 468
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+++Y K + A +F M +++ +W +++ + G+ G++ LF+ ML Q
Sbjct: 469 TALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQ 528
Query: 334 PDLVTFSTVLPACSHLAALMHGRQ----IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ F+++L CSH + G++ + Y + K+ +C ++D+
Sbjct: 529 PNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYAC-----------MVDVL 577
Query: 390 TKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+ G++ +A KM + D + W + G
Sbjct: 578 ARAGNLEEALEFIQKMPMQADTSIWQAFLHG 608
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 13/276 (4%)
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R +H ++ G G+ L+ Y + A + + D +++ + H
Sbjct: 45 RALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAA 104
Query: 315 GNHDGTLRLFD--RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G H + + R Q D+V S L A A +GR++H +V G
Sbjct: 105 GRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGG---- 160
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D+F+ N L+DMY K G +++A+ VF ++ ++V SW M+ G +G KE L +
Sbjct: 161 -----DLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVL 215
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F+ M + + P E T VL AC+ G L QGR + ++G+V ++DM
Sbjct: 216 FNEMRQESILPSEYTMASVLMACTMLGSLHQGR-LIHGSVMKHGLVSNHFITAAMLDMYV 274
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ G+ +A ++ + + + V+W T++ +G+
Sbjct: 275 KCGEAEDARQVFDEL-SFVDLVLWTTMIVGYTQNGS 309
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/584 (31%), Positives = 317/584 (54%), Gaps = 32/584 (5%)
Query: 52 QEIHSYMLRTGII--DSPLSITSLINMYSKCCQMKYALFVFNNLSCE---PNVFTYNAMI 106
++IH +L + I L ++ L+ + Q +YA L C+ P++ +++++
Sbjct: 19 KQIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYA----RRLLCQIQTPSIQLWDSLV 74
Query: 107 SGFYSNDFAFKGLDF--FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-----KIHGL 159
F + L F + MR+ GV+P ++TFP L+K AV +++ + H
Sbjct: 75 GHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLK------AVFKLRDANPFQFHAH 128
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
+ K G D D+++ ++L++ Y C E +VF+ +DVV W AM++G+ + +A
Sbjct: 129 ILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEA 188
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNALID 278
+ F M + G+ + TV VL A + GR +HG ++ G V + ++L+D
Sbjct: 189 MTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVD 248
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK C +A ++F+ M +++ +W +++ + Q + + +F+ ML + P+ T
Sbjct: 249 MYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKT 308
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
S+VL AC+H+ AL GR++H Y++ N + N + + L+D Y KCG + +A
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYVIKNSIEINTT--------VGTTLIDFYAKCGCLEEA 360
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+VF ++ +K+V +W MI G+ G A+D+F M + + P+EVTF+ VLSAC+H
Sbjct: 361 ILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHG 420
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +GR M+ R+ + P +HY C++D+ GR G L EA L MP E VW
Sbjct: 421 GLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGA 480
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
L + +H + +L + AA RV +L+P H G Y L++N+Y +++V +R M+ Q V
Sbjct: 481 LFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQV 540
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHP-EAKSIYAELHSLTARLR 621
K+PGCSWIE+K LH FI+ D P E+ +Y L ++ ++R
Sbjct: 541 VKSPGCSWIEVKGKLHEFIAFDDKKPLESDDLYKTLDNVGVQMR 584
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CAH L +G+ +H Y+++ I + T+LI+ Y+KC ++ A+ VF L
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERL 367
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV+T+ AMI+GF ++ +A +D F+ M V P++ TF ++ C V E
Sbjct: 368 R-EKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEG 426
Query: 154 KKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
+++ + F L D Y + +V+ + + +EEA + E +P+ +W A+
Sbjct: 427 RRLFLSMKERFNLEPKADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGAL 481
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 320/574 (55%), Gaps = 12/574 (2%)
Query: 53 EIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++ + +++ G DS L + +L++ Y K ++ A +F + E + +YNAMI+G+
Sbjct: 170 QVQTQIIKLGY-DSRLIVGNTLVDSYCKSNRLDLACQLFKEMP-EIDSVSYNAMITGYSK 227
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ K ++ F M+ G+ P ++TF ++ + ++ ++IH V K +V++
Sbjct: 228 DGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFV 287
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL++ Y K + +A K+F+E+P +D V +N +++GYA G+ A ++FR +
Sbjct: 288 SNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAF 347
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+F +LS ++ GR +H + DS + V N+L+DMY K EA
Sbjct: 348 DRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 407
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
IF + + W ++++ + Q G ++ L+LF++M A D TF+++L A + +A+
Sbjct: 408 IFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+Q+H +I+ +G N VF +AL+D+Y KCGS++DA F +M +++
Sbjct: 468 LSLGKQLHSFIIKSGFMSN--------VFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIV 519
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN MI Y +G+ + L F M + L+PD V+F+GVLSACSHSG + +G M
Sbjct: 520 SWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSM 579
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
Y + P EHY V+DML R+G+ NEA +L MP + + ++W ++L A R+H N +L
Sbjct: 580 TQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQEL 639
Query: 532 AEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
A AA ++F +E YV MSNIY A G++E V + MR + V+K P SW+E+K
Sbjct: 640 ARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIK 699
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F ++DR HP+ + I ++ LT + E G
Sbjct: 700 HETHMFSANDRCHPQIEEIRKKIDMLTKTMEELG 733
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/463 (27%), Positives = 227/463 (49%), Gaps = 11/463 (2%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +I+ Y K + A +F+ + E T+ +I G+ + + + F M++
Sbjct: 84 VSTNMMISGYVKSGNLGEARKLFDGM-VERTAVTWTILIGGYSQLNQFKEAFELFVQMQR 142
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G PD TF L+ C ++ ++ + KLG D + +G+ LV++Y K ++
Sbjct: 143 CGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDL 202
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+E+P D V +NAM+ GY++ G KA+ +F M G+ + FT VL A I
Sbjct: 203 ACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIG 262
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ G+ +H V+K + V V NAL+D Y K V +A ++F+ M E+D S+N I
Sbjct: 263 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVI 322
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
++ + G H LF + F F+T+L S+ GRQIH +V
Sbjct: 323 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 382
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
++ + N+L+DMY KCG +A+M+FT ++ + W MI Y G +
Sbjct: 383 DS--------EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
E L +F+ M +A + D+ TF +L A + LS G++ + + G + + + +
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI-IKSGFMSNVFSGSAL 493
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+D+ + G + +A + MP+ N V W +++A +G +
Sbjct: 494 LDVYAKCGSIKDAVQTFQEMPDR-NIVSWNAMISAYAQNGEAE 535
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 161/305 (52%), Gaps = 1/305 (0%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ+IHS++++T + + +L++ YSK + A +F+ + E + +YN +ISG+
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISGYA 327
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ D F ++ ++ F ++ + + ++IH D ++
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G++LV+ Y KC EEA +F L R V W AM++ Y Q G + + L++F +M +
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T +L A + G+ +H ++K G+ S V +AL+D+Y K + +A+
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAV 507
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ F+ M +++I SWN++++ + Q G + TL+ F M+ +G QPD V+F VL ACSH
Sbjct: 508 QTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSG 567
Query: 351 ALMHG 355
+ G
Sbjct: 568 LVEEG 572
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 211/491 (42%), Gaps = 94/491 (19%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG--- 209
V I + K G D D + V +LK + +A ++FE++P ++ V N M++G
Sbjct: 36 VNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVK 95
Query: 210 ----------------------------YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
Y+Q+ +F +A E+F +M + G T +
Sbjct: 96 SGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTL 155
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
LS V ++K+GYDS + V N L+D Y K + A ++F+ M E D
Sbjct: 156 LSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDS 215
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
S+N+++T + + G + + LF M ++G +P TF+ VL A L ++ G+QIH +
Sbjct: 216 VSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSF 275
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ N VF++NAL+D Y+K S+ DA+ +F +M ++D S+N++I GY
Sbjct: 276 VIKTNFVWN--------VFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 327
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
DG+ K A D+F + + F +LS S++ GR+ +V T
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQI-----HAQTIVTTA 382
Query: 482 EHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
+ V +DM + G+ EA E+ + V W +++A
Sbjct: 383 DSEILVGNSLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMISA--------------- 426
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV-----------RKNPGCSW 586
YV G YEE L + + MRQ +V R + +
Sbjct: 427 -------------------YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIAS 467
Query: 587 IELKDGLHTFI 597
+ L LH+FI
Sbjct: 468 LSLGKQLHSFI 478
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 153/303 (50%), Gaps = 8/303 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF IAS L + + G++IH+ + T L SL++MY+KC + + A
Sbjct: 353 PFATMLSIASNTL-----DWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEM 407
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F NL+ V + AMIS + F +GL FN MRQ V+ D+ TF L++ +
Sbjct: 408 IFTNLTHRSAV-PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIA 466
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++ K++H + K G +V+ GSAL++ Y KC +++A++ F+E+P R++V WNAM++
Sbjct: 467 SLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMIS 526
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYD 267
YAQ GE L+ F+ M G+ + GVLSA G + G + ++ D
Sbjct: 527 AYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLD 586
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+++DM + EA ++ EM + D W+S++ N + R D+
Sbjct: 587 PRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQ 646
Query: 327 MLS 329
+ +
Sbjct: 647 LFN 649
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/589 (31%), Positives = 327/589 (55%), Gaps = 15/589 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +G ++H+ + G + LI+MY KC ++ A VF+ + E N
Sbjct: 11 LRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRM-LERN 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A++ G+ A L M GV P+++TF +K C + V +IHG
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K G + +G+A ++ Y KC + A +VF ++P R++V WNAM+ G+ G K
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP--VMNAL 276
+L +F+RM +G FT T L A +G + G +H ++ G+ + + +A+
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+D+Y K + EA ++F+ +E+K++ SW++++ Q GN + LF ++ + D
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDG 309
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
S ++ + LA + G+Q+H YI V +GL D+ + N+++DMY KCG
Sbjct: 310 FVLSIMMGVFADLALVEQGKQMHCYILKVPSGL----------DISVANSIIDMYLKCGL 359
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+A+ +F++M ++V SW +MI GYG G G++A+ +F+ M ++ DEV ++ +LSA
Sbjct: 360 TEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSA 419
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSHSG + + +E+ + + + + P IEHY C++D+LGRAGQL EA L M + N
Sbjct: 420 CSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEG 479
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W+TLL+A R+HGN ++ + +F+++ + NYV+MSNIY G ++E +R ++
Sbjct: 480 IWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVK 539
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ ++K G SW+E+ +H F D +HP + I+ L + R++E
Sbjct: 540 AKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEE 588
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 313/578 (54%), Gaps = 15/578 (2%)
Query: 53 EIHSYMLRTG-IIDSPLSITSLINMYSKCCQM-KYALFVFNNLSCEPNVFT--YNAMISG 108
++H+ ++++G + S S SL+ + + YA+ +F L P + T YN ++
Sbjct: 34 QLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFR-LGPRPPLSTPCYNVLMRA 92
Query: 109 FYSNDFAFKGLDFFNHMRQLGVL--PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
F L F M D++T C +K C + A+ + + K GL
Sbjct: 93 FLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLV 152
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
D ++ S+L++ Y C + A VF+ VV+WNA+V Y + G++ + +E+F+ M
Sbjct: 153 ADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGM 212
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ G+ T+ V++A +G K G+ V G V + G ++ AL+DMY K +
Sbjct: 213 LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEI 272
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
G+A +F+ M+ +D+ +W+++++ + Q L LF M A +P+ VT +VL AC
Sbjct: 273 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSAC 332
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ L AL G+ +H Y+ L+ + AL+D Y KCG + DA F M
Sbjct: 333 AVLGALETGKWVHSYVRRKRLSLT--------TILGTALVDFYAKCGCIDDAVEAFESMP 384
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
K+ +W +I G +G+G+EAL++FS M EA ++P +VTF+GVL ACSHS + +GR
Sbjct: 385 VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRR 444
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M YG+ P +EHY C++D+LGRAG ++EAY+ MP E N V+WR LL++ +H
Sbjct: 445 HFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVH 504
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
N + E A +++ L P H G+YVL+SNIY + G++++ +R M+ + + K PGCS
Sbjct: 505 RNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSL 564
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IEL + F + D HPE + IY ++ + R++ G
Sbjct: 565 IELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAG 602
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 168/329 (51%), Gaps = 1/329 (0%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T +L+ C+ L G+ + +Y ++ G++ ++SLI+MY+ C + A
Sbjct: 117 PADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARL 176
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ E V +NA+++ + N + ++ F M ++GV D+ T ++ C +
Sbjct: 177 VFDAAE-ESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIG 235
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
K + G V + GL + + +AL++ Y KC + +A ++F+ + RDVV W+AM++
Sbjct: 236 DAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMIS 295
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY Q + +AL +F M + + T+ VLSA ++G + G+ VH V +
Sbjct: 296 GYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSL 355
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ AL+D Y K C+ +A+E FE M K+ ++W +++ G L LF M
Sbjct: 356 TTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMR 415
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
AG +P VTF VL ACSH + GR+
Sbjct: 416 EAGIEPTDVTFIGVLMACSHSCLVEEGRR 444
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 8/299 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T ++ + C + + G+ + ++ G+ +P +T+L++MY+KC ++ A +
Sbjct: 219 FDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRL 278
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++AMISG+ D + L F+ M+ V P+ T ++ C V+
Sbjct: 279 FDGMQSR-DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACA-VLG 336
Query: 150 VLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
LE K +H V + L L +G+ALV+ Y KC +++A++ FE +P+++ W A++
Sbjct: 337 ALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 396
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-VHGIVVKMGYD 267
G A G +ALE+F M + GI + T GVL A + GR + G
Sbjct: 397 GMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIK 456
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT---VHEQCGNHDGTLR 322
V ++D+ G+ V EA + M E + W ++++ VH G + L+
Sbjct: 457 PRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 321/579 (55%), Gaps = 12/579 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C+ LQ G+ +H M G + + + ++I+M++KC ++ A +F + +
Sbjct: 140 LKACSSLHALQLGRWVHETM--HGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMP-DR 196
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ ++ A+I G N + L F MR G++PD ++ C + AV +
Sbjct: 197 DLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQ 256
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ G + D+Y+ +A+++ Y KC EA +VF + DVV W+ ++ GY+Q +
Sbjct: 257 VCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQ 316
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ +++ M G+ + T VL AL + K G+ +H V+K G S V V +ALI
Sbjct: 317 ESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALI 376
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + EA IFE +KDI WNS++ + G+ + F R+ A +P+ +
Sbjct: 377 VMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFI 436
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T ++LP C+ + AL G++IHGY+ +GL N V + N+L+DMY+KCG +
Sbjct: 437 TVVSILPICTQMGALRQGKEIHGYVTKSGLGLN--------VSVGNSLIDMYSKCGFLEL 488
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
+ VF +M ++V ++N MI G GQG++ L + M E +P++VTF+ +LSACSH
Sbjct: 489 GEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSH 548
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G L +G M + YG+ P +EHY+C++D++GRAG L+ AY+ MP + V+
Sbjct: 549 AGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFG 608
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+LL A RLH +L E+ A+R+ QL+ G+YVL+SN+Y +G ++E++ +R ++ +
Sbjct: 609 SLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKG 668
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
+ K PG SWI++ ++ F ++ HP I L+SL
Sbjct: 669 LEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSL 707
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 142/509 (27%), Positives = 254/509 (49%), Gaps = 17/509 (3%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-----LINMYSKCC 81
H + + S NL + + +H+ +L G +S L+N+Y
Sbjct: 22 QHSLPIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFG 81
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
+++A F L +P + +NA++ G + K + F++ M Q GV PD YT+P ++
Sbjct: 82 SLQHAFLTFRALPHKP-IIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVL 140
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K C + A+ + +H + +VY+ A+++ + KC +E+A ++FEE+P RD+
Sbjct: 141 KACSSLHALQLGRWVHETMHG-KTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLA 199
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W A++ G GE +AL +FR+M EG+ V +L A + K G +
Sbjct: 200 SWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCA 259
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
V+ G++S + V NA+IDMY K EA +F M D+ SW++++ + Q + +
Sbjct: 260 VRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESY 319
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
+L+ M++ G + + ++VLPA L L G+++H +++ GL + DV +
Sbjct: 320 KLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGL--------MSDVVV 371
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL+ MY CGS+++A+ +F S KD+ WN MI+GY + G + A F + A+
Sbjct: 372 GSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH 431
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
+P+ +T V +L C+ G L QG+E + ++ G+ + +IDM + G L E
Sbjct: 432 RPNFITVVSILPICTQMGALRQGKEIHGYV-TKSGLGLNVSVGNSLIDMYSKCGFL-ELG 489
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTD 530
E N + T+++A HG +
Sbjct: 490 EKVFKQMMVRNVTTYNTMISACGSHGQGE 518
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 193/410 (47%), Gaps = 18/410 (4%)
Query: 152 EVKKIHGLVFKLGL-----DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
E + +H L+ LG S LVN Y+ ++ A F LP + ++ WNA+
Sbjct: 45 EARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAI 104
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ G +G F KA+ + M + G+ +T VL A + + GR VH +
Sbjct: 105 LRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKT 163
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V V A+IDM+ K V +A +FE M ++D+ SW +++ G L LF +
Sbjct: 164 KANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRK 223
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M S G PD V +++LPAC L A+ G + V +G D++++NA++
Sbjct: 224 MRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFE--------SDLYVSNAVI 275
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG +A VF+ M DV SW+ +I GY + +E+ ++ M L + +
Sbjct: 276 DMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAI 335
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
VL A L QG+E + + G++ + + +I M G + EA E
Sbjct: 336 VATSVLPALGKLELLKQGKEMHNFV-LKEGLMSDVVVGSALIVMYANCGSIKEA-ESIFE 393
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
++ + +VW +++ L G+ + A +R++ E H N++ + +I
Sbjct: 394 CTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAE--HRPNFITVVSI 441
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 312/592 (52%), Gaps = 16/592 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYML--RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
IA L C++ L G++IHS +L R ++S ++ T L++MY KC + A VF +
Sbjct: 441 IAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA-TMLVSMYGKCGSIAEAELVFKEM 499
Query: 94 SCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ T+N M+ + ND + + M Q GVLPD +F ++ C E
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQE 556
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ + + + G + +AL++ + +C+ +E+A VF+E+ DVV W AMV+ A+
Sbjct: 557 AQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAE 615
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+F + +FRRM EG+ +FT+ L + G+++H V ++G ++ + V
Sbjct: 616 NRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAV 675
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL++MY EAL FE M+ +D+ SWN + + Q G + LF M G
Sbjct: 676 ENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGV 735
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD +TFST L A + G+ HG +GL DV + L+ +Y KC
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDS--------DVSVATGLVKLYAKC 787
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + +A +F + V N +I G +EA+ MF M + ++PD T V ++
Sbjct: 788 GKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSII 847
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC H+G + +G M+ +G+ PT+EHY C +D+LGRAGQL A ++ MP E N
Sbjct: 848 SACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDN 907
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+VW +LL +L G+ +L E AQR+ +L+P + +V++SNIY A GK+++ R
Sbjct: 908 TLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKK 967
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ QNV+ PG SW+E+ +H F++ DRSHP+ IY L L +R G
Sbjct: 968 LLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAG 1019
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 257/516 (49%), Gaps = 37/516 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT----SLINMYSKCCQMKYALFV 89
T +A L CA+ +L G+ IH+ + G+ + T ++INMY+KC + A+ V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAF--KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F + E +V ++ AM +G Y+ + F L F M + P+ TF + C
Sbjct: 189 FLTIP-EKDVVSWTAM-AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--- 243
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR---DVVLWN 204
++ + +H L+ + GL D G+AL+N Y KC E A VF+ + R D+V WN
Sbjct: 244 TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWN 303
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF-FKNGRVVHGIVVK 263
AM++ + G A+ +FRR+ EG+ + T+ +L+AL G F R HG + +
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWE 363
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLR 322
GY V V NA+I MY K A +F + K D+ SWN+++ E + +
Sbjct: 364 SGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
F ML AG P+ V+F +L ACS+ AL GR+IH I+ +D + +
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR-------RDYVESSVA 476
Query: 383 NALMDMYTKCGSMRDAQMVFTKM--SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
L+ MY KCGS+ +A++VF +M + + +WN+M+ Y + + KEA M +
Sbjct: 477 TMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPL--MESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ PD ++F VLS+C + SQ + L + +ES Y +E T +I M GR +L
Sbjct: 537 VLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYRSA-CLE--TALISMHGRCRELE 589
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+A + M + + V W +++A+ N D E+
Sbjct: 590 QARSVFDEM-DHGDVVSWTAMVSAT--AENRDFKEV 622
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 253/522 (48%), Gaps = 40/522 (7%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
SG + L A LQ C +L KG+ H + G+ LINMY +C
Sbjct: 14 SGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRC 73
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMI-----SGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
++ A +F+ + E NV ++ A+I SG ++ FA F + + P+ Y
Sbjct: 74 GSLEEAHAIFSKME-ERNVVSWTALISANAQSGAFARAFAL----FRTMLLESSAAPNSY 128
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD----VYIGSALVNTYLKCQFMEEALKV 191
T ++ C + + + IH ++++LGL+ + +G+A++N Y KC E+A+ V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
F +P +DVV W AM YAQ F+ AL +FR M + + + T L A +
Sbjct: 189 FLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL-- 246
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM---EEKDIFSWNSI 307
++G +H ++ + G NALI+MYGK A +F+ M +E D+ SWN++
Sbjct: 247 -RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAM 305
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA----LMHGRQIHGYIV 363
++ + G H + +F R+ G +P+ VT T+L A LAA R+ HG I
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA---LAASGVDFGAARKFHGRIW 362
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGM 422
+G + DV + NA++ MY KCG A VF ++ K DV SWN M LG
Sbjct: 363 ESGYLR--------DVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTM-LGASE 413
Query: 423 DGQG-KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
D + + ++ F M A + P++V+F+ +L+ACS+S L GR+ L+ +R
Sbjct: 414 DRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVES 473
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAA 522
T ++ M G+ G + EA + MP + +V W +L A
Sbjct: 474 SVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 226/466 (48%), Gaps = 16/466 (3%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVF 100
L A + ++ H + +G + + ++I+MY+KC A VF + + +V
Sbjct: 344 LAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVI 403
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++N M+ K ++ F+HM G+ P+K +F ++ C + A+ +KIH L+
Sbjct: 404 SWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLI 463
Query: 161 FKLGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFH 217
D ++ + + LV+ Y KC + EA VF+E+PL R +V WN M+ YAQ
Sbjct: 464 LTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSK 523
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A M + G+ + T VLS+ + +V+ +++ GY S + ALI
Sbjct: 524 EAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGYRSAC-LETALI 579
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
M+G+ + + +A +F+ M+ D+ SW ++++ + + LF RM G PD
Sbjct: 580 SMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKF 639
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +T L C L G+ IH + GL D+ + NAL++MY+ CG R+
Sbjct: 640 TLATTLDTCLDSTTLGLGKIIHACVTEIGLEA--------DIAVENALLNMYSNCGDWRE 691
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F M +D+ SWNIM Y G KEA+ +F M +KPD++TF L+
Sbjct: 692 ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
S +S G+ F L + G+ + T ++ + + G+L+EA L
Sbjct: 752 SALVSDGKLFHGL-AAESGLDSDVSVATGLVKLYAKCGKLDEAISL 796
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 201/402 (50%), Gaps = 24/402 (5%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D + L++ C D + + K+ H L+ GL+ +++G+ L+N Y++C +EEA +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFF 251
++ R+VV W A+++ AQ G F +A +FR M E + +T+ +L+A
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 252 KNGRVVHGIVVKMGYD----SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
GR +H ++ ++G + + V NA+I+MY K +A+ +F + EKD+ SW ++
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAM 203
Query: 308 MTVHEQCGN-HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+ Q + LR+F ML P+++TF T L AC+ +L G +H + G
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAG 260
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK---DVASWNIMILGYGMD 423
L D NAL++MY KCG A VF M+ + D+ SWN MI
Sbjct: 261 LGF--------DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEA 312
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF-LSQGREFL-PLMESRYGVVPTI 481
G+ +A+ +F + ++P+ VT + +L+A + SG R+F + ES Y + +
Sbjct: 313 GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGY--LRDV 370
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
+I M + G + A+ + + + + + W T+L AS
Sbjct: 371 VVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGAS 412
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 229/539 (42%), Gaps = 33/539 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I +L C T+L+ G +HS + G+ PL+ +LINMY KC + A VF +
Sbjct: 235 TFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAM 291
Query: 94 SC--EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC-CCDVMAV 150
+ E ++ ++NAMIS + F +R G+ P+ T ++ +
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
+K HG +++ G DV +G+A+++ Y KC F A VF + + DV+ WN M+
Sbjct: 352 GAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-- 267
F K + F M GI ++ + +L+A GR +H +++ D
Sbjct: 412 SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471
Query: 268 -SGVPVMNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
S V M L+ MYGK + EA +F+ M + + +WN ++ + Q
Sbjct: 472 ESSVATM--LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGAL 529
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
ML G PD ++F++VL +C + + I+ +G +C + A
Sbjct: 530 MEMLQGGVLPDALSFTSVLSSCY---CSQEAQVLRMCILESGY--RSAC-------LETA 577
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ M+ +C + A+ VF +M DV SW M+ + KE +F M + PD
Sbjct: 578 LISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPD 637
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+ T L C S L G+ + + G+ I +++M G EA
Sbjct: 638 KFTLATTLDTCLDSTTLGLGK-IIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFF 696
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ--RVFQLEPGHCGNYVLMSNIYVAGG 561
M + V W + AA + LA+ A R QLE + + V+GG
Sbjct: 697 ETMKAR-DLVSWNIMSAA---YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 309/589 (52%), Gaps = 42/589 (7%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-R 126
S +L+ YSK + F L V T+N +I G+ + + +N M R
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY------- 179
+ T ++K V K+IHG V KLG + + +GS L+ Y
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 180 ------------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
L C +E+AL++F + +D V W AM+ G AQ G
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGL 250
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A+E FR M +G+ M ++ VL A +G G+ +H +++ + + V +A
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LIDMY K KC+ A +F+ M++K++ SW +++ + Q G + +++F M +G PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T + AC+++++L G Q HG + +GL I V ++N+L+ +Y KCG +
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGL--------IHYVTVSNSLVTLYGKCGDI 422
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D+ +F +M+ +D SW M+ Y G+ E + +F M + LKPD VT GV+SAC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S +G + +G+ + LM S YG+VP+I HY+C+ID+ R+G+L EA MP + +
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W TLL+A R GN ++ + AA+ + +L+P H Y L+S+IY + GK++ V +R MR+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+NV+K PG SWI+ K LH+F + D S P IYA+L L ++ ++G
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNG 651
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 199/426 (46%), Gaps = 41/426 (9%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK---- 79
+ F+ T T + L+L + ++ G++IH +++ G L + L+ MY+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 80 ---------------------------CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
C ++ AL +F + E + ++ AMI G N
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM--EKDSVSWAAMIKGLAQN 248
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
A + ++ F M+ G+ D+Y F ++ C + A+ E K+IH + + +Y+G
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SAL++ Y KC+ + A VF+ + ++VV W AMV GY Q G +A+++F M + GI
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+T+ +SA + + G HG + G V V N+L+ +YGK + ++ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M +D SW ++++ + Q G T++LFD+M+ G +PD VT + V+ ACS +
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVA 411
G++ + ++ G I + ++D++++ G + +A M D
Sbjct: 489 EKGQRYFKLMT----SEYGIVPSIGHY---SCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 412 SWNIMI 417
W ++
Sbjct: 542 GWTTLL 547
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 154/311 (49%), Gaps = 20/311 (6%)
Query: 14 CFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
CF G + +PF + L C + +G++IH+ ++RT D ++L
Sbjct: 257 CFREMKVQGLKMDQYPFG-----SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
I+MY KC + YA VF+ + + NV ++ AM+ G+ A + + F M++ G+ PD
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
YT I C +V ++ E + HG GL V + ++LV Y KC ++++ ++F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+ +RD V W AMV+ YAQ G + +++F +M + G+ T+TGV+SA G +
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 254 GRVV-------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWN 305
G+ +GIV +G+ S +ID++ + + EA+ M D W
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYS------CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 306 SIMTVHEQCGN 316
++++ GN
Sbjct: 545 TLLSACRNKGN 555
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
++F N L+ Y+K G + + + F K+ +D +WN++I GY + G A+ ++ M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 438 -EAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ VT + +L S +G +S G++
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/587 (34%), Positives = 310/587 (52%), Gaps = 32/587 (5%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G + H+ ++T +SLINMY K M A VF+ + E N ++ +ISG+
Sbjct: 132 GLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP-ERNTVSWATIISGYA 190
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
AF+ + F MR+ DK+ + ++ V K+IH L K GL
Sbjct: 191 MERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIAS 250
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ALV Y KC +++A K FE +D + W+AM+ GYAQ G+ H+AL +F M G
Sbjct: 251 VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNG 310
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT GV++A +G + G+ +HG +K GY+ + + K + +A
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDAR 370
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ F+ ++E DI W S RM P +T ++VL ACS LA
Sbjct: 371 KGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLA 412
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH + G + +V + +AL MY KCGS+ D +VF +M +D+
Sbjct: 413 ALEQGKQIHAQTIKYGFSL--------EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDI 464
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+WN MI G +G+G +AL++F + KPD VTFV VLSACSH G + +G+ + +
Sbjct: 465 MTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRM 524
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +G++P +EHY C++D+L RAG+L+E E + + +WR LL A R + N +
Sbjct: 525 MLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYE 584
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L A +++ +L Y+L+S+IY A G+ ++V +R M+ + V K PGCSWIELK
Sbjct: 585 LGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELK 644
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREH-GDCCAGTLFDSDS 636
+H F+ D+ HP+ I +EL RLR+H D C + D++S
Sbjct: 645 SQVHVFVVGDQIHPQIVKICSELR----RLRDHMKDECYESFNDTNS 687
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 238/490 (48%), Gaps = 35/490 (7%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C Q +LQKG+ IH+ +LRTG S SL+N+Y+KC + A VF +++ +V +
Sbjct: 20 CTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT-NKDVVS 78
Query: 102 YNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+N +I+G+ ++F ++ F MR LP+ +TF + + H
Sbjct: 79 WNCLINGYSQKGTVGYSFV-MELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHA 137
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K DV++GS+L+N Y K M +A KVF+ +P R+ V W +++GYA +
Sbjct: 138 LAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFE 197
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A E+F M +E +F T VLSAL + G+ +H + +K G S V NAL+
Sbjct: 198 AWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVT 257
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK C+ +A + FE+ +KD +W++++T + Q G+ L LF M G +P T
Sbjct: 258 MYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFT 317
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F V+ ACS + AL G+QIHGY + G C+ ++ + KCGS+ DA
Sbjct: 318 FVGVINACSDIGALEEGKQIHGYSLKAGY----ECQ----IYFRKGFDYLKAKCGSLVDA 369
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC-MCEAKLKPDEVTFVGVLSACSH 457
+ F + + D+ W SC M ++ P E+T VL ACS
Sbjct: 370 RKGFDYLKEPDIVLWT-------------------SCRMQMERIMPHELTMASVLRACSS 410
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L QG++ + +YG + + + M + G L + + MP+ + + W
Sbjct: 411 LAALEQGKQ-IHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-DIMTWN 468
Query: 518 TLLAASRLHG 527
+++ +G
Sbjct: 469 AMISGLSQNG 478
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 169/337 (50%), Gaps = 10/337 (2%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P +F L+ C + + K IH + + G VY+ ++LVN Y KC + +A V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 192 FEELPLRDVVLWNAMVNGYAQIGE--FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
FE + +DVV WN ++NGY+Q G + +E+F+RM E + T +GV +A
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G H + +K V V ++LI+MY K C+ +A ++F+ + E++ SW +I++
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ LF M D +++VL A + + +G+QIH + NGL
Sbjct: 188 GYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLS 247
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
S + NAL+ MY KCG + DA F KD +W+ MI GY G EA
Sbjct: 248 IAS--------VGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEA 299
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
L++F M KP E TFVGV++ACS G L +G++
Sbjct: 300 LNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQ 336
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 337/635 (53%), Gaps = 35/635 (5%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRT------ 61
I P S + F +++ NH A + L LC NL G IH+ +++
Sbjct: 15 IKPPHSQYLFPSTT-KSLLNH----ADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDF 69
Query: 62 -GIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAF 116
G + L I SL++MYSKC + + A VF+ + V ++N MISGF N D +F
Sbjct: 70 DGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTV-SWNTMISGFLRNGDFDTSF 128
Query: 117 KGLDFFNHMRQLGVLP---DKYTFPCLIKCCCDV---MAVLEVKKIHGLVFKLGLDLDVY 170
K FF M + + DK T ++ C + ++ + IHGLVF G + ++
Sbjct: 129 K---FFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREIT 185
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+AL+ +Y KC+ + KVF+E+ R+VV W A+++G AQ + +L +F +M G
Sbjct: 186 VGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCG 245
Query: 231 -IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
+ + T L A + ++G+ +HG++ K+G S + + +AL+D+Y K + A
Sbjct: 246 SVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAA 305
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+IFE EE D S I+ Q G + +++F +M++ G + D S VL
Sbjct: 306 WQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVG 365
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
L G+QIH I+ +N F+ N L++MY+KCG + D+ +VF +M++K+
Sbjct: 366 TYLALGKQIHSLIIKKNFCENP--------FVGNGLVNMYSKCGDLSDSLLVFYQMTQKN 417
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SWN +I + G G +AL + M + P +VTF+ +L ACSH+G + +G E L
Sbjct: 418 SVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLE 477
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M + +G+ P EHY CV+DMLGRAG LNEA + +P +VW+ LL A +HG++
Sbjct: 478 SMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDS 537
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
++ + AA R+F P YVLM+NIY + G ++E M++ V K G SWIE+
Sbjct: 538 EMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEI 597
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +++F+ D+ HPEA I+ L L L++ G
Sbjct: 598 EKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDEG 632
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 312/586 (53%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y+K + +A+ F +++ E +V ++N MI+ + + L M + GV
Sbjct: 209 SMLAGYAKLYGIDHAIEYFEDMA-ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SAL+ Y KC +EA +V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W ++ G Q F K++E+F +M E + + +F + ++S
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G++ + V N+LI +Y K + A +F M E+DI SW S++T +
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLS-AGFQPDLVT 338
Q GN DG L+++ MLS PD VT
Sbjct: 448 SQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG-LKMYSAMLSQKDVTPDWVT 506
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ + A G QI G+ V GL N V + NA + MY+KCG + +A
Sbjct: 507 YVTLFRGCADIGANKLGDQIIGHTVKAGLILN--------VSVANAAITMYSKCGRISEA 558
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q +F ++ KDV SWN MI GY G GK+A F M KPD +++V VLS CSHS
Sbjct: 559 QKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHS 618
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M +G+ P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 619 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 678
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+L++ IY GK ++ +R MR + +
Sbjct: 679 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 738
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+++ +H F + D SHP+ +I +L L ++ G
Sbjct: 739 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLG 784
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 131/585 (22%), Positives = 246/585 (42%), Gaps = 105/585 (17%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C + L + +H ++ G+ + +L++ Y C + A + EP
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEP 69
Query: 98 NVFTYNAMI-------------------------------SGFYSNDFAFKGLDFFNHMR 126
NV T+N M+ SG++ GL+ F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 127 QLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF- 184
+ G LP+ +TF C++K C + ++ GL +K D + +ALV+ +++C +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 185 ------------------------------MEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++ A++ FE++ RDVV WN M+ +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL + M ++G+ + T T L+A + G+ +H V++ V +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
ALI++Y K EA +F +++++ SW ++ Q ++ LF++M +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D +T++ C + L GRQ+H + +G + + ++N+L+ +Y KCG
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA--------IVVSNSLISLYAKCGD 421
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGY--------------GMD----------------- 423
+++A+ VF+ MS++D+ SW MI Y GMD
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQH 481
Query: 424 GQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G ++ L M+S M K + PD VT+V + C+ G G + + + G++ +
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVS 540
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
I M + G+++EA +L + N + V W ++ HG
Sbjct: 541 VANAAITMYSKCGRISEAQKL-FDLLNGKDVVSWNAMITGYSQHG 584
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 55/424 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA +L G+++H+ ++R+ P ++LI +Y+KC K A VFN+L
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N ++ +I G + K ++ FN MR + D++ LI C + M +
Sbjct: 332 Q-DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G + + + ++L++ Y KC ++ A VF + RD+V W +M+ Y+QI
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 450
Query: 214 GEFHKALEVFRRM--------------------------------SKEGIWMSRFTVTGV 241
G KA E F M S++ + T +
Sbjct: 451 GNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+G K G + G VK G V V NA I MY K + EA ++F+++ KD+
Sbjct: 511 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 570
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR----- 356
SWN+++T + Q G + FD MLS G +PD +++ VL CSH + G+
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 630
Query: 357 --QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-W 413
++HG + GL ++ SC ++D+ + G + +A+ + KM K A W
Sbjct: 631 MTRVHG--ISPGL-EHFSC-----------MVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 676
Query: 414 NIMI 417
++
Sbjct: 677 GALL 680
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 197/447 (44%), Gaps = 52/447 (11%)
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM- 233
++N Y K + +A ++F+ +P RDV WN +++GY Q F LE F M + G +
Sbjct: 77 MMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLP 136
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM-------------- 279
+ FT V+ + +G + + G+ K + V AL+DM
Sbjct: 137 NAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLF 196
Query: 280 -----------------YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
Y K + A+E FE M E+D+ SWN ++ Q G L
Sbjct: 197 SQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALG 256
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
L M G + D T+++ L AC+ L +L G+Q+H ++ S ID ++
Sbjct: 257 LVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI-------RSLPQIDP-YVA 308
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
+AL+++Y KCGS ++A+ VF + ++ SW ++I G +++++F+ M +
Sbjct: 309 SALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
D+ ++S C + L GR+ L ++S + + + +I + + G L A
Sbjct: 369 IDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCGDLQNA- 425
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ-LEPGHCGNYVLMSNIYVAG 560
E + +E + V W +++ A GN I A+ F ++ + + M Y+
Sbjct: 426 EFVFSSMSERDIVSWTSMITAYSQIGNI----IKAREFFDGMDTRNAITWNAMLGAYIQH 481
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWI 587
G E+ L + M Q K+ W+
Sbjct: 482 GAEEDGLKMYSAMLSQ---KDVTPDWV 505
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 14 CFNFSTSSGNQTFNH-----PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
CF+ S NQ F LAT I+ C ++ +L G+++HS L++G + +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISG---CFNRMDLCLGRQLHSLCLKSGHNRAIV 407
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEP------------------------------N 98
SLI++Y+KC ++ A FVF+++S N
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRN 467
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
T+NAM+ + + GL ++ M Q V PD T+ L + C D+ A +I
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 527
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G K GL L+V + +A + Y KC + EA K+F+ L +DVV WNAM+ GY+Q G
Sbjct: 528 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 587
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNAL 276
+A + F M +G + VLS G + G++ ++ ++ G G+ + +
Sbjct: 588 QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCM 647
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD 318
+D+ G+ + EA ++ + M K W ++++ + GN +
Sbjct: 648 VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDE 690
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/570 (32%), Positives = 317/570 (55%), Gaps = 9/570 (1%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
Q +H+ +++ G S++N+Y KC +++ A +F + +V ++N+++SG+
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR-DVISWNSLVSGYAQ 224
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ L M+ G+ PD+ TF L+ + K +HG + + GL+ D +I
Sbjct: 225 LGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHI 284
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
++L+ YLKC + A ++FE + +DV+ W AM++G Q A+ VFRRM K +
Sbjct: 285 ETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRV 344
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
S T+ VL+A +G F G VHG +++ +P N+L+ MY K + ++
Sbjct: 345 MPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCS 404
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F+ M +DI SWN+I++ H Q G+ L LF+ M A +PD +T ++L AC+ + A
Sbjct: 405 VFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGA 464
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+ IH ++ + L G C + ++ AL+DMY+KCG + AQ F +M ++D+
Sbjct: 465 LHQGKWIHNFVTKSCL---GPC-----ILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLV 516
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW+ +I GYG G+G+ AL M+S ++P+ V ++ +LSACSH+G + QG F M
Sbjct: 517 SWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSM 576
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+G+ P +EH C++D+L RAG++ EAY M + + V LL A R GN +L
Sbjct: 577 TKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVEL 636
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+I A+ + L+P + GNYV +++ Y + +++ V ++ M+ +++K PG S+IEL
Sbjct: 637 GDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHG 696
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+ TF + SHP+ + I + L R R
Sbjct: 697 TITTFFTDHSSHPQFEEIIDRVLLLNKRRR 726
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 289/574 (50%), Gaps = 40/574 (6%)
Query: 11 FSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
+SS + T TF P + C SL L +H G H ++ G
Sbjct: 36 YSSMLSTDTPPDAHTF--PSLVKAC-TSLDLFSH------GLSFHQRVIVDGYSSDSYIA 86
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS----NDFAFKGLDFFNHMR 126
TSLIN YSK + A VF+ + + NV + MI G Y+ +D AF +N MR
Sbjct: 87 TSLINFYSKFGHNQSARKVFDTMD-DRNVVPWTTMI-GCYTRAGEHDVAFS---MYNIMR 141
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ G+ P T L+ V+ ++ ++ +H V + G DV + ++++N Y KC +E
Sbjct: 142 RQGIQPSSVTMLGLLS---GVLELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+A +FE + RDV+ WN++V+GYAQ+G + L++ RM +GI + T ++SA
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
M G++VHG +++ G + + +LI MY K V A IFE M KD+ SW +
Sbjct: 259 MQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTA 318
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+++ Q D + +F RML + P T ++VL AC+ L + G +HGYI+
Sbjct: 319 MISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQR 378
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ D+ N+L+ MY KCG + + VF +MS++D+ SWN ++ G+ +G
Sbjct: 379 IKL--------DIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHL 430
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+AL +F+ M +A+ +PD +T V +L AC+ G L QG+ ++ ++ + P I T
Sbjct: 431 CKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGK-WIHNFVTKSCLGPCILIDTA 489
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEP 544
++DM + G L A + MP + + V W +++A HG + A R++ L
Sbjct: 490 LVDMYSKCGDLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGE----TALRMYSDFLHT 544
Query: 545 GHCGNYVLMSNIYVA---GGKYEEVLDIRHTMRQ 575
G N+V+ +I A G ++ L H+M +
Sbjct: 545 GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTK 578
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 158/339 (46%), Gaps = 13/339 (3%)
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
+NA++N + G F L + M T ++ A + F +G H V+
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
GY S + +LI+ Y K A ++F+ M+++++ W +++ + + G HD
Sbjct: 76 VDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFS 135
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+++ M G QP VT +L S + L+H + +H ++ G DV +
Sbjct: 136 MYNIMRRQGIQPSSVTMLGLL---SGVLELVHLQCLHACVIQYGFGS--------DVALA 184
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+++++Y KCG + DAQ +F M +DV SWN ++ GY G +E L + M ++
Sbjct: 185 NSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIE 244
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PD+ TF ++SA + L G+ + R G+ T +I M + G +N A+
Sbjct: 245 PDQQTFGSLVSAAAMQSKLGVGKMVHGHI-LRAGLEQDSHIETSLIGMYLKCGNVNSAFR 303
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
+ M ++ + + W +++ + D+A +R+ +
Sbjct: 304 IFEGMMHK-DVISWTAMISGLVQNDCADMAVTVFRRMLK 341
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
S+N+I+ G L + MLS PD TF +++ AC+ L HG H +
Sbjct: 15 SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+V+G + D ++ +L++ Y+K G + A+ VF M ++V W MI Y
Sbjct: 75 IVDGYSS--------DSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
G+ A M++ M ++P VT +G+LS
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS 157
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 311/580 (53%), Gaps = 55/580 (9%)
Query: 29 PFTLATCI-ASLQLCAHQTNLQK----GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
P ++++ + A Q CA ++ + GQ IH+ ++R G SLI+MY+KC +M
Sbjct: 242 PVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEM 301
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
A+ VF +L + ++N +I+GF K ++ + M++ G P++ T+ L+
Sbjct: 302 DEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS 360
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C +K + + A +F+++ V W
Sbjct: 361 C-----------------------------------IKARDVHSARAMFDKISRPSVTTW 385
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N +++GY Q + +E+FRRM + + R T+ +LS+ +G GR VH V+
Sbjct: 386 NTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR 445
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI---MTVHEQCGNHDGT 320
+ + V + L+DMY K +G A IF M E+D+ WNSI +T+H +
Sbjct: 446 FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL---NKEA 502
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
F +M G P ++++++ +CS L+++ HGRQIH ++ +G +N V+
Sbjct: 503 FDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQN--------VY 554
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ +AL+DMY KCG+M DA++ F M K++ +WN MI GY +G G +A+++F M +
Sbjct: 555 VGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTE 614
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
KPD VTF+ VL+ CSHSG + + F ME+ YG++P EHYTC+ID LGRAG+ E
Sbjct: 615 QKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEV 674
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
L MP + +P++W LLAA +H N +L + AA+ +F+++P + YVL+SNIY +
Sbjct: 675 EALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASL 734
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
G++ + +R M + V K G SWI+ KDG+ F+ +D
Sbjct: 735 GRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 774
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 225/480 (46%), Gaps = 58/480 (12%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLA+ +++ C L G+ H ++ G+ + +L+ MY+KC + A+ +
Sbjct: 142 FTLASVLSA---CGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRL 198
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F ++ PN ++ AM+ G L F M + GV D + ++ C A
Sbjct: 199 FYGMA-RPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACA 257
Query: 150 V-LEVKK-------IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
V + IH LV + G D ++G++L++ Y KC M+EA+KVFE LP +V
Sbjct: 258 TDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIV 317
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN ++ G+ Q G KA+EV M + G + T + +L++ I
Sbjct: 318 SWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCI--------------- 362
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
K + V A +F+ + + +WN++++ + Q H T+
Sbjct: 363 --------------------KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTI 402
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF RM QPD T + +L +CS L L GRQ+H V L N D+F+
Sbjct: 403 ELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHS-ASVRFLLHN-------DMFV 454
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+ L+DMY+KCG + A+ +F KM+++DV WN +I G + KEA D F M E +
Sbjct: 455 ASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGI 514
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
P E ++ ++++CS + GR+ +M+ Y + + +IDM + G +++A
Sbjct: 515 MPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYD--QNVYVGSALIDMYAKCGNMDDA 572
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/494 (25%), Positives = 226/494 (45%), Gaps = 86/494 (17%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF----------------------- 109
L+ +YS+ ++AL F L PN ++YNA +S
Sbjct: 49 LVELYSRAGLPRHALLAFRALP-SPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVS 107
Query: 110 ---------YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
S + ++ + MR G+LP +T ++ C + A+ + ++ HG+
Sbjct: 108 WNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVA 167
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K+GLD + ++ +AL+ Y KC + +A+++F + + V + AM+ G AQ G AL
Sbjct: 168 VKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDAL 227
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALI--------MMGFFKNGRVVHGIVVKMGYDSGVPV 272
+F RM + G+ + +V+ VL A + F+ G+ +H +VV+ G+ S V
Sbjct: 228 RLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHV 287
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N+LIDMY K + EA+++FE + I SWN ++T Q G+ + + M AGF
Sbjct: 288 GNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGF 347
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ VT+S +L +C + R +H
Sbjct: 348 EPNEVTYSNLLASC------IKARDVH--------------------------------- 368
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
A+ +F K+S+ V +WN ++ GY + Q ++ +++F M ++PD T +L
Sbjct: 369 ----SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 424
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
S+CS G L GR+ + R+ + + + ++DM + GQ+ A + M E +
Sbjct: 425 SSCSKLGILDFGRQ-VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM-TERD 482
Query: 513 PVVWRTLLAASRLH 526
V W ++++ +H
Sbjct: 483 VVCWNSIISGLTIH 496
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT-VHEQCGNHDGTLRLFDRMLSAGF 332
NA + + + A ++ M ++ SWN++++ + G+ + ++ RM + G
Sbjct: 78 NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGL 137
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P T ++VL AC LAAL GR+ HG V GL N F+ NAL+ MYTKC
Sbjct: 138 LPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQ--------FVENALLGMYTKC 189
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ DA +F M++ + S+ M+ G G +AL +F+ MC + + D V+ VL
Sbjct: 190 GSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVL 249
Query: 453 SACSH--SGFLSQGREF-----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
AC+ + S R F + + R G +IDM + +++EA ++
Sbjct: 250 GACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFE 309
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
++P+ V W L+ G+ A+ E G N V SN+ + K +
Sbjct: 310 SLPS-VTIVSWNILITGFGQEGSC--AKAVEVLSLMQEAGFEPNEVTYSNLLASCIKARD 366
Query: 566 VLDIR 570
V R
Sbjct: 367 VHSAR 371
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 336/651 (51%), Gaps = 56/651 (8%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATC------IASLQLCAHQTNLQKGQEIHSYMLRTG 62
NP S FN S T + I+ L +C + ++HS + G
Sbjct: 5 NPLKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRG 61
Query: 63 IIDSPLSITSLINMYSKCCQM----KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ +P L + C ++ YA +F + EP+V +N MI G+ D +G
Sbjct: 62 VAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIP-EPDVVVWNNMIKGWSKVDCDGEG 118
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCC-DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+ + +M + GV PD +TFP L+ D A+ KK+H V K GL ++Y+ +ALV
Sbjct: 119 VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVK 178
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y C M+ A VF+ DV WN M++GY ++ E+ +++E+ M + + + T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ VLSA + + VH V + + + + NAL++ Y + A+ IF M+
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 298 EKDIFSWNSIMTVHEQCGNH----------------------DGTLR---------LFDR 326
+D+ SW SI+ + + GN DG LR +F
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M SAG PD T +VL AC+HL +L G I YI N + +DV + NAL+
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK--------NDVVVGNALI 410
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG AQ VF M ++D +W M++G +GQG+EA+ +F M + ++PD++
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T++GVLSAC+HSG + Q R+F M S + + P++ HY C++DMLGRAG + EAYE+
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP N +VW LL ASRLH + +AE+AA+++ +LEP + Y L+ NIY +++++
Sbjct: 531 MPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++R + ++K PG S IE+ H F++ D+SH +++ IY +L L
Sbjct: 591 REVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/528 (35%), Positives = 284/528 (53%), Gaps = 24/528 (4%)
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
YA +F + PNV+ +N+MI G+ ++ L + M Q G PD +TFP ++K C
Sbjct: 59 YANLLFRQIH-SPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKAC 117
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ + K +H + K G + +VY+ + L+N Y++C+ ME LKVF+++P +VV W
Sbjct: 118 SFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWT 177
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++NGY + +ALEVF+ M + G+ + T+ L A GR VH V K
Sbjct: 178 CLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKA 237
Query: 265 GYD-------SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
GYD S V + A+++MY K + A E+F M E++I +WN ++ + Q +
Sbjct: 238 GYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERY 297
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L LF ML+ GF PD TF +VL C+ L G +H Y++ + +AK
Sbjct: 298 NEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAK-------- 349
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTK-MSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D+ + AL+DMY K G + AQ +F + KKDV W MI + G G EAL +F M
Sbjct: 350 DIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIM 409
Query: 437 CE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
E + L PD +T++GVL ACSH G + + ++ LM YG++P EHY+C++D+L RAG
Sbjct: 410 QEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAG 469
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
EA +L M N +W LL ++H N +A R+ +LEP G Y L+SN
Sbjct: 470 HFREAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSN 529
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
IY GK+EEV R M+ + + K G S +E+K +SSD +
Sbjct: 530 IYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEMK------VSSDETQ 571
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 25/404 (6%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF L + C+ + G+ +HS +L++G + T L+NMY +C M+
Sbjct: 108 FTFPFVL-------KACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMES 160
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
L VF+ + + NV + +I+G+ ND + L+ F M + GV ++ T + C
Sbjct: 161 GLKVFDKIP-KWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACA 219
Query: 146 DVMAVLEVKKIHGLVFKLGLDL-------DVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
V + +H V K G D +V + +A+V Y KC ++ A ++F ++P R
Sbjct: 220 RCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPER 279
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
++V WN M+N Y Q +++AL +F M G + T VLS G VH
Sbjct: 280 NIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVH 339
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNH 317
++K + + AL+DMY K +G A +IF +E+KD+ W S++ G+
Sbjct: 340 AYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHG 399
Query: 318 DGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ L LF M + PD +T+ VL ACSH+ + ++ N + K+
Sbjct: 400 NEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQK-----QFNLMTKSYGILPE 454
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+ + + ++D+ ++ G R+A+ + MS + ++A W ++ G
Sbjct: 455 KEHY--SCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNG 496
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 189/393 (48%), Gaps = 17/393 (4%)
Query: 150 VLEVKKIHGLVFKLGLDLDVYIG--SALVNTYLKCQFMEE---ALKVFEELPLRDVVLWN 204
+L+ K H L+ ++ I S L++ + F E A +F ++ +V ++N
Sbjct: 17 LLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANLLFRQIHSPNVYIFN 76
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+M+ GYA+ +L ++++M + G FT VL A + +G+ VH ++K
Sbjct: 77 SMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKS 136
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G+++ V V L++MY + K + L++F+ + + ++ +W ++ + L +F
Sbjct: 137 GFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVF 196
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG-----LAKNGSCKDIDDV 379
M G + + VT L AC+ + GR +H + G A N +V
Sbjct: 197 KEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNS------NV 250
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ A+++MY KCG + A+ +F KM ++++ +WN MI Y + EAL +F M
Sbjct: 251 ILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLAN 310
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
PD+ TF+ VLS C+ L+ G E + + + I T ++DM + G+L
Sbjct: 311 GFCPDKATFLSVLSVCARRCVLALG-ETVHAYLLKSNMAKDIALATALLDMYAKNGELGS 369
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A ++ + + V+W +++ A +HG+ + A
Sbjct: 370 AQKIFNNSLEKKDVVMWTSMINALAIHGHGNEA 402
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 182/598 (30%), Positives = 319/598 (53%), Gaps = 21/598 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C +L + +H +M +TG TSL+N Y +C + A +F+ + E N
Sbjct: 85 LHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP-ERN 143
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V T+ A+++G+ N GL+ F M ++G P YT + C V K++HG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE-FH 217
K G + +G++L + Y K ++ AL+ F +P ++V+ W M++ A+ E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+ +F M +G+ + FT+T V+S G+ V K+G ++ +PV N+ +
Sbjct: 264 LGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-----------TLRLFDR 326
+Y + EA+ +FE ME+ I +WN++++ + Q + L +F
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ + +PDL TFS++L CS + AL G QIH + +G + DV +N+AL+
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF--------LSDVVVNSALV 435
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
+MY KCG ++DA F +M + +W MI GY GQ +EA+ +F M A ++P+E+
Sbjct: 436 NMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI 495
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TFV +LSACS++G + + + +M+ Y + P ++HY C+IDM R G++ +A+
Sbjct: 496 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR 555
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
E N +W +L+A R HGN +LA AA ++ +L+P Y+L+ N+Y++ ++++V
Sbjct: 556 TGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDV 615
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+Q++V SWI +KD ++ F ++DR+HP+A +Y L +L + + G
Sbjct: 616 ARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIG 673
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 292/537 (54%), Gaps = 10/537 (1%)
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
FV N+ +N + + + + M + G PD ++FP ++K C +
Sbjct: 7 FVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASL 66
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD--VVLWNA 205
+ +++H V K G + + ++ +AL++ Y KC + +A KVFEE P V +NA
Sbjct: 67 SLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNA 126
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++GY + A +FRRM + G+ + T+ G++ + + GR +HG VK G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
DS V V+N+ I MY K V +F+ M K + +WN++++ + Q G L L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+M S+G PD T +VL +C+HL A G ++ + NG N VF++NA
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN--------VFVSNAS 298
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY +CG++ A+ VF M K + SW MI YGM G G+ L +F M + ++PD
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
FV VLSACSHSG +G E M+ Y + P EHY+C++D+LGRAG+L+EA E
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+MP E + VW LL A ++H N D+AE+A +V + EP + G YVLMSNIY E
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ IR MR++ RK PG S++E K +H F++ DRSH + + ++ L L + E
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME 535
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 174/332 (52%), Gaps = 10/332 (3%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ S F+ PF L +C ASL L GQ++H ++ + G P +T+LI+MY
Sbjct: 47 SGSSPDAFSFPFILKSC-ASLSLPV------SGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 79 KCCQMKYALFVF--NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
KC + A VF N S + +V YNA+ISG+ +N F M++ GV D T
Sbjct: 100 KCGLVADARKVFEENPQSSQLSV-CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVT 158
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
L+ C + + +HG K GLD +V + ++ + Y+KC +E ++F+E+P
Sbjct: 159 MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
++ ++ WNA+++GY+Q G + LE++ +M G+ FT+ VLS+ +G K G
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
V +V G+ V V NA I MY + + +A +F++M K + SW +++ + G
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+ L LFD M+ G +PD F VL ACSH
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSH 370
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 5/312 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + LC L G+ +H ++ G+ + S I MY KC ++ +F+ +
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T+NA+ISG+ N A+ L+ + M+ GV PD +T ++ C + A
Sbjct: 218 PVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++ LV G +V++ +A ++ Y +C + +A VF+ +P++ +V W AM+ Y
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G L +F M K GI VLSA G G + + + + G
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ L+D+ G+ + EA+E E M E D W +++ + N D F +++
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 332 FQPDLVTFSTVL 343
F+P+ + + ++
Sbjct: 455 FEPNNIGYYVLM 466
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 299/555 (53%), Gaps = 10/555 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C G+ +H ++ G D + SL++MY+K ++ A VF + +
Sbjct: 172 ALKACIRSAEYSYGRSLHCDAIKVGGADG-FVMNSLVDMYAKAEDLECARKVFERIP-DR 229
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ +MISG N FA GL FN MRQ V P +YT +I C + + + + +H
Sbjct: 230 NVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMH 289
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K GL + +I +AL++ Y+KC ++ A VF+EL D+VLW M+ GY Q G
Sbjct: 290 GSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPL 349
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL +F I + T VLSA + G+ +HG+ VK+G V NAL+
Sbjct: 350 DALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALV 409
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + V EA IF + KD+ +WNS+++ + + D L LF +M G PD +
Sbjct: 410 DMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAI 469
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ L A L L+ G+ IHGY V + N ++++ AL+++Y KCG +
Sbjct: 470 SVVNALSASVCLGDLLIGKSIHGYAVKHAFVSN--------IYVDTALLNLYNKCGDLLS 521
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF +M+ ++ +W MI GYGM G ++ +F M + + P+++ F +LS CSH
Sbjct: 522 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSH 581
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG ++ G+ + M + + P+++HY C++D+L RAG L +A E MP +A+ VW
Sbjct: 582 SGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWG 641
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
L LH AE A +R+ L P YVL+SN+Y + G +++ L IR M+++
Sbjct: 642 AFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKG 701
Query: 578 VRKNPGCSWIELKDG 592
+ K PGCS + ++G
Sbjct: 702 LVKLPGCSSVGHENG 716
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 199/395 (50%), Gaps = 20/395 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T+AT I + C+ L +G+ +H +++ G++ + +L++MY KC ++ +A V
Sbjct: 267 YTIATVITA---CSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCV 323
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ LS ++ + MI G+ N L F R + P+ T ++ +
Sbjct: 324 FDELS-YIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRD 382
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K IHGL KLGL +G+ALV+ Y KCQ + EA ++F + +DVV WN+M++G
Sbjct: 383 LSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISG 442
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ AL +F++MS +G +V LSA + +G G+ +HG VK + S
Sbjct: 443 YAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSN 502
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V AL+++Y K + A +F+ M +++ +W +++ + G+ G++ LF ML
Sbjct: 503 IYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLK 562
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQ----IHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
G P+ + F+++L CSH + G++ + + + K+ +C +
Sbjct: 563 DGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYAC-----------M 611
Query: 386 MDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
+D+ + G++ DA M + D + W + G
Sbjct: 612 VDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHG 646
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 14/256 (5%)
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP- 334
L+ Y + A +F+ D +S+ +++ Q H + L M P
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 335 --DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D S L AC A +GR +H + G A D F+ N+L+DMY K
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGA---------DGFVMNSLVDMYAKA 213
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+ A+ VF ++ ++V SW MI G +G + L +F+ M + + P E T V+
Sbjct: 214 EDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVI 273
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
+ACS L QGR ++ + G++ ++DM + G+L+ A + +
Sbjct: 274 TACSALFGLHQGR-WMHGSVIKQGLMSNSFISAALLDMYVKCGELDHA-RCVFDELSYID 331
Query: 513 PVVWRTLLAASRLHGN 528
V+W T++ +GN
Sbjct: 332 LVLWTTMIVGYTQNGN 347
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/567 (34%), Positives = 308/567 (54%), Gaps = 7/567 (1%)
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
M G I + LI++Y+KC + AL VF+ + + NVF++ M++ F N +
Sbjct: 1 MEELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSK-NVFSWTMMLAAFAENRDFDR 59
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
FF M G+ P + + C D + + I + G++ + + +ALV+
Sbjct: 60 CWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVS 119
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y K +A VF + RDVV W+AMV YA+ G +AL +FR+M +G+ ++ T
Sbjct: 120 LYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVT 179
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ L A +G ++G ++H V G SGV V AL+++YGK + A E F +
Sbjct: 180 LVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIV 239
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
EK++ +W++I + + + +R+ RM G P+ TF +VL AC+ +AAL GR+
Sbjct: 240 EKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRR 299
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
IH I V G G + DV++ AL++MY+KCG++ A +F K++ D+ WN +I
Sbjct: 300 IHERIHVLG----GGLES--DVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLI 353
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
GQ ++AL++F M L+P +TF VL ACSH+G L QGR+ +G+
Sbjct: 354 ATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGI 413
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P EH+ C++D+LGRAG + ++ +L L MP E +PV W L A R + N D A AA+
Sbjct: 414 FPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAE 473
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI 597
+FQL+P YVL+SN+Y G++ +V +R M+ K G SWIE+KD +H FI
Sbjct: 474 NLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFI 533
Query: 598 SSDRSHPEAKSIYAELHSLTARLREHG 624
S D HP I+AEL LT ++ G
Sbjct: 534 SGDLDHPRIGEIHAELQRLTKLMKAAG 560
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 173/359 (48%), Gaps = 5/359 (1%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
ML+ + F C+ F Q N P + I L C + G+ I +L
Sbjct: 47 MLAAFAENRDFDRCWLFFRGMLLQGIN-PGEVGISI-FLSACTDAREITIGRSIQLAILG 104
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
TGI + + T+L+++Y K A VF +S +V ++AM++ + N + L
Sbjct: 105 TGIEEESIVQTALVSLYGKLGHCTDAASVFLRMS-HRDVVAWSAMVAAYARNGHPREALG 163
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F M GV P+K T + C + + +H V G+ V +G+ALVN Y
Sbjct: 164 LFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYG 223
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
KC +E A + F ++ ++VV W+A+ YA+ A+ V RM EG+ + T
Sbjct: 224 KCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVS 283
Query: 241 VLSALIMMGFFKNGRVVHGI--VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE 298
VL A + K GR +H V+ G +S V V+ AL++MY K + A +F+ +
Sbjct: 284 VLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAH 343
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
D+ WNS++ + Q G + L LF+RM G QP ++TF++VL ACSH L GR+
Sbjct: 344 LDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 402
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 17/298 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA +L+ G +H + GI + T+L+N+Y KC +++ A F +
Sbjct: 179 TLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI 238
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++A+ + + ND + + M G+ P+ TF ++ C + A+ +
Sbjct: 239 -VEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQG 297
Query: 154 KKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
++IH + L GL+ DVY+ +ALVN Y KC + A +F+++ D+VLWN+++ A
Sbjct: 298 RRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNA 357
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV-------VHGIVVKM 264
Q G+ KALE+F RM EG+ + T T VL A G GR HGI +
Sbjct: 358 QHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEA 417
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTL 321
+ ++D+ G+ + ++ ++ M E +W + + N DG +
Sbjct: 418 EH------FGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAI 469
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 336/651 (51%), Gaps = 56/651 (8%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATC------IASLQLCAHQTNLQKGQEIHSYMLRTG 62
NP S FN S T + I+ L +C + ++HS + G
Sbjct: 5 NPLKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRG 61
Query: 63 IIDSPLSITSLINMYSKCCQM----KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ +P L + C ++ YA +F + EP+V +N MI G+ D +G
Sbjct: 62 VAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIP-EPDVVVWNNMIKGWSKVDCDGEG 118
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCC-DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+ + +M + GV PD +TFP L+ D A+ KK+H V K GL ++Y+ +ALV
Sbjct: 119 VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVK 178
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y C M+ A VF+ DV WN M++GY ++ E+ +++E+ M + + + T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ VLSA + + VH V + + + + NAL++ Y + A+ IF M+
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 298 EKDIFSWNSIMTVHEQCGNH----------------------DGTLR---------LFDR 326
+D+ SW SI+ + + GN DG LR +F
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M SAG PD T +VL AC+HL +L G I YI N + +DV + NAL+
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK--------NDVVVGNALI 410
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG AQ VF M ++D +W M++G +GQG+EA+ +F M + ++PD++
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T++GVLSAC+HSG + Q R+F M S + + P++ HY C++DMLGRAG + EAYE+
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP N +VW LL ASRLH + +AE+AA+++ +LEP + Y L+ NIY +++++
Sbjct: 531 MPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++R + ++K PG S IE+ H F++ D+SH +++ IY +L L
Sbjct: 591 REVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 316/577 (54%), Gaps = 24/577 (4%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+I + ++ G + L+ + + +M YA +F+ + +PN+ +N+M G+
Sbjct: 118 HQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP-DPNIALWNSMFRGYAQ 176
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
++ + + F M+ + + P+ +TFP ++K C + A++E +++H + K G + ++
Sbjct: 177 SESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFV 236
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
G+ L++ Y + +A K+F E+ R+VV W +M+NGY + A +F + +
Sbjct: 237 GTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDV 296
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHG--IVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
VL +++ G+ + G +V + +M + V N ++ Y V EA
Sbjct: 297 ---------VLWNIMVSGYIEGGDMVEARKLFXEMP-NRDVMFWNTVLKGYATNGNV-EA 345
Query: 290 LE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACS 347
LE +FE M E++IFSWN+++ + G L F RMLS + P+ T TVL AC+
Sbjct: 346 LEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACA 405
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L AL G+ +H Y +GL N V++ NALMDMY KCG + +A VF M
Sbjct: 406 RLGALDLGKWVHVYAESSGLKGN--------VYVGNALMDMYAKCGIIENAISVFRGMDT 457
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD+ SWN +I G M +G +AL++F M A KPD +TF+G+L AC+H G + G +
Sbjct: 458 KDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAY 517
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M Y ++P IEHY C++DML RAG+L +A MP EA+ V+W LL A R++
Sbjct: 518 FQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYK 577
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
N +LAE+A QR+ +LEP + NYV++SNIY G++E+V ++ MR +K PGCS I
Sbjct: 578 NVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLI 637
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ D + F S D HP+ + IY L L LR G
Sbjct: 638 EVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFG 674
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 178/383 (46%), Gaps = 30/383 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L +G+++H ++++ G +P T+LI+MYS + A +F + E N
Sbjct: 206 LKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEM-FERN 264
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK--YTFPCLIKCCCDVMAVLEVKKI 156
V + +MI+G+ D + R + P++ + ++ + ++E +K+
Sbjct: 265 VVAWTSMINGY------ILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKL 318
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
F + DV + ++ Y +E +FEE+P R++ WNA++ GYA G F
Sbjct: 319 ----FXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLF 374
Query: 217 HKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ L F+RM S+ + + T+ VLSA +G G+ VH G V V NA
Sbjct: 375 FEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNA 434
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K + A+ +F M+ KD+ SWN+++ L LF +M +AG +PD
Sbjct: 435 LMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPD 494
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD----IDDVFMNNALMDMYTK 391
+TF +L AC+H+ +V +G A S D + + ++DM +
Sbjct: 495 GITFIGILCACTHMG-----------LVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLAR 543
Query: 392 CGSMRDAQMVFTKMS-KKDVASW 413
G + A KM + D W
Sbjct: 544 AGRLEQAXAFVRKMPVEADGVIW 566
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 172/376 (45%), Gaps = 19/376 (5%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+V +I + G + YI LV + M A ++F+++P ++ LWN+M GYA
Sbjct: 116 QVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYA 175
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q + + + +F +M I + FT VL + + G VH ++K G+
Sbjct: 176 QSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPF 235
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V LIDMY G VG+A +IF M E+++ +W S++ + + RLFD
Sbjct: 236 VGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFD----LA 291
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ D+V ++ ++ ++ R++ + DV N ++ Y
Sbjct: 292 PERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNR------------DVMFWNTVLKGYAT 339
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVG 450
G++ + +F +M ++++ SWN +I GY +G E L F M E+ + P++ T V
Sbjct: 340 NGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVT 399
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSAC+ G L G+ ES G+ + ++DM + G + A + M +
Sbjct: 400 VLSACARLGALDLGKWVHVYAESS-GLKGNVYVGNALMDMYAKCGIIENAISVFRGM-DT 457
Query: 511 ANPVVWRTLLAASRLH 526
+ + W TL+ +H
Sbjct: 458 KDLISWNTLIGGLAMH 473
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT + L CA L G+ +H Y +G+ + +L++MY+KC ++ A+
Sbjct: 391 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 450
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++ ++N +I G + L+ F M+ G PD TF ++ C C M
Sbjct: 451 VFRGMDTK-DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGIL-CACTHM 508
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSA------LVNTYLKCQFMEEALKVFEELPLR-DVV 201
++E G + + D I +V+ + +E+A ++P+ D V
Sbjct: 509 GLVE----DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGV 564
Query: 202 LWNAMV 207
+W ++
Sbjct: 565 IWAGLL 570
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 316/589 (53%), Gaps = 26/589 (4%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L I+ L C ++L + ++IH+ +L+ + LI +S C QM A+ VFN
Sbjct: 17 LEQKISDLHRC---SSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFN 73
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ +P+V YN +I N F M+ GV D +T+P L+K C + V
Sbjct: 74 QIQ-DPDVLLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVR 132
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPLRDVVLWNAMVNG 209
V+ IH V K+G LD+++ ++L+++Y KC + A KVFE + RD V WN+M+ G
Sbjct: 133 VVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGG 192
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV--VHGIVVKMGYD 267
++GE +A +F M + R TV+ I+ G+ K G + + KM
Sbjct: 193 LVKVGELGEARRLFDEMPE------RDTVSW---NTILDGYVKAGEMNAAFELFEKMPAR 243
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V + ++ Y K + A +F+ M K++ W +++ + + G + L+++M
Sbjct: 244 NVVS-WSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQM 302
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
AG + D T ++L AC+ L G+++H I C ++NAL+D
Sbjct: 303 EEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRF----KCS----TPVSNALID 354
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGS+ +A +F M +KDV SWN +I G M G G++AL +FS M PD+VT
Sbjct: 355 MYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVT 414
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVL AC+H+GF+ +G + ME YGV P +EHY C++D+LGR G+L EA+ L +M
Sbjct: 415 FVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSM 474
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E N ++W TLL A R+H T LAE R+ + E GN ++SNIY A G ++
Sbjct: 475 PLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFA 534
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
+IR M+ +++K G S IE+ D +H F DRSHP++ IY + L
Sbjct: 535 NIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKSDRIYKTIDGL 583
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 8/218 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T I+ L CA L G+ +H+ + RT S +LI+MY+KC ++ AL +
Sbjct: 309 FDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSI 368
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++NA+I G + K L F+ M+ G +PDK TF ++ C
Sbjct: 369 FHGM-VRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGF 427
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
V E + H + G+ +V +V+ + ++EA ++ +PL + ++W ++
Sbjct: 428 VDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLL 487
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
A EVF R+ K S + +G LS L
Sbjct: 488 GACRMHSATGLAEEVFDRLVK-----SELSDSGNLSML 520
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/484 (37%), Positives = 290/484 (59%), Gaps = 28/484 (5%)
Query: 154 KKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H L + GL D + SAL++ Y C +A K F+E+P + V+ AM +GY +
Sbjct: 109 RQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVR 168
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV--------VHGIVVKM 264
+ +L +FR++ G + T V A ++ F + R+ +H +VVK
Sbjct: 169 NNLVYPSLALFRKLIASG------SATAVDEAAALVAFSASARIPDCGITSSLHALVVKT 222
Query: 265 GYDSGVPVMNALIDMYGKG--KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
G D V+N ++D Y KG + +G A ++F+ ME KD+ SWNS++ ++ Q G L
Sbjct: 223 GLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALG 281
Query: 323 LFDRML--SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L+ +ML S + + VT S +L AC+H + G+ IH +V GL +N V+
Sbjct: 282 LYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEEN--------VY 333
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ +++DMY+KCG + A+ F K+ +K++ SW+ MI GYGM G G+EALD+F+ MC +
Sbjct: 334 VGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSG 393
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
P+ +TF+ VL+ACSH+G L +GR + M+ R+G+ P +EHY C++D+LGRAG L+EA
Sbjct: 394 QNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEA 453
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
Y L M + + +W LL+A R+H N +LAEI+A+R+F+L+ +CG YVL+SNIY
Sbjct: 454 YGLIKEMKVKPDAAIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEA 513
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
G +++V +R ++ + + K PG S +ELK H F D+SHP+ K IY+ L L ++
Sbjct: 514 GMWKDVERMRVLVKTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKM 573
Query: 621 REHG 624
+E G
Sbjct: 574 QEAG 577
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 184/375 (49%), Gaps = 17/375 (4%)
Query: 51 GQEIHSYMLRTGIIDS-PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G+++H +R+G+ S P S ++L++MY+ C + A F+ + PN AM SG+
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIP-SPNPVIITAMASGY 166
Query: 110 YSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
N+ + L F + G D+ + +H LV K GLD
Sbjct: 167 VRNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDG 226
Query: 168 DVYIGSALVNTYLKC--QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D + + +++ Y K + + A KVF+ + +DVV WN+M+ YAQ G AL ++R+
Sbjct: 227 DAGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRK 285
Query: 226 M--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M I + T++ +L A G + G+ +H VV+MG + V V +++DMY K
Sbjct: 286 MLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKC 345
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A + F+ ++EK+I SW++++T + G+ L +F+ M +G P+ +TF +VL
Sbjct: 346 GRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
ACSH L GR + N + K + V ++D+ + G + +A +
Sbjct: 406 AACSHAGLLDKGRYWY-----NAMKKRFGIE--PGVEHYGCMVDLLGRAGCLDEAYGLIK 458
Query: 404 KMS-KKDVASWNIMI 417
+M K D A W ++
Sbjct: 459 EMKVKPDAAIWGALL 473
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 136/262 (51%), Gaps = 8/262 (3%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQ--MKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+H+ +++TG+ + ++++ Y+K + + A VF+ + E +V ++N+MI+ +
Sbjct: 215 LHALVVKTGLDGDAGVVNTMLDAYAKGGRRDLGAARKVFDTM--EKDVVSWNSMIALYAQ 272
Query: 112 NDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N + L + M + + + T ++ C + K IH V ++GL+ +V
Sbjct: 273 NGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENV 332
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
Y+G+++V+ Y KC +E A K F+++ ++++ W+AM+ GY G +AL++F M +
Sbjct: 333 YVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRS 392
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSGVPVMNALIDMYGKGKCVGE 288
G + T VL+A G GR + + K G + GV ++D+ G+ C+ E
Sbjct: 393 GQNPNYITFISVLAACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDE 452
Query: 289 ALEIFEMMEEK-DIFSWNSIMT 309
A + + M+ K D W ++++
Sbjct: 453 AYGLIKEMKVKPDAAIWGALLS 474
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 101/192 (52%), Gaps = 9/192 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T A L CAH +Q G+ IH+ ++R G+ ++ TS+++MYSKC +++ A F +
Sbjct: 299 TLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKI 358
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N+ +++AMI+G+ + + LD FN M + G P+ TF ++ C +L+
Sbjct: 359 K-EKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHA-GLLDK 416
Query: 154 KK--IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGY 210
+ + + + G++ V +V+ + ++EA + +E+ ++ D +W A+++
Sbjct: 417 GRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLSAC 476
Query: 211 AQIGEFHKALEV 222
HK +E+
Sbjct: 477 ----RIHKNVEL 484
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 319/597 (53%), Gaps = 12/597 (2%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
P + IA L+ CA L G+ IH ++ + I ++LI++Y+KC QM A+
Sbjct: 239 RPDNYSVSIA-LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAV 297
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCD 146
VF +P+V + ++ISG+ + L FF+ M V PD T + C
Sbjct: 298 KVFMEYP-KPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQ 356
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ + +HG V + GLD + + ++L++ Y K ++ A +F E+ +D++ W+ M
Sbjct: 357 LSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 416
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
V YA G L++F M + I + TV VL A + + G +H + V G+
Sbjct: 417 VACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 476
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V AL+DMY K +A+++F M +KD+ +W + + + G ++ +F
Sbjct: 477 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 536
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
MLS+G +PD + +L S L L +H +++ NG N F+ +L+
Sbjct: 537 MLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ--------FIGASLI 588
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDE 445
++Y KC S+ DA VF M+ KDV +W+ +I YG GQG+EAL +F M + KP+
Sbjct: 589 EVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNN 648
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+ +LSACSHSG + +G +M ++Y + P EHY ++D+LGR G+L+ A ++
Sbjct: 649 VTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVIN 708
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP +A P +W LL A R+H N + E+AA+ +F L+P H G Y+L+SNIY +
Sbjct: 709 NMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHS 768
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R ++++ + K G S +ELK+ + +FI+ DR H E+ IY L L A++RE
Sbjct: 769 ATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMRE 825
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 168/590 (28%), Positives = 281/590 (47%), Gaps = 67/590 (11%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L TC + L + ++HS L+ G++ +T L +Y++ + +A +F
Sbjct: 146 LETCCSKLSI----------SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQ 195
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-----PDKYTFPCLIKCCCD 146
+ V+ +NA++ + + L F M + + PD Y+ +K C
Sbjct: 196 E-TPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAG 254
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ +L K IHG + K+ +D D+++GSAL++ Y KC M +A+KVF E P DVVLW ++
Sbjct: 255 LRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSI 314
Query: 207 VNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
++GY Q G AL F RM E + T+ V SA + FK GR VHG V + G
Sbjct: 315 ISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG 374
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
D+ + + N+L+ +YGK + A +F M +KDI SW++++ + G L LF+
Sbjct: 375 LDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFN 434
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
ML +P+ VT +VL AC+ ++ L G +IH V G + ++ AL
Sbjct: 435 EMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEM--------ETTVSTAL 486
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
MDMY KC S A +F +M KKDV +W ++ GY +G E++ +F M + +PD
Sbjct: 487 MDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDA 546
Query: 446 VTFVGVLSACSHSGFLSQG--------------REFL--PLMESRYGVVPTIEH------ 483
+ V +L+ S G L Q +F+ L+E Y +IE
Sbjct: 547 IALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEV-YAKCSSIEDANKVFK 605
Query: 484 ---------YTCVIDMLGRAGQLNEAYELALAMPNEA----NPVVWRTLLAASRLHG--- 527
++ +I G GQ EA +L M N + N V + ++L+A G
Sbjct: 606 GMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIK 665
Query: 528 -NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
++ +I + ++L+P + +Y +M ++ G+ + LD+ + M Q
Sbjct: 666 EGINMFDIMVNK-YKLKP-NSEHYAIMVDLLGRMGELDMALDVINNMPMQ 713
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 204/389 (52%), Gaps = 19/389 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ CC + L + ++H K GL D +I + L Y + + A K+F+E P R
Sbjct: 145 LLETCC---SKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT 201
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSK-EGIWMSR----FTVTGVLSALIMMGFFKNG 254
V LWNA++ Y GE+ + L +FR+M+ + + ++V+ L + + G
Sbjct: 202 VYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLG 261
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+V+HG + K+ D + V +ALID+Y K + +A+++F + D+ W SI++ +EQ
Sbjct: 262 KVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQS 321
Query: 315 GNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G+ + L F RM +S PD VT +V AC+ L+ GR +HG++ GL N C
Sbjct: 322 GSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGL-DNKLC 380
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+ N+L+ +Y K GS+++A +F +MS KD+ SW+ M+ Y +G + LD+F
Sbjct: 381 -------LANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLF 433
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
+ M + ++KP+ VT V VL AC+ L +G + L + YG T ++DM +
Sbjct: 434 NEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVN-YGFEMETTVSTALMDMYMK 492
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAA 522
+A +L MP + + + W L +
Sbjct: 493 CFSPEKAVDLFNRMPKK-DVIAWAVLFSG 520
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 319/598 (53%), Gaps = 21/598 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C +L + +H +M +TG TSL+N Y +C + A +F+ + E N
Sbjct: 85 LHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP-ERN 143
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V T+ A+++G+ N GL+ F M ++G P YT + C V K++HG
Sbjct: 144 VVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHG 203
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE-FH 217
K G + +G++L + Y K ++ AL+ F +P ++V+ W M++ A+ E
Sbjct: 204 YAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVE 263
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
L +F M +G+ + FT+T V+S G+ V K+G ++ +PV N+ +
Sbjct: 264 LGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTM 323
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-----------TLRLFDR 326
+Y + EA+ +FE ME+ I +WN++++ + Q + L +F
Sbjct: 324 YLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRD 383
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ + +PDL TFS++L CS + AL G QIH + +G + DV +N+AL+
Sbjct: 384 LKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF--------LSDVVVNSALV 435
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
+MY KCG ++DA F +M + +W MI GY GQ +EA+ +F M A ++P+E+
Sbjct: 436 NMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEI 495
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TFV +LSACS++G + + + +M+ Y + P ++HY C+IDM R G++ +A+
Sbjct: 496 TFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKR 555
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
E N +W +L+A R HGN +LA AA ++ +L+P Y+L+ N+Y++ ++++V
Sbjct: 556 TGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDV 615
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+Q++V SWI +KD ++ F ++DR+HP+A +Y L +L + + G
Sbjct: 616 ARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIG 673
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 280/487 (57%), Gaps = 9/487 (1%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
MR G P+++TF ++ M VL +++H L+ K G D ++++G+ALV+ Y KC
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLS 243
M A++VF+++P R++V WN+M+ G+ + +A+ VF+ + +E + + +V+ VLS
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A MG GR VHG+VVK G VMN+L+DMY K + E +++F+ + ++D+ +
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN ++ Q + F M G PD +FSTVL + + LAAL G IH I+
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
G KN + + +L+ MY KCGS+ DA VF + +V SW MI Y +
Sbjct: 241 KLGYVKN--------MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLH 292
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G + +++F M ++P VTFV VLSACSH+G + +G M+ + + P EH
Sbjct: 293 GCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEH 352
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
Y C++D+LGRAG L+EA +MP + P VW LL A R +GN + AA+R+F++E
Sbjct: 353 YACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME 412
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
P + GNYVL++N+ G+ EE ++R M VRK PGCSWI++K+ F + DRSH
Sbjct: 413 PYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSH 472
Query: 604 PEAKSIY 610
+ IY
Sbjct: 473 SSSDEIY 479
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 228/433 (52%), Gaps = 31/433 (7%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++HS + + G + T+L++MY+KC M A+ VF+ + E N+ ++N+MI GF+
Sbjct: 29 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMIVGFF 87
Query: 111 SNDFAFKGLDFFNH-MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N+ + + F +R+ V+P++ + ++ C ++ + +++HG+V K GL
Sbjct: 88 HNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLT 147
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
Y+ ++L++ Y KC+F +E +K+F+ + RDVV WN +V G+ Q +F +A F M +E
Sbjct: 148 YVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 207
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
GI + + VL + + G +H ++K+GY + ++ +LI MY K + +A
Sbjct: 208 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 267
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
++FE +E+ ++ SW ++++ ++ G + + LF+ MLS G +P VTF VL ACSH
Sbjct: 268 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 327
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA------LMDMYTKCGSMRDAQMVFT 403
GR V GLA S K I D MN ++D+ + G + +A+
Sbjct: 328 -----GR------VEEGLAHFNSMKKIHD--MNPGPEHYACMVDLLGRAGWLDEAKRFIE 374
Query: 404 KMSKKDVASWNIMILG----YGMDGQGKEALDMFSCMCEAKLKP-DEVTFVGVLSACSHS 458
M K S +LG YG G+EA + +++P + +V + + C+ S
Sbjct: 375 SMPMKPTPSVWGALLGACRKYGNLKMGREAAERL-----FEMEPYNPGNYVLLANMCTRS 429
Query: 459 GFLSQGREFLPLM 471
G L + E LM
Sbjct: 430 GRLEEANEVRRLM 442
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 14/346 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA+ L G+++H +++ G++ + SL++MY KC + +F + + +
Sbjct: 119 LSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVG-DRD 177
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V T+N ++ GF ND + ++F MR+ G+LPD+ +F ++ + A+ + IH
Sbjct: 178 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHD 237
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KLG ++ I +L+ Y KC + +A +VFE + +V+ W AM++ Y G ++
Sbjct: 238 QIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQ 297
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNAL 276
+E+F M EGI S T VLSA G + G + H +K +D G +
Sbjct: 298 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKKIHDMNPGPEHYACM 356
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGN----HDGTLRLFDRMLSAG 331
+D+ G+ + EA E M K S W +++ + GN + RLF+
Sbjct: 357 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM---EP 413
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ P + + C+ L ++ + VNG+ K C ID
Sbjct: 414 YNPG--NYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWID 457
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 309/579 (53%), Gaps = 18/579 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
N ++ +I + ++ G+ + + I S+ ++ +A +F+ + +PN T+NAM
Sbjct: 24 NYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP-QPNTATWNAMF 82
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
G+ N + F + ++ +P+ +TFP +IK C + V E +++H K G
Sbjct: 83 RGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFK 142
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
+ ++ ++L++ Y K +E+A KVF E+ R+VV+W A++NGY G+ +F
Sbjct: 143 SNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLA 202
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+ + M ++G + + KN + KM + NA+++ Y V
Sbjct: 203 PERDVVMWSVLISGYIES-------KNMAAARELFDKMP-NRDTMSWNAMLNGYAVNGEV 254
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPA 345
++F+ M E+++FSWN ++ + + G TL F RML G P+ T VL A
Sbjct: 255 EMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSA 314
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L AL G+ +H Y G N +F+ N L+DMY KCG + +A +VF +
Sbjct: 315 CSRLGALDMGKWVHVYAESIGYKGN--------LFVGNVLIDMYAKCGVIENAVVVFNCL 366
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+KD+ SWN +I G + G +AL MF M +PD VTFVG+LSAC+H G + G
Sbjct: 367 DRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGF 426
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ M Y +VP IEHY C++D+LGRAG L++A MP E + V+W LL A RL
Sbjct: 427 LYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRL 486
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
+ N ++AE+A QR+ +LEP + N+V++SNIY G+ E+V ++ MR RK PGCS
Sbjct: 487 YKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCS 546
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IE D + F S D H E +SIY L LT LR HG
Sbjct: 547 VIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHG 585
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 161/327 (49%), Gaps = 13/327 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT I S C +++G+E+H + G + TSLI+MYSK ++ A V
Sbjct: 111 FTFPMIIKS---CGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKV 167
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + E NV + A+I+G+ G F+ L D + LI +
Sbjct: 168 FGEMH-ERNVVVWTAIINGYILCGDVVSGRRLFD----LAPERDVVMWSVLISGYIESKN 222
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +++ F + D +A++N Y +E KVF+E+P R+V WN ++ G
Sbjct: 223 MAAAREL----FDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGG 278
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + G F + LE F+RM EG + + FT+ VLSA +G G+ VH +GY
Sbjct: 279 YVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKG 338
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N LIDMY K + A+ +F ++ KDI SWN+I+ G+ L +FDRM
Sbjct: 339 NLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMK 398
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
S G +PD VTF +L AC+H+ + G
Sbjct: 399 SEGEEPDGVTFVGILSACTHMGLVKDG 425
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 322/593 (54%), Gaps = 27/593 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
I+ LQ C + +I + ++ G + L+ + + +M YA +F+ +
Sbjct: 42 ISLLQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP- 97
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+PN+ +N+M G+ ++ + + F M+ + + P+ +TFP ++K C + A++E ++
Sbjct: 98 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQ 157
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+H + K G + ++G+ L++ Y + +A K+F E+ R+VV W +M+NGY +
Sbjct: 158 VHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSAD 217
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG--IVVKMGYDSGVPVM 273
A +F + + VL +++ G+ + G +V + +M + V
Sbjct: 218 LVSARRLFDLAPERDV---------VLWNIMVSGYIEGGDMVEARKLFHEMP-NRDVMFW 267
Query: 274 NALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AG 331
N ++ Y V EALE +FE M E++IFSWN+++ + G L F RMLS +
Sbjct: 268 NTVLKGYATNGNV-EALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESD 326
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P+ T TVL AC+ L AL G+ +H Y +GL N V++ NALMDMY K
Sbjct: 327 VPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGN--------VYVGNALMDMYAK 378
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + +A VF M KD+ SWN +I G M +G +AL++F M A KPD +TF+G+
Sbjct: 379 CGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGI 438
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L AC+H G + G + M Y ++P IEHY C++DML RAG+L +A MP EA
Sbjct: 439 LCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEA 498
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ V+W LL A R++ N +LAE+A QR+ +LEP + NYV++SNIY G++E+V ++
Sbjct: 499 DGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKV 558
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
MR +K PGCS IE+ D + F S D HP+ + IY L L LR G
Sbjct: 559 AMRDTGFKKLPGCSLIEVNDAVVEFYSLDERHPQIEEIYGVLRGLVKVLRSFG 611
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT + L CA L G+ +H Y +G+ + +L++MY+KC ++ A+
Sbjct: 328 PPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAIS 387
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF + + ++ ++N +I G + L+ F M+ G PD TF ++ C C M
Sbjct: 388 VFRGMDTK-DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGIL-CACTHM 445
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSA------LVNTYLKCQFMEEALKVFEELPLR-DVV 201
++E G + + D I +V+ + +E+A+ ++P+ D V
Sbjct: 446 GLVE----DGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGV 501
Query: 202 LWNAMV 207
+W ++
Sbjct: 502 IWAGLL 507
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 309/579 (53%), Gaps = 53/579 (9%)
Query: 29 PFTLATCIAS-LQLCAHQTNLQK----GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
P +++ + S Q CA + ++ + GQ IH+ ++R G SLI+MY+KC QM
Sbjct: 241 PVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQM 300
Query: 84 KYALFVFNNLSCEPNVFT--YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
A+ VF++L PN+ T +N +I+GF K L+ N M + G P++ T+ ++
Sbjct: 301 DEAVKVFDSL---PNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNML 357
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
C VL + + F+++ V
Sbjct: 358 ASCIKARDVLSARAM-----------------------------------FDKISRPSVT 382
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN +++GY Q +E+FRRM + + R T+ +LS+ +G G VH
Sbjct: 383 TWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSAS 442
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
V+ + + V + L+DMY K +G A IF M E+D+ WNS+++ ++
Sbjct: 443 VRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAF 502
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
F +M G P ++++++ +C+ L+++ GRQIH IV +G +N V++
Sbjct: 503 DFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQN--------VYV 554
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL+DMY KCG+M DA++ F M K++ +WN MI GY +G G++A+D+F M +
Sbjct: 555 GSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQ 614
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
+PD VTF+ VL+ CSHSG + + F MES YG+ P EHYTC+ID LGRAG+L E
Sbjct: 615 RPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVE 674
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
L MP + +P+VW LLAA +H N +L E AA+ +F+L+P + YVL+SNIY + G
Sbjct: 675 ALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLG 734
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
++ + +R M + V K G SWI+ KDG+H F+ +D
Sbjct: 735 RHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFMVAD 773
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 235/499 (47%), Gaps = 57/499 (11%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLA+ +++ C L G+ H ++ G+ ++ +L+ MY+KC ++ A+ +
Sbjct: 141 FTLASVLSA---CGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC---- 145
F+ ++ PN ++ AM+ G L F M + GV D ++ C
Sbjct: 198 FDGMA-SPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACA 256
Query: 146 ---DVMAVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
DV+ + + IH L+ + G D ++G++L++ Y KC M+EA+KVF+ LP V
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTV 316
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN ++ G+ Q G + KALEV M + G + T + +L++ I
Sbjct: 317 SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCI--------------- 361
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
K + V A +F+ + + +WN++++ + Q H T+
Sbjct: 362 --------------------KARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTV 401
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF RM QPD T + +L +CS L L G Q+H V L N D+F+
Sbjct: 402 ELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHS-ASVRFLLHN-------DMFV 453
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+ L+DMY+KCG + A+++F +M+++DV WN MI G + +EA D F M +
Sbjct: 454 ASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGM 513
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
P E ++ ++++C+ + QGR+ + + G + + +IDM + G +++A
Sbjct: 514 MPTESSYASMINSCARLSSVPQGRQIHAQI-VKDGYDQNVYVGSALIDMYAKCGNMDDAR 572
Query: 502 ELALAMPNEANPVVWRTLL 520
M + N V W ++
Sbjct: 573 VFFDCMVTK-NIVAWNEMI 590
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 214/439 (48%), Gaps = 53/439 (12%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ NV ++N +I+ ++ A + L+ + M + G++P +T ++ C V A+ + ++
Sbjct: 102 DRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRR 161
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
HGL K+GLD ++++ +AL+ Y KC +E+A+++F+ + + V + AM+ G Q G
Sbjct: 162 CHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGS 221
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVL--------SALIMMGFFKNGRVVHGIVVKMGYD 267
AL +F RM + G+ + V+ VL S ++ F+ G+ +H ++V+ G+
Sbjct: 222 VDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFG 281
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V N+LIDMY K + EA+++F+ + SWN ++T Q G++ L + + M
Sbjct: 282 SDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLM 341
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+G +P+ VT+S +L +C
Sbjct: 342 EESGSEPNEVTYSNMLASC----------------------------------------- 360
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
K + A+ +F K+S+ V +WN ++ GY + ++ +++F M ++PD T
Sbjct: 361 --IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTT 418
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+LS+CS G L G + + R+ + + + ++DM + GQ+ A + M
Sbjct: 419 LAVILSSCSRLGILDLGTQ-VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRM 477
Query: 508 PNEANPVVWRTLLAASRLH 526
E + V W ++++ +H
Sbjct: 478 -TERDVVCWNSMISGLAIH 495
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 159/296 (53%), Gaps = 16/296 (5%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ Y +A ++ + ++ A + +E+P R+VV WN ++ A+ +ALE++ M
Sbjct: 73 NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EG+ + FT+ VLSA + +GR HG+ VK+G D + V NAL+ MY K V
Sbjct: 133 REGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVE 192
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A+ +F+ M + S+ ++M Q G+ D LRLF RM +G + D V S+VL +C+
Sbjct: 193 DAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCA 252
Query: 348 H--------LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ A G+ IH IV G D + N+L+DMYTKC M +A
Sbjct: 253 QACASEFDVVRAFRLGQCIHALIVRKGFGS--------DQHVGNSLIDMYTKCMQMDEAV 304
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
VF + SWNI+I G+G G +AL++ + M E+ +P+EVT+ +L++C
Sbjct: 305 KVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASC 360
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 140/306 (45%), Gaps = 22/306 (7%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA + + + A + + M ++++ SWN+++ + L L++ ML G
Sbjct: 78 NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
P T ++VL AC +AAL GR+ HG V GL +N +F+ NAL+ MYTKCG
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDEN--------LFVENALLGMYTKCG 189
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ DA +F M+ + S+ M+ G G +AL +F+ MC + ++ D V VL
Sbjct: 190 GVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLG 249
Query: 454 ACSH--SGFLSQGREF-----LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
+C+ + R F + + R G +IDM + Q++EA ++ +
Sbjct: 250 SCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDS 309
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL--EPGHCGNYVLMSNIYVAGGKYE 564
+PN + V W L+ G+ A V L E G N V SN+ + K
Sbjct: 310 LPN-ISTVSWNILITGFGQAGSY----AKALEVLNLMEESGSEPNEVTYSNMLASCIKAR 364
Query: 565 EVLDIR 570
+VL R
Sbjct: 365 DVLSAR 370
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ + NA + + G + A+ + +M ++V SWN +I + EAL+++ M
Sbjct: 73 NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
L P T VLSAC L GR L + G+ + ++ M + G +
Sbjct: 133 REGLVPTHFTLASVLSACGAVAALDDGRRCHGL-AVKVGLDENLFVENALLGMYTKCGGV 191
Query: 498 NEAYEL--ALAMPNEAN 512
+A L +A PNE +
Sbjct: 192 EDAVRLFDGMASPNEVS 208
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 188/586 (32%), Positives = 319/586 (54%), Gaps = 35/586 (5%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCC----QMKYALFVFNNLSCEPNVFT---YNA 104
++IH +L + I + + L + +CC Q +YA L C+ + +++
Sbjct: 18 KQIHCLLLTSPIFYTRRDLF-LSRLLRRCCTAATQFRYA----RRLLCQLQTLSIQLWDS 72
Query: 105 MISGFYSNDFAFKGLDF--FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-----KIH 157
+I F + L F + HMR+ GV+P ++TFP L+K AV +++ + H
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLK------AVFKLRDSNPFQFH 126
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GLD D ++ ++L++ Y + A ++F+ +DVV W AM++G+ + G
Sbjct: 127 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+A+ F M K G+ + TV VL A + + GR VHG+ ++ G V + ++L
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK C +A ++F+ M +++ +W +++ + Q D + +F+ ML + P+
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S+VL AC+H+ AL GR++H Y++ N + N + L+D+Y KCG +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA--------GTTLIDLYVKCGCLE 358
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A +VF ++ +K+V +W MI G+ G ++A D+F M + + P+EVTF+ VLSAC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +GR M+ R+ + +HY C++D+ GR G L EA L MP E VVW
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L + LH + +L + AA RV +L+P H G Y L++N+Y ++EV +R M+ Q
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHP-EAKSIYAELHSLTARLR 621
V K+PG SWIE+K L FI+ D P E+ +Y L ++ ++R
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 7/177 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CAH L +G+ +H YM++ I + + T+LI++Y KC ++ A+ VF L
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV+T+ AMI+GF ++ +A D F M V P++ TF ++ C V E
Sbjct: 368 H-EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 154 KKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
+++ + F + L D Y + +V+ + + +EEA + E +P+ V+W A+
Sbjct: 427 RRLFLSMKGRFNMELKADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 312/586 (53%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y+K + +A+ F +++ E +V ++N MI+ + + L M + GV
Sbjct: 209 SMLAGYAKLYGIDHAIEYFEDMA-ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 267
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SAL+ Y KC +EA +V
Sbjct: 268 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 327
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W ++ G Q F K++E+F +M E + + +F + ++S
Sbjct: 328 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 387
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G++ + V N+LI +Y K + A +F M E+DI SW S++T +
Sbjct: 388 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 447
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLS-AGFQPDLVT 338
Q GN DG L+++ MLS PD VT
Sbjct: 448 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG-LKMYSAMLSQKDVTPDWVT 506
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ + A G QI G+ V GL N V + NA + MY+KCG + +A
Sbjct: 507 YVTLFRGCADIGANKLGDQIIGHTVKAGLILN--------VSVANAAITMYSKCGRISEA 558
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q +F ++ KDV SWN MI GY G GK+A F M KPD +++V VLS CSHS
Sbjct: 559 QKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHS 618
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M +G+ P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 619 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 678
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+L++ IY GK ++ +R MR + +
Sbjct: 679 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 738
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+++ +H F + D SHP+ +I ++ L ++ G
Sbjct: 739 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLG 784
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 55/424 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA +L G+++H+ ++R+ P ++LI +Y+KC K A VFN+L
Sbjct: 272 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 331
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N ++ +I G + K ++ FN MR + D++ LI C + M +
Sbjct: 332 Q-DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 390
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G + + + ++L++ Y KC ++ A VF + RD+V W +M+ Y+QI
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 450
Query: 214 GEFHKALEVFRRM--------------------------------SKEGIWMSRFTVTGV 241
G KA E F M S++ + T +
Sbjct: 451 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+G K G + G VK G V V NA I MY K + EA ++F+++ KD+
Sbjct: 511 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 570
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR----- 356
SWN+++T + Q G + FD MLS G +PD +++ VL CSH + G+
Sbjct: 571 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 630
Query: 357 --QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-W 413
++HG + GL ++ SC ++D+ + G + +A+ + KM K A W
Sbjct: 631 MTRVHG--ISPGL-EHFSC-----------MVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 676
Query: 414 NIMI 417
++
Sbjct: 677 GALL 680
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/585 (22%), Positives = 245/585 (41%), Gaps = 105/585 (17%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C + L + +H ++ G+ + +L++ Y C + A + EP
Sbjct: 10 ALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEP 69
Query: 98 NVFTYNAMI-------------------------------SGFYSNDFAFKGLDFFNHMR 126
NV T+N M+ SG++ GL+ F M
Sbjct: 70 NVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMH 129
Query: 127 QLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF- 184
+ G LP+ +TF C++K C + ++ GL +K D + +ALV+ +++C +
Sbjct: 130 RSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV 189
Query: 185 ------------------------------MEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++ A++ FE++ RDVV WN M+ +Q G
Sbjct: 190 DFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSG 249
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL + M ++G+ + T T L+A + G+ +H V++ V +
Sbjct: 250 RVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVAS 309
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
ALI++Y K EA +F +++++ SW ++ Q ++ LF++M +
Sbjct: 310 ALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAI 369
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D +T++ C + L GRQ+H + +G + + ++N+L+ +Y KCG
Sbjct: 370 DQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRA--------IVVSNSLISLYAKCGD 421
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGY--------------GM-----------------D 423
+++A+ VF+ MS++D+ SW MI Y GM
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQH 481
Query: 424 GQGKEALDMFSCMCEAK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G ++ L M+S M K + PD VT+V + C+ G G + + + G++ +
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVS 540
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
I M + G+++EA +L + N + V W ++ HG
Sbjct: 541 VANAAITMYSKCGRISEAQKL-FDLLNGKDVVSWNAMITGYSQHG 584
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 214/513 (41%), Gaps = 84/513 (16%)
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV--------- 191
++ C A+ + +HG + +GL V++ + L++ YL C + +A ++
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 192 -----------------------FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
F+ +P RDV WN +++GY Q F LE F M +
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHR 130
Query: 229 EGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM-------- 279
G + + FT V+ + +G + + G+ K + V AL+DM
Sbjct: 131 SGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVD 190
Query: 280 -----------------------YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
Y K + A+E FE M E+D+ SWN ++ Q G
Sbjct: 191 FASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGR 250
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
L L M G + D T+++ L AC+ L +L G+Q+H ++ S I
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVI-------RSLPQI 303
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
D ++ +AL+++Y KCGS ++A+ VF + ++ SW ++I G +++++F+ M
Sbjct: 304 DP-YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAG 495
+ D+ ++S C + L GR+ L ++S + + + +I + + G
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCG 420
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ-LEPGHCGNYVLMS 554
L A E + +E + V W +++ A GN I A+ F + + + M
Sbjct: 421 DLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI----IKAREFFDGMATRNAITWNAML 475
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
Y+ G E+ L + M Q K+ W+
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQ---KDVTPDWV 505
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 14 CFNFSTSSGNQTFNH-----PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
CF+ S NQ F LAT I+ C ++ +L G+++HS L++G + +
Sbjct: 351 CFSKSVELFNQMRAELMAIDQFALATLISG---CFNRMDLCLGRQLHSLCLKSGHNRAIV 407
Query: 69 SITSLINMYSKCCQMKYALFVFNNLS------------------------------CEPN 98
SLI++Y+KC ++ A FVF+++S N
Sbjct: 408 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN 467
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
T+NAM+ + + GL ++ M Q V PD T+ L + C D+ A +I
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 527
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G K GL L+V + +A + Y KC + EA K+F+ L +DVV WNAM+ GY+Q G
Sbjct: 528 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 587
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNAL 276
+A + F M +G + VLS G + G++ ++ ++ G G+ + +
Sbjct: 588 QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCM 647
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD 318
+D+ G+ + EA ++ + M K W ++++ + GN +
Sbjct: 648 VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDE 690
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 305/555 (54%), Gaps = 10/555 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ + + G+ +H ++ G D + L++MY+K ++ A VF+ +
Sbjct: 129 ALKASVRSADFRYGRRLHCNAVKAGGADG-FVMNCLVDMYAKAGDLENARKVFDRILGR- 186
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ +M+SG N FA +GL FN MR+ VLP +YT ++ C + ++ + + +H
Sbjct: 187 NVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVH 246
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K G+ + +I +A+++ Y+KC +E+A ++F+EL D+VLW M+ GY Q G
Sbjct: 247 GSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPL 306
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL +F I + T+ VLSA + GR++H + VK+ VMNAL+
Sbjct: 307 DALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALV 366
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K K + EA IF + KD+ +WNS++ + + + L LF +M G PD +
Sbjct: 367 DMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAI 426
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ L AC L L+ G+ H Y V N V++N AL+++Y KC +
Sbjct: 427 SIVNALSACVCLGDLLIGKCFHTYAVKRAFLSN--------VYVNTALLNLYNKCADLPS 478
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ VF++MS+++ +W MI GYGM G ++D+ + M + ++P+EV F +LS CSH
Sbjct: 479 AQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSH 538
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G +S G+ M + + P+++HY C++D+L RAG L EA E MP A+ +W
Sbjct: 539 TGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWG 598
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
L +LH + E A R+ L P YVLMSN+Y + G++++ L IR M+++
Sbjct: 599 AFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERG 658
Query: 578 VRKNPGCSWIELKDG 592
+ K PGCS + L++G
Sbjct: 659 LVKLPGCSSVGLENG 673
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 207/428 (48%), Gaps = 25/428 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L +G+ +H +++ G++ +P ++++MY KC +++ A +F+ L
Sbjct: 225 TMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDEL 284
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ + MI G+ N L F+ + + ++P+ T ++ + +
Sbjct: 285 GFV-DLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLG 343
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ IH + KL + + + +ALV+ Y KC+ + EA +F + +DVV WN+++ GY +
Sbjct: 344 RLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVEN 403
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
++AL +F +M +G ++ LSA + +G G+ H VK + S V V
Sbjct: 404 DMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVN 463
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
AL+++Y K + A +F M E++ +W +++ + G+ G++ L ++ML Q
Sbjct: 464 TALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQ 523
Query: 334 PDLVTFSTVLPACSHLAALMHGR----QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
P+ V F+++L CSH + G+ + Y + K+ +C ++D+
Sbjct: 524 PNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYAC-----------MVDVL 572
Query: 390 TKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQ---GKEALDMFSCMCEAKLKPDE 445
+ G++ +A KM D++ W + G + + G+EA++ L PD+
Sbjct: 573 ARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMV-----LHPDK 627
Query: 446 VTFVGVLS 453
F ++S
Sbjct: 628 PDFYVLMS 635
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
R +H ++ G + L+ Y + A + + D +++ + H
Sbjct: 40 RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAA 99
Query: 315 GNHDGTLRLFD--RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G H L L R D+V S L A A +GR++H V G A
Sbjct: 100 GRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGGA---- 155
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
D F+ N L+DMY K G + +A+ VF ++ ++V SW M+ G +G +E L +
Sbjct: 156 -----DGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLAL 210
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F+ M E ++ P E T VL AC+ G L QGR ++ ++G+V V+DM
Sbjct: 211 FNEMREERVLPSEYTMASVLMACTMLGSLHQGR-WVHGSVIKHGMVFNPFITAAVLDMYV 269
Query: 493 RAGQLNEAYEL 503
+ G++ +A L
Sbjct: 270 KCGEVEDARRL 280
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 191/586 (32%), Positives = 312/586 (53%), Gaps = 43/586 (7%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S++ Y+K + +A+ F +++ E +V ++N MI+ + + L M + GV
Sbjct: 199 SMLAGYAKLYGIDHAIEYFEDMA-ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVR 257
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D T+ + C + ++ K++H V + +D Y+ SAL+ Y KC +EA +V
Sbjct: 258 LDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRV 317
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F L R+ V W ++ G Q F K++E+F +M E + + +F + ++S
Sbjct: 318 FNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +H + +K G++ + V N+LI +Y K + A +F M E+DI SW S++T +
Sbjct: 378 CLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAY 437
Query: 312 EQCGN--------------------------------HDGTLRLFDRMLS-AGFQPDLVT 338
Q GN DG L+++ MLS PD VT
Sbjct: 438 SQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG-LKMYSAMLSQKDVTPDWVT 496
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ T+ C+ + A G QI G+ V GL N V + NA + MY+KCG + +A
Sbjct: 497 YVTLFRGCADIGANKLGDQIIGHTVKAGLILN--------VSVANAAITMYSKCGRISEA 548
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
Q +F ++ KDV SWN MI GY G GK+A F M KPD +++V VLS CSHS
Sbjct: 549 QKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHS 608
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + +G+ + +M +G+ P +EH++C++D+LGRAG L EA +L MP + VW
Sbjct: 609 GLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGA 668
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL+A ++HGN +LAE+AA+ VF+L+ G+Y+L++ IY GK ++ +R MR + +
Sbjct: 669 LLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGI 728
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+KNPG SW+E+++ +H F + D SHP+ +I ++ L ++ G
Sbjct: 729 KKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLG 774
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 197/424 (46%), Gaps = 55/424 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +SL CA +L G+++H+ ++R+ P ++LI +Y+KC K A VFN+L
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N ++ +I G + K ++ FN MR + D++ LI C + M +
Sbjct: 322 Q-DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLG 380
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H L K G + + + ++L++ Y KC ++ A VF + RD+V W +M+ Y+QI
Sbjct: 381 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 440
Query: 214 GEFHKALEVFRRM--------------------------------SKEGIWMSRFTVTGV 241
G KA E F M S++ + T +
Sbjct: 441 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+G K G + G VK G V V NA I MY K + EA ++F+++ KD+
Sbjct: 501 FRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV 560
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR----- 356
SWN+++T + Q G + FD MLS G +PD +++ VL CSH + G+
Sbjct: 561 VSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDM 620
Query: 357 --QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-W 413
++HG + GL ++ SC ++D+ + G + +A+ + KM K A W
Sbjct: 621 MTRVHG--ISPGL-EHFSC-----------MVDLLGRAGHLTEAKDLIDKMPMKPTAEVW 666
Query: 414 NIMI 417
++
Sbjct: 667 GALL 670
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/569 (22%), Positives = 242/569 (42%), Gaps = 80/569 (14%)
Query: 29 PFTLATCIA-SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
P + +A +L+ C + L + +H ++ G+ + +L++ Y C + A
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-----LPDKYTFPCLIK 142
+ EPNV T+N M++G+ + F+ M + V L + P
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 143 CCCDVMAVLEVK-KIHGLVFKLGLDLDVYIGSALVNTYLKCQF----------------- 184
C + E+ ++ GL +K D + +ALV+ +++C +
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195
Query: 185 --------------MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
++ A++ FE++ RDVV WN M+ +Q G +AL + M ++G
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T T L+A + G+ +H V++ V +ALI++Y K EA
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F +++++ SW ++ Q ++ LF++M + D +T++ C +
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 375
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L GRQ+H + +G + + ++N+L+ +Y KCG +++A+ VF+ MS++D+
Sbjct: 376 DLCLGRQLHSLCLKSGHNRA--------IVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 427
Query: 411 ASWNIMILGY--------------GM-----------------DGQGKEALDMFSCMCEA 439
SW MI Y GM G ++ L M+S M
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ 487
Query: 440 K-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
K + PD VT+V + C+ G G + + + G++ + I M + G+++
Sbjct: 488 KDVTPDWVTYVTLFRGCADIGANKLGDQIIG-HTVKAGLILNVSVANAAITMYSKCGRIS 546
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHG 527
EA +L + N + V W ++ HG
Sbjct: 547 EAQKL-FDLLNGKDVVSWNAMITGYSQHG 574
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 214/487 (43%), Gaps = 58/487 (11%)
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRD 199
++ C A+ + +HG + +GL V++ + L++ YL C + +A ++ ++ +
Sbjct: 27 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKE----------------GIWMS------RFT 237
V+ N M+NGYA+ G A E+F RM + G WMS R
Sbjct: 87 VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146
Query: 238 VTGVLSALIMMGFFKNGRVVHGIV---VKMGY------------DSGVPVMNALIDMYGK 282
+L F+ + V +V V+ GY + N+++ Y K
Sbjct: 147 APQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAK 206
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ A+E FE M E+D+ SWN ++ Q G L L M G + D T+++
Sbjct: 207 LYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSS 266
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ L +L G+Q+H ++ S ID ++ +AL+++Y KCGS ++A+ VF
Sbjct: 267 LTACARLFSLGWGKQLHAKVI-------RSLPQIDP-YVASALIELYAKCGSFKEAKRVF 318
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+ ++ SW ++I G +++++F+ M + D+ ++S C + L
Sbjct: 319 NSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLC 378
Query: 463 QGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
GR+ L ++S + + + +I + + G L A E + +E + V W +++
Sbjct: 379 LGRQLHSLCLKSGHNRAIVVSN--SLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMIT 435
Query: 522 ASRLHGNTDLAEIAAQRVFQ-LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
A GN I A+ F + + + M Y+ G E+ L + M Q K
Sbjct: 436 AYSQIGNI----IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQ---K 488
Query: 581 NPGCSWI 587
+ W+
Sbjct: 489 DVTPDWV 495
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 14 CFNFSTSSGNQTFNH-----PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
CF+ S NQ F LAT I+ C ++ +L G+++HS L++G + +
Sbjct: 341 CFSKSVELFNQMRAELMAIDQFALATLISG---CFNRMDLCLGRQLHSLCLKSGHNRAIV 397
Query: 69 SITSLINMYSKCCQMKYALFVFNNLS------------------------------CEPN 98
SLI++Y+KC ++ A FVF+++S N
Sbjct: 398 VSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN 457
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
T+NAM+ + + GL ++ M Q V PD T+ L + C D+ A +I
Sbjct: 458 AITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQII 517
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G K GL L+V + +A + Y KC + EA K+F+ L +DVV WNAM+ GY+Q G
Sbjct: 518 GHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGK 577
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPVMNAL 276
+A + F M +G + VLS G + G++ ++ ++ G G+ + +
Sbjct: 578 QAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCM 637
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHD 318
+D+ G+ + EA ++ + M K W ++++ + GN +
Sbjct: 638 VDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDE 680
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/606 (32%), Positives = 339/606 (55%), Gaps = 28/606 (4%)
Query: 28 HP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
HP FT + +++ CA L+ G+++HS +++ + +LI+MY+K +K
Sbjct: 315 HPDEFTYTSILST---CACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKE 371
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A F +++ ++ ++NA+I G+ + F M G++PD+ + ++ C
Sbjct: 372 AGKHFEHMTYRDHI-SWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACG 430
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
++ + ++ H L KLGL+ +++ GS+L++ Y KC +++A K + +P R VV NA
Sbjct: 431 NIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNA 490
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL-----SALIMMGFFKNGRVVHGI 260
++ GYA + +++ + M G+ S T ++ SA +++G +H
Sbjct: 491 LIAGYA-LKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGL-----QIHCA 544
Query: 261 VVKMGYDSGVPVM-NALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHD 318
+VK G G + +L+ MY + + +A +F E K I W ++++ H Q D
Sbjct: 545 IVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSD 604
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
L L+ M PD TF TVL AC+ L++L GR+IH I G D+D+
Sbjct: 605 VALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGF-------DLDE 657
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+ ++AL+DMY KCG ++ + VF ++ +KKDV SWN MI+G+ +G K AL +F M
Sbjct: 658 L-TSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMT 716
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
++ + PD+VTF+GVL+ACSH+G++ +GR+ +M + YG+ P ++HY C++D+LGR G L
Sbjct: 717 QSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFL 776
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E + E N ++W LL A R+HG+ + AA+++ +LEP YVL+SN+Y
Sbjct: 777 KEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMY 836
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
A G ++E +R TM +++++K PGCSWI + + F++ D SH I L LT
Sbjct: 837 AASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLT 896
Query: 618 ARLREH 623
A ++++
Sbjct: 897 ALIKDN 902
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 263/509 (51%), Gaps = 58/509 (11%)
Query: 7 RINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
R+ F + F S S +Q FT A +L CA NL G+ +HS ++++G+ +
Sbjct: 30 RVLQFYASFMNSGHSPDQ-----FTFAV---TLSACAKLQNLHLGRAVHSCVIKSGLEST 81
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT--YNAMISGFYSNDFAFKGLDFFNH 124
+LI++Y+KC + A +F + P++ T + A+ISG+ + L F+
Sbjct: 82 SFCQGALIHLYAKCNSLTCARTIFASAPF-PHLHTVSWTALISGYVQAGLPHEALHIFDK 140
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
MR V PD+ +A++ V +N Y+
Sbjct: 141 MRNSAV-PDQ-------------VALVTV----------------------LNAYISLGK 164
Query: 185 MEEALKVFEE--LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+++A ++F++ +P+R+VV WN M++G+A+ + +AL F +MSK G+ SR T+ VL
Sbjct: 165 LDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVL 224
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
SA+ + +G +VH +K G++S + V ++LI+MYGK + +A ++F+ + +K++
Sbjct: 225 SAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMI 284
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
WN+++ V+ Q G + LF M+S G PD T++++L C+ L GRQ+H I
Sbjct: 285 VWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAI 344
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+ N +F+NNAL+DMY K G++++A F M+ +D SWN +I+GY
Sbjct: 345 IKKRFTSN--------LFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQ 396
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+ A +F M + PDEV+ +LSAC + L G++F + + G+ +
Sbjct: 397 EEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQF-HCLSVKLGLETNLF 455
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+ +IDM + G + +A++ +MP +
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMPERS 484
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 207/402 (51%), Gaps = 10/402 (2%)
Query: 59 LRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-PNVFTYNAMISGFYSNDFAFK 117
+R + +++ +++N Y ++ A +F + NV +N MISG +
Sbjct: 141 MRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEE 200
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L FF+ M + GV + T ++ + A+ +H K G + +Y+ S+L+N
Sbjct: 201 ALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLIN 260
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y KCQ ++A +VF+ + +++++WNAM+ Y+Q G +E+F M GI FT
Sbjct: 261 MYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFT 320
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
T +LS + + GR +H ++K + S + V NALIDMY K + EA + FE M
Sbjct: 321 YTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMT 380
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+D SWN+I+ + Q G LF RM+ G PD V+ +++L AC ++ L G+Q
Sbjct: 381 YRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQ 440
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
H V GL N +F ++L+DMY+KCG ++DA ++ M ++ V S N +I
Sbjct: 441 FHCLSVKLGLETN--------LFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALI 492
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
GY + KE++++ M LKP E+TF ++ C S
Sbjct: 493 AGYALKNT-KESINLLHEMQILGLKPSEITFASLIDVCKGSA 533
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 56/419 (13%)
Query: 89 VFNNLSCEPNVFTYNAMISG--FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
V + C V +N + G YS++ + L F+ G PD++TF + C
Sbjct: 3 VAAGVKCLLRVRQWNWRVQGTKHYSSE---RVLQFYASFMNSGHSPDQFTFAVTLSACAK 59
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV--VLWN 204
+ + + +H V K GL+ + AL++ Y KC + A +F P + V W
Sbjct: 60 LQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWT 119
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A+++GY Q G H+AL +F +M +N V + +
Sbjct: 120 ALISGYVQAGLPHEALHIFDKM-------------------------RNSAVPDQVAL-- 152
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLR 322
V V+NA I + GK + +A ++F+ M +++ +WN +++ H + +++ L
Sbjct: 153 -----VTVLNAYISL-GK---LDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALA 203
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
F +M G + T ++VL A + LAAL HG +H + + G + +++
Sbjct: 204 FFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESS--------IYVA 255
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
++L++MY KC DA+ VF +S+K++ WN M+ Y +G +++F M +
Sbjct: 256 SSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIH 315
Query: 443 PDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
PDE T+ +LS C+ +L GR+ +++ R+ + +IDM +AG L EA
Sbjct: 316 PDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRF--TSNLFVNNALIDMYAKAGALKEA 372
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 314/591 (53%), Gaps = 9/591 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + LQ G+ + + T T+LI MY++C + A VF +
Sbjct: 263 TFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRM 322
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ T++A+I+ F + + L +F M+Q G+LP++ TF L+ + E+
Sbjct: 323 K-QTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL 381
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+IH L+ + GLD + +ALVN Y +C+ ++A VF++L L +++ WN+M+ Y Q
Sbjct: 382 SRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQC 441
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
AL++FR M ++GI R +L A + + ++VH V + G V
Sbjct: 442 ERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQ 501
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
+L++MY K + A I + M+E+ I +WN ++ + G L + ++
Sbjct: 502 TSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIP 561
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
D VTF +VL AC+ +L G+ IH V GL DV + NAL +MY+KCG
Sbjct: 562 VDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD--------SDVIVKNALTNMYSKCG 613
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
SM +A+ +F M + SWN M+ Y G+ +E L + M + +K + +TFV VLS
Sbjct: 614 SMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLS 673
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
+CSH+G +++G ++ + G+ EHY C++D+LGRAG+L EA + MP E
Sbjct: 674 SCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGI 733
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
V W +LL A R+ + D ++AA ++ +L+PG+ V++SNIY G ++ +R M
Sbjct: 734 VTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAM 793
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V+K PG S I++K+ +H F D SHP A IY ++ L +RE G
Sbjct: 794 ASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAG 844
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 256/486 (52%), Gaps = 17/486 (3%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+KG+ IHS + + T+L+N Y+KC + A VF+ + C +V T+N+MIS
Sbjct: 176 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSMIS 234
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ ++ + + F M+Q G D+ TF ++ C + + K + + + +L
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+++G+AL+ Y +C+ E+A +VF + +++ W+A++ +A G +AL FR M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EGI +R T +L+ + +H ++ + G D + NAL+++YG+ +
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A +F+ +E ++ SWNS++ ++ QC HD L+LF M G QPD V F T+L AC+
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 348 HLAALMHGRQ---IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ HGR +H + +GL + + +L++MY K G + A+++ +
Sbjct: 475 IGS---HGRTRKLVHQCVEESGLGGSP--------LVQTSLVNMYAKAGELDVAEVILQE 523
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M ++ + +WN++I GY + G+ +EAL+ + + + D+VTF+ VL+AC+ S L++G
Sbjct: 524 MDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEG 583
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ + G+ + + +M + G + A + +MP + V W +L A
Sbjct: 584 K-MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS-AVSWNGMLQAYA 641
Query: 525 LHGNTD 530
HG ++
Sbjct: 642 QHGESE 647
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 261/513 (50%), Gaps = 17/513 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A L C L+ G +H+ L G + L T+L+NMY KC + A VF +
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 94 SCEPNVFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E NV T+NAM+ + +K ++ F M GV + TF ++ D A+ +
Sbjct: 120 A-EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K IH V + LDV++ +ALVNTY KC + +A KVF+ +P R V WN+M++ Y+
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+A +F+RM +EG R T +L A + ++G+ V + + ++ + V
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
ALI MY + + +A ++F M++ ++ +W++I+T G+ LR F M G
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ VTF ++L + + L +IH I +GL D M NAL+++Y +C
Sbjct: 359 LPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD--------DTTTMRNALVNVYGRC 410
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
S DA+ VF ++ ++ SWN MI Y + +AL +F M + ++PD V F+ +L
Sbjct: 411 ESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTIL 470
Query: 453 SACSHSGFLSQGREFLP--LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
AC+ G + R+ + + ES G P ++ T +++M +AG+L+ A E+ L +E
Sbjct: 471 GACT-IGSHGRTRKLVHQCVEESGLGGSPLVQ--TSLVNMYAKAGELDVA-EVILQEMDE 526
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
W L+ LHG + A A Q+ QLE
Sbjct: 527 QQITAWNVLINGYALHGRSREALEAYQK-LQLE 558
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 237/510 (46%), Gaps = 52/510 (10%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MYS+C + A+ F + NV ++N MIS + S + L F+ M GV P+
Sbjct: 1 MYSRCGSLGDAVAAFGKIRAR-NVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI 59
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
T ++ C + + +H L + G + + +AL+N Y KC + +A VFEE+
Sbjct: 60 TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 196 PLRDVVLWNAMVNGYAQIGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
++VV WNAM+ Y+ G K A+E+F RM EG+ + T VL++++ + G
Sbjct: 120 AEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKG 179
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +H V + + V V AL++ Y K + +A ++F+ M + + +WNS+++ +
Sbjct: 180 KFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
+F RM G + D VTF ++L AC + L HG+ + I
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL----- 294
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
D+F+ AL+ MY +C S DA VF +M + ++ +W+ +I + G EAL F
Sbjct: 295 ---DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFR 351
Query: 435 CMCEAKLKPDEVTFVGVLSA-CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + + P+ VTF+ +L+ + SG R + L+ + +G+ T ++++ GR
Sbjct: 352 MMQQEGILPNRVTFISLLNGFTTPSGLEELSR--IHLLITEHGLDDTTTMRNALVNVYGR 409
Query: 494 AGQLNEAYEL--ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYV 551
++A + L +P N + W +++
Sbjct: 410 CESPDDARTVFDQLELP---NLISWNSMIG------------------------------ 436
Query: 552 LMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
IYV ++++ L + TM+QQ ++ +
Sbjct: 437 ----IYVQCERHDDALQLFRTMQQQGIQPD 462
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T I+ L C T+L +G+ IHS + G+ + +L NMYSKC M+ A
Sbjct: 561 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARR 620
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+++ V ++N M+ + + + + L M Q GV + TF ++ C
Sbjct: 621 IFDSMPIRSAV-SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 679
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAM 206
+ E + H L G+++ LV+ + ++EA K ++PL +V W ++
Sbjct: 680 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASL 739
Query: 207 V 207
+
Sbjct: 740 L 740
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/561 (34%), Positives = 312/561 (55%), Gaps = 19/561 (3%)
Query: 70 ITS--LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
ITS LI+MY KC + A VF+++ E NV ++ A++SG N L F M +
Sbjct: 405 ITSNYLIDMYCKCREQLIAYKVFDSMP-ERNVVSWTALMSGHVLNGDLNGSLSLFTEMGR 463
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G+ P+++TF +K C + A+ + +IHG K+G ++ V +G++LV+ Y KC + E
Sbjct: 464 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 523
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI--WMSRFTVTGVLSAL 245
A KVF + R ++ WNAM+ GY G +AL F M + I FT+T +L A
Sbjct: 524 AEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKAC 583
Query: 246 IMMGFFKNGRVVHGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
G G+ +HG +V+ G+ S + +L+D+Y K + A + F+ ++EK + S
Sbjct: 584 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMIS 643
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W+S++ + Q G+ + LF R+ Q D S+++ + A L G+Q+ +V
Sbjct: 644 WSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVV 703
Query: 364 --VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+GL + ++N+L+DMY KCG + +A+ F +M KDV SW +MI GYG
Sbjct: 704 KLPSGL----------ETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYG 753
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
G GK+A+ +F+ M ++PDEV ++ VLSACSHSG + +G E + G+ P +
Sbjct: 754 KHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRV 813
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
EHY CV+D+LGRAG+L EA L MP + N +W+TLL+ R+HG+ +L + + + +
Sbjct: 814 EHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 873
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
++ + NYV+MSN+Y G + E + R + ++K G SW+E++ +H F S +
Sbjct: 874 IDGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGED 933
Query: 602 SHPEAKSIYAELHSLTARLRE 622
SHP I L + RLRE
Sbjct: 934 SHPLTLVIQETLKEVERRLRE 954
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 194/371 (52%), Gaps = 13/371 (3%)
Query: 161 FKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
F+L G L++ + L++ Y KC+ A KVF+ +P R+VV W A+++G+ G+ + +
Sbjct: 395 FRLSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGS 454
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
L +F M ++GI+ + FT + L A ++ + G +HG +K+G++ V V N+L+DM
Sbjct: 455 LSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 514
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ--PDLV 337
Y K + EA ++F M + + SWN+++ + G L F M A + PD
Sbjct: 515 YSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEF 574
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +++L ACS + G+QIHG++V +G S + +L+D+Y KCG++
Sbjct: 575 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT------ITGSLVDLYVKCGNLFS 628
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ F ++ +K + SW+ +ILGY +G EA+ +F + E + D ++ +
Sbjct: 629 ARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFAD 688
Query: 458 SGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
L QG++ L ++ G+ ++ + ++DM + G ++EA E A + + W
Sbjct: 689 FALLQQGKQMQALVVKLPSGLETSVSN--SLVDMYLKCGLVDEA-EKCFAEMQLKDVISW 745
Query: 517 RTLLAASRLHG 527
++ HG
Sbjct: 746 TVMITGYGKHG 756
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 233/486 (47%), Gaps = 52/486 (10%)
Query: 19 TSSGNQ-TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
T G Q + + FT +T +L+ C L+KG +IH + L+ G SL++MY
Sbjct: 459 TEMGRQGIYPNEFTFST---NLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMY 515
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV--LPDKY 135
SKC ++ A VF + ++ ++NAMI+G+ + + L F M++ + PD++
Sbjct: 516 SKCGRINEAEKVFRWMVGR-SLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEF 574
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVFE 193
T L+K C + K+IHG + + G I +LV+ Y+KC + A K F+
Sbjct: 575 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFD 634
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++ + ++ W++++ GYAQ G+F +A+ +F+R+ + + F ++ ++ +
Sbjct: 635 QIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQ 694
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ + +VVK+ V N+L+DMY K V EA + F M+ KD+ SW ++T + +
Sbjct: 695 GKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGK 754
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G + +F++ML +PD V + VL ACSH +G+ K G
Sbjct: 755 HGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSH----------------SGMIKEG-- 796
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+++F ++++ T+ K V + ++ G G+ KEA +
Sbjct: 797 ---EELF-----------------SKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLV 836
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +KP+ + +LS C G + G+E ++ G P +Y + ++ G+
Sbjct: 837 DTM---PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPA--NYVMMSNLYGQ 891
Query: 494 AGQLNE 499
AG NE
Sbjct: 892 AGYWNE 897
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/597 (32%), Positives = 325/597 (54%), Gaps = 27/597 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ +N+ G+ IH Y+++ G + T+L MY +C + + A +F+ S +
Sbjct: 132 LRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDL 191
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ + G ND F M ++PD +TF L++ + ++ K +H
Sbjct: 192 GWPSSLTTEG-PQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHC 250
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ L D+ + +A+++ Y K + + +A K+F+++P +D V+WN M+ YA+ G+ +
Sbjct: 251 IAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTE 310
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
LE+F+ M++ GI FT V+S++ + G+ H +++ G DS V V N+LID
Sbjct: 311 CLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLID 370
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY + K + A +IF M +K + L LF +M S G Q D V
Sbjct: 371 MYCECKILDSACKIFNWMTDKSSLT----------------ALSLFSKMKSDGIQADFVI 414
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+LPA H+ AL + + +HGY + GL S +N AL+ Y KCGS+ A
Sbjct: 415 MINILPAFVHIGALENVKYLHGYSMKLGLTSLPS--------LNTALLITYAKCGSIEMA 466
Query: 399 QMVFT--KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
Q +F K+ KD+ WN MI + G + +++ M + KPD+VTF+G+L+AC
Sbjct: 467 QRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACV 526
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+SG + +G+EF M YG P+ EHY C++++LGRAG ++EA EL MP + + VW
Sbjct: 527 NSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVW 586
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL+A ++H + LAE AA+++ +EP + GNY+L+SNIY A GK++ V +R +R +
Sbjct: 587 GPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNK 646
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFD 633
++K PGCSW+E+ + F +D++HP A IY L +L ++E + TL +
Sbjct: 647 GLKKIPGCSWLEINGHVTEFRVADQTHPRAGDIYTILGNLELEIKEVREKSPDTLVN 703
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 230/505 (45%), Gaps = 28/505 (5%)
Query: 26 FNHPFTLATCIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
N P T + + +L L + N +Q Q+IH+ + G +P + LI+ Y+ +
Sbjct: 17 LNFPATQSRLLNTLSLLFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLN 76
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
++L VF ++ +PN+ +NA++ + + L + M + PD+ T+P +++ C
Sbjct: 77 HSLQVFCSV-IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSC 135
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
V + IHG + KLG DL + +AL Y +C E A ++F++ ++D+ +
Sbjct: 136 SSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPS 195
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
++ Q VF RM E + FT +L + + + ++VH I +
Sbjct: 196 SLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVS 255
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ V A++ +Y K + + +A ++F+ M EKD WN ++ + + G L LF
Sbjct: 256 KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELF 315
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M +G + DL T V+ + + L + G+Q H +I+ NG V ++N+
Sbjct: 316 KSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNG--------SDSQVSVHNS 367
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY +C + A +F M+ K + AL +FS M ++ D
Sbjct: 368 LIDMYCECKILDSACKIFNWMTDKSSLT----------------ALSLFSKMKSDGIQAD 411
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL- 503
V + +L A H G L + ++L + G+ T ++ + G + A L
Sbjct: 412 FVIMINILPAFVHIGAL-ENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLF 470
Query: 504 ALAMPNEANPVVWRTLLAASRLHGN 528
++ + ++W ++++A HG+
Sbjct: 471 EEEKIDDKDLIMWNSMISAHANHGD 495
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 320/592 (54%), Gaps = 13/592 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T A L +C NL+ G+ +H ++++G+ + SL++MYS+ + + A FVF+ +
Sbjct: 263 TISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKM 322
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E ++ ++N+M++ N + L+ M Q + TF + C ++ +
Sbjct: 323 R-ERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL--- 378
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +H V LGL ++ IG+ALV Y K M A +V + +P RD V WNA++ G+A
Sbjct: 379 KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADN 438
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG-FFKNGRVVHGIVVKMGYDSGVPV 272
E + A+E F + +EG+ ++ T+ +LSA + +G +H +V G++ V
Sbjct: 439 KEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFV 498
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
++LI MY + + + IF+++ K+ +WN+I++ + G + L+L +M + G
Sbjct: 499 QSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGI 558
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D +FS +L L G+Q+H I+ +G N ++ NA MDMY KC
Sbjct: 559 HLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESND--------YVLNATMDMYGKC 610
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + D + + + SWNI+I G ++A + F M + L+PD VTFV +L
Sbjct: 611 GEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLL 670
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSH G + +G + M +++GV IEH C+ID+LGRAG+L EA MP
Sbjct: 671 SACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPT 730
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+VWR+LLAA ++HGN +LA AA R+F+L+ YVL SN+ + ++ +V ++R
Sbjct: 731 DLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQ 790
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M N++K P CSW++LK+ + TF D+ HP+ IYA+L L +RE G
Sbjct: 791 MESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAG 842
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 253/497 (50%), Gaps = 23/497 (4%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MYSK +++A VF+ + E N ++N ++SGF + K + FF HM + GV P Y
Sbjct: 1 MYSKFGSIEHAQHVFDKMP-ERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59
Query: 136 TFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
L+ C + E ++H V K GL DV++G++L++ Y ++ E VF+E
Sbjct: 60 VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ ++V W +++ GYA G + + V+RR+ ++G++ + + V+ + ++ G
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
V G V+K G D+ V V N+LI M+G + EA +F+ M+E+D SWNSI+T
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G+ + +L F +M + D +T S +LP C L GR +HG +V +GL N
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESN---- 295
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
V + N+L+ MY++ G DA+ VF KM ++D+ SWN M+ + +G AL++
Sbjct: 296 ----VCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLI 351
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + + + VTF LSAC + L F+ L+ + ++ ++ M G+
Sbjct: 352 EMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIG----NALVTMYGKF 407
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI-AAQRVFQL--EPGHCGNYV 551
G + A + MP+ + V W L+ G+ D E AA F L E G NY+
Sbjct: 408 GSMAAAQRVCKIMPDR-DEVTWNALIG-----GHADNKEPNAAIEAFNLLREEGVPVNYI 461
Query: 552 LMSNIYVAGGKYEEVLD 568
+ N+ A +++LD
Sbjct: 462 TIVNLLSAFLSPDDLLD 478
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/528 (24%), Positives = 252/528 (47%), Gaps = 22/528 (4%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFV 89
+AT I S C + G ++ ++++G+ D+ +S+ SLI+M+ C ++ A V
Sbjct: 162 AMATVIRS---CGVLVDKMLGYQVLGSVIKSGL-DTTVSVANSLISMFGNCDSIEEASCV 217
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ E + ++N++I+ N K L++F+ MR D T L+ C
Sbjct: 218 FDDMK-ERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQN 276
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +HG+V K GL+ +V + ++L++ Y + E+A VF ++ RD++ WN+M+
Sbjct: 277 LRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMAS 336
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ G + +ALE+ M + + T T LSA + K +VH V+ +G
Sbjct: 337 HVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLK---IVHAFVILLGLHHN 393
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + NAL+ MYGK + A + ++M ++D +WN+++ H + + F+ +
Sbjct: 394 LIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLRE 453
Query: 330 AGFQPDLVTFSTVLPA-CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + +T +L A S L HG IH +IVV G + F+ ++L+ M
Sbjct: 454 EGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL--------ETFVQSSLITM 505
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y +CG + + +F ++ K+ ++WN ++ G G+EAL + M + D+ +F
Sbjct: 506 YAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSF 565
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ + L +G++ L+ ++G +DM G+ G++++ + + L P
Sbjct: 566 SVAHAIIGNLTLLDEGQQLHSLI-IKHGFESNDYVLNATMDMYGKCGEIDDVFRI-LPQP 623
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMS 554
+ W L++A HG A A + L P H L+S
Sbjct: 624 RSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 326/590 (55%), Gaps = 16/590 (2%)
Query: 42 CAHQTNLQKGQEIHS-YMLRTGIID-SPLS-ITSLINMYSKCCQMKYALFVFNNLSCEPN 98
CA L G+ +H+ +++R + S +S + SL+++Y KC Q+ A +F+ + N
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLR-N 80
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++N +++G+ + L F +M L P++Y F + C V E + H
Sbjct: 81 VVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCH 140
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP---LRDVVLWNAMVNGYAQIG 214
GL+FK GL Y+ SALV+ Y +C +E AL+V + +P + D+ +N+++N + G
Sbjct: 141 GLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESG 200
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A+EV RRM E + T GV+ + + G VH +++ G V +
Sbjct: 201 RGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGS 260
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
LIDMYGK V A +F+ ++ +++ W ++MT + Q G + +L LF M G P
Sbjct: 261 MLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLP 320
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ TF+ +L AC+ +AAL HG +H + G + V + NAL++MY+K GS
Sbjct: 321 NEYTFAVLLNACAGIAALRHGDLLHARVEKLGFK--------NHVIVRNALINMYSKSGS 372
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ + VFT M +D+ +WN MI GY G GK+AL +F M A+ P+ VTF+GVLSA
Sbjct: 373 IDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSA 432
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
SH G + +G +L + + + P +EHYTC++ +L RAG L+EA + + V
Sbjct: 433 YSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVV 492
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
WRTLL A +H N DL A+ V Q++P G Y L+SN+Y +++ V+ IR MR
Sbjct: 493 AWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMR 552
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++N++K PG SW+++++ +H F+S +HPE+ IY ++ L A ++ G
Sbjct: 553 ERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLG 602
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 199/384 (51%), Gaps = 10/384 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L C+H +++G + H + + G++ ++L++MYS+C ++ AL V + + E
Sbjct: 122 TALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGE 181
Query: 97 --PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
++F+YN++++ + + ++ M V D T+ ++ C + +
Sbjct: 182 HVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGL 241
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H + + GL D ++GS L++ Y KC + A VF+ L R+VV+W A++ Y Q G
Sbjct: 242 RVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNG 301
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
F ++L +F M +EG + +T +L+A + ++G ++H V K+G+ + V V N
Sbjct: 302 YFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRN 361
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
ALI+MY K + + +F M +DI +WN+++ + G L++F M+SA P
Sbjct: 362 ALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECP 421
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VTF VL A SHL G G+ +N L +N + + + ++ + ++ G
Sbjct: 422 NYVTFIGVLSAYSHL-----GLVKEGFYYLNHLMRNFKIEPGLEHY--TCMVALLSRAGL 474
Query: 395 MRDAQ-MVFTKMSKKDVASWNIMI 417
+ +A+ + T K DV +W ++
Sbjct: 475 LDEAENFMKTTQVKWDVVAWRTLL 498
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + + LCA +LQ G +H+ +LR G++ + LI+MY KC ++ A VF+
Sbjct: 222 VTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDG 281
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L NV + A+++ + N + + L+ F M + G LP++YTF L+ C + A+
Sbjct: 282 LQ-NRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRH 340
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+H V KLG V + +AL+N Y K ++ + VF ++ RD++ WNAM+ GY+
Sbjct: 341 GDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSH 400
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVP 271
G +AL+VF+ M + T GVLSA +G K G ++ ++ + G+
Sbjct: 401 HGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLE 460
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
++ + + + EA + + K D+ +W +++ N+D R+ + +L
Sbjct: 461 HYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQ 519
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/660 (29%), Positives = 340/660 (51%), Gaps = 88/660 (13%)
Query: 38 SLQLCAHQTNLQK----GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN- 92
S+ L H L K ++IH ++++ + +L++ Y+K ++ YA VF+
Sbjct: 11 SMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70
Query: 93 -----------------LSCEP------------NVFTYNAMISGFYSNDFAFKGLDFFN 123
L+C P ++ ++N++IS + F + + +N
Sbjct: 71 PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK--------IHGLVFKLGLDLDVYIGSAL 175
M G L + M +L K+ +HG V K G V++GS L
Sbjct: 131 LMLYNGPFN-------LNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPL 183
Query: 176 VNTY-------------------------------LKCQFMEEALKVFEELPLRDVVLWN 204
V+ Y ++C +E++ ++F ++ +D + W
Sbjct: 184 VDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWT 243
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM+ G+ Q G +A+++FR M E + M ++T VL+A + + G+ VH +++
Sbjct: 244 AMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT 303
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y + V +AL+DMY K K + A +F M K++ SW +++ + Q G + +++F
Sbjct: 304 DYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIF 363
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
M + G +PD T +V+ +C++LA+L G Q H +V+GL I + ++NA
Sbjct: 364 CDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL--------ISFITVSNA 415
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ +Y KCGS+ D+ +F++MS D SW ++ GY G+ E L +F M KPD
Sbjct: 416 LVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPD 475
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+VTF+GVLSACS +G + +G + M + ++P +HYTC+ID+ RAG+L EA +
Sbjct: 476 KVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFI 535
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP + + W +LL++ R H N ++ + AA+ + +LEP + +Y+L+S+IY A GK+E
Sbjct: 536 NKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWE 595
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
EV ++R MR + +RK PGCSWI+ K+ +H F + D+S+P + IY+EL L ++ + G
Sbjct: 596 EVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEG 655
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 202/422 (47%), Gaps = 42/422 (9%)
Query: 26 FNHPFTLATCIAS--LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
+N PF L S L L + Q + G ++H ++++ G + L++MYSK +
Sbjct: 134 YNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLV 193
Query: 84 KYALFVFNNLSCEPNVFTYN-------------------------------AMISGFYSN 112
A F+ + E NV YN AMI+GF N
Sbjct: 194 FCARQAFDEMP-EKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQN 252
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ +D F MR + D+YTF ++ C VMA+ E K++H + + ++++G
Sbjct: 253 GLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG 312
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SALV+ Y KC+ ++ A VF ++ ++VV W AM+ GY Q G +A+++F M GI
Sbjct: 313 SALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIE 372
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
FT+ V+S+ + + G H + G S + V NAL+ +YGK + ++ +
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M D SW ++++ + Q G + TLRLF+ ML+ GF+PD VTF VL ACS +
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVA 411
G QI + K I+D + ++D++++ G + +A+ KM D
Sbjct: 493 QKGNQI-----FESMIKEHRIIPIEDHY--TCMIDLFSRAGRLEEARKFINKMPFSPDAI 545
Query: 412 SW 413
W
Sbjct: 546 GW 547
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/487 (36%), Positives = 289/487 (59%), Gaps = 19/487 (3%)
Query: 147 VMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYL----KCQFMEEALKVFE--ELPLRD 199
V ++ ++++IH + G+ + D +G L+ YL M A KVF E P+ +
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLI-FYLVSLPSPPPMSYAHKVFSKIEKPI-N 84
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVH 258
V +WN ++ GYA+IG A ++R M G + T ++ A+ M + G +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
+V++ G+ S + V N+L+ +Y V A ++F+ M EKD+ +WNS++ + G +
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
L L+ M S G +PD T ++L AC+ + AL G+++H Y++ GL +N
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN-------- 256
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ +N L+D+Y +CG + +A+ +F +M K+ SW +I+G ++G GKEA+++F M
Sbjct: 257 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 316
Query: 439 AK-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ L P E+TFVG+L ACSH G + +G E+ M Y + P IEH+ C++D+L RAGQ+
Sbjct: 317 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
+AYE +MP + N V+WRTLL A +HG++DLAE A ++ QLEP H G+YVL+SN+Y
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMY 436
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ ++ +V IR M + V+K PG S +E+ + +H F+ D+SHP++ +IYA+L +T
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT 496
Query: 618 ARLREHG 624
RLR G
Sbjct: 497 GRLRSEG 503
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 173/328 (52%), Gaps = 9/328 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTG--IIDSPLS---ITSLINMYSKCCQMKYALFV 89
CI LQ +++ K ++IH++ +R G I D+ L I L+++ S M YA V
Sbjct: 18 CINLLQTYG-VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKV 75
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVM 148
F+ + NVF +N +I G+ + + MR G++ PD +T+P LIK +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V + IH +V + G +Y+ ++L++ Y C + A KVF+++P +D+V WN+++N
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A+ G+ +AL ++ M+ +GI FT+ +LSA +G G+ VH ++K+G
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ N L+D+Y + V EA +F+ M +K+ SW S++ G + LF M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 329 SA-GFQPDLVTFSTVLPACSHLAALMHG 355
S G P +TF +L ACSH + G
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEG 343
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L G+ +H YM++ G+ + S L+++Y++C +++ A +F+ +
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLE 152
+ N ++ ++I G N F + ++ F +M G+LP + TF ++ C V E
Sbjct: 284 -VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ + + ++ + +V+ + +++A + + +P++ +VV+W +
Sbjct: 343 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 402
Query: 207 -VNGYAQIGEFHK 218
V+G + + EF +
Sbjct: 403 TVHGDSDLAEFAR 415
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 315/594 (53%), Gaps = 17/594 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF + CA ++ + +H++++++ T+ ++M+ KC + Y
Sbjct: 53 FTFPFVA-------KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDY 105
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF + E + T+NAM+SGF + K F MR + PD T LI+
Sbjct: 106 AAKVFERMP-ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLW 203
++ ++ +H + +LG+D+ V + + ++TY KC ++ A VFE + R VV W
Sbjct: 165 FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M Y+ GE A ++ M +E T + ++ GR++H +
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+G D + +N I MY K + A +F++M + SW +++ + + G+ D L L
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F M+ +G +PDLVT +++ C +L G+ I + G CK D+V + N
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG------CKR-DNVMICN 397
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+DMY+KCGS+ +A+ +F +K V +W MI GY ++G EAL +FS M + KP
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ +TF+ VL AC+HSG L +G E+ +M+ Y + P ++HY+C++D+LGR G+L EA EL
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
M + + +W LL A ++H N +AE AA+ +F LEP YV M+NIY A G +
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ IR M+Q+N++K PG S I++ H+F + H E + IY L+ L+
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 209/433 (48%), Gaps = 13/433 (3%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N I + + + L F M++ G P+ +TFP + K C + V + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K DV++G+A V+ ++KC ++ A KVFE +P RD WNAM++G+ Q G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KA +FR M I TV ++ + K +H + +++G D V V N I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 278 DMYGKGKCVGEALEIFEMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
YGK + A +FE ++ D + SWNS+ + G L+ ML F+PD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
L TF + +C + L GR IH + + G+ +DI+ + N + MY+K
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAI-----HLGTDQDIEAI---NTFISMYSKSEDT 307
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+++F M+ + SW +MI GY G EAL +F M ++ KPD VT + ++S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 456 SHSGFLSQGREFLPLMESRYGVV-PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
G L G+ ++ YG + +IDM + G ++EA ++ P E V
Sbjct: 368 GKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVV 425
Query: 515 VWRTLLAASRLHG 527
W T++A L+G
Sbjct: 426 TWTTMIAGYALNG 438
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 147/338 (43%), Gaps = 12/338 (3%)
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
L V WN + + ++L +FR M + G + FT V A + +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH ++K + S V V A +DM+ K V A ++FE M E+D +WN++++ Q G+
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
D LF M PD VT T++ + S +L +H + G+ D+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-------DV 186
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMDGQGKEALDMFS 434
V + N + Y KCG + A++VF + + D V SWN M Y + G+ +A ++
Sbjct: 187 -QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + KPD TF+ + ++C + L+QGR + G IE I M ++
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A L + V W +++ G+ D A
Sbjct: 305 EDTCSA-RLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 278/500 (55%), Gaps = 26/500 (5%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPL 197
LI C + ++K+IH + + GL D + S L+ F ++ A +VF+++P
Sbjct: 41 LIDQCSETK---QLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI-WMSRFTVTGVLSALIMMGFFKNGRV 256
++ WN ++ YA H++L +F RM + + +FT ++ A + G+
Sbjct: 98 PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
HG+V+K+ S V ++N+LI Y K +G +F +D+ SWNS++T Q G
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGC 217
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ L LF M + +P+ +T VL AC+ + GR +H YI N +
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIX-------- 269
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG------------MDG 424
+ + ++NA++DMYTKCGS+ DA+ +F KM +KD+ SW M++GY M G
Sbjct: 270 ESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHG 329
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
GK+A+ +FS M E K+KP+ VTF +L ACSH G + +GR F ME YGV+P ++HY
Sbjct: 330 HGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHY 389
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
C++D+LGRAG L EA EL MP VW LL A +H N LAE A ++ +LEP
Sbjct: 390 ACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEP 449
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
G+ G YVL+SNIY GK++ V +R MR ++K PGCS IE+ +H F+ D SHP
Sbjct: 450 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 509
Query: 605 EAKSIYAELHSLTARLREHG 624
AK IYA+L + ARL G
Sbjct: 510 SAKKIYAKLDEIVARLETIG 529
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 205/412 (49%), Gaps = 42/412 (10%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMK 84
NHP +L L + ++ ++IH+ MLRTG+ P S + LI S +
Sbjct: 35 NHP--------TLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLD 86
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKC 143
YA VF+ + PN++T+N +I + S+ + L F M Q PDK+TFP LIK
Sbjct: 87 YAQQVFDQIP-HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKA 145
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
++ + K HG+V K+ L DV+I ++L++ Y KC + +VF P RDVV W
Sbjct: 146 ASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSW 205
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M+ + Q G +ALE+F+ M + + + T+ GVLSA F+ GR VH + +
Sbjct: 206 NSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIER 265
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG---- 319
+ + NA++DMY K V +A +F+ M EKDI SW +++ + + G +D
Sbjct: 266 NRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGL 325
Query: 320 --------TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG-----YIVVNG 366
+ LF +M +P+ VTF+ +L ACSH+ + GR Y V+ G
Sbjct: 326 AMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPG 385
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
+ K+ +C ++D+ + G + +A + KM AS W ++
Sbjct: 386 V-KHYAC-----------MVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 425
>gi|297735121|emb|CBI17483.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 324/622 (52%), Gaps = 25/622 (4%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
S G + F P +T LQ+ ++N Q IH ++ +T + +S + L+ K
Sbjct: 15 SLGRRLFTAPAVASTECIDLQVL-ERSNDNLSQNIH-FISQTDLPESNKQLKELV----K 68
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFP 138
+ A +F+ +S + + ++ +ISG+ + + + + L F +MR + G+ D +
Sbjct: 69 TGHLGNARRMFDKMS-QKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 127
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
K C V + +HG K GL V++GSAL++ Y K + E +VF E+P+R
Sbjct: 128 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 187
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
+VV W A++ G + G +AL F M + + +T L A G GR +H
Sbjct: 188 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 247
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
+K G+D V N L MY K + L +FE M +D+ SW +I+T Q G +
Sbjct: 248 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 307
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
++ F RM + P+ TF+ V+ C++LA + G Q+H I+ GLA + S +
Sbjct: 308 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE---- 363
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
N++M MY KCG + + ++F +M+++D+ SW+ +I GY G EA ++ S M
Sbjct: 364 ----NSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRM 419
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES--------RYGVVPTIEHYTCVIDM 490
KP E VLSAC + L G++ + S +Y + P+ EHY C+ID+
Sbjct: 420 EGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMKYQISPSKEHYGCMIDL 479
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
L RAG+L++A + AMP + VVW TLL A R+HG+ + A+R+ QLEP G +
Sbjct: 480 LCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTH 539
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
+ ++NIY + GK+ E DIR M+ + V K PG SWI++KD + F++ DRSHP+ + IY
Sbjct: 540 ITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIY 599
Query: 611 AELHSLTARLREHGDCCAGTLF 632
L L +R E DC T F
Sbjct: 600 NMLDLLASRT-ELADCVQETGF 620
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 187/588 (31%), Positives = 339/588 (57%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + ++ + I + ML++G LS + L++ KC ++ YA +F+ + E +
Sbjct: 54 LRQCIDERSISGIKNIQAQMLKSGF-PVELSGSKLVDASLKCGEIGYARQLFDGMP-ERH 111
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ T+N++I+ + + + + ++ + M VLPD+YT + K D+ E ++ HG
Sbjct: 112 IVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 171
Query: 159 LVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L LGL++ +V++GSALV+ Y+K EA V + + +DVVL A++ GY+Q GE
Sbjct: 172 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 231
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A++ F+ M E + + +T VL + + NG+++HG++VK G++S + +L+
Sbjct: 232 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 291
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + V ++L +F+ ++ + +W S+++ Q G + L F +M+ +P+
Sbjct: 292 TMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSF 351
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+ L CS+LA GRQ+HG + G + D + + L+++Y KCG
Sbjct: 352 TLSSALRGCSNLAMFEEGRQVHGIVSKYGFDR--------DKYAGSGLIELYGKCGCSDM 403
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF +S+ DV S N MI Y +G G+EAL++F M L+P++VT + VL AC++
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
SG + +G E + ++ T +HY C++DMLGRAG+L EA L + N + V+WR
Sbjct: 464 SGLVEEGCELFDSFR-KDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTN-PDLVLWR 521
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H ++AE +++ ++ PG G +L+SN+Y + GK++ V++++ M++
Sbjct: 522 TLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMK 581
Query: 578 VRKNPGCSWIELKDGLHTFISSDR-SHPEAKSIYAELHSLTARLREHG 624
++KNP SW+E+ HTF++ D SHP ++ I L L + ++ G
Sbjct: 582 LKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLG 629
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 331/594 (55%), Gaps = 26/594 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQL +L+ Q+ HS +L + T LI+ Y+ + VF+++ + N
Sbjct: 33 LQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTK-N 91
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVLEVKKI 156
V+ +N++I+G+ N + F RQ+G +LPD YT + K ++ ++ K I
Sbjct: 92 VYLWNSLINGYVKNHQFDNAIVLF---RQMGRCLLPDDYTLATISKVSGEIQDLVLGKLI 148
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG ++G D+ +G+++++ Y++C+ +A+KVF+E+P R+V +N +++G A +G
Sbjct: 149 HGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNL 208
Query: 217 HKAL-----EVFRRMSKEGIWMSRFTVTGVLSALIMM-GFFKNGRVVHGIVVKMGYD--- 267
+L FRRM +G FTV +L G F +GR +H +VK G D
Sbjct: 209 DYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKM 268
Query: 268 -SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
S V + ++LIDMY + + + +F+ M+ ++I+ W +++ + Q G +G L LF
Sbjct: 269 CSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFRE 328
Query: 327 MLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M +P+ V+ +VLPAC L LM G+Q+H + + D + + NAL
Sbjct: 329 MQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFN--------DYISLRNAL 380
Query: 386 MDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
+DMY KCGS+ A+ VF S KD +W+ +I YG+ G+G+EAL + M + +KPD
Sbjct: 381 IDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPD 440
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+T VGVLSAC SG + +G + + Y + P++E CV+D+LGR+GQL++A +
Sbjct: 441 MITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFI 500
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYE 564
MP P VW +LL AS +HGN+ ++A + + +LEP + NY+ +SN Y + +++
Sbjct: 501 REMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWD 560
Query: 565 EVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
E+ ++R M+++ +RK PG SWI + D H F +D+ HP + SIY L L +
Sbjct: 561 EITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLDDLVS 614
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+ ++ L C L G+++H++ ++ D +LI+MY+KC + YA VF+N
Sbjct: 340 VSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDN 399
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
S + T++++IS + + + L + M Q G+ PD T ++ CC V E
Sbjct: 400 GSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDE 459
Query: 153 VKKIH-GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
I+ L + + V I +V+ + +++AL E+P+
Sbjct: 460 GISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPI 505
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/498 (36%), Positives = 274/498 (55%), Gaps = 44/498 (8%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G+LP P K C ++ ++IH +LGLD +V++ + ++ Y +C ++A
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++FEE+ RDVV WNAM++G+A G F +A++VFR L+ +
Sbjct: 67 YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRE-------------------LVAL 107
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL--EIFEMMEEKDIFSWNS 306
K D+G M +++ GK + AL +F+ M K + SWN+
Sbjct: 108 QCPKP-------------DAGT--MASILPSMGKARVEDIALLKGVFDEMRFKGLISWNA 152
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ V+ H + LF RM G +PD VT +TVLP+C ++AL G++IH I
Sbjct: 153 MLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVI---- 208
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ C + + NALMDMY CG +++A+ VF M +DV SW +I YG G G
Sbjct: 209 -KRRRMCSSM---LLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHG 264
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+EA+D+F MC L+PD + FV +L+ACSH+G L G+ + M S + + P +EHY C
Sbjct: 265 REAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYAC 324
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+LGRAG + EAY+ + MP + N VW LL A R+H N D+ +AA + +L P
Sbjct: 325 MVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAPKQ 384
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
G YVL+SNIY G++ +V +R M + ++K PG S EL D +HTF D SHP++
Sbjct: 385 TGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHPQS 444
Query: 607 KSIYAELHSLTARLREHG 624
K IY +L L R+RE G
Sbjct: 445 KMIYKKLSELLRRIREMG 462
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA L G++IHS R G+ + S I+MY++C + A +F + +V +
Sbjct: 22 CAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYR-DVVS 80
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
+NAMISGF + +D F + L PD T ++ M V+ I
Sbjct: 81 WNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPS----MGKARVEDI---- 132
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH-KA 219
AL+ VF+E+ + ++ WNAM+ Y E H +A
Sbjct: 133 -------------ALLKG------------VFDEMRFKGLISWNAMLAVYTN-NEMHVEA 166
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+E+F RM K+GI T+ VL + + G+ +H ++ + S + + NAL+DM
Sbjct: 167 VELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDM 226
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y C+ EA ++F+ M +D+ SW SI++ + + G+ + LF++M G +PD + F
Sbjct: 227 YANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAF 286
Query: 340 STVLPACSHLAALMHGRQ 357
+L ACSH L G+
Sbjct: 287 VAILAACSHAGLLDMGKH 304
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAM++ + +N+ + ++ F M++ G+ PD T ++ C +V A+ K+IH
Sbjct: 147 LISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHE 206
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
++ + + + + +AL++ Y C ++EA VF+ + RDVV W ++++ Y + G +
Sbjct: 207 VIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGRE 266
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYDSGVPVMNALI 277
A+++F +M +G+ +L+A G G+ + + + + ++
Sbjct: 267 AIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMV 326
Query: 278 DMYGKGKCVGEALEIFEMMEEK 299
D+ G+ C+ EA + +M K
Sbjct: 327 DLLGRAGCIREAYDFIMVMPIK 348
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLAT + S C + L G+ IH + R + S L +L++MY+ C +K A VF
Sbjct: 184 TLATVLPS---CGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVF 240
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+++ +V ++ ++IS + + + +D F M G+ PD F ++ C
Sbjct: 241 DSMGTR-DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAAC 293
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 185/554 (33%), Positives = 303/554 (54%), Gaps = 9/554 (1%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
++++ Y K ++ A VF+ + E + +N M+SG N + + F M + G+
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGM-LERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGI 203
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D T ++ ++ + I L K+G Y+ + L Y KC +E A
Sbjct: 204 GFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARL 263
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F ++ D+V +NAM++GY E ++ +F+ + G ++ ++ G++ G
Sbjct: 264 LFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGH 323
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
R +HG K G S V AL +Y + + A +F+ EK + SWN++++
Sbjct: 324 LHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q G + + LF M +P+ VT +++L AC+ L AL G+ +H I N
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+F++ AL+DMY KCGS+ +AQ +F+ M +K+ +WN MI GYG+ G G EAL
Sbjct: 444 --------IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEAL 495
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
++F+ M +++ P VTF+ VL ACSH+G + +G E M +G P EHY C++D+
Sbjct: 496 NLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDL 555
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGRAG L++A + MP E P VW LL A +H + +LA +A+ ++F+L+P + G Y
Sbjct: 556 LGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYY 615
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+SNIY AG Y E +R ++++ + K PGC+ IE+ + LH F S D+SHP+A +IY
Sbjct: 616 VLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHIFTSGDQSHPQATAIY 675
Query: 611 AELHSLTARLREHG 624
A L LT ++RE G
Sbjct: 676 AMLEKLTGKMREAG 689
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 239/490 (48%), Gaps = 15/490 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L + L + + H+ ++ G+ + +++T L + S + A +F+ + P+
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIP-NPD 72
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+F YN +I F N+ + + H+R+ L PD +T+ +I + L +
Sbjct: 73 LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHS 132
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ G D+++GSA+V Y K + A KVF+ + RD VLWN MV+G + F
Sbjct: 133 IVA---GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFD 189
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ +F M K GI TV VL + + G + + +K+G+ S V+ L
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+Y K + A +F + + D+ S+N++++ + + ++RLF +L +G + +
Sbjct: 250 CLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSS 309
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ ++P L R IHG+ + + ++ AL +Y++ +
Sbjct: 310 SIVGLIPVFFPFGHLHLTRCIHGFCT--------KSGVVSNSSVSTALTTVYSRLNEIES 361
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+++F + S+K +ASWN MI GY +G ++A+ +F M + +++P+ VT +LSAC+
Sbjct: 362 ARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQ 421
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
G LS G+ L+ +R I T +IDM + G + EA L MP E N V W
Sbjct: 422 LGALSLGKWVHDLI-NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP-EKNAVTWN 479
Query: 518 TLLAASRLHG 527
+++ LHG
Sbjct: 480 AMISGYGLHG 489
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 1/329 (0%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F T A L A +L G I ++ G IT L +YSKC +++ A +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + +P++ +YNAMISG+ N+ + F + G + + LI
Sbjct: 265 FGQIG-QPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGH 323
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + IHG K G+ + + +AL Y + +E A +F+E + + WNAM++G
Sbjct: 324 LHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ G KA+ +F+ M K + + TVT +LSA +G G+ VH ++ + ++S
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V ALIDMY K + EA +F MM EK+ +WN++++ + G L LF+ ML
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH 503
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+ P VTF +VL ACSH + G +I
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEI 532
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 3/176 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G+ +H + R + T+LI+MY+KC + A +F+ +
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N T+NAMISG+ + + + L+ FN M V P TF ++ C V E
Sbjct: 471 P-EKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREG 529
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMV 207
+I +V G + + +V+ + +++AL ++P+ +W A++
Sbjct: 530 DEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALL 585
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 322/633 (50%), Gaps = 57/633 (9%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYA 86
HPF+ A L +G+ L + P S++ + + + A
Sbjct: 18 THPFSAAL-------------LLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDA 64
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCC 145
VF+ + ISG G+ F M G P+ + +++CC
Sbjct: 65 RGVFDERPTR-TAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF------------- 192
+ V K++HG + + G+ LDV + +A+++ Y KC E A +VF
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNI 183
Query: 193 ------------------EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
+E PLRD WN +++G + G AL RRM++ G+ +
Sbjct: 184 AIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFN 243
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
+T + M+ GR +HG V+ + V ++L+DMY K + A +F+
Sbjct: 244 HYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFD 303
Query: 295 MME--EKDI-FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+D+ F+W++++ + Q G + L LF RML G D T ++V AC+++
Sbjct: 304 HWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGM 363
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+ GRQ+HG V L D + +A++DMY KCG++ DA+ +F + K++A
Sbjct: 364 VEQGRQVHG--CVEKLWYK------LDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIA 415
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
W M+ Y GQG+ A+++F M K+ P+E+T VGVLSACSH G +S+G + M
Sbjct: 416 VWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQM 475
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+ YG+VP+IEHY C++D+ GR+G L++A +VW+TLL+A RLH + +
Sbjct: 476 QEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEY 535
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
A++A++++ QLE G+YV++SNIY K+ + ++R +M+++ VRK PG SWI LK+
Sbjct: 536 AKLASEKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKN 595
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+HTF++ D SHP++ IYA L L RL+E G
Sbjct: 596 TVHTFVAGDASHPQSAEIYAYLEKLVERLKEIG 628
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 181/511 (35%), Positives = 294/511 (57%), Gaps = 31/511 (6%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+ ++ C + A E +++H + K V++ + L+ Y KC + +A VF+E+P
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVF---RRMSKEGIWM------------------SR 235
R+VV W AM++ Y+Q G +AL +F ++S G++ +
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
FT VL++ F GR +H +++K+ Y+ V V ++L+DMY K + EA +FE
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFEC 425
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ E+D+ S +I++ + Q G + L LF R+ G + + VT++ VL A S LAAL G
Sbjct: 426 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 485
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+Q+H +++ + + V + N+L+DMY+KCG++ ++ +F M ++ V SWN
Sbjct: 486 KQVHNHVLRSEIPSF--------VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 537
Query: 416 MILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES- 473
M++GY G+G+E L +F+ M E K+KPD VT + VLS CSH G +G M S
Sbjct: 538 MLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSG 597
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ V P +EHY CV+D+LGR+G++ EA+E MP E +W +LL A R+H N D+ E
Sbjct: 598 KIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGE 657
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A Q++ ++EPG+ GNYV++SN+Y + G++E+V +R M ++ V K PG S IEL L
Sbjct: 658 FAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVL 717
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
HTF +SDRSHP + I ++ L+ +E G
Sbjct: 718 HTFHASDRSHPRREEICMKVKELSTSFKEVG 748
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 178/334 (53%), Gaps = 23/334 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L C ++ ++GQ +H++M++T + S T LI +Y+KC + A VF+ + E
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP-E 306
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL---------------------PDKY 135
NV ++ AMIS + +A + L+ F ++ + P+++
Sbjct: 307 RNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEF 366
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
TF ++ C + + ++IH L+ KL + V++GS+L++ Y K + EA VFE L
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
P RDVV A+++GYAQ+G +ALE+FRR+ EG+ + T TGVL+AL + G+
Sbjct: 427 PERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK 486
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
VH V++ S V + N+LIDMY K + + IF+ M E+ + SWN+++ + + G
Sbjct: 487 QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHG 546
Query: 316 NHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSH 348
L+LF M +PD VT VL CSH
Sbjct: 547 EGREVLKLFTLMREETKVKPDSVTILAVLSGCSH 580
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 149/324 (45%), Gaps = 31/324 (9%)
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+M+ G M +L+ + F+ G+ VH ++K Y V + LI +Y K
Sbjct: 233 QMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 292
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--------------DRMLSA 330
+G+A +F+ M E+++ SW ++++ + Q G L LF D++ +
Sbjct: 293 SLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLS 352
Query: 331 G-------FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
+P+ TF+TVL +C+ + GRQIH I+ D VF+ +
Sbjct: 353 NPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYE--------DHVFVGS 404
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+L+DMY K G + +A+ VF + ++DV S +I GY G +EAL++F + +K
Sbjct: 405 SLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKS 464
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ VT+ GVL+A S L G++ + R + + +IDM + G L + +
Sbjct: 465 NYVTYTGVLTALSGLAALDLGKQVHNHV-LRSEIPSFVVLQNSLIDMYSKCGNLTYSRRI 523
Query: 504 ALAMPNEANPVVWRTLLAASRLHG 527
M E + W +L HG
Sbjct: 524 FDTM-YERTVISWNAMLVGYSKHG 546
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 192/543 (35%), Positives = 292/543 (53%), Gaps = 18/543 (3%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
M+ A VF+ + EPN +NAM G+ N+ + F M+ L V+P+ +TFP ++K
Sbjct: 1 MENAHKVFDQIP-EPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILK 59
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + A+ E +++H V K G + ++ + L++ Y + A +VF E+ R+V+
Sbjct: 60 SCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIA 119
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
W AM+NGY + A +F + I + ++G + A K+ +
Sbjct: 120 WTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEA-------KDVIRARELFD 172
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
KM + V N +++ Y V +FE M E+++FSWN+++ + + G L
Sbjct: 173 KMP-NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLS 231
Query: 323 LFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
F RML G P+ T VL AC+ L AL G+ +H Y +G N V++
Sbjct: 232 AFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGN--------VYV 283
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NALMDMY KCG + A VF M KD+ SWN +I G + G G +AL++FS M A
Sbjct: 284 RNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGE 343
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
PD +TF+G+L AC+H G + G + M Y +VP IEHY C++D+LGRAG L A
Sbjct: 344 NPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAV 403
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
+ MP EA+ V+W LL A R++ N +LAE+A +++ + EP + NYV++SNIY G
Sbjct: 404 DFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFG 463
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
++++V ++ MR +K PGCS IE+ D L F S D HPE + IY L +LT LR
Sbjct: 464 RWKDVARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGTLRTLTKLLR 523
Query: 622 EHG 624
G
Sbjct: 524 SSG 526
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 14/320 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L++G+E+H +++++G +P T+LI+MY+ + A VF + E N
Sbjct: 58 LKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEM-IERN 116
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK--YTFPCLIKCCCDVMAVLEVKKI 156
V + AMI+G+ + D R + P++ + +I + V+ +++
Sbjct: 117 VIAWTAMINGYIT------CCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRAREL 170
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
F + DV + ++N Y + ++FEE+P R+V WNA++ GY + G F
Sbjct: 171 ----FDKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCF 226
Query: 217 HKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ L F+RM +G + + T+ VLSA +G G+ VH GY V V NA
Sbjct: 227 SEVLSAFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNA 286
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K V AL++F+ M+ KD+ SWN+I+ G+ L LF M AG PD
Sbjct: 287 LMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPD 346
Query: 336 LVTFSTVLPACSHLAALMHG 355
+TF +L AC+H+ + G
Sbjct: 347 GITFIGILCACTHMGLVEDG 366
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L CA L G+ +H Y G + +L++MY+KC ++ AL VF +
Sbjct: 247 ATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKS 306
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ ++ ++N +I G + L+ F+HM+ G PD TF ++ C C M ++E
Sbjct: 307 MD-NKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGIL-CACTHMGLVE 364
Query: 153 VKKIHGLVFKLGLDLDVYIG------SALVNTYLKCQFMEEALKVFEELPLR-DVVLWNA 205
G + + D I +V+ + + A+ ++P+ D V+W A
Sbjct: 365 ----DGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAA 420
Query: 206 MV 207
++
Sbjct: 421 LL 422
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 309/592 (52%), Gaps = 16/592 (2%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYML--RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
IA L C++ L G++IHS +L R ++S ++ T L++MY KC + A VF +
Sbjct: 441 IAILNACSNSEALDFGRKIHSLILTRRRDYVESSVA-TMLVSMYGKCGSISEAELVFKEM 499
Query: 94 SCEP-NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ T+N M+ + ND + + M Q GVLPD +F ++ C E
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQE 556
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ + + + G + +AL++ + +C+ +E+A VF E+ DVV W AMV+ A+
Sbjct: 557 AQVLRMCILESGYR-SACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAE 615
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+F + +FRRM EG+ +FT+ L + G+V+H V ++G ++ + V
Sbjct: 616 NRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAV 675
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL++MY EAL FE M+ +D+ SWN + + Q G + LF +M G
Sbjct: 676 ENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGV 735
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD +TFST L A + G+ H +GL DV + L+ +Y KC
Sbjct: 736 KPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDS--------DVSVATGLVKLYAKC 787
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + +A +F V N +I G +EA+ MF M + ++PD T V ++
Sbjct: 788 GKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSII 847
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC H+G + +G M+ +G+ PT+EHY C +D+LGRAGQL A ++ MP E N
Sbjct: 848 SACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDN 907
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+VW +LL +L G+ +L E AQR+ +L+P + +V++SNIY A GK+++ R
Sbjct: 908 TLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKK 967
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M +NV+ PG SW E+ +H F++ DRSHP+ IY L L +R G
Sbjct: 968 MLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAG 1019
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 257/516 (49%), Gaps = 37/516 (7%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT----SLINMYSKCCQMKYALFV 89
T +A L CA+ +L G+ IH+ + G+ + + T ++INMY+KC ++ A+ V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAF--KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
F + E +V ++ AM +G Y+ + F L F M + P+ TF + C
Sbjct: 189 FLAIP-EKDVVSWTAM-AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC--- 243
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR---DVVLWN 204
++ + +H L+ + L D +AL+N Y KC E A VF+ + R D+V WN
Sbjct: 244 TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWN 303
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF-FKNGRVVHGIVVK 263
AM++ + G A+ +FRR+ EG+ + T+ +L+AL G F R HG + +
Sbjct: 304 AMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWE 363
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLR 322
GY V + NA+I MY K A +F + K D+ SWN+++ E + +
Sbjct: 364 SGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVN 423
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
F ML AG P+ V+F +L ACS+ AL GR+IH I+ +D + +
Sbjct: 424 TFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR-------RDYVESSVA 476
Query: 383 NALMDMYTKCGSMRDAQMVFTKM--SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
L+ MY KCGS+ +A++VF +M + + +WN+M+ Y + + KEA M +
Sbjct: 477 TMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGG 536
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPL--MESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ PD ++F VLS+C + SQ + L + +ES Y +E T +I M GR +L
Sbjct: 537 VLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYR-SACLE--TALISMHGRCRELE 589
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+A + M + + V W +++A+ N D E+
Sbjct: 590 QARSVFNEM-DHGDVVSWTAMVSAT--AENRDFKEV 622
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 257/525 (48%), Gaps = 46/525 (8%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
SG + L A LQ C +L KG+ H + G+ LINMY +C
Sbjct: 14 SGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRC 73
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMIS-----GFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
++ A +F+ + E NV ++ A+IS G ++ FA F + + P+ Y
Sbjct: 74 GSLEEAHAIFSKME-ERNVVSWTALISANAQCGAFARAFAL----FRTMLLESSAAPNSY 128
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD----LDVYIGSALVNTYLKCQFMEEALKV 191
T ++ C + + + IH ++++LGL+ +G+A++N Y KC +E+A+ V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
F +P +DVV W AM YAQ F+ AL +FR M + + + T L A +
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL-- 246
Query: 251 FKNGRVVHGIV--VKMGYDSGVPVM-NALIDMYGKGKCVGEALEIFEMM---EEKDIFSW 304
++G +H ++ +G+D P+ NALI+MYGK A +F+ M +E D+ SW
Sbjct: 247 -RDGTWLHSLLHEASLGFD---PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSW 302
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA----LMHGRQIHG 360
N++++ + G H + +F R+ G +P+ VT T+L A LAA R HG
Sbjct: 303 NAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNA---LAASGVDFGAARGFHG 359
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILG 419
I +G + DV + NA++ MY KCG A VF ++ K DV SWN M LG
Sbjct: 360 RIWESGYLR--------DVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTM-LG 410
Query: 420 YGMDGQG-KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
D + + ++ F M A + P++V+F+ +L+ACS+S L GR+ L+ +R
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470
Query: 479 PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAA 522
T ++ M G+ G ++EA + MP + +V W +L A
Sbjct: 471 VESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA 515
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 224/466 (48%), Gaps = 16/466 (3%)
Query: 41 LCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVF 100
L A + + H + +G + + ++I+MY+KC A VF + + +V
Sbjct: 344 LAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVI 403
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++N M+ K ++ F+HM G+ P+K +F ++ C + A+ +KIH L+
Sbjct: 404 SWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLI 463
Query: 161 FKLGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFH 217
D ++ + + LV+ Y KC + EA VF+E+PL R +V WN M+ YAQ
Sbjct: 464 LTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSK 523
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A M + G+ + T VLS+ + +V+ +++ GY S + ALI
Sbjct: 524 EAFGALMEMLQGGVLPDALSFTSVLSSCYCS---QEAQVLRMCILESGYRSAC-LETALI 579
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
M+G+ + + +A +F M+ D+ SW ++++ + + LF RM G PD
Sbjct: 580 SMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKF 639
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T +T L C L G+ IH + GL D+ + NAL++MY+ CG R+
Sbjct: 640 TLATTLDTCLASTTLGLGKVIHACVTEIGLEA--------DIAVENALLNMYSNCGDWRE 691
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A F M +D+ SWNIM Y G KEA+ +F M +KPD++TF L+
Sbjct: 692 ALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGG 751
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
S +S G+ F L + G+ + T ++ + + G+L+EA L
Sbjct: 752 SALVSDGKLFHAL-AAESGLDSDVSVATGLVKLYAKCGKLDEAMSL 796
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 200/403 (49%), Gaps = 24/403 (5%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
D + L++ C D + + K H L+ GL+ +++G+ L+N Y++C +EEA +
Sbjct: 23 ADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGF 250
F ++ R+VV W A+++ AQ G F +A +FR M E + +T+ +L+A
Sbjct: 83 FSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142
Query: 251 FKNGRVVHGIVVKMGYD----SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
GR +H ++ ++G + + V NA+I+MY K + +A+ +F + EKD+ SW +
Sbjct: 143 LAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTA 202
Query: 307 IMTVHEQCGN-HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
+ + Q + LR+F ML P+++TF T L AC+ +L G +H +
Sbjct: 203 MAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEA 259
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK---DVASWNIMILGYGM 422
L D +NAL++MY KCG A VF M+ + D+ SWN MI
Sbjct: 260 SLGF--------DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE 311
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF-LSQGREFL-PLMESRYGVVPT 480
G+ +A+ +F + ++P+ VT + +L+A + SG R F + ES Y +
Sbjct: 312 AGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGY--LRD 369
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
+ +I M + G + A+ + + + + + W T+L AS
Sbjct: 370 VVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGAS 412
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 10/303 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLAT +L C T L G+ IH+ + G+ +L+NMYS C + AL
Sbjct: 639 FTLAT---TLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSF 695
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + ++ ++N M + + A + + F M+ GV PDK TF +
Sbjct: 696 FETMKAR-DLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSAL 754
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V + K H L + GLD DV + + LV Y KC ++EA+ +F VVL NA++
Sbjct: 755 VSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGA 814
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AQ G +A+++F +M +EG+ T+ ++SA G + G + Y
Sbjct: 815 LAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG--CSSFLTMKEYFGI 872
Query: 270 VPVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
P + +D+ G+ + A +I M E + W S++ + G+ + R
Sbjct: 873 SPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQ 932
Query: 326 RML 328
R+L
Sbjct: 933 RIL 935
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 197/586 (33%), Positives = 313/586 (53%), Gaps = 53/586 (9%)
Query: 44 HQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
H +N K ++IH + R + S +T I+ S + YA+ +F + N + +
Sbjct: 50 HASNSTHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELK-NSYLF 108
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
NA+I G N + FF M + + PD+ TFP ++K + + +H + K
Sbjct: 109 NALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILK 168
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR----DVVLWNAMVNGYAQIGEFHK 218
GL+ D ++ +LV+ Y+K + + ALKVF+E P V++WN +++GY ++G+ K
Sbjct: 169 FGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVK 228
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A E+F M K+ TG ++LI GF K G D
Sbjct: 229 ATELFDSMPKKD--------TGSWNSLIN-GFMKMG-----------------------D 256
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
M G A E+F M EK++ SW +++ Q G+ + L F ML G +P+ T
Sbjct: 257 M-------GRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYT 309
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L AC+ + AL G +IH Y+ NG N + + AL+DMY KCG++ A
Sbjct: 310 IVSALSACAKIGALDAGLRIHNYLSGNGFKLN--------LVIGTALVDMYAKCGNIEHA 361
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ VF + +K + W++MI G+ + G ++AL F M KPD V F+ VL+ACSHS
Sbjct: 362 EKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHS 421
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G +++G +F M Y + P+++HYT V+DMLGRAG+L+EA + AMP + VVW
Sbjct: 422 GQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGA 481
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
L A R H N ++AE+A++++ QLEP H G+YV +SN Y + G++++ +R +MR
Sbjct: 482 LFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGA 541
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K+PG S+IE+ LH F++ D +H A IY++L ++A RE G
Sbjct: 542 HKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKG 587
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/568 (34%), Positives = 314/568 (55%), Gaps = 25/568 (4%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PF + C L + + G+ +H L + + SL+ MY C +++
Sbjct: 123 YTYPFVIKACSELLLV-------EYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEE 175
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ + E +V ++N MI+G++ N FA L FN M GV D + ++ C
Sbjct: 176 ARKVFDAMK-EKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPAC- 233
Query: 146 DVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ LEV +++HGLV + L + + +ALV+ Y KC M+EA VF+ + RDVV W
Sbjct: 234 GYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWT 292
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+M+NGY G+ AL +F+ M EG+ + T+ +L A + K+GR +HG V+K
Sbjct: 293 SMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQ 352
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLR 322
S V V +LIDMY K C+G + +F K WN++++ VH + +
Sbjct: 353 RLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATE--AIG 410
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF +ML G + + T +++LPA LA L I+ Y++ +G N + +
Sbjct: 411 LFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSN--------IQVA 462
Query: 383 NALMDMYTKCGSMRDAQMVFTKM--SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+L+D+Y+KCGS+ A +F + +D+ W+I+I GYGM G G+ A+ +F M ++
Sbjct: 463 TSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSG 522
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+KP++VTF VL +CSH+G + G M + +P +HYTC++D+LGRAG+++EA
Sbjct: 523 VKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEA 582
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
Y+L MP VW LL A +H N +L E+AA+ +F+LEPG+ GNYVL++ +Y A
Sbjct: 583 YDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAAL 642
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
G++E+ ++R M +RK P S IE
Sbjct: 643 GRWEDAENVRQRMDDIGLRKAPAHSLIE 670
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 248/492 (50%), Gaps = 22/492 (4%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +++H++++ +G++ + + L+ Y+ C + A +F+ L + YN MI
Sbjct: 36 SLTSTKQLHAHLITSGLLSIDIR-SVLVATYAHCGYVHNARKLFDELR-QRGTLLYNFMI 93
Query: 107 SGFYSNDFAFKGLDFFNHMRQLG---VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
+ + F+ + F + LG PD YT+P +IK C +++ V + +HGL
Sbjct: 94 KMYIAKGDYFEAMKVF--LEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVS 151
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
+++ ++L+ Y+ C +EEA KVF+ + + VV WN M+NGY + G + AL VF
Sbjct: 152 KFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVF 211
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+M G+ + +V VL A + + GR VHG+V + + V NAL+DMY K
Sbjct: 212 NQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAKC 270
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ EA +F+ M E+D+ SW S++ + G+ L LF M G +P+ VT + +L
Sbjct: 271 GSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALIL 330
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ L L GR +HG+++ L +V + +L+DMY KC + + VFT
Sbjct: 331 LACASLNNLKDGRCLHGWVMKQRL--------YSEVAVETSLIDMYAKCNCLGLSFSVFT 382
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS- 462
+ S+K WN ++ G + EA+ +F M ++ + T +L A G L+
Sbjct: 383 RTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA---YGILAD 439
Query: 463 -QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLL 520
Q + R G V I+ T +ID+ + G L A+++ +P + + VW ++
Sbjct: 440 LQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIII 499
Query: 521 AASRLHGNTDLA 532
A +HG+ + A
Sbjct: 500 AGYGMHGHGETA 511
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
P + ++L +L +Q+H +++ +GL ID + + L+ Y
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLL------SID---IRSVLVATYAH 67
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVG 450
CG + +A+ +F ++ ++ +N MI Y G EA+ +F M +K PD T+
Sbjct: 68 CGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPF 127
Query: 451 VLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
V+ ACS + GR L + S++G + ++ M G++ EA ++ AM
Sbjct: 128 VIKACSELLLVEYGRVLHGLTLVSKFG--SHLFVLNSLLAMYMNCGEVEEARKVFDAM-K 184
Query: 510 EANPVVWRTLL 520
E + V W T++
Sbjct: 185 EKSVVSWNTMI 195
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 324/589 (55%), Gaps = 16/589 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L T+ + Q+IH+ M II++ L++ + A +F+ + PN
Sbjct: 35 LSLLKQCTSTKSLQQIHTQM----IINAIHKPNFLLHRFIDLKDFNNASLLFSQIPY-PN 89
Query: 99 VFTYNAMISGFYSNDFAFK-GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +N MI G + F ++F+ M+ G+ P+ +T+P + C +++ + + H
Sbjct: 90 EYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K GL D ++ +L+ Y +C + A +VF+E+ +D+V WN+M++GY+++G
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAG 209
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
A+ +F M G T+ +L A +G G + G VV+ D V +ALI
Sbjct: 210 DAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALI 269
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MYGK + A +F+ M +KD+ +WN+++T + Q G D + LF M +G PD +
Sbjct: 270 GMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKI 329
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T VL AC+ + AL G+ + Y GL +D++++ AL+DMY KCGS+ D
Sbjct: 330 TLVGVLSACASIGALDFGKWLDTYASERGLQ--------NDIYVSTALIDMYAKCGSLDD 381
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSAC 455
A VF M +K+ SWN MI G+ +E+L +F M + ++P++++F+GVLSAC
Sbjct: 382 ALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSAC 441
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
H+G + +GR+ LM S +G+VP IEH++C++D+L RAG ++EA++ MP + + VV
Sbjct: 442 VHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVV 501
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
LL A + N D++E + ++EP + GNY++ S I+ ++++ +R MRQ
Sbjct: 502 LGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQ 561
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ V K PGCSWIE+++ +H F + D H ++ + ++ L ++ G
Sbjct: 562 RGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVEG 610
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 144/269 (53%), Gaps = 4/269 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C +L G I +++ + + ++LI MY KC + A VF+ +
Sbjct: 229 TLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRM 288
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V T+NAMI+G+ N + + + F+ MR+ GV PDK T ++ C + A+
Sbjct: 289 -VKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFG 347
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K + + GL D+Y+ +AL++ Y KC +++AL+VFE++P ++ V WNAM++ A
Sbjct: 348 KWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFH 407
Query: 214 GEFHKALEVFRRMSKEG--IWMSRFTVTGVLSALIMMGFFKNGRVVHGIV-VKMGYDSGV 270
G ++L +F+RMSKEG + + + GVLSA + G GR + ++ G +
Sbjct: 408 GRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKI 467
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+ ++D+ + V EA + E M EK
Sbjct: 468 EHHSCMVDLLARAGHVHEAWDFIEKMPEK 496
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CA L G+ + +Y G+ + T+LI+MY+KC + AL VF ++
Sbjct: 330 TLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDM 389
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMAVL 151
+ N ++NAMIS + + L F M + G V P+ +F ++ C V
Sbjct: 390 P-QKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVD 448
Query: 152 EVKKIHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
E +++ L+ GL + S +V+ + + EA E++P + D V+ A++
Sbjct: 449 EGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALL 506
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 285/484 (58%), Gaps = 9/484 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L++ C + + + H + ++GL++D+ + L+N Y KC ++ A K F E+P++
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN ++ Q E +AL++ +M +EG + FT++ VL +H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+K DS V AL+ +Y K + +A ++FE M EK+ +W+S+M + Q G H+
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L +F GF D S+ + AC+ LA L+ G+Q+H +G N +
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSN--------I 280
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTK-MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+++++L+DMY KCG +R+A +VF + + + WN MI G+ + EA+ +F M +
Sbjct: 281 YVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQ 340
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
PD+VT+V VL+ACSH G +G+++ LM ++ + P++ HY+C+ID+LGRAG ++
Sbjct: 341 RGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVH 400
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+AY+L MP A +W +LLA+ +++GN + AEIAA+ +F++EP + GN++L++NIY
Sbjct: 401 KAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYA 460
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
A K++EV R +R+ +VRK G SWIE+K+ +H+F +R+HP+ IYA+L +L
Sbjct: 461 ANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVV 520
Query: 619 RLRE 622
L++
Sbjct: 521 ELKK 524
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 171/320 (53%), Gaps = 2/320 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA + G+ H+ ++R G+ L+ LINMYSKC + A FN + + +
Sbjct: 50 LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK-S 108
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +I N + L M++ G +++T ++ C A+LE ++H
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K +D + ++G+AL++ Y KC +++A ++FE +P ++ V W++M+ GY Q G +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +FR G F ++ +SA + G+ VH I K G+ S + V ++LID
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288
Query: 279 MYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K C+ EA +F+ ++E + I WN++++ + + LF++M GF PD V
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348
Query: 338 TFSTVLPACSHLAALMHGRQ 357
T+ VL ACSH+ G++
Sbjct: 349 TYVCVLNACSHMGLHEEGQK 368
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 152/291 (52%), Gaps = 4/291 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF T + L CA + + + ++H++ ++ I + T+L+++Y+KC +K A
Sbjct: 141 PFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQ 200
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F ++ E N T+++M++G+ N F + L F + + +G D + + C +
Sbjct: 201 MFESMP-EKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLA 259
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE-ELPLRDVVLWNAMV 207
++E K++H + K G ++Y+ S+L++ Y KC + EA VF+ L +R +VLWNAM+
Sbjct: 260 TLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMI 319
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GY 266
+G+A+ +A+ +F +M + G + T VL+A MG + G+ ++V+
Sbjct: 320 SGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNL 379
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGN 316
V + +ID+ G+ V +A ++ E M S W S++ + GN
Sbjct: 380 SPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGN 430
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 341 bits (874), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 298/529 (56%), Gaps = 30/529 (5%)
Query: 118 GLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
L+ + +MR+L + D + P ++K C + K+IHG K GL DV++ +AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWN----------------------AMVNGYAQIGE 215
Y +C + A +F+++ RDVV W+ AM+ GY + +
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +F RM +E ++ + T+ ++ + +G + G+ +H +++ G+ + + A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMYGK + A IF+ M+ KD+ +W ++++ + Q D +LF +M G +P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+T ++L C+ AL G+ H YI G+ DV + AL+DMY KCG +
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEV--------DVILKTALIDMYAKCGDI 384
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
AQ +F++ +D+ +WN+M+ GYGM G G++AL +F+ M +KP+++TF+G L AC
Sbjct: 385 SGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHAC 444
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SH+G + +G+ M +G+VP +EHY C++D+LGRAG L+EAY++ +MP N +
Sbjct: 445 SHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAI 504
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W +LAA ++H N+++ E+AA+ + LEP +CG VLMSNIY A ++ +V +R ++
Sbjct: 505 WGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKD 564
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K PG S IE+ +H F D +HP + I L ++ +L+E G
Sbjct: 565 TGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAG 613
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 192/406 (47%), Gaps = 39/406 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ C+ + + G+EIH + ++ G++ + +L+ MYS+C + A +F+ +S
Sbjct: 116 LKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDV 175
Query: 95 -----------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
+ ++ ++ AMI+G+ + +G F M + V P+ T
Sbjct: 176 VSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITM 235
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
LI C V AV K++H + + G + + + +ALV+ Y KC + A +F+ +
Sbjct: 236 LSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKN 295
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
+DV+ W AM++ YAQ A ++F +M G+ + T+ +LS + G G+
Sbjct: 296 KDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWF 355
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H + K G + V + ALIDMY K + A +F ++DI +WN +M + G
Sbjct: 356 HAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYG 415
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG-----RQIHGYIVVNGLAKNGS 372
+ L+LF M + G +P+ +TF L ACSH ++ G + IH + +V + G
Sbjct: 416 EKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYG- 474
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDA-QMVFTKMSKKDVASWNIMI 417
++D+ + G + +A +M+ + ++A W M+
Sbjct: 475 -----------CMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAML 509
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 148/293 (50%), Gaps = 18/293 (6%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F + T+ + I S C +Q G+ +H+Y+LR G S T+L++MY KC +++
Sbjct: 228 VFPNDITMLSLIIS---CGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIR 284
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
A +F+++ +V T+ AMIS + D+AF+ F MR GV P++ T L+
Sbjct: 285 SARAIFDSMK-NKDVMTWTAMISAYAQANCIDYAFQ---LFVQMRDNGVRPNELTMVSLL 340
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
C A+ K H + K G+++DV + +AL++ Y KC + A ++F E RD+
Sbjct: 341 SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC 400
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN M+ GY G KAL++F M G+ + T G L A G G+ G+
Sbjct: 401 TWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGK---GLF 457
Query: 262 VKMGYDSG-VPVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMT 309
KM +D G VP + ++D+ G+ + EA ++ E M +I W +++
Sbjct: 458 EKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 328/589 (55%), Gaps = 21/589 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ L++G+ +H+ + G+ + SL++MY++C M A VF+ ++ E + +
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFD-VTEERDDVS 182
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC----DVMAVLEVKKIH 157
+N+++SG+ + L F MR+ + + + +IKCC V + E +H
Sbjct: 183 WNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEA--VH 240
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI-GEF 216
G V K GLD D+++ SA+V+ Y K + EA+ +F+ + +VV++NAM+ G +
Sbjct: 241 GCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAV 300
Query: 217 HK-----ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
HK AL ++ + G+ + FT + V+ A + G + G+ +HG V+K +
Sbjct: 301 HKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDF 360
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +ALID+Y C+ + F + ++D+ +W ++++ Q + L LF +L G
Sbjct: 361 IGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVG 420
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD T S+V+ AC+ LA + G Q+ + +G + + M N+ + MY +
Sbjct: 421 LKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTA--------MGNSCIHMYAR 472
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
G++ A F +M DV SW+ +I + G ++AL F+ M AK+ P+E+TF+GV
Sbjct: 473 SGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGV 532
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+ACSH G + +G + +M+ YG+ PT++H TCV+D+LGRAG+L +A
Sbjct: 533 LTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHD 592
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
PVVW++LL + R+H + + ++ A R+ +L+P G YV + N+Y+ G+ IR
Sbjct: 593 EPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRD 652
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
M+++ V+K PG SWIEL+ G+H+F++ D+SHPE +IY +L + +++
Sbjct: 653 LMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKI 701
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 165/327 (50%), Gaps = 19/327 (5%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTY--LKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +HG + + +++ + L+ Y L +A ++ +E+P R+ V +N +++
Sbjct: 28 QAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDA 87
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y++ G+ ++LE F + + RFT L+A G K G+VVH + V G
Sbjct: 88 YSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAE 147
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
GV V N+L+ MY + +GEA +F++ EE+D SWNS+++ + + G H+ LR+F M
Sbjct: 148 GVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMR 207
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG--RQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+ +V+ CS + G +HG +V GL D+F+ +A++
Sbjct: 208 RCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDT--------DLFLASAMV 259
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG------KEALDMFSCMCEAK 440
DMY K G++ +A +F + +V +N MI G D +EAL ++S +
Sbjct: 260 DMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRG 319
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREF 467
++P E TF V+ AC+ +G + G++
Sbjct: 320 MEPTEFTFSSVIRACNLAGDIEFGKQI 346
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 183/575 (31%), Positives = 322/575 (56%), Gaps = 12/575 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
+++HS++++ G DS L ++ SL++ Y K + A +FN++ E + T+NA+++G+
Sbjct: 218 RQVHSHVIKLGY-DSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP-ERDSVTFNALLTGYS 275
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
F + ++ F M+++G P ++TF ++ + + +++HG V K +V+
Sbjct: 276 KEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVF 335
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +AL++ Y K + EA K+F E+P D + +N +V YA G ++LE+F+ + G
Sbjct: 336 VANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTG 395
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
F +LS + GR +H + S + V N+L+DMY K GEA
Sbjct: 396 FDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEAN 455
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
IF + + W ++++ + Q G H+ L+LF M A D T+++++ AC+ LA
Sbjct: 456 RIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLA 515
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L G+Q+H +I+ +G I +VF +AL+DMY KCGS++DA +F +M ++
Sbjct: 516 SLTLGKQLHSHIIGSGY--------ISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I Y +G G L +F M + L+PD V+ + +L ACSH G + +G ++
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDS 627
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M Y +VP EHY IDML R G+ +EA +L MP E + ++W ++L + +H N +
Sbjct: 628 MTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQE 687
Query: 531 LAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LA+ AA ++F ++ YV MSNIY A G+++ V ++ MR++ V+K P SW+E+
Sbjct: 688 LAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEI 747
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K H F ++D++HP+ + I +L L ++ + G
Sbjct: 748 KHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKG 782
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 232/463 (50%), Gaps = 11/463 (2%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S ++I Y K + A +F+++ + T+ +I G+ N+ + F M +
Sbjct: 133 FSTNTMIMGYIKSGNLSEARTLFDSM-FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGR 191
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G+ PD + L+ + +V EV+++H V KLG D + + ++L+++Y K + +
Sbjct: 192 HGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGL 251
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F ++P RD V +NA++ GY++ G +A+ +F +M + G + FT +L+A I
Sbjct: 252 AFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQ 311
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + G+ VHG VVK + V V NAL+D Y K V EA ++F M E D S+N +
Sbjct: 312 LDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVL 371
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+T + G +L LF + GF F+T+L + L GRQIH +V
Sbjct: 372 VTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDA 431
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
I ++ + N+L+DMY KCG +A +F+ ++ + W MI Y G +
Sbjct: 432 --------ISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHE 483
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+ L +F M AK+ D T+ ++ AC+ L+ G++ + G + + + +
Sbjct: 484 DGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGS-GYISNVFSGSAL 542
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+DM + G + +A ++ MP N V W L++A +G+ D
Sbjct: 543 VDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGD 584
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 184/358 (51%), Gaps = 16/358 (4%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+++ + ++ Y+K + EA +F+ + R V W ++ GYAQ +F +A +F M
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ GI ++ +LS R VH V+K+GYDS + V N+L+D Y K + +G
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F + E+D ++N+++T + + G + + LF +M G++P TF+ +L A
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L + G+Q+HG++V C + +VF+ NAL+D Y+K + +A +F +M +
Sbjct: 311 QLDDIEFGQQVHGFVV--------KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPE 362
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
D S+N+++ Y +G+ KE+L++F + F +LS + S L GR+
Sbjct: 363 VDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQ- 421
Query: 468 LPLMESRYGVVPTIEHY---TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ S+ V I ++DM + G+ EA + + +++ V W ++++
Sbjct: 422 ---IHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSS-VPWTAMISS 475
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 170/329 (51%), Gaps = 6/329 (1%)
Query: 30 FTLATCI-ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
FT A + A +QL +++ GQ++H ++++ + + +L++ YSK ++ A
Sbjct: 300 FTFAAILTAGIQL----DDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASK 355
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F + E + +YN +++ + N + L+ F ++ G + F L+ +
Sbjct: 356 LFYEMP-EVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 414
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ ++IH ++ +G++LV+ Y KC EA ++F +L ++ V W AM++
Sbjct: 415 NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMIS 474
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y Q G L++F M + I T ++ A + G+ +H ++ GY S
Sbjct: 475 SYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYIS 534
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V +AL+DMY K + +AL++F+ M ++ SWN++++ + Q G+ D TLRLF+ M+
Sbjct: 535 NVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMV 594
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+G QPD V+ ++L ACSH + G Q
Sbjct: 595 RSGLQPDSVSLLSILCACSHCGLVEEGLQ 623
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 21 SGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
+G N PF IA++ L NL G++IHS + T I L SL++MY+KC
Sbjct: 394 TGFDRRNFPFATLLSIAAISL-----NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKC 448
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
+ A +F++L+ + +V + AMIS + GL F M++ + D T+ +
Sbjct: 449 GEFGEANRIFSDLAIQSSV-PWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
++ C + ++ K++H + G +V+ GSALV+ Y KC +++AL++F+E+P+R+
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG------ 254
V WNA+++ YAQ G+ L +F M + G+ ++ +L A G + G
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDS 627
Query: 255 --RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVH 311
R+ + K Y S IDM +G EA ++ M E D W+S++
Sbjct: 628 MTRIYKLVPKKEHYAS-------TIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLN-- 678
Query: 312 EQCGNH 317
CG H
Sbjct: 679 -SCGIH 683
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + ++ CA +L G+++HS+++ +G I + S ++L++MY+KC +K AL +F
Sbjct: 502 ATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQE 561
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ N ++NA+IS + N L F M + G+ PD + ++ C C ++E
Sbjct: 562 MPVR-NSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSIL-CACSHCGLVE 619
Query: 153 VKKIHGL--------VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
GL ++KL + Y ++ ++ + +EA K+ ++P D ++W
Sbjct: 620 ----EGLQYFDSMTRIYKLVPKKEHY--ASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMW 673
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKE 229
++++N HK E+ ++ + +
Sbjct: 674 SSVLNSCG----IHKNQELAKKAANQ 695
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/582 (31%), Positives = 314/582 (53%), Gaps = 20/582 (3%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+++++TG + ++ L+N+Y+KC M A VF+NL NV + +++G+ N
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLP-RRNVVVWTTLMTGYVQNS 60
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
++ F M + G P +T + C + ++ K+ H + K + D IG+
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
AL + Y K ++ ++K F E +DV+ W +++ G L +F M E +
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ FT+T VLS + G VH + K+G++S + + N+L+ +Y K C+ EA +F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 294 EMMEEKDIFSWNSIMTVHEQC---------GNHDGT--LRLFDRMLSAGFQPDLVTFSTV 342
ME K++ +WN+++ H Q GT L ++ ++ +G +PDL T S++
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L CS LAAL G QIH + +G + DV + AL+DMY KCGS+ A+ F
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGF--------LSDVVVGTALVDMYDKCGSIERARKAF 352
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
MS + + SW MI + GQ + AL +F M A +P+++TFVGVL+ACSH+G +
Sbjct: 353 LDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVD 412
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ E+ +M+ Y + P ++HY C++DM R G+L+EA+++ M E N +W L+A
Sbjct: 413 EALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
R HGN +L AA+++ +L+P YV++ N+Y++ ++E+V +R M+++ V K
Sbjct: 473 CRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLK 532
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S I +K +H+F +++R H ++ L+ L R + G
Sbjct: 533 DWSRISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLG 574
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 215/442 (48%), Gaps = 26/442 (5%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
+F FTL+ +L C+ ++ G++ H+++++ I +L ++YSK +
Sbjct: 77 SFPSNFTLSI---ALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLD 133
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
++ F + E +V ++ +IS N A GL F M V P+ +T ++ C
Sbjct: 134 SSVKAFRE-TGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLC 192
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ + ++H L KLG + ++ I ++LV YLKC ++EA +F + ++++ WN
Sbjct: 193 STIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWN 252
Query: 205 AMVNGYAQIGEFHK-----------ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
AM+ G+AQ + K AL ++ ++++ G FT++ +L+ + +
Sbjct: 253 AMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQ 312
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +H +K G+ S V V AL+DMY K + A + F M + + SW S++T +
Sbjct: 313 GEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFAR 372
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G L+LF+ M AGF+P+ +TF VL ACSH + + Y + + K
Sbjct: 373 HGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE---YFEI--MQKEYKI 427
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDM 432
K + D + L+DM+ + G + +A V +M + + W ++I G G E L
Sbjct: 428 KPVMDHY--GCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIA--GCRNHGNEELGF 483
Query: 433 FSCMCEAKLKPDEV-TFVGVLS 453
++ KLKP T+V +L+
Sbjct: 484 YAAEQLLKLKPRSTETYVVLLN 505
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 10/267 (3%)
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
+VH V+K G VM+ L+++Y K + A ++F+ + +++ W ++MT + Q
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ + +F ML +G P T S L ACS L ++ G+Q H +I+ ++ + S
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSS--- 117
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ NAL +Y+K GS+ + F + +KDV SW +I G +G+ L +F
Sbjct: 118 -----IGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIE 172
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M ++P++ T VLS CS G + L ++ G + ++ + + G
Sbjct: 173 MLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSL-STKLGHESNLRITNSLVYLYLKCG 231
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAA 522
++EA L M + N + W ++A
Sbjct: 232 CIDEAKNLFNRMEYK-NLITWNAMIAG 257
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 288/486 (59%), Gaps = 17/486 (3%)
Query: 147 VMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQF---MEEALKVFE--ELPLRDV 200
V ++ ++++IH + G+ + D +G L+ + M A KVF E P+ +V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NV 85
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+WN ++ GYA+IG A ++R M G + T ++ A+ M + G +H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+V++ G+ S + V N+L+ +Y V A ++F+ M EKD+ +WNS++ + G +
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ M S G +PD T ++L AC+ + AL G+++H Y++ GL +N +
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN--------L 257
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+N L+D+Y +CG + +A+ +F +M K+ SW +I+G ++G GKEA+++F M
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 440 K-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ L P E+TFVG+L ACSH G + +G E+ M Y + P IEH+ C++D+L RAGQ+
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+AYE +MP + N V+WRTLL A +HG++DLAE A ++ QLEP H G+YVL+SN+Y
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
+ ++ +V IR M + V+K PG S +E+ + +H F+ D+SHP++ +IYA+L +T
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
Query: 619 RLREHG 624
RLR G
Sbjct: 498 RLRSEG 503
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 173/328 (52%), Gaps = 9/328 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTG--IIDSPLS---ITSLINMYSKCCQMKYALFV 89
CI LQ +++ K ++IH++ +R G I D+ L I L+++ S M YA V
Sbjct: 18 CINLLQTYG-VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKV 75
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVM 148
F+ + NVF +N +I G+ + + MR G++ PD +T+P LIK +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V + IH +V + G +Y+ ++L++ Y C + A KVF+++P +D+V WN+++N
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A+ G+ +AL ++ M+ +GI FT+ +LSA +G G+ VH ++K+G
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ N L+D+Y + V EA +F+ M +K+ SW S++ G + LF M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 329 SA-GFQPDLVTFSTVLPACSHLAALMHG 355
S G P +TF +L ACSH + G
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEG 343
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L G+ +H YM++ G+ + S L+++Y++C +++ A +F+ +
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLE 152
+ N ++ ++I G N F + ++ F +M G+LP + TF ++ C V E
Sbjct: 284 -VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ + + ++ + +V+ + +++A + + +P++ +VV+W +
Sbjct: 343 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 402
Query: 207 -VNGYAQIGEFHK 218
V+G + + EF +
Sbjct: 403 TVHGDSDLAEFAR 415
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 311/584 (53%), Gaps = 16/584 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSP---LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
++++ G+ +H+ +++T +DSP LINMYSK + A V L+ NV ++
Sbjct: 20 SSMRLGRVVHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLVLR-LTPARNVVSW 76
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
+++SG N L F MR+ GV P+ +TFPC+ K + + K+IH L K
Sbjct: 77 TSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVK 136
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
G LDV++G + + Y K + ++A K+F+E+P R++ WNA ++ G +A+E
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEA 196
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F + G + T G L+A G +HG+V + G+D+ V V N LID YGK
Sbjct: 197 FIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGK 256
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + + IF M K+ SW S++ + Q + L+ R + S+V
Sbjct: 257 CKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSV 316
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ +A L GR IH + V + +N +F+ +AL+DMY KCG + D++ F
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERN--------IFVGSALVDMYGKCGCIEDSEQAF 368
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL--KPDEVTFVGVLSACSHSGF 460
+M +K++ + N +I GY GQ AL +F M P+ +TFV +LSACS +G
Sbjct: 369 DEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGA 428
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + M+S YG+ P EHY+C++DMLGRAG + +A+E MP + VW L
Sbjct: 429 VENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQ 488
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
A R+HG L +AA+ +F+L+P GN+VL+SN + A G++ E +R M+ ++K
Sbjct: 489 NACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKK 548
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
G SWI +K+ +H F + DRSH K I L L ++ G
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAG 592
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYA 86
P ++ C L C+ L G ++H + R+G D+ +S+ LI+ Y KC Q++ +
Sbjct: 206 QPNSITFC-GFLNACSDGLLLDLGMQMHGLVFRSGF-DTDVSVYNGLIDFYGKCKQIRSS 263
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F + + N ++ ++++ + N K + R+ V + ++ C
Sbjct: 264 EIIFAEMGMK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAG 322
Query: 147 VMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
MA LE+ + IH K ++ ++++GSALV+ Y KC +E++ + F+E+P +++V N+
Sbjct: 323 -MAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNS 381
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSR--FTVTGVLSALIMMGFFKNG-RVVHGIVV 262
++ GYA G+ AL +F M+ G + T +LSA G +NG ++ +
Sbjct: 382 LIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKS 441
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSI 307
G + G + ++DM G+ V +A E + M K S W ++
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 207/617 (33%), Positives = 321/617 (52%), Gaps = 25/617 (4%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPL 68
NPF S+ + +T F +AS HQ N Q I L ++ P+
Sbjct: 4 NPFPP---ISSRNPTKTLLSLFRFTKTLAS----NHQLNAQ----ILVNALHRSLLFGPM 52
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
+ I + S + A FN+++ E N+ ++N +++ N + L F M +
Sbjct: 53 IFGAYIQLGS----LHVASKAFNHITFE-NLHSWNTILASHSKNKCFYDVLQLFKRMLKE 107
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G L D + +K C + K H L KL L+ D Y+ AL+N Y + +EEA
Sbjct: 108 GKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEA 167
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
KVFEE+PL++ V+W M+ G+ E E+F RM + G + F V G++ A +
Sbjct: 168 HKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNV 227
Query: 249 GFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
K G+ HG+ +K + DS + +L+DMY K + AL++FE + +D+ W++I
Sbjct: 228 YAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAI 287
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + G ++ +F +ML+ P+ VTF++++ ACS L +L GR +HGY++ NG+
Sbjct: 288 IAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV 347
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DV + +DMY KCG + A VF ++ +K+V SW+ MI G+GM G
Sbjct: 348 EL--------DVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCA 399
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EAL++F M P+ VTFV VLSACSHSG + +G M YG+ P EHY C+
Sbjct: 400 EALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACM 459
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+D+LGRAG+++EA MP E W LL A R+H +LAE A+++ LE
Sbjct: 460 VDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQS 519
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
G YV++SNIY G +E V R M ++ + K G + IE+++ L+ F S DR +
Sbjct: 520 GVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNT 579
Query: 608 SIYAELHSLTARLREHG 624
I + +SL R+RE G
Sbjct: 580 QIESLWNSLKERMRELG 596
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 327/595 (54%), Gaps = 15/595 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +CA + + G+ +H + ++ + + +L++MYSKC + A +F
Sbjct: 42 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 101
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMA 149
++ NV ++N M+ GF + D M G V D+ T + C
Sbjct: 102 -MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 160
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +K++H K + + +A V +Y KC + A +VF + + V WNA++ G
Sbjct: 161 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 220
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ + +L+ +M G+ FTV +LSA + + G+ VHG +++ +
Sbjct: 221 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 280
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V +++ +Y + +F+ ME+K + SWN+++T + Q G D L +F +M+
Sbjct: 281 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 340
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G Q ++ V ACS L +L GR+ H Y + + L DD F+ +L+DMY
Sbjct: 341 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE--------DDAFIACSLIDMY 392
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K GS+ + VF + +K ASWN MI+GYG+ G KEA+ +F M PD++TF+
Sbjct: 393 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 452
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE-LALAMP 508
GVL+AC+HSG + +G +L M+S +G+ P ++HY CVIDMLGRAGQL++A +A M
Sbjct: 453 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 512
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
EA+ +W++LL++ R+H N ++ E A ++F+LEP NYVL+SN+Y GK+E+V
Sbjct: 513 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 572
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR---SHPEAKSIYAELHSLTARL 620
+R M + ++RK+ GCSWIEL + +F+ +R E KS+++ L +++
Sbjct: 573 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM 627
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 200/440 (45%), Gaps = 24/440 (5%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEV 153
N ++N+MI F N F+ + M + +PD T ++ C +
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K +HG KL LD ++ + +AL++ Y KC + A +F+ ++VV WN MV G++
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121
Query: 214 GEFHKALEVFRRM--SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G+ H +V R+M E + T+ + F + + +H +K +
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V NA + Y K + A +F + K + SWN+++ H Q + +L +M +G
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 241
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T ++L ACS L +L G+++HG+I+ N L + D+F+ +++ +Y
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER--------DLFVYLSVLSLYIH 293
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + Q +F M K + SWN +I GY +G AL +F M ++ ++ + V
Sbjct: 294 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 353
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEH---YTC-VIDMLGRAGQLNEAYELALAM 507
ACS L GRE Y + +E C +IDM + G + ++ ++ +
Sbjct: 354 FGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 408
Query: 508 PNEANPVVWRTLLAASRLHG 527
E + W ++ +HG
Sbjct: 409 -KEKSTASWNAMIMGYGIHG 427
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 156/341 (45%), Gaps = 16/341 (4%)
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE---GIWMSRF-TVTGVLSALIMMGFFKN 253
R+ V WN+M+ ++ G ++ + M +E G +M T+ VL
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VHG VK+ D + + NAL+DMY K C+ A IF+M K++ SWN+++
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 314 CGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G+ GT + +ML+ G + D VT +P C H + L +++H Y + N
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALD 431
+ NA + Y KCGS+ AQ VF + K V SWN +I G+ + +LD
Sbjct: 181 --------LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 232
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
M + L PD T +LSACS L G+E + R + + Y V+ +
Sbjct: 233 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLY 291
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
G+L L AM +++ V W T++ +G D A
Sbjct: 292 IHCGELCTVQALFDAMEDKS-LVSWNTVITGYLQNGFPDRA 331
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 313/556 (56%), Gaps = 15/556 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG- 129
++L +Y ++ +A VF+ + P+ +N +++G ++ ++ F M G
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVP-SPDTVLWNTLLAGLSGSE----AVESFARMVCDGS 207
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
V PD T ++ +V V + +H K GL ++ + L++ Y KC +E A
Sbjct: 208 VRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESAR 267
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F+ + D+V +NA+++GY+ G ++ +F + G+W + T+ ++ G
Sbjct: 268 CLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFG 327
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ +HG V+K G+ + PV A+ ++ + + A + F+ M EK + SWN++++
Sbjct: 328 HDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMIS 387
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ Q G + + LF++M+ +P+ +T S+ L AC+ L AL G+ +H I L
Sbjct: 388 GYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEP 447
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N V++ AL+DMY KCGS+ +A+ +F M K+V SWN MI GYG+ GQG EA
Sbjct: 448 N--------VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEA 499
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
L ++ M +A L P TF+ VL ACSH G + +G + M Y + P IEH TC++D
Sbjct: 500 LKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVD 559
Query: 490 MLGRAGQLNEAYELALAMPNEA-NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCG 548
+LGRAGQL EA+EL P A P VW LL A +H ++DLA++A+Q++F+L+P + G
Sbjct: 560 LLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSG 619
Query: 549 NYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKS 608
YVL+SN++ + +Y E +R + + + K PG + IE+ + H F++ DR+HP++++
Sbjct: 620 YYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEA 679
Query: 609 IYAELHSLTARLREHG 624
IY+ L LTA++ E G
Sbjct: 680 IYSYLEKLTAKMIEAG 695
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 197/579 (34%), Positives = 307/579 (53%), Gaps = 14/579 (2%)
Query: 53 EIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+IH++++ TG + + SI+ LI + ++ YA VF+ L + V YN+MI +
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELP-QRGVSVYNSMIVVYSR 93
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ L ++ M + PD TF IK C + + + + + G DV++
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFV 153
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
S+++N Y+KC M+EA +F ++ RDV+ W MV G+AQ G+ KA+E +R M EG
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGF 213
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
R + G+L A +G K GR VHG + + G V V +L+DMY K + A
Sbjct: 214 GRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASR 273
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+F M K SW S+++ Q G + M S GFQPDLVT VL ACS + +
Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGS 333
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GR +H YI+ + + D ALMDMY+KCG++ ++ +F + +KD+
Sbjct: 334 LKTGRLVHCYILK---------RHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLV 384
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
WN MI YG+ G G+E + +F M E+ ++PD TF +LSA SHSG + QG+ + +M
Sbjct: 385 CWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVM 444
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
++Y + P+ +HY C+ID+L RAG++ EA ++ + + +W LL+ H N +
Sbjct: 445 INKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSV 504
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+IAA ++ QL P G L+SN + K++EV +R MR + K PG S IE+
Sbjct: 505 GDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNG 564
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGT 630
L TF+ D SH E + L +L +R D C+G
Sbjct: 565 ELRTFLMEDLSHHEHYHMLQVLRNLKTEIR---DVCSGV 600
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 167/325 (51%), Gaps = 2/325 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T +++ C L+KG+ + + G + +S++N+Y KC +M A +F
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGK 176
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ + +V + M++GF + K ++F+ M+ G D+ L++ D+
Sbjct: 177 MA-KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +HG +++ GL ++V + ++LV+ Y K F+E A +VF + + V W ++++G+AQ
Sbjct: 236 GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +KA E M G T+ GVL A +G K GR+VH ++K V
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA 355
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+DMY K + + EIFE + KD+ WN++++ + GN + LF +M +
Sbjct: 356 -TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQ 357
+PD TF+++L A SH + G+
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQH 439
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ + + G+ +H Y+ RTG+ + + TSL++MY+K ++ A VF+ + +
Sbjct: 224 LQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTA 283
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ ++ISGF N A K + M+ LG PD T ++ C V ++ + +H
Sbjct: 284 V-SWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHC 342
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K + LD +AL++ Y KC + + ++FE + +D+V WN M++ Y G +
Sbjct: 343 YILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQE 401
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV-KMGYDSGVPVMNALI 277
+ +F +M++ I T +LSAL G + G+ +++ K LI
Sbjct: 402 VVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLI 461
Query: 278 DMYGKGKCVGEALEIF 293
D+ + V EAL++
Sbjct: 462 DLLARAGRVEEALDMI 477
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 11/208 (5%)
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
H QIH +++ G NGS D L+ + G + A+ VF ++ ++ V+ +
Sbjct: 32 HITQIHAFVISTGNLLNGSSISRD-------LIASCGRIGEISYARKVFDELPQRGVSVY 84
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N MI+ Y E L ++ M K++PD TF + AC SG + + E +
Sbjct: 85 NSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAV 143
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G + + V+++ + G+++EA E+ + + + W T++ G + L
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEA-EVLFGKMAKRDVICWTTMVTGFAQAGKS-LKA 201
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
+ R Q E G + V+M + A G
Sbjct: 202 VEFYREMQNE-GFGRDRVVMLGLLQASG 228
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q+ L T + L C+ +L+ G+ +H Y+L+ ++D ++ T+L++MYSKC +
Sbjct: 310 QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR-VTATALMDMYSKCGAL 368
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
+ +F ++ ++ +N MIS + + + + F M + + PD TF L+
Sbjct: 369 SSSREIFEHVG-RKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 186/555 (33%), Positives = 309/555 (55%), Gaps = 20/555 (3%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI +++A VF+ + + +V + AM+SG+ SN LD F M GV
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMP-DRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 131 LPDKYTFPCLIKCCCDVMA--VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ---FM 185
P+++T ++ C A E +H + + G+D Y+ +AL+ Y C+ +
Sbjct: 66 GPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGV 125
Query: 186 EEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
EE+ K+F+ L R W +MV GY++ G+ L++F+ M ++GI +S FT + L A
Sbjct: 126 EESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHA 185
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ G+ +H + ++ +++ + V N+LIDMY + +A +F+ + E+++ +W
Sbjct: 186 CASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTW 245
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
N+++ + QC NH L+L M QP+ T +++ AC+ LA+L G+Q+HG +
Sbjct: 246 NTMIAWYSQC-NHLMALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAALR 301
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
K D+ M NAL+DMY+KCGS+ +A+ +F M KD SW MI GYGM+G
Sbjct: 302 RNYGK--------DLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNG 353
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
E++ +F+ M A + PD V F+G++ AC+H G + +G F M S Y + P E Y
Sbjct: 354 YANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIY 413
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
CV ++L RAG+L EA++L MP + VW LL A ++H N +L +AA+++ ++ P
Sbjct: 414 GCVTNLLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINP 473
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
YVL++NIY AG K+ E D R +R RK G SWI++ D +++F ++D S P
Sbjct: 474 DRAKTYVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSFTTADSSSP 533
Query: 605 EAKSIYAELHSLTAR 619
+ S+ E+ + AR
Sbjct: 534 QV-SLADEVLQILAR 547
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 8/226 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PFT C +L CA NL GQ++H LR + SLI+MY C + A
Sbjct: 176 PFT---CSIALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARR 232
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + E N+ T+N MI+ +YS L +R++ + P+ +T + C +
Sbjct: 233 LFDEIP-ERNLVTWNTMIA-WYSQCNHLMALQL---LREMNLQPNCFTLTSITSACAGLA 287
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++ +++HG + D+ + +ALV+ Y KC + A K+F + +D + W +M+
Sbjct: 288 SLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMIT 347
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
GY G ++++++F M G+ G++ A G G
Sbjct: 348 GYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEG 393
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 307/556 (55%), Gaps = 14/556 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+ L+ C L G+ +H Y+++ GI DSP+ I++L +MYSKC + A +F L E
Sbjct: 225 SGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELP-E 283
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ ++I + + ++ F M + G+ PD+ C++ + V K
Sbjct: 284 KDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTF 343
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H ++ K V IG+AL++ Y K + ++ A +VF L RD WN MV GY + G
Sbjct: 344 HAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCD 403
Query: 217 HKALEVFRRMS---KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
K LE++R M K W ++ +S+ + + GR H +K D V
Sbjct: 404 VKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVA 463
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N LI MYG+ A +IF + + K D+ +WN++++ + G+ + + L+D+ML G
Sbjct: 464 NVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGL 523
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ T TV+ AC++L AL G +IH Y+ G DV +N AL+DMY KC
Sbjct: 524 TPNSTTLITVISACANLVALERGEKIHSYVKEMGWDY--------DVSINTALIDMYAKC 575
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A+ +F M + DV +WN+MI GYGM G+ K+AL++F M +KP+ VTF+ +L
Sbjct: 576 GQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAIL 635
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SA HSG L +GR+ M +Y + P ++HY C++D+LG++G L EA ++ LAMP E +
Sbjct: 636 SALCHSGLLEEGRKVFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPD 694
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W TLL+A +LH N ++ A++ F +P + G Y+L+SN Y K++E+ +R T
Sbjct: 695 GGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRET 754
Query: 573 MRQQNVRKNPGCSWIE 588
M+ V+K G S ++
Sbjct: 755 MKNLGVQKGVGWSAVD 770
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 251/517 (48%), Gaps = 28/517 (5%)
Query: 29 PFTLA-TCIASLQLCAHQTNLQKGQEIHSYMLRTGII----DSPLSITSLINMYSKCCQM 83
PFT AS +L A L G +H+Y +R G++ DS +SL+ MY++C +
Sbjct: 111 PFTAPLAASASAELGA----LGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNV 166
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG----VLPDKYTFPC 139
+ A+ VF + E +V + A+ISG N + +GL + M +L V P+ T
Sbjct: 167 RDAVKVFEEMP-ERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMES 225
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
++ C + + + +HG V K+G+ + SAL + Y KC E+A +F ELP +D
Sbjct: 226 GLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKD 285
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV W +++ Y + G +A+E+F++M + G+ V+ VLS L G G+ H
Sbjct: 286 VVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHA 345
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
++ K + V + NALI MYGK + V A +F ++ ++D SWN ++ + + G
Sbjct: 346 VITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVK 405
Query: 320 TLRLFDRM-LSAGFQPDLVTFSTV--LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
L L+ M L ++ V S V + +CS LA L GR H Y + + L ++ S
Sbjct: 406 CLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSS---- 461
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ N L+ MY +CG A +F K DV +WN +I Y G A+ ++
Sbjct: 462 ----VANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQ 517
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAG 495
M L P+ T + V+SAC++ L +G + ++ G + T +IDM + G
Sbjct: 518 MLIEGLTPNSTTLITVISACANLVALERGEKIHSYVK-EMGWDYDVSINTALIDMYAKCG 576
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
QL A + +M + V W +++ +HG A
Sbjct: 577 QLGIARRIFDSMLQH-DVVAWNVMISGYGMHGEAKQA 612
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 16/333 (4%)
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
VLE+ ++H L GL + + LV+ Y A F P D LWN+++
Sbjct: 26 VLELLRVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRT 85
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ +F AL RRM G S FT SA +G G VH V+ G G
Sbjct: 86 HHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVG 145
Query: 270 ----VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
V V ++L+ MY + V +A+++FE M E+D+ +W ++++ + G LR
Sbjct: 146 DGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLV 205
Query: 326 RML----SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
M+ +P+ T + L AC L L GR +HGY+V G+ D +
Sbjct: 206 EMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIG--------DSPMV 257
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL MY+KC S DA +F ++ +KDV SW +I Y G EA+++F M E+ L
Sbjct: 258 ISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGL 317
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+PDE+ VLS ++G + G+ F ++ R
Sbjct: 318 QPDEILVSCVLSGLGNNGNVHGGKTFHAVITKR 350
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 184/395 (46%), Gaps = 24/395 (6%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
L +C+ L + N+ G+ H+ + + DS L +LI+MY K + A VF
Sbjct: 323 LVSCV--LSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFR 380
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL-------IKCC 144
L + + ++N M+ G+ K L+ + M+ L DKY F C+ I C
Sbjct: 381 LLH-QRDADSWNLMVVGYCKAGCDVKCLELYREMQ----LRDKYEFWCVADSLVSAISSC 435
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ + + H K LD D + + L+ Y +C + A K+F L+ DVV W
Sbjct: 436 SRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTW 495
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N +++ YA +G + A+ ++ +M EG+ + T+ V+SA + + G +H V +
Sbjct: 496 NTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKE 555
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
MG+D V + ALIDMY K +G A IF+ M + D+ +WN +++ + G L L
Sbjct: 556 MGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALEL 615
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F +M +P+ VTF +L A H L GR++ + L N +
Sbjct: 616 FGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPN--------LKHYA 667
Query: 384 ALMDMYTKCGSMRDAQ-MVFTKMSKKDVASWNIMI 417
++D+ K G +++A+ MV + D W ++
Sbjct: 668 CMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLL 702
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 152/299 (50%), Gaps = 3/299 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNN 92
+ ++++ C+ L+ G+ H Y ++ ++D S+ + LI MY +C + +A +F
Sbjct: 427 SLVSAISSCSRLAELRLGRSAHCYSIKH-LLDEDSSVANVLIGMYGRCGKFDHACKIFGL 485
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V T+N +IS + + + ++ M G+ P+ T +I C +++A+
Sbjct: 486 AKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALER 545
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+KIH V ++G D DV I +AL++ Y KC + A ++F+ + DVV WN M++GY
Sbjct: 546 GEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGM 605
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
GE +ALE+F +M I + T +LSAL G + GR V + K + +
Sbjct: 606 HGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKH 665
Query: 273 MNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
++D+ GK + EA + + M E D W ++++ + N + LR+ + ++
Sbjct: 666 YACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFAS 724
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 307/583 (52%), Gaps = 59/583 (10%)
Query: 76 MYSKCCQ---MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
M S C + ++ A +F+ + E +V ++NAM+SG+ N + + + F+ M
Sbjct: 117 MISGCVRYRNLRAARLLFDQMP-ERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------- 168
Query: 133 DKYTFPCLIKCCCDVM--AVLEVKKIHGL--VFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
PC + M A ++ +I +F+ D ++ + ++ Y+K + +A
Sbjct: 169 -----PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDA 223
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+F+ +P RD V WN M++GYAQ GE +A +F + FT T ++S +
Sbjct: 224 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQN 279
Query: 249 GFFKNGR----------------VVHGIVVKMGYDSG-----------VPVMNALIDMYG 281
G R ++ G V D V N +I Y
Sbjct: 280 GMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYA 339
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+ + +A F+ M ++D SW +I+ + Q G + L LF M G + + TF++
Sbjct: 340 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTS 399
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
L C+ +AAL G+Q+HG +V GL ++ NAL+ MY KCG++ DA +V
Sbjct: 400 TLSTCAEIAALELGKQVHGRVVKAGLESG--------CYVGNALLVMYCKCGNIDDAYIV 451
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F + +K+V SWN MI GY G GKEAL +F M + + PD+VT VGVLSACSH+G +
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G E+ M YG+ +HYTC+ID+LGRAG+L++A L MP E + W LL
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
ASR+HGNT+L E AA+ +F++EP + G YVL+SN+Y A G++ +V +R MR + V+K
Sbjct: 572 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 631
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PG SW+E+++ +HTF D HPE IY L L ++++ G
Sbjct: 632 PGYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEG 674
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 220/519 (42%), Gaps = 85/519 (16%)
Query: 34 TCIASLQLC--AHQTNLQKGQEIHSYMLRTG--IIDSPLSITSLINMYSKCCQMKYALFV 89
+C+ SLQ A++ + Q + L T I+ ++IT+ + + Q AL +
Sbjct: 16 SCLRSLQTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITN----HMRNGQCDSALRL 71
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN++ ++ ++NAMISG SND + F M D ++ +I C
Sbjct: 72 FNSMPRRSSI-SWNAMISGCLSNDKFYLARQLFEKM----PTRDLVSWNVMISGC----- 121
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++ + + A +F+++P RDVV WNAM++G
Sbjct: 122 ------------------------------VRYRNLRAARLLFDQMPERDVVSWNAMLSG 151
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ G +A E+F M + + + G+L+A + G ++ R + + D
Sbjct: 152 YAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIEDARR----LFESKADWE 203
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ N ++ Y K + +A IF+ M E+D SWN++++ + Q G RLF+
Sbjct: 204 LISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE--- 260
Query: 330 AGFQP--DLVTFSTVLPACSHLAALMHGRQI-HGYIVVNGLAKNG------SCKDID--- 377
P D+ T++ ++ L R++ G N ++ N CK +D
Sbjct: 261 ---SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQAR 317
Query: 378 ---------DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
+V N ++ Y + G + A+ F +M ++D SW +I GY G G+E
Sbjct: 318 ELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEE 377
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
AL +F M + + TF LS C+ L G++ + + G+ ++
Sbjct: 378 ALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV-VKAGLESGCYVGNALL 436
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M + G +++AY + E V W T++A HG
Sbjct: 437 VMYCKCGNIDDAY-IVFEGIEEKEVVSWNTMIAGYARHG 474
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 34/284 (11%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
+ +S ++I Y +C +M A +F + C+ NV ++N MI+G+ N + +FF+ M
Sbjct: 296 NSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIAQARNFFDRM 354
Query: 126 RQL-------------------------------GVLPDKYTFPCLIKCCCDVMAVLEVK 154
Q G ++ TF + C ++ A+ K
Sbjct: 355 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGK 414
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++HG V K GL+ Y+G+AL+ Y KC +++A VFE + ++VV WN M+ GYA+ G
Sbjct: 415 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 474
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVM 273
+AL +F M K GI T+ GVLSA G G + + G +
Sbjct: 475 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 534
Query: 274 NALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ID+ G+ + +A + + M E D +W +++ GN
Sbjct: 535 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 578
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T ++L CA L+ G+++H +++ G+ +L+ MY KC + A VF
Sbjct: 395 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 454
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E V ++N MI+G+ + F + L F M++ G+LPD T ++ C V +
Sbjct: 455 IE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 513
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ + + G+ + + +++ + +++A + + +P D W A+
Sbjct: 514 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 573
Query: 207 -VNGYAQIGE 215
++G ++GE
Sbjct: 574 RIHGNTELGE 583
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 327/595 (54%), Gaps = 15/595 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +CA + + G+ +H + ++ + + +L++MYSKC + A +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMA 149
++ NV ++N M+ GF + D M G V D+ T + C
Sbjct: 352 -MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +K++H K + + +A V +Y KC + A +VF + + V WNA++ G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ + +L+ +M G+ FTV +LSA + + G+ VHG +++ +
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V +++ +Y + +F+ ME+K + SWN+++T + Q G D L +F +M+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G Q ++ V ACS L +L GR+ H Y + + L DD F+ +L+DMY
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE--------DDAFIACSLIDMY 642
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K GS+ + VF + +K ASWN MI+GYG+ G KEA+ +F M PD++TF+
Sbjct: 643 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 702
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE-LALAMP 508
GVL+AC+HSG + +G +L M+S +G+ P ++HY CVIDMLGRAGQL++A +A M
Sbjct: 703 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 762
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
EA+ +W++LL++ R+H N ++ E A ++F+LEP NYVL+SN+Y GK+E+V
Sbjct: 763 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 822
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR---SHPEAKSIYAELHSLTARL 620
+R M + ++RK+ GCSWIEL + +F+ +R E KS+++ L +++
Sbjct: 823 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM 877
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 249/502 (49%), Gaps = 19/502 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ + +++ G++IH + T + + + T +I MY+ C + FVF+ L +
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK- 149
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA+IS + N+ + L+ F M +LPD +T+PC+IK C + V +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGLV K GL DV++G+ALV+ Y F+ +AL++F+ +P R++V WN+M+ ++ G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 217 HKALEVFRRMSKE---GIWMSRF-TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
++ + M +E G +M T+ VL G+ VHG VK+ D + +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG- 331
NAL+DMY K C+ A IF+M K++ SWN+++ G+ GT + +ML+ G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 332 -FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D VT +P C H + L +++H Y + N + NA + Y
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--------LVANAFVASYA 441
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ AQ VF + K V SWN +I G+ + +LD M + L PD T
Sbjct: 442 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACS L G+E + R + + Y V+ + G+L L AM ++
Sbjct: 502 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 511 ANPVVWRTLLAASRLHGNTDLA 532
+ V W T++ +G D A
Sbjct: 561 S-LVSWNTVITGYLQNGFPDRA 581
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 191/641 (29%), Positives = 326/641 (50%), Gaps = 43/641 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
L + + L C G ++H++ + +G+ + + L+ YS A +
Sbjct: 41 LVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI 100
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
N S + +N +I+ + N+ + + + M G+ PD +T+P ++K C + +
Sbjct: 101 IEN-SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V + +HG + +Y+ +AL++ Y + + M A ++F+ + RD V WNA++N
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV---------------------------- 241
YA G + +A E+F +M G+ +S T +
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 242 -------LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
L A ++G + G+ +HG+ + YD V N LI MY K K + AL +F
Sbjct: 280 PVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR 339
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
EE + +WNSI++ + Q + L ML AGFQP+ +T +++LP C+ +A L H
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQH 399
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G++ H YI+ K D + N+L+D+Y K G + A+ V MSK+D ++
Sbjct: 400 GKEFHCYILRRKCFK-------DYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYT 452
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+I GYG G+G AL +F M + +KPD VT V VLSACSHS + +G M+
Sbjct: 453 SLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCE 512
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
YG+ P ++H++C++D+ GRAG L +A ++ MP + + W TLL A +HGNT + +
Sbjct: 513 YGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKW 572
Query: 535 AAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLH 594
AA+++ +++P + G YVL++N+Y A G + ++ ++R MR V+K+PGC+WI+ G
Sbjct: 573 AAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFS 632
Query: 595 TFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
F D S PEA + Y L L ++++ + SD
Sbjct: 633 LFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINKVQSSD 673
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 211 AQIGEFHKALEVF---RRMSKEGIW--MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
A G H A + F R S + + + +LSA + + F G VH + G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ ++ L+ Y EA I E + WN ++ + + + + +
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM+S G +PD T+ +VL AC + GR +HG I V+ + +++ NAL
Sbjct: 134 RMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSS--------LYVCNAL 185
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY + +M A+ +F +M ++D SWN +I Y +G EA ++F M + ++
Sbjct: 186 ISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSV 245
Query: 446 VTFVGVLSACSHSG 459
+T+ + C +G
Sbjct: 246 ITWNIISGGCLQTG 259
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 317 HDG--TLRLFDRMLSAGFQPDLVTFS--TVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
HD T L S+ DLV S ++L AC + A + G Q+H + + +G+ +
Sbjct: 20 HDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHS- 78
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+ L+ Y+ +AQ + WN++I Y + +E +
Sbjct: 79 -------VLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAA 131
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+ M ++PD T+ VL AC + ++ GR
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 296/534 (55%), Gaps = 65/534 (12%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK--YTFPCLIKCCCDVMAVLEVKK 155
NV +NAMI+ + N + + F M P+K ++ +I + + E ++
Sbjct: 263 NVVAWNAMIAAYVQNCHVDEAISLFMEM------PEKNSISWTTVINGYVRMGKLDEARQ 316
Query: 156 I-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+ + + ++ +V +A+++ Y++ + M++A ++F ++ +RDVV WN M+ GY+Q G
Sbjct: 317 LLNQMPYR-----NVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCG 371
Query: 215 EFHKALEVFRRMSKEGI--WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+AL +F++M K+ I W
Sbjct: 372 RMDEALHLFKQMVKKDIVSW---------------------------------------- 391
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N ++ Y + + A++IFE M+EK+I SWNS+++ Q G++ L+ F M G
Sbjct: 392 -NTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQ 450
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD TF+ L +C+HLAAL G+Q+H ++ +G A D+F++NAL+ MY KC
Sbjct: 451 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYAT--------DLFVSNALITMYAKC 502
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
GS+ A+++F + DV SWN +I Y ++G G+EAL +F M + PDEVTFVG+L
Sbjct: 503 GSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGIL 562
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSH G + QG + M Y + P EHY C++D+LGRAG+L EA++L M AN
Sbjct: 563 SACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINAN 622
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W LL A R+HGN +LA+ AA+++ + EP NYVL+SN+ G+++EV +R
Sbjct: 623 AGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRL 682
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
M+++ K PG SWIEL++ +H F+S D +HP A + L SLTA +R C
Sbjct: 683 MKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAKC 736
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 227/511 (44%), Gaps = 78/511 (15%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
S+I+ ++K ++ A +F+ + + N+ ++N+MI+ + ND + F+ M
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMP-QRNIVSWNSMIAAYLHNDRVEEARQLFDKMPT--- 105
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D Y++ +I C E+ K L L + +A+V Y K + +EA +
Sbjct: 106 -RDLYSWTLMITCYTRNG---ELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARR 161
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F+ +P +D+V WN+M+ GY + GE L+ F M++ + V L++ GF
Sbjct: 162 LFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV---------VSWNLMVDGF 212
Query: 251 FKNGRVVHG--IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
+ G + K+ + V + L GK + EA +F+ M +++ +WN+++
Sbjct: 213 VEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGK-IAEARRLFDQMPIRNVVAWNAMI 271
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI------ 362
+ Q + D + LF M + + ++++TV+ + L RQ+ +
Sbjct: 272 AAYVQNCHVDEAISLFMEMP----EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVA 327
Query: 363 ----VVNGLAKNGSCKD---------IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+++G +N D I DV N ++ Y++CG M +A +F +M KKD
Sbjct: 328 AQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKD 387
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKL---------------------------- 441
+ SWN M+ Y GQ A+ +F M E +
Sbjct: 388 IVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGH 447
Query: 442 ---KPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQL 497
KPD+ TF LS+C+H L G++ L M+S Y + + +I M + G +
Sbjct: 448 EGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN--ALITMYAKCGSI 505
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+ A EL + + V W +L+AA L+GN
Sbjct: 506 SSA-ELLFKDIDHFDVVSWNSLIAAYALNGN 535
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 188/427 (44%), Gaps = 53/427 (12%)
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+++++ + K + +A ++F+ +P R++V WN+M+ Y +A ++F +M +
Sbjct: 50 NSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL- 108
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
++ T +++ G R + + + Y NA++ Y K + EA +
Sbjct: 109 ---YSWTLMITCYTRNGELAKARNLFNL---LPYKWNPVCCNAMVAGYAKNRQFDEARRL 162
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ M KD+ SWNS++T + + G L+ F+ M + D+V+++ +
Sbjct: 163 FDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA----ERDVVSWNLM---------- 208
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR-----DAQMVFTKMSK 407
+ G++ V L N S + + + N + + CG R +A+ +F +M
Sbjct: 209 -----VDGFVEVGDL--NSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPI 261
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
++V +WN MI Y + EA+ +F M E + +++ V++ G L + R+
Sbjct: 262 RNVVAWNAMIAAYVQNCHVDEAISLFMEMPE----KNSISWTTVINGYVRMGKLDEARQL 317
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L M R + T +I + ++++A ++ + + V W T++A G
Sbjct: 318 LNQMPYR-----NVAAQTAMISGYVQNKRMDDARQI-FNQISIRDVVCWNTMIAGYSQCG 371
Query: 528 NTDLAEIAAQRVF-QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
D A +F Q+ ++ M Y G+ + + I M+++N+ SW
Sbjct: 372 RMD----EALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNI-----VSW 422
Query: 587 IELKDGL 593
L GL
Sbjct: 423 NSLISGL 429
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T L CAH LQ G+++H ++++G +LI MY+KC + A +F +
Sbjct: 455 STFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKD 514
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+ +V ++N++I+ + N + L F+ M GV PD+ TF ++ C V
Sbjct: 515 ID-HFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHV 568
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 364 VNGLAKNGSCKDIDDVFMN---------NALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
+ L K+G + VF + N+++ + K G + DA+ +F M ++++ SWN
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWN 81
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI Y + + +EA +F M L ++ +++ + +G L++ R L+ +
Sbjct: 82 SMIAAYLHNDRVEEARQLFDKMPTRDL----YSWTLMITCYTRNGELAKARNLFNLLPYK 137
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
+ V ++ + Q +EA L AMP + + V W ++L +G L
Sbjct: 138 WNPVCC----NAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRL 189
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/508 (35%), Positives = 286/508 (56%), Gaps = 41/508 (8%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK--VFEELPLRDVVLWNAMVNG 209
+VK++H +F+ GL+ ++ + L+ T K + VF+++ + LW A++ G
Sbjct: 54 QVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRG 113
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDS 268
YA G F +++ ++ M ++GI FT T +L A GR VH + +G + S
Sbjct: 114 YALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGS 173
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--- 325
+ V N LIDMY K C+G +F+ M ++D+ SW S++ + + GN + LFD
Sbjct: 174 DLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLP 233
Query: 326 ----------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
RM +AG + D VT V+ AC+ L A +
Sbjct: 234 MKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANW 293
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
V +A+ +V + +AL+DMY KCGS+ DA VF +M +++V S++ MI
Sbjct: 294 ------VRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMI 347
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
+G+ M G A+++F M + ++KP+ VTF+GVL+ACSH+G + QG++ +ME +GV
Sbjct: 348 VGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGV 407
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P+ +HY C++D+LGRAG+L EA L MP + VW LL A R+HGN D+A+IAA
Sbjct: 408 APSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAAS 467
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG-LHTF 596
+F+LEP GNY+L+SNIY + G++++V +R MR + ++KNPGCSW+E K G +H F
Sbjct: 468 HLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEF 527
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
+ D SHP+++ I L L RL+ G
Sbjct: 528 FAGDMSHPKSREIKQALEDLLDRLKYLG 555
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 172/349 (49%), Gaps = 37/349 (10%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK--CCQMKYALFVFNNLSCEPNVFTYN 103
T++ + +++H+++ R G+ + L+ +K Y VF + PN F +
Sbjct: 50 THINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVE-YPNPFLWT 108
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
A+I G+ + + +N MR+ G+ P +TF L+K C + V +++H +
Sbjct: 109 ALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILI 168
Query: 164 -GLDLDVYIGSALVNTYLKCQF-------------------------------MEEALKV 191
G D+Y+G+ L++ Y+KC ME A ++
Sbjct: 169 GGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASEL 228
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
F+ LP++D+V W AMV GYAQ +ALEVF RM G+ T+ GV+SA +G
Sbjct: 229 FDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAA 288
Query: 252 KNGRVVHGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
K V + + G+ S V V +ALIDMY K V +A ++FE MEE++++S++S++
Sbjct: 289 KYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIV 348
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
G + LFD ML +P+ VTF VL ACSH + G+Q+
Sbjct: 349 GFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQL 397
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 329/596 (55%), Gaps = 14/596 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + ++ G+++H ++ + S + ++MYSK + A +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ ++NA+ G N + + MR G+ PD +F I C ++ A
Sbjct: 488 PYKDSI-SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L K G+ + +GS+L++ Y K +E + K+F ++ +V NA++ G+ Q
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--YDSGVP 271
+A+++F+++ K+G+ S T + +LS G+ VH +K G YD +
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL- 665
Query: 272 VMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ +L +Y K K + +A ++ EM + K++F W +I++ + Q G D +L F RM
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D TF++VL ACS + A G++IHG I +G + +AL+DMY+
Sbjct: 726 NVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA--------TSALIDMYS 777
Query: 391 KCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + + F ++ +K+D+ WN MI+G+ +G EAL +F M E ++KPDEVTF+
Sbjct: 778 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC+HSG +S+GR F M YG+ P ++HY C ID+LGR G L EA E +P
Sbjct: 838 GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ VVW T LAA R+H + + +IAA+++ +LEP + YVL+S+++ A G + E
Sbjct: 898 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
R +MR++ V K PGCSWI + + F+ D+ HP+ IY L LT +++ D
Sbjct: 958 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDND 1013
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 262/515 (50%), Gaps = 12/515 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A+ +GQ++H+ + G+ + +SLIN+Y+KC A VF
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+LSCE N+ +NAM++GF N+ + + F +M + + D++TF ++ C + +
Sbjct: 384 -DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 442
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K++H + K +D+ +++ +A ++ Y K + +A +F +P +D + WNA+ G
Sbjct: 443 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 502
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ E +A+ + +RM GI + + ++A + + G+ +H + +K G S
Sbjct: 503 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 562
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID+Y K V + +IF ++ I N+++ Q N D ++LF ++L
Sbjct: 563 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 622
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P VTFS++L CS G+Q+H Y + +G+ DD + +L +Y
Sbjct: 623 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVL-------YDDTLLGVSLAGIYL 675
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K + DA + T+M K++ W +I GY +G G +L F M ++ DE TF
Sbjct: 676 KSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFA 735
Query: 450 GVLSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL ACS + G+E L+ +S +G T + +IDM + G + ++E +
Sbjct: 736 SVLKACSDVTAFADGKEIHGLITKSGFGSYETAT--SALIDMYSKCGDVISSFEAFKELK 793
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
N+ + + W +++ +G D A + Q++ +L+
Sbjct: 794 NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 253/509 (49%), Gaps = 16/509 (3%)
Query: 35 CIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C +S+ C H+ Q+ + S M + G +++ ++I+ + ++ +A + +
Sbjct: 226 CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+ +NA+ISG + F L + MR G+ P + TF ++ ++ A +E
Sbjct: 286 P-TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 344
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H GLD +V++GS+L+N Y KC +A VF+ +++V+WNAM+ G+ Q
Sbjct: 345 QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN 404
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+A+ +F+ M + + FT +L A + F G+ VH + +K D + V
Sbjct: 405 ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVA 464
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA +DMY K +G+A +F ++ KD SWN++ Q + + + RM G
Sbjct: 465 NATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGIT 524
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V+FST + ACS++ A G+QIH + G+ N + + ++L+D+Y+K G
Sbjct: 525 PDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA--------VGSSLIDLYSKHG 576
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ ++ +F ++ + N +I G+ + EA+ +F + + LKP VTF +LS
Sbjct: 577 DVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILS 636
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG---RAGQLNEAYELALAMPNE 510
CS S + G++ + + GV+ + + + G ++ L +A +L MP+
Sbjct: 637 GCSGSLNSAIGKQ-VHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
N W +++ +G D + ++ R+
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRM 722
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 251/508 (49%), Gaps = 48/508 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L G+++H ++++G S +L++MY+KC + A VF+ ++C P+
Sbjct: 165 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PD 223
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++MI+ ++ + L F+ M ++G PD+ T +I
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTII----------------- 266
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+T ++ A + +++P V WNA+++G+AQ G
Sbjct: 267 ------------------STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +++ M G+W +R T +LSA M F G+ +H V G D+ V V ++LI+
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C +A +F++ EK+I WN+++T Q + +R+F M+ Q D T
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC++L++ G+Q+H + N C DI +F+ NA +DMY+K G++ DA
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKN-------CMDI-SLFVANATLDMYSKYGAIGDA 480
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ + KD SWN + +G + + +EA+ M M + PD+V+F ++ACS+
Sbjct: 481 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G++ + + +YG+ + +ID+ + G + + ++ A + ++ V
Sbjct: 541 RATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKI-FAQVDASSIVPINA 598
Query: 519 LLAASRLHGNTDLAEIAAQRVFQ--LEP 544
L+A + N D A Q+V + L+P
Sbjct: 599 LIAGFVQNNNEDEAIQLFQQVLKDGLKP 626
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 219/475 (46%), Gaps = 53/475 (11%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSIT---SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
Q + +H +LR G SPL SL+ +Y K ++ YA + E +++
Sbjct: 73 QTCRALHGRILRGG---SPLLGRLGDSLVELYCKSGRVGYAWSALG-YAGERASGAASSL 128
Query: 106 ISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+S + L F ++R G PD++ ++ C V + +++H V K G
Sbjct: 129 LSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG 188
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
V+ +ALV+ Y KC + A +VF+ + D + W++M+ Y ++G + +AL +F
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 248
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM K G + T+ ++S L +GR+ H
Sbjct: 249 RMDKMGSAPDQVTLVTIISTLA-----SSGRLDH-------------------------- 277
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
A + + M +WN++++ H Q G L L+ M S G P TF+++L
Sbjct: 278 ----ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 333
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
A +++ A + G+Q+H V++GL N VF+ ++L+++Y KCG DA+ VF
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDAN--------VFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+K++ WN M+ G+ + +EA+ MF M L+ DE TFV +L AC++ G
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
++ + + + + ++ +DM + G + +A L +P + + + W L
Sbjct: 446 KQ-VHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK-DSISWNAL 498
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L+ C+ T G+EIH + ++G + ++LI+MYSKC + + F
Sbjct: 732 ATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKE 791
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L + ++ +N+MI GF N +A + L F M +L + PD+ TF ++ C + E
Sbjct: 792 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 851
Query: 153 VKKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ G V+ L LD Y + ++ + ++EA + ++LP R D V+W
Sbjct: 852 GRHFFGSMRKVYGLTPRLDHY--ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 904
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 329/594 (55%), Gaps = 16/594 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + +L G+++H ++ + ++++MYSK + A +F+ +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+I G N+ + + M+ G+ PD+ +F I C ++ A
Sbjct: 490 PGKDSV-SWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETG 548
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K + + +GS+L++ Y K +E + KV + +V NA++ G Q
Sbjct: 549 KQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQN 608
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK---MGYDSGV 270
+A+E+F+++ K+G S FT +LS G+ VH +K + D+ +
Sbjct: 609 NREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSL 668
Query: 271 PVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +L+ +Y K K + +A ++ E+ + K++ W + ++ + Q G D +L +F RM S
Sbjct: 669 GI--SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRS 726
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+ D TF++VL ACS +AAL G++IHG I+ +G + +ALMDMY
Sbjct: 727 HDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAA--------SALMDMY 778
Query: 390 TKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
+KCG + + +F ++ +K+++ WN MI+G+ +G EAL +F M E++LKPDEVT
Sbjct: 779 SKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTL 838
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL ACSH+G +S+GR M YG+VP ++HY C+ID+LGR G L EA E+ +P
Sbjct: 839 LGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLP 898
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
A+ V+W T LAA ++H + + ++AA+++ ++EP YV +S+++ A G + E
Sbjct: 899 FRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKV 958
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
R MR++ V K PGCSWI + + + F+ D HP+ IY L LT + +
Sbjct: 959 AREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDLTGMMNK 1012
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 259/517 (50%), Gaps = 12/517 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A T +GQ+IH+ ++ G+ + +SLIN+Y K + A VF
Sbjct: 326 TRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 385
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ S E N+ +NAM+ GF ND + + F +MR+ + D +TF ++ C ++ ++
Sbjct: 386 -DFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSL 444
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+++H + K +D D+++ +A+++ Y K ++ A +F +P +D V WNA++ G
Sbjct: 445 DIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGL 504
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A E +A+ + +RM GI + ++A + + G+ +H +K S
Sbjct: 505 AHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNH 564
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID+Y K V + ++ ++ + N+++T Q D + LF ++L
Sbjct: 565 AVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKD 624
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF+P TF+++L C+ + + G+Q+H Y + + L D + +L+ +Y
Sbjct: 625 GFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQ-------DTSLGISLVGIYL 677
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC + DA + ++ K++ W I GY +G ++L MF M ++ DE TF
Sbjct: 678 KCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFA 737
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL ACS L+ G+E L+ + G V + ++DM + G + ++E+ + N
Sbjct: 738 SVLKACSEIAALTDGKEIHGLI-IKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKN 796
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRV--FQLEP 544
+ N + W +++ +G + A + Q++ QL+P
Sbjct: 797 KQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKP 833
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 234/465 (50%), Gaps = 45/465 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L++G+++H +L++G S L++MY+KC ++K A VF+ ++C P+
Sbjct: 167 LSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIAC-PD 225
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +MI+G++ + L F+ M ++G PD+ T+ +I
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTII----------------- 268
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+T + +A + + + + V WNA+++ Y+Q G +
Sbjct: 269 ------------------STLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+++ M ++G+ +R T +LSA M F G+ +H VK G D+ V V ++LI+
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C+ +A ++F+ EK+I WN+++ Q + T+++F M A + D T
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFT 430
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL AC +L +L GRQ+H + N + D+F+ NA++DMY+K G++ A
Sbjct: 431 FVSVLGACINLDSLDIGRQVHCITIKNSMDA--------DLFVANAMLDMYSKLGAIDVA 482
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ + KD SWN +I+G + + +EA+ M M + PDEV+F ++ACS+
Sbjct: 483 KALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNI 542
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
G++ + +Y V + +ID+ + G + + ++
Sbjct: 543 RATETGKQ-IHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 586
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 236/497 (47%), Gaps = 10/497 (2%)
Query: 35 CIASLQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C AS+ H+ Q+ + S M + G ++ ++I+ + ++ A + +
Sbjct: 228 CWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRI 287
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+ +NA+IS + + + + M++ G++P + TF ++ + A E
Sbjct: 288 QM-PSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEG 346
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++IH K GLD +V++GS+L+N Y+K + +A KVF+ +++V+WNAM+ G+ Q
Sbjct: 347 QQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQN 406
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ +++F+ M + + FT VL A I + GR VH I +K D+ + V
Sbjct: 407 DLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVA 466
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA++DMY K + A +F ++ KD SWN+++ + + + RM G
Sbjct: 467 NAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIA 526
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V+F+T + ACS++ A G+QIH + + N + + ++L+D+Y+K G
Sbjct: 527 PDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHA--------VGSSLIDLYSKFG 578
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ ++ V + + N +I G + + EA+++F + + KP TF +LS
Sbjct: 579 DVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILS 638
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
C+ G++ + ++ + + L +A +L +P+ N
Sbjct: 639 GCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNL 698
Query: 514 VVWRTLLAASRLHGNTD 530
V W ++ +G +D
Sbjct: 699 VEWTATISGYAQNGYSD 715
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 215/469 (45%), Gaps = 47/469 (10%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+ +LR G+ +L+++Y + ++ YA + P + + ++
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 114 FAFKG-LDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + LD F +R +G PD++ ++ C + A+ + +++H V K G +
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ LV+ Y KC +++A +VF+ + D + W +M+ GY ++G + +AL +F RM K G
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T ++S L MG + R
Sbjct: 258 APDQVTYVTIISTLASMGRLSDART----------------------------------- 282
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+ + ++ +WN++++ + Q G L+ M G P TF+++L A + + A
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
G+QIH V +GL N VF+ ++L+++Y K G + DA+ VF ++K++
Sbjct: 343 FDEGQQIHAAAVKHGLDAN--------VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 394
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
WN M+ G+ + +E + MF M A L+ D+ TFV VL AC + L GR+ + +
Sbjct: 395 MWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQ-VHCI 453
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ + + ++DM + G ++ A L +P + + V W L+
Sbjct: 454 TIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGK-DSVSWNALI 501
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 16/251 (6%)
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQ 313
V+H V+++G + +AL+D+YG+ VG A + +S+++ H +
Sbjct: 77 VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136
Query: 314 CGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G+ L F R+ S G PD + VL ACS L AL GRQ+H ++ +G +
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C+ L+DMY KC ++DA+ VF ++ D W MI GY G+ ++AL +
Sbjct: 197 CQ--------AGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALAL 248
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
FS M + PD+VT+V ++S + G LS R L ++ +P+ + VI
Sbjct: 249 FSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAVISSYS 303
Query: 493 RAGQLNEAYEL 503
++G +E + L
Sbjct: 304 QSGLESEVFGL 314
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 14/179 (7%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L+ C+ L G+EIH ++++G + + ++L++MYSKC + + +F
Sbjct: 734 ATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKE 793
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L + N+ +N+MI GF N +A + L F M++ + PD+ T ++ C + E
Sbjct: 794 LKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISE 853
Query: 153 -------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ +++G+V + +D Y + L++ + ++EA +V ++LP R D V+W
Sbjct: 854 GRNLFDSMSQVYGIVPR----VDHY--ACLIDLLGRGGHLQEAQEVIDQLPFRADGVIW 906
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 326/597 (54%), Gaps = 16/597 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL--FV 89
+ T + L +CA + + G IH ++ G+ + + +++ MYSKC + A FV
Sbjct: 248 VVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFV 307
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDV 147
NN NV ++N MIS F + + M+ G + ++ T ++ C D
Sbjct: 308 KNN---NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDK 364
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + +K++HG F+ V + +A + Y KC + A KVF + + V WNA++
Sbjct: 365 LQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALI 423
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+AQ G+ KAL + +M+ G FT++ +L A + + G+ +HG V++ G +
Sbjct: 424 GGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLE 483
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V +L+ Y A +F+ M++K++ SWN++++ + Q G +L LF +
Sbjct: 484 TDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKS 543
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
LS G Q + +V ACS L+AL G++ HGY++ +D F+ +++D
Sbjct: 544 LSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVL--------KALQTEDAFVGCSIID 595
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY K G +++++ VF + K+VASWN +I+ +G+ G GKEA++++ M + PD T
Sbjct: 596 MYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFT 655
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
++G+L AC H+G + +G ++ M++ + P +EHY C+IDML RAG+L++A L M
Sbjct: 656 YIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEM 715
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P EA+ +W +LL + R G ++ E A+++ +LEP NYVL+SN+Y GK++ V
Sbjct: 716 PEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVR 775
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M++ ++K+ GCSWIE+ +++F+ D P++ I L R+ E G
Sbjct: 776 RVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIG 832
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/434 (30%), Positives = 224/434 (51%), Gaps = 15/434 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ C +Q +++ G+ +H ++ T + + T LI MY+ C + VF+N+ +
Sbjct: 50 LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK- 108
Query: 98 NVFTYNAMISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ +NA++SG+ N + F + + PD +TFP +IK C ++ V + I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG+V K+GL LDV++G+ALV Y KC ++EA+KVF+ +P ++V WN+M+ +++ G
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 217 HKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ ++ M +EG+ TV +L G G +HG+ VK+G V V NA
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQ 333
++ MY K + EA F K++ SWN++++ G+ + L M G +
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMK 348
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
+ VT VLPAC L +++HGY + C V ++NA + Y KCG
Sbjct: 349 ANEVTILNVLPACLDKLQLRSLKELHGYSFRH-------C--FQHVELSNAFILAYAKCG 399
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
++ A+ VF + K V+SWN +I G+ +G ++AL + M + +PD T +L
Sbjct: 400 ALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLL 459
Query: 454 ACSHSGFLSQGREF 467
AC+H L G+E
Sbjct: 460 ACAHLKSLQYGKEI 473
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 327/595 (54%), Gaps = 15/595 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT + L +CA + + G+ +H + ++ + + +L++MYSKC + A +F
Sbjct: 647 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 706
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMA 149
++ NV ++N M+ GF + D M G V D+ T + C
Sbjct: 707 -MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 765
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +K++H K + + +A V +Y KC + A +VF + + V WNA++ G
Sbjct: 766 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 825
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ + +L+ +M G+ FTV +LSA + + G+ VHG +++ +
Sbjct: 826 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 885
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V +++ +Y + +F+ ME+K + SWN+++T + Q G D L +F +M+
Sbjct: 886 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVL 945
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G Q ++ V ACS L +L GR+ H Y + + L DD F+ +L+DMY
Sbjct: 946 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE--------DDAFIACSLIDMY 997
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K GS+ + VF + +K ASWN MI+GYG+ G KEA+ +F M PD++TF+
Sbjct: 998 AKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFL 1057
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE-LALAMP 508
GVL+AC+HSG + +G +L M+S +G+ P ++HY CVIDMLGRAGQL++A +A M
Sbjct: 1058 GVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMS 1117
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
EA+ +W++LL++ R+H N ++ E A ++F+LEP NYVL+SN+Y GK+E+V
Sbjct: 1118 EEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRK 1177
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR---SHPEAKSIYAELHSLTARL 620
+R M + ++RK+ GCSWIEL + +F+ +R E KS+++ L +++
Sbjct: 1178 VRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKM 1232
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 249/502 (49%), Gaps = 19/502 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQ + +++ G++IH + T + + + T +I MY+ C + FVF+ L +
Sbjct: 446 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK- 504
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+F +NA+IS + N+ + L+ F M +LPD +T+PC+IK C + V +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGLV K GL DV++G+ALV+ Y F+ +AL++F+ +P R++V WN+M+ ++ G
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 217 HKALEVFRRMSKE---GIWMSRF-TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
++ + M +E G +M T+ VL G+ VHG VK+ D + +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG- 331
NAL+DMY K C+ A IF+M K++ SWN+++ G+ GT + +ML+ G
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 332 -FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D VT +P C H + L +++H Y + N + NA + Y
Sbjct: 745 DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE--------LVANAFVASYA 796
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCGS+ AQ VF + K V SWN +I G+ + +LD M + L PD T
Sbjct: 797 KCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 856
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+LSACS L G+E + R + + Y V+ + G+L L AM ++
Sbjct: 857 LLSACSKLKSLRLGKEVHGFI-IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 915
Query: 511 ANPVVWRTLLAASRLHGNTDLA 532
+ V W T++ +G D A
Sbjct: 916 S-LVSWNTVITGYLQNGFPDRA 936
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 324/577 (56%), Gaps = 10/577 (1%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ +++ ++ +G+ + IN + YA F +S EP++ +NA+I
Sbjct: 15 LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVS-EPDILLWNAIIK 73
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ + + + M+ V P+ +TF ++K C K+IHG FK G
Sbjct: 74 GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGS 133
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+V++ ++LV+ Y K + A VF++L R VV W ++++GY Q G+ +AL VF+ M
Sbjct: 134 NVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMR 193
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ + + V++A + G+ +HG+V K+G + ++ +L MY K V
Sbjct: 194 QCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVE 253
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A F ME+ ++ WN++++ + G + ++LF M++ + D +T + + A +
Sbjct: 254 VARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASA 313
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+ +L R + GYI + DD F+N L+DMY KCGS+ A+ VF +++
Sbjct: 314 QVGSLELARWLDGYI--------SKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVAD 365
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KDV W++MI+GYG+ G G+EA+ +++ M +A + P++ TF+G+L+AC +SG + +G E
Sbjct: 366 KDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWEL 425
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
LM +G+ P +HY+CV+D+LGRAG LN+AY+ ++MP + VW LL+A ++H
Sbjct: 426 FHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHR 484
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
L EIAA+++F L+P + G+YV +SN+Y + + V ++R M Q+ + K+ G S I
Sbjct: 485 KVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSI 544
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ L TF DRSHP++K I+ EL L RL+ G
Sbjct: 545 EINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAG 581
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 15/399 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L+ C + G++IH + G + SL++MY+K Q+ YA VF+ L
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V ++ ++ISG+ N + L+ F MRQ V PD ++ +V + +
Sbjct: 162 H-DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQG 220
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IHGLV KLGL+ + I +L Y K +E A F + +++LWNAM++GYA
Sbjct: 221 KSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANN 280
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A+++FR M + I + T+ + A +G + R + G + K Y V
Sbjct: 281 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 340
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
LIDMY K + A +F+ + +KD+ W+ ++ + G+ + L++ M AG
Sbjct: 341 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 400
Query: 334 PDLVTFSTVLPACSHLAALMHGRQI--------------HGYIVVNGLAKNGSCKDIDDV 379
P+ TF +L AC + + G ++ H VV+ L + G D
Sbjct: 401 PNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDF 460
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
M+ + + G++ A + K+ ++A+ + IL
Sbjct: 461 IMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFIL 499
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/573 (32%), Positives = 320/573 (55%), Gaps = 13/573 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYAL 87
P +A+ ++ + C + G +H +L+TG+ DS +++ +L++MY K ++ ++
Sbjct: 174 PVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGL-DSIVNLGNALVDMYGKFGHVEASM 232
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF + E N ++N+ I F + L F M + G +P T L+ ++
Sbjct: 233 KVFEGMP-ERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVEL 291
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+++HG K ++LD+++ ++LV+ Y K +E+A VFE++ +R+VV WNAM+
Sbjct: 292 GYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMI 351
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
Q G +A + +M K+G + T+ +L A M K G+ +H ++ G
Sbjct: 352 ANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLM 411
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ + NALIDMY K + A IF++ E+ D+ S+N+++ + Q +L LF ++
Sbjct: 412 FDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDV-SYNTLILGYSQSPWSFESLNLFKQL 470
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
S G + D ++F L AC++L++ G++IHG +V L+ + F+ N L+
Sbjct: 471 SSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNH--------PFLANTLLG 522
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+YTK G + A +F ++ +KDVASWN MI+GYGM GQ A +F M + + D V+
Sbjct: 523 LYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVS 582
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
++ VLS CSH G + +G+++ M ++ + P HY C++D+LGR+GQL E+ E+ L M
Sbjct: 583 YIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLTESVEIILDM 641
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P AN VW LL A R+HGN +LA+ AA +F+L+P H G Y ++ N+Y G++ E
Sbjct: 642 PFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAH 701
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
IR M+ + V+KNP SW++ + L F+ D
Sbjct: 702 KIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVGD 734
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 265/519 (51%), Gaps = 36/519 (6%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
KG E+H+ LR+G + + +L+ Y+ C A VF+ + +V ++N+++S F
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPAR-DVVSWNSLVSSF 152
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-------IHGLVFK 162
+N F+ RQ + + P + V+ V++ +HGLV K
Sbjct: 153 LANKM-------FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLK 205
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
GLD V +G+ALV+ Y K +E ++KVFE +P R+ V WN+ + + G + L +
Sbjct: 206 TGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLAL 265
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
FR MS+ G T++ +L AL+ +G+F GR VHG +K + + V N+L+DMY K
Sbjct: 266 FRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAK 325
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ +A +FE +E +++ SWN+++ Q G L +M G P+ +T +
Sbjct: 326 FGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNL 385
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
LPACS +A+L G+QIH + + GL + D+F++NAL+DMY KCG +R AQ +F
Sbjct: 386 LPACSRMASLKTGKQIHAWSIRTGL--------MFDLFISNALIDMYAKCGQLRLAQSIF 437
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+S+KD S+N +ILGY E+L++F + ++ D ++F+G L+AC++
Sbjct: 438 -DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFK 496
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLG---RAGQLNEAYELALAMPNEANPVVWRTL 519
QG+E ++ R H +LG + G L+ A ++ E + W +
Sbjct: 497 QGKEIHGVLVRRL----LSNHPFLANTLLGLYTKGGMLDTASKI-FNRIKEKDVASWNNM 551
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+ +HG D AA +F L H Y +S I V
Sbjct: 552 IMGYGMHGQID----AAFHLFDLMKDHGVTYDHVSYIAV 586
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 194/386 (50%), Gaps = 11/386 (2%)
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK--KIHGLVFKLGLDLDVYIGSA 174
+ L +NHM + GV PD TFP + K ++H + G DV+ G+
Sbjct: 57 EALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNT 116
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
LV Y C +A +VF+E+P RDVV WN++V+ + F A + M + G+ ++
Sbjct: 117 LVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVN 176
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
++ V+ A + G VHG+V+K G DS V + NAL+DMYGK V ++++FE
Sbjct: 177 VASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFE 236
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M E++ SWNS + G + L LF M GF P +T S++LPA L
Sbjct: 237 GMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDL 296
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
GR++HGY + + D+F+ N+L+DMY K GS+ A VF K+ ++V SWN
Sbjct: 297 GREVHGYSIKRAMEL--------DIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWN 348
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI +G EA + M + P+ +T V +L ACS L G++ + R
Sbjct: 349 AMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQ-IHAWSIR 407
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEA 500
G++ + +IDM + GQL A
Sbjct: 408 TGLMFDLFISNALIDMYAKCGQLRLA 433
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 16/227 (7%)
Query: 299 KDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT--FSTVLPACSHLAALMHGR 356
+ F WNS+ L +++ ML +G PD T F+ A + A G
Sbjct: 37 RSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGL 96
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
++H + +G + DVF N L+ Y CG DA+ VF +M +DV SWN +
Sbjct: 97 ELHAAALRSG--------HLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSL 148
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC--SHSGFLSQGREFLPLMESR 474
+ + + +A M + + + + V V+ AC G G L L +
Sbjct: 149 VSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVL---K 205
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G+ + ++DM G+ G + + ++ MP E N V W + +
Sbjct: 206 TGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMP-ERNEVSWNSAIG 251
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 180/592 (30%), Positives = 328/592 (55%), Gaps = 22/592 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
C+ +++ G+ +H+ ++ G+ + S+ +MY++C +M A VF+ E + +
Sbjct: 112 CSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAE-ERDDVS 170
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC---------DVMAVLE 152
+NA++SG+ + L+ F+ M + G+ + + +IKCC DV
Sbjct: 171 WNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRI 230
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ +HG V K GLD D+++ SA+++ Y K + A+ +F+ +P +V++ NAM+ G+ +
Sbjct: 231 AEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCR 290
Query: 213 ---IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AL ++ + G+ S F+ + +L A + G F G+ +HG V+K +
Sbjct: 291 EEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGD 350
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + +ALID+Y C+ + F + ++D+ W S+++ Q + LRLF +
Sbjct: 351 VYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVR 410
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD+ S+V+ AC+ LA G QI V +G + + M N+ + M
Sbjct: 411 CGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTA--------MGNSFIHMC 462
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP-DEVTF 448
+ G + A F +M +DV SW+ +I + G ++AL +F+ M +AK+ P +E+TF
Sbjct: 463 ARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITF 522
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ +L+ACSH G + +G + +M YG+ PTI+H TCV+D+LGRAG+L +A
Sbjct: 523 LSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSA 582
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ VVWR+LLA+ R+HG+ + ++ A ++ LEP +YV++ N+Y+ G+
Sbjct: 583 FHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASK 642
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
R M+++ V+K PG SWIEL G+H+F++ D+SHPE+K+IY ++ + +++
Sbjct: 643 TRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAEMVSKV 694
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 203/442 (45%), Gaps = 22/442 (4%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N +YN +I + L F R + D++T+ + C + V K +H
Sbjct: 66 NAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAVH 125
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+V GL +++ +++ + Y +C M EA +VF+ RD V WNA+++GY + G
Sbjct: 126 AMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGARE 185
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLS------ALIMMGFFKNGRV---VHGIVVKMGYDS 268
+ LEVF M + G+ + F + ++ + G GR+ VHG VVK G D+
Sbjct: 186 ETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDA 245
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFD 325
+ + +A+IDMY K + A+ +F+ + + ++ N+++ E L L+
Sbjct: 246 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAREALGLYS 305
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ S G QP +FS++L AC+ G+QIHG ++ + DV++ +AL
Sbjct: 306 ELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQ--------GDVYIGSAL 357
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+D+Y+ G M D F + K+DV W +I G + +EAL +F L+PD
Sbjct: 358 IDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDV 417
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
V++AC+ G E + + + G I M R+G ++ A
Sbjct: 418 FAMSSVMNACASLAVARTG-EQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQ 476
Query: 506 AMPNEANPVVWRTLLAASRLHG 527
M + + V W ++++ HG
Sbjct: 477 EMESR-DVVSWSAVISSHAHHG 497
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 203/425 (47%), Gaps = 36/425 (8%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME--EALKVFEELPL 197
L++ C A+ V +H + + + +++ + L+ +Y + A ++ +E+P
Sbjct: 8 LLRSCA---ALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDEMPR 64
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
R+ V +N ++ Y++ G +L F R + RFT L+A + G+ V
Sbjct: 65 RNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTGKAV 124
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H +VV G +G+ + N++ MY + +GEA +F+ EE+D SWN++++ + + G
Sbjct: 125 HAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAR 184
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH------GR---QIHGYIVVNGLA 368
+ TL +F M G + +++ C+ ++ GR +HG +V GL
Sbjct: 185 EETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKAGLD 244
Query: 369 KNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ--- 425
D+F+ +A++DMY K G++ +A +F + +V N MI G+ +
Sbjct: 245 A--------DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADV 296
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF--LPLMESRYGVVPTIEH 483
+EAL ++S + ++P E +F +L AC+ +G G++ L S G V
Sbjct: 297 AREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYI--- 353
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
+ +ID+ +G + + Y ++P + + V+W ++++ +L E A R+FQ E
Sbjct: 354 GSALIDLYSGSGCMEDGYRCFRSLPKQ-DVVIWTSVISGCV---QNELFE-EALRLFQ-E 407
Query: 544 PGHCG 548
CG
Sbjct: 408 SVRCG 412
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 329/596 (55%), Gaps = 14/596 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + ++ G+++H ++ + S + ++MYSK + A +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ ++NA+ G N + + MR G+ PD +F I C ++ A
Sbjct: 488 PYKDSI-SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 546
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L K G+ + +GS+L++ Y K +E + K+F ++ +V NA++ G+ Q
Sbjct: 547 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 606
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--YDSGVP 271
+A+++F+++ K+G+ S T + +LS G+ VH +K G YD +
Sbjct: 607 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL- 665
Query: 272 VMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ +L +Y K K + +A ++ EM + K++F W +I++ + Q G D +L F RM
Sbjct: 666 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 725
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D TF++VL ACS + A G++IHG I +G + +AL+DMY+
Sbjct: 726 NVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA--------TSALIDMYS 777
Query: 391 KCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + + F ++ +K+D+ WN MI+G+ +G EAL +F M E ++KPDEVTF+
Sbjct: 778 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 837
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC+HSG +S+GR F M YG+ P ++HY C ID+LGR G L EA E +P
Sbjct: 838 GVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 897
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ VVW T LAA R+H + + +IAA+++ +LEP + YVL+S+++ A G + E
Sbjct: 898 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 957
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
R +MR++ V K PGCSWI + + F+ D+ HP+ IY L LT +++ D
Sbjct: 958 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDND 1013
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 262/515 (50%), Gaps = 12/515 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A+ +GQ++H+ + G+ + +SLIN+Y+KC A VF
Sbjct: 324 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 383
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+LSCE N+ +NAM++GF N+ + + F +M + + D++TF ++ C + +
Sbjct: 384 -DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 442
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K++H + K +D+ +++ +A ++ Y K + +A +F +P +D + WNA+ G
Sbjct: 443 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 502
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ E +A+ + +RM GI + + ++A + + G+ +H + +K G S
Sbjct: 503 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 562
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID+Y K V + +IF ++ I N+++ Q N D ++LF ++L
Sbjct: 563 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 622
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P VTFS++L CS G+Q+H Y + +G+ DD + +L +Y
Sbjct: 623 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVL-------YDDTLLGVSLAGIYL 675
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K + DA + T+M K++ W +I GY +G G +L F M ++ DE TF
Sbjct: 676 KSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFA 735
Query: 450 GVLSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL ACS + G+E L+ +S +G T + +IDM + G + ++E +
Sbjct: 736 SVLKACSDVTAFADGKEIHGLITKSGFGSYETAT--SALIDMYSKCGDVISSFEAFKELK 793
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
N+ + + W +++ +G D A + Q++ +L+
Sbjct: 794 NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 828
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 253/509 (49%), Gaps = 16/509 (3%)
Query: 35 CIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C +S+ C H+ Q+ + S M + G +++ ++I+ + ++ +A + +
Sbjct: 226 CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+ +NA+ISG + F L + MR G+ P + TF ++ ++ A +E
Sbjct: 286 P-TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 344
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H GLD +V++GS+L+N Y KC +A VF+ +++V+WNAM+ G+ Q
Sbjct: 345 QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN 404
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+A+ +F+ M + + FT +L A + F G+ VH + +K D + V
Sbjct: 405 ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVA 464
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA +DMY K +G+A +F ++ KD SWN++ Q + + + RM G
Sbjct: 465 NATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGIT 524
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V+FST + ACS++ A G+QIH + G+ N + + ++L+D+Y+K G
Sbjct: 525 PDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA--------VGSSLIDLYSKHG 576
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ ++ +F ++ + N +I G+ + EA+ +F + + LKP VTF +LS
Sbjct: 577 DVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILS 636
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG---RAGQLNEAYELALAMPNE 510
CS S + G++ + + GV+ + + + G ++ L +A +L MP+
Sbjct: 637 GCSGSLNSAIGKQ-VHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
N W +++ +G D + ++ R+
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRM 722
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 251/508 (49%), Gaps = 48/508 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L G+++H ++++G S +L++MY+KC + A VF+ ++C P+
Sbjct: 165 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PD 223
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++MI+ ++ + L F+ M ++G PD+ T +I
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTII----------------- 266
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+T ++ A + +++P V WNA+++G+AQ G
Sbjct: 267 ------------------STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 308
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +++ M G+W +R T +LSA M F G+ +H V G D+ V V ++LI+
Sbjct: 309 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 368
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C +A +F++ EK+I WN+++T Q + +R+F M+ Q D T
Sbjct: 369 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 428
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC++L++ G+Q+H + N C DI +F+ NA +DMY+K G++ DA
Sbjct: 429 FVSILGACTYLSSFYLGKQVHCVTIKN-------CMDI-SLFVANATLDMYSKYGAIGDA 480
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ + KD SWN + +G + + +EA+ M M + PD+V+F ++ACS+
Sbjct: 481 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G++ + + +YG+ + +ID+ + G + + ++ A + ++ V
Sbjct: 541 RATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKI-FAQVDASSIVPINA 598
Query: 519 LLAASRLHGNTDLAEIAAQRVFQ--LEP 544
L+A + N D A Q+V + L+P
Sbjct: 599 LIAGFVQNNNEDEAIQLFQQVLKDGLKP 626
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 219/475 (46%), Gaps = 53/475 (11%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSIT---SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
Q + +H +LR G SPL SL+ +Y K ++ YA + E +++
Sbjct: 73 QTCRALHGRILRGG---SPLLGRLGDSLVELYCKSGRVGYAWSALG-YAGERASGAASSL 128
Query: 106 ISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+S + L F ++R G PD++ ++ C V + +++H V K G
Sbjct: 129 LSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG 188
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
V+ +ALV+ Y KC + A +VF+ + D + W++M+ Y ++G + +AL +F
Sbjct: 189 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 248
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM K G + T+ ++S L +GR+ H
Sbjct: 249 RMDKMGSAPDQVTLVTIISTLA-----SSGRLDH-------------------------- 277
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
A + + M +WN++++ H Q G L L+ M S G P TF+++L
Sbjct: 278 ----ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 333
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
A +++ A + G+Q+H V++GL N VF+ ++L+++Y KCG DA+ VF
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDAN--------VFVGSSLINLYAKCGCPSDAKNVFDL 385
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+K++ WN M+ G+ + +EA+ MF M L+ DE TFV +L AC++ G
Sbjct: 386 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 445
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
++ + + + + ++ +DM + G + +A L +P + + + W L
Sbjct: 446 KQ-VHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK-DSISWNAL 498
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L+ C+ T G+EIH + ++G + ++LI+MYSKC + + F
Sbjct: 732 ATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKE 791
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L + ++ +N+MI GF N +A + L F M +L + PD+ TF ++ C + E
Sbjct: 792 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 851
Query: 153 VKKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ G V+ L LD Y + ++ + ++EA + ++LP R D V+W
Sbjct: 852 GRHFFGPMRKVYGLTPRLDHY--ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 904
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 333/596 (55%), Gaps = 16/596 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + +L G+++H ++ G+ ++++MYSK + A +F+ +
Sbjct: 427 TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI 486
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V ++NA+I G N+ + ++ M+ G+ D+ +F I C ++ A+
Sbjct: 487 PVKDSV-SWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETG 545
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH K + + +GS+L++ Y K +E + KV + +V NA++ G Q
Sbjct: 546 KQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQN 605
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK---MGYDSGV 270
+A+E+F+++ K+G S FT T +LS G+ VH +K + D+ +
Sbjct: 606 NREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSL 665
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMM-EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +L+ +Y K K + +A ++ E + + K++ W + ++ + Q G +L +F RM S
Sbjct: 666 GI--SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRS 723
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+ D TF++VL ACS +AAL G++IHG IV +G + +ALMDMY
Sbjct: 724 YDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETA--------TSALMDMY 775
Query: 390 TKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
+KCG + + +F ++ +++++ WN MI+G+ +G EAL +F M E+++KPD+VT
Sbjct: 776 SKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTL 835
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL ACSH+G +S+G F M YG+VP ++HY C+ID+LGR G L +A E+ +P
Sbjct: 836 LGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLP 895
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
A+ V+W T LAA ++H + + ++AA+++ ++EP YV +S+++ A G + E
Sbjct: 896 FRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKV 955
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R MR++ V K PGCSWI + + F+ D HP+A SIY L LT + + G
Sbjct: 956 AREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDG 1011
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/517 (25%), Positives = 262/517 (50%), Gaps = 12/517 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A+ T +G++IH+ ++ G+ + +SLIN+Y K + A VF
Sbjct: 323 TRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVF 382
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ S E N+ +NA++ GF N+ + + F +MR+ + D +TF ++ C ++ ++
Sbjct: 383 D-FSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSL 441
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+++H + K G+D D+++ +A+++ Y K ++ A +F +P++D V WNA++ G
Sbjct: 442 DLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGL 501
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
A E +A+ + +RM GI + + ++A + + G+ +H +K S
Sbjct: 502 AHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNH 561
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID+Y K V + ++ ++ I N+++T Q D + LF ++L
Sbjct: 562 AVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKD 621
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
GF+P TF+++L C+ + + G+Q+H Y + + + D + +L+ +Y
Sbjct: 622 GFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQ-------DTSLGISLVGIYL 674
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KC + DA + ++ K++ W I GY +G ++L MF M ++ DE TF
Sbjct: 675 KCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFT 734
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VL ACS L+ G+E L+ + G V + ++DM + G + ++E+ + N
Sbjct: 735 SVLKACSEMAALTDGKEIHGLI-VKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKN 793
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRV--FQLEP 544
N + W +++ +G + A + Q++ Q++P
Sbjct: 794 RQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKP 830
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 236/465 (50%), Gaps = 45/465 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L+ G+++H +L++G S L++MY+KC ++ A +F+ ++C P+
Sbjct: 164 LSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIAC-PD 222
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ +MI+G++ + L F+ M ++G +PD+ T C +++ L
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVT-------CVTIISTL------A 269
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ +LG +A + + + + V WNA++ Y+Q G +
Sbjct: 270 SMGRLG----------------------DARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
+++ M K+G+ +R T +LSA M F GR +H VK G D+ V V ++LI+
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C+ +A ++F+ EK+I WN+I+ Q + T+++F M A + D T
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL AC +L +L GRQ+H + NG+ D+F+ NA++DMY+K G++ A
Sbjct: 428 FVSVLGACINLYSLDLGRQVHCITIKNGMDA--------DLFVANAMLDMYSKLGAIDVA 479
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ + KD SWN +I+G + + EA++M M + DEV+F ++ACS+
Sbjct: 480 KALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNI 539
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ G++ + +Y V + +ID+ + G + + ++
Sbjct: 540 WAIETGKQ-IHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 583
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 206/408 (50%), Gaps = 9/408 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
Q+ + S M + G + ++ ++I+ + ++ A + + V +NA+I+
Sbjct: 240 QQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTV-AWNAVIAS 298
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
+ + + + M++ G++P + TF ++ ++ A E ++IH K GLD +
Sbjct: 299 YSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDAN 358
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
V++GS+L+N Y+K + +A KVF+ +++V+WNA++ G+ Q + +++F+ M +
Sbjct: 359 VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRR 418
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
+ FT VL A I + GR VH I +K G D+ + V NA++DMY K +
Sbjct: 419 ADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDV 478
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F ++ KD SWN+++ + + RM G D V+F+T + ACS+
Sbjct: 479 AKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSN 538
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
+ A+ G+QIH + + N + + ++L+D+Y+K G + ++ V +
Sbjct: 539 IWAIETGKQIHSASIKYNVCSNHA--------VGSSLIDLYSKFGDVESSRKVLAHVDAS 590
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+ N +I G + + EA+++F + + KP TF +LS C+
Sbjct: 591 SIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCT 638
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 217/469 (46%), Gaps = 47/469 (10%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+H+ +LR G+ +L+++Y + ++ YA + P + + ++
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 114 FAFKG-LDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + LD F +R +G PD++ ++ C + A+ +++H V K G V+
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ LV+ Y KC +++A ++F+ + D + W +M+ GY ++G + +AL +F RM K G
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ T ++S L MG +G+A
Sbjct: 255 VPDQVTCVTIISTLASMGR-----------------------------------LGDART 279
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+ + + +WN+++ + Q G L+ M G P TF+++L A +++ A
Sbjct: 280 LLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
GRQIH V +GL N VF+ ++L+++Y K G + DA+ VF ++K++
Sbjct: 340 FDEGRQIHATAVKHGLDAN--------VFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 391
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
WN ++ G+ + +E + MF M A L+ D+ TFV VL AC + L GR+ + +
Sbjct: 392 MWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQ-VHCI 450
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G+ + ++DM + G ++ A L +P + + V W L+
Sbjct: 451 TIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DSVSWNALI 498
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE--MMEEKDIFSWNSIMTVHEQ 313
V+H ++++G + +AL+D+YG+ VG A + +S+++ H +
Sbjct: 74 VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133
Query: 314 CGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G+ L F R+ S G PD + VL ACS L AL HGRQ+H ++ K+G
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVL-----KSGF 188
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C VF L+DMY KCG + DA+ +F ++ D W MI GY G+ ++AL +
Sbjct: 189 CS---SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALAL 245
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
FS M + PD+VT V ++S + G L R L R + T+ + VI
Sbjct: 246 FSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLL----KRIRMTSTVA-WNAVIASYS 300
Query: 493 RAGQLNEAYELALAMPNE 510
++G +E + L M +
Sbjct: 301 QSGLDSEVFGLYKDMKKQ 318
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 18/209 (8%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L+ C+ L G+EIH ++++G + + ++L++MYSKC + + +F
Sbjct: 731 ATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKE 790
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L N+ +N+MI GF N +A + L F M++ + PD T ++ C + E
Sbjct: 791 LKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISE 850
Query: 153 -------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
+ +++G+V + +D Y + L++ + +++A +V ++LP R D V+W
Sbjct: 851 GLHFFDSMSQVYGIVPR----VDHY--ACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWA 904
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
Y + HK E + +K+ + M
Sbjct: 905 T----YLAACQMHKDEERGKVAAKKLVEM 929
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 320/595 (53%), Gaps = 14/595 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+++ + + C +++G +H + + GI + L++MY K +++ A V
Sbjct: 223 FTMSSVLLA---CGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ ++ + +V T+N MI G+ + F M G +PD + I+ C
Sbjct: 280 FSKMAVKDSV-TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K +H + G + D + L++ Y KC + A +VF+ +D V WN+++NG
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y Q G + + LE F+ M E S T +LS + GR +H V+K G+++
Sbjct: 398 YTQSGYYKEGLESFKMMKMERKPDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAE 456
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + N+L+D+Y K + + L++F M DI SWN+++ + ++ + M +
Sbjct: 457 LIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G PD T +LP CS LA G++IHGYI +G N V + NAL++MY
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESN--------VPIGNALIEMY 568
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCGS+ + VF M +KDV +W +I +GM G+GK+AL F M + + PD V F+
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ ACSHSG + +G F M++ Y + P +EHY CV+D+L R+G L +A E L+MP
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPM 688
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + +W LL+A R GNT++A+ ++++ +L G YVL+SNIY GK+++V +
Sbjct: 689 KPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTV 748
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R++M+ + ++K PG SWIE++ ++ F + D+S + + L L + + G
Sbjct: 749 RNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEG 803
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 268/517 (51%), Gaps = 20/517 (3%)
Query: 8 INPFSSCFNFS-TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
+ P C NF+ T +Q F L T + N + + +HS ++ +G+ S
Sbjct: 1 MKPPKFCSNFNNTPEPSQEFLRSSLLKTL-------SSAKNTPQLRTVHSLIITSGLSLS 53
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
+ LI+ Y++ ++ VF ++S NV+ +N++I N + L ++ MR
Sbjct: 54 VIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMR 113
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ + PD +TFP +I C ++ + +H ++G + D+YIG+AL++ Y + ++
Sbjct: 114 EKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLD 173
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A VFEE+ RD V WN++++GY G + AL+++ + G+ FT++ VL A
Sbjct: 174 NARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACG 233
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ K G VHG++ K+G V + N L+ MY K + + EA +F M KD +WN+
Sbjct: 234 SLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNT 293
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + Q G H+ +++LF M+ GF PD+++ ++ + AC L G+ +H Y++ +G
Sbjct: 294 MICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
C D N L+DMY KCG + AQ VF KD +WN +I GY G
Sbjct: 353 F----EC----DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY 404
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
KE L+ F M + + KPD VTFV +LS S ++QGR + ++G +
Sbjct: 405 KEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQGRG-IHCDVIKFGFEAELIIGNS 462
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++D+ + G++++ ++ M + + + W T++A+S
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYM-SAHDIISWNTVIASS 498
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 312/601 (51%), Gaps = 89/601 (14%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
MR++G L D +TFP +I+ C + + + K IHG V ++G +++G+ L+ Y K
Sbjct: 33 MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI------WMSRFT- 237
M +A +F+ + +R + WN MV+ YA + + ALE+F+RM EG+ W S +
Sbjct: 93 MRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISS 152
Query: 238 -----------------------VTGVLSALIM-----MGFFKNGRVVHGIVVKMGYDSG 269
V+G A+++ +G F +++H VK G++
Sbjct: 153 YARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEY 212
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +ALI +YGK V A +F M+ K + SWN+++T H + G D L +F ++
Sbjct: 213 SFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLER 272
Query: 330 AGFQPDL---------------------------------------VTFSTVLPACSHLA 350
+G P L VT STVL C+ LA
Sbjct: 273 SGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELA 332
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL GR+IHG++V + ++++ + N L++MY KCG +++ M+F K +KD+
Sbjct: 333 ALHLGREIHGHVVRAVM--------VNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDL 384
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI GYGM G G AL+ F M + KPD VTFV VLS+CSHSG + +GR
Sbjct: 385 ISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQ 444
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +Y + P +EHY C++D+LGRAG L EA E+ MP N VW LL + R+H NT+
Sbjct: 445 MLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTE 504
Query: 531 LAEIAAQRVFQLEPGH-CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
+AE A +F L G Y+L+SNIY A G++E+ +R + + + ++KNPG SWI++
Sbjct: 505 IAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKV 564
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASG-FEKHRLYL 648
+ ++TF + + + I+ L LT ++ GT+ D+D T +++ RL +
Sbjct: 565 EKNVYTFSAGNNMQRGFEQIFEILEELTFQMERE-----GTVHDTDITPQAVYQETRLTM 619
Query: 649 E 649
Sbjct: 620 R 620
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 171/407 (42%), Gaps = 76/407 (18%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
T FT I + CA+ + G+ IH ++L G LI MY+K +M+
Sbjct: 38 TLGDGFTFPLVI---RACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMR 94
Query: 85 YALFVFNNLSC----------------------------------EPNVFTYNAMISGFY 110
A +F+ +S EPN+ T+ ++IS +
Sbjct: 95 DARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYA 154
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + + ++ F MR GV +I C D+ A + K IH K G + +
Sbjct: 155 RSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSF 214
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN---------------------- 208
+ SAL+ Y K + A +F E+ + + WNA++
Sbjct: 215 VKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSG 274
Query: 209 -----------------GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFF 251
G+A G +ALE+FRRM I + T++ VLS +
Sbjct: 275 DCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAAL 334
Query: 252 KNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
GR +HG VV+ + + V N L++MY K C+ E IFE E KD+ SWNS++T +
Sbjct: 335 HLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGY 394
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
G L FD+M+ GF+PD VTF VL +CSH + GR++
Sbjct: 395 GMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRL 441
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 68/370 (18%)
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
RRM K G FT V+ A MG F G+ +HG V++MG+ S + V N LI MY K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST-- 341
+ +A +F+ M + SWN++++ + + +G L +F RM S G +P+LVT+++
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 342 ---------------------------------VLPACSHLAALMHGRQIHGYIVVNGL- 367
V+ C+ L A + + IH Y V G
Sbjct: 151 SSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFE 210
Query: 368 -------------AKNGSCKDIDDVFMN---------NALMDMYTKCGSMRDAQMVFTKM 405
K+G ++F+ NAL+ + + G +A +F+++
Sbjct: 211 EYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQL 270
Query: 406 SKK--------DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
+ +V SW+ +I G+ G+ KEAL++F M AK+ + VT VLS C+
Sbjct: 271 ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAE 330
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L GRE + R +V I +++M + G L E + + + + W
Sbjct: 331 LAALHLGREIHGHV-VRAVMVNNILVGNGLVNMYAKCGCLKEGH-MIFEKTERKDLISWN 388
Query: 518 TLLAASRLHG 527
+++ +HG
Sbjct: 389 SMITGYGMHG 398
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 13/237 (5%)
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G+ D L I S + C +++ PNV +++A+I GF S + L+
Sbjct: 257 AGLCDEALEIFSQLERSGDCPRLR------------PNVVSWSAIIDGFASKGREKEALE 304
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
F M+ +L + T ++ C ++ A+ ++IHG V + + ++ +G+ LVN Y
Sbjct: 305 LFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYA 364
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
KC ++E +FE+ +D++ WN+M+ GY G ALE F +M K G T
Sbjct: 365 KCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVA 424
Query: 241 VLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
VLS+ G G R+ ++ K + + ++D+ G+ + EA EI + M
Sbjct: 425 VLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNM 481
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 54/298 (18%)
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
RM G D TF V+ AC+++ + + G+ IHG+++ G + + + N L
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSH--------LHVGNEL 83
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G MRDA+ +F +MS + SWN M+ Y + AL++F M ++P+
Sbjct: 84 IGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNL 143
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESR------------------------------Y 475
VT+ ++S+ + SG+ + E LM + Y
Sbjct: 144 VTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEY 203
Query: 476 GVVPTIEHYTCVIDML----GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
V E Y+ V L G+ G +N A+ L L M N++ W L+ + H L
Sbjct: 204 AVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKS-LASWNALITS---HAEAGL 259
Query: 532 AEIAAQRVFQLE-PGHC----GNYVLMSNI---YVAGGKYEEVLDIRHTMRQQNVRKN 581
+ A + QLE G C N V S I + + G+ +E L++ M+ + N
Sbjct: 260 CDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILAN 317
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 90/172 (52%), Gaps = 3/172 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L LCA L G+EIH +++R ++++ L L+NMY+KC +K +F +
Sbjct: 325 LSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTE-RKD 383
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI-H 157
+ ++N+MI+G+ + L+ F+ M +LG PD TF ++ C V E +++
Sbjct: 384 LISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFD 443
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
++ K ++ + + +V+ + + EA ++ + +P+ + +W A++N
Sbjct: 444 QMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLN 495
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/595 (31%), Positives = 317/595 (53%), Gaps = 10/595 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +N+ G+ +H+Y ++T ++ S +SL++MY + +++ + VF+ + N
Sbjct: 109 LKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFR-N 167
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ A+I+G +GL +F+ M L D +TF +K C + V K+IH
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V G D V++ ++L Y +C M + L +FE + RDVV W +++ Y +IG K
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E F +M + + T + SA + G +H V +G + + V N+++
Sbjct: 288 AVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMK 347
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY + A +F+ M +DI SW++I+ + Q G + + F M +G +P
Sbjct: 348 MYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFA 407
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+++L ++A L GRQ+H GL +N + + + L++MY+KCG++++A
Sbjct: 408 LASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVR--------STLINMYSKCGNIKEA 459
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F + + D+ S MI GY G+ KEA+D+F + PD VTF+ VL+AC+HS
Sbjct: 460 SKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHS 519
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L G + LM+ +Y + P EHY C++D+L RAG+L+EA ++ M + + VVW T
Sbjct: 520 GQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTT 579
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A + G+ + AA+R+ +L+P V ++NIY + G EE ++R M+ + V
Sbjct: 580 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 639
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG-DCCAGTLF 632
K PG S I++KD + F+S DR HP ++ IY L + + H DC +F
Sbjct: 640 IKEPGWSSIKIKDCVSAFVSGDRFHPLSEDIYNILELVVSGAEAHRFDCTIKRVF 694
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 220/441 (49%), Gaps = 16/441 (3%)
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
D+ + SLIN ++ A VF+ + ++ ++ A+I G+ + + + + + F+
Sbjct: 36 DTNSHLRSLIN----AGNLRVARQVFDKMP-HRDIVSWTAIIKGYVTANNSDEAMILFSA 90
Query: 125 MRQL--GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
MR + V PD ++K C + + +H K L V++GS+L++ Y +
Sbjct: 91 MRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRV 150
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+E++ +VF E+P R+ V W A++ G G + + L F MS FT L
Sbjct: 151 GKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIAL 210
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A + K G+ +H V+ G+D+ V V N+L MY + + + L +FE M E+D+
Sbjct: 211 KACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVV 270
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
SW S++ + + G+ + + F +M ++ P+ TF+T+ AC+ L+ L+ G Q+H +
Sbjct: 271 SWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNV 330
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
GL D + ++N++M MY+ CG + A ++F M +D+ SW+ +I GY
Sbjct: 331 FSLGLN--------DSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQ 382
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G G+EA FS M ++ KP + +LS + L GR+ L +G+
Sbjct: 383 AGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFC-FGLEQNST 441
Query: 483 HYTCVIDMLGRAGQLNEAYEL 503
+ +I+M + G + EA ++
Sbjct: 442 VRSTLINMYSKCGNIKEASKI 462
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 206/406 (50%), Gaps = 15/406 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A +L+ CA ++ G++IH++++ G + SL MY++C +M+ L +
Sbjct: 204 FTFAI---ALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCL 260
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F N+S E +V ++ ++I + K ++ F MR V P++ TF + C +
Sbjct: 261 FENMS-ERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSR 319
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++ +++H VF LGL+ + + ++++ Y C ++ A +F+ + RD++ W+ ++ G
Sbjct: 320 LVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGG 379
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y+Q G +A + F M + G + F + +LS M + GR VH + G +
Sbjct: 380 YSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQN 439
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + LI+MY K + EA +IFE + DI S +++ + + G + LF++ L
Sbjct: 440 STVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 499
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
GF PD VTF +VL AC+H G+ G+ N + + + + + + ++D+
Sbjct: 500 VGFSPDSVTFISVLTACTH-----SGQLDLGFHYFNLMQEKYNMRPAKEHY--GCMVDLL 552
Query: 390 TKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDG---QGKEALD 431
+ G + +A+ + +MS KKD W +++ G +G+ A +
Sbjct: 553 CRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAE 598
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-- 436
F N+ + G++R A+ VF KM +D+ SW +I GY EA+ +FS M
Sbjct: 34 TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ + PD VL AC S ++ G E L + ++ ++ + ++DM R G+
Sbjct: 94 VDPAVSPDTSVVSVVLKACGQSSNIAYG-ESLHAYAVKTSLLSSVFVGSSLLDMYKRVGK 152
Query: 497 LNEAYELALAMPNEANPVVWRTLL 520
+ ++ + MP N V W ++
Sbjct: 153 IEKSCRVFSEMPFR-NAVTWTAII 175
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/572 (32%), Positives = 322/572 (56%), Gaps = 10/572 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+++ ++ +G+ + IN + YA F +S EP++ +NA+I G+
Sbjct: 5 QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVS-EPDILLWNAIIKGYTQK 63
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ + + M+ V P+ +TF ++K C K+IHG FK G +V++
Sbjct: 64 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++LV+ Y K + A VF++L R VV W ++++GY Q G+ +AL VF+ M + +
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ V++A + G+ +HG+V K+G + ++ +L MY K V A
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F ME+ ++ WN++++ + G + ++LF M++ + D +T + + A + + +L
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
R + GYI + DD F+N L+DMY KCGS+ A+ VF +++ KDV
Sbjct: 304 ELARWLDGYI--------SKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 355
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
W++MI+GYG+ G G+EA+ +++ M +A + P++ TF+G+L+AC +SG + +G E LM
Sbjct: 356 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+G+ P +HY+CV+D+LGRAG LN+AY+ ++MP + VW LL+A ++H L
Sbjct: 416 D-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLG 474
Query: 533 EIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
EIAA+++F L+P + G+YV +SN+Y + + V ++R M Q+ + K+ G S IE+
Sbjct: 475 EIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGN 534
Query: 593 LHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
L TF DRSHP++K I+ EL L RL+ G
Sbjct: 535 LETFQVGDRSHPKSKEIFEELDRLEKRLKAAG 566
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 197/429 (45%), Gaps = 35/429 (8%)
Query: 4 KISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI 63
+IS+++P +CF F + L+ C + G++IH + G
Sbjct: 77 QISQVHP--NCFTF------------------LYVLKACGGTSVEGIGKQIHGQTFKYGF 116
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
+ SL++MY+K Q+ YA VF+ L + V ++ ++ISG+ N + L+ F
Sbjct: 117 GSNVFVQNSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIISGYVQNGDPMEALNVFK 175
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
MRQ V PD ++ +V + + K IHGLV KLGL+ + I +L Y K
Sbjct: 176 EMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRG 235
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+E A F + +++LWNAM++GYA G +A+++FR M + I + T+ +
Sbjct: 236 LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVL 295
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A +G + R + G + K Y V LIDMY K + A +F+ + +KD+
Sbjct: 296 ASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVL 355
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI----- 358
W+ ++ + G+ + L++ M AG P+ TF +L AC + + G ++
Sbjct: 356 WSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMP 415
Query: 359 ---------HGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
H VV+ L + G D M+ + + G++ A + K+ +
Sbjct: 416 DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGE 475
Query: 410 VASWNIMIL 418
+A+ + IL
Sbjct: 476 IAAEQLFIL 484
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 329/596 (55%), Gaps = 14/596 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + ++ G+++H ++ + S + ++MYSK + A +F+ +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ ++NA+ G N + + MR G+ PD +F I C ++ A
Sbjct: 498 PYKDSI-SWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETG 556
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L K G+ + +GS+L++ Y K +E + K+F ++ +V NA++ G+ Q
Sbjct: 557 KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQN 616
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG--YDSGVP 271
+A+++F+++ K+G+ S T + +LS G+ VH +K G YD +
Sbjct: 617 NNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTL- 675
Query: 272 VMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+ +L +Y K K + +A ++ EM + K++F W +I++ + Q G D +L F RM
Sbjct: 676 LGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC 735
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+ D TF++VL ACS + A G++IHG I +G + +AL+DMY+
Sbjct: 736 NVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETA--------TSALIDMYS 787
Query: 391 KCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + + F ++ +K+D+ WN MI+G+ +G EAL +F M E ++KPDEVTF+
Sbjct: 788 KCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFL 847
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVL AC+HSG +S+GR F M YG+ P ++HY C ID+LGR G L EA E +P
Sbjct: 848 GVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPF 907
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ VVW T LAA R+H + + +IAA+++ +LEP + YVL+S+++ A G + E
Sbjct: 908 RPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVT 967
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
R +MR++ V K PGCSWI + + F+ D+ HP+ IY L LT +++ D
Sbjct: 968 RESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIYEMLGDLTGMMKKDND 1023
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/515 (27%), Positives = 262/515 (50%), Gaps = 12/515 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A+ +GQ++H+ + G+ + +SLIN+Y+KC A VF
Sbjct: 334 TRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF 393
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+LSCE N+ +NAM++GF N+ + + F +M + + D++TF ++ C + +
Sbjct: 394 -DLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSF 452
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
K++H + K +D+ +++ +A ++ Y K + +A +F +P +D + WNA+ G
Sbjct: 453 YLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGL 512
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ E +A+ + +RM GI + + ++A + + G+ +H + +K G S
Sbjct: 513 AQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH 572
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID+Y K V + +IF ++ I N+++ Q N D ++LF ++L
Sbjct: 573 AVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKD 632
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P VTFS++L CS G+Q+H Y + +G+ DD + +L +Y
Sbjct: 633 GLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVL-------YDDTLLGVSLAGIYL 685
Query: 391 KCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K + DA + T+M K++ W +I GY +G G +L F M ++ DE TF
Sbjct: 686 KSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFA 745
Query: 450 GVLSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
VL ACS + G+E L+ +S +G T + +IDM + G + ++E +
Sbjct: 746 SVLKACSDVTAFADGKEIHGLITKSGFGSYETAT--SALIDMYSKCGDVISSFEAFKELK 803
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
N+ + + W +++ +G D A + Q++ +L+
Sbjct: 804 NKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQ 838
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 253/509 (49%), Gaps = 16/509 (3%)
Query: 35 CIASLQLCAHQTN-LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C +S+ C H+ Q+ + S M + G +++ ++I+ + ++ +A + +
Sbjct: 236 CWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKM 295
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P+ +NA+ISG + F L + MR G+ P + TF ++ ++ A +E
Sbjct: 296 P-TPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEG 354
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H GLD +V++GS+L+N Y KC +A VF+ +++V+WNAM+ G+ Q
Sbjct: 355 QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN 414
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+A+ +F+ M + + FT +L A + F G+ VH + +K D + V
Sbjct: 415 ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVA 474
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
NA +DMY K +G+A +F ++ KD SWN++ Q + + + RM G
Sbjct: 475 NATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGIT 534
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD V+FST + ACS++ A G+QIH + G+ N + + ++L+D+Y+K G
Sbjct: 535 PDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHA--------VGSSLIDLYSKHG 586
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ ++ +F ++ + N +I G+ + EA+ +F + + LKP VTF +LS
Sbjct: 587 DVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILS 646
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG---RAGQLNEAYELALAMPNE 510
CS S + G++ + + GV+ + + + G ++ L +A +L MP+
Sbjct: 647 GCSGSLNSAIGKQ-VHCYTLKSGVL--YDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 703
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
N W +++ +G D + ++ R+
Sbjct: 704 KNLFEWTAIISGYAQNGYGDHSLVSFWRM 732
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 251/508 (49%), Gaps = 48/508 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ L G+++H ++++G S +L++MY+KC + A VF+ ++C P+
Sbjct: 175 LSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIAC-PD 233
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++MI+ ++ + L F+ M ++G PD+ T +I
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTII----------------- 276
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+T ++ A + +++P V WNA+++G+AQ G
Sbjct: 277 ------------------STLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFN 318
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +++ M G+W +R T +LSA M F G+ +H V G D+ V V ++LI+
Sbjct: 319 VLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLIN 378
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K C +A +F++ EK+I WN+++T Q + +R+F M+ Q D T
Sbjct: 379 LYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFT 438
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC++L++ G+Q+H + N C DI +F+ NA +DMY+K G++ DA
Sbjct: 439 FVSILGACTYLSSFYLGKQVHCVTIKN-------CMDI-SLFVANATLDMYSKYGAIGDA 490
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ +F+ + KD SWN + +G + + +EA+ M M + PD+V+F ++ACS+
Sbjct: 491 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 550
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G++ + + +YG+ + +ID+ + G + + ++ A + ++ V
Sbjct: 551 RATETGKQ-IHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKI-FAQVDASSIVPINA 608
Query: 519 LLAASRLHGNTDLAEIAAQRVFQ--LEP 544
L+A + N D A Q+V + L+P
Sbjct: 609 LIAGFVQNNNEDEAIQLFQQVLKDGLKP 636
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 197/422 (46%), Gaps = 51/422 (12%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSIT---SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
Q + +H +LR G SPL SL+ +Y K ++ YA + E +++
Sbjct: 83 QTCRALHGRILRGG---SPLLGRLGDSLVELYCKSGRVGYAWSALG-YAGERASGAASSL 138
Query: 106 ISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+S + L F ++R G PD++ ++ C V + +++H V K G
Sbjct: 139 LSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG 198
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
V+ +ALV+ Y KC + A +VF+ + D + W++M+ Y ++G + +AL +F
Sbjct: 199 FSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFS 258
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
RM K G + T+ ++S L +GR+ H
Sbjct: 259 RMDKMGSAPDQVTLVTIISTLA-----SSGRLDH-------------------------- 287
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
A + + M +WN++++ H Q G L L+ M S G P TF+++L
Sbjct: 288 ----ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLS 343
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
A +++ A + G+Q+H V++GL N VF+ ++L+++Y KCG DA+ VF
Sbjct: 344 AAANMKAFVEGQQMHAAAVMHGLDAN--------VFVGSSLINLYAKCGCPSDAKNVFDL 395
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+K++ WN M+ G+ + +EA+ MF M L+ DE TFV +L AC++ G
Sbjct: 396 SCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLG 455
Query: 465 RE 466
++
Sbjct: 456 KQ 457
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT + L+ C+ T G+EIH + ++G + ++LI+MYSKC + + F
Sbjct: 742 ATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKE 801
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
L + ++ +N+MI GF N +A + L F M +L + PD+ TF ++ C + E
Sbjct: 802 LKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISE 861
Query: 153 VKKIHG---LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLW 203
+ G V+ L LD Y + ++ + ++EA + ++LP R D V+W
Sbjct: 862 GRHFFGSMRKVYGLTPRLDHY--ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVW 914
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 314/580 (54%), Gaps = 13/580 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+KG+ IHS + + T+L+N Y+KC + A VF+ + C +V T+N+MIS
Sbjct: 26 LRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCR-SVGTWNSMIS 84
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ ++ + + F M+ G D+ TF ++ C + + K + + + +L
Sbjct: 85 AYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+++G+AL+ Y +C+ E A +VF + ++++ W+A++ +A G +AL FR M
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+EGI +R T +L+ + +H ++ + G D + NAL+++YG+ + G
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCE-TG 263
Query: 288 E---ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
E A I + M+E+ I +WN ++ + G L + R+ D VTF +VL
Sbjct: 264 ELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLN 323
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
AC+ +L G+ IH V GL DV + NAL +MY+KCGSM +A+ +F
Sbjct: 324 ACTSSTSLAEGKMIHSNAVECGLD--------SDVIVKNALTNMYSKCGSMENARRIFDS 375
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M + SWN M+ Y G+ +E L + M + +K + +TFV VLS+CSH+G +++G
Sbjct: 376 MPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEG 435
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
++ + G+ EHY C++D+LGRAG+L EA + MP+E V W +LL A R
Sbjct: 436 CQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACR 495
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
+H + D ++AA+++ +L+PG+ V++SNIY G ++ +R M + V+K PG
Sbjct: 496 VHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGI 555
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
S I++K+ +H F D SHP A IY ++ L +RE G
Sbjct: 556 SSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAG 595
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 209/404 (51%), Gaps = 12/404 (2%)
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
GV + TF ++ D A+ + K IH V + LDV++ +ALVNTY KC + +A
Sbjct: 5 GVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDA 64
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
KVF+ +P R V WN+M++ Y+ +A +F+RM EG R T +L A +
Sbjct: 65 RKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNP 124
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
++G+ V + + ++ + V ALI MY + + A ++F M++K++ +W++I+
Sbjct: 125 ENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAII 184
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
T G+ LR F M G P+ VTF ++L + + L +IH I +GL
Sbjct: 185 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 244
Query: 369 KNGSCKDIDDVFMNNALMDMYTKC--GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
D M+NAL+++Y +C G + A+++ +M ++ + +WN++I GY + G+
Sbjct: 245 --------DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRS 296
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+EAL+ + + + D+VTF+ VL+AC+ S L++G+ + G+ +
Sbjct: 297 REALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGK-MIHSNAVECGLDSDVIVKNA 355
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+ +M + G + A + +MP + V W +L A HG ++
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRS-AVSWNGMLQAYAQHGESE 398
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 142/272 (52%), Gaps = 15/272 (5%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYN 103
+ L++ IH + G+ D+ +L+N+Y +C ++ A + + E + +N
Sbjct: 226 SGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMD-EQQITAWN 284
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
+I+G+ + + + L+ + + QL +P DK TF ++ C ++ E K IH +
Sbjct: 285 VLINGYTLHGRSREALETYQRL-QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
GLD DV + +AL N Y KC ME A ++F+ +P+R V WN M+ YAQ GE + L++
Sbjct: 344 CGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKL 403
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNA----LI 277
R+M +EG+ ++ T VLS+ G G + H +G+D G+ V L+
Sbjct: 404 IRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHS----LGHDRGIEVKTEHYGCLV 459
Query: 278 DMYGKGKCVGEALE-IFEMMEEKDIFSWNSIM 308
D+ G+ + EA + I +M E +I +W S++
Sbjct: 460 DLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 153/318 (48%), Gaps = 15/318 (4%)
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
EG+ + T VL++++ + G+ +H V + + V V AL++ Y K + +
Sbjct: 4 EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A ++F+ M + + +WNS+++ + +F RM G + D VTF ++L AC +
Sbjct: 64 ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L HG+ + I D+F+ AL+ MY +C S +A VF +M +K
Sbjct: 124 PENLQHGKHVRESISETSFEL--------DLFVGTALITMYARCRSPENAAQVFGRMKQK 175
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA-CSHSGFLSQGREF 467
++ +W+ +I + G EAL F M + + P+ VTF+ +L+ + SG R
Sbjct: 176 NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-- 233
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGR--AGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
+ L+ + +G+ T ++++ GR G+L+ A E+ L +E W L+ L
Sbjct: 234 IHLLITEHGLDDTTTMSNALVNVYGRCETGELDVA-EVILQEMDEQQITAWNVLINGYTL 292
Query: 526 HGNTDLAEIAAQRVFQLE 543
HG + A QR QLE
Sbjct: 293 HGRSREALETYQR-LQLE 309
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T I+ L C T+L +G+ IHS + G+ + +L NMYSKC M+ A
Sbjct: 312 PVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARR 371
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+++ V ++N M+ + + + + L M Q GV + TF ++ C
Sbjct: 372 IFDSMPIRSAV-SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAG 430
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
+ E + H L G+++ LV+ + ++EA K ++P ++V W ++
Sbjct: 431 LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASL 490
Query: 207 V 207
+
Sbjct: 491 L 491
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 321/592 (54%), Gaps = 11/592 (1%)
Query: 21 SGNQTFNHPFTLATCIAS--LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
S + +H + T + S L+ C +N+ G+ +H+Y ++T ++ S +SL++MY
Sbjct: 95 SAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK 154
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFP 138
+ ++ + VF+ + N T+ A+I+G +GL +F+ M + L D YTF
Sbjct: 155 RVGKIDKSCRVFSEMPFR-NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFA 213
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+K C + V K IH V G + + ++L Y +C M++ L +FE + R
Sbjct: 214 IALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER 273
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
DVV W +++ Y +IG+ KA+E F +M + + T + SA + G +H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
V+ +G + + V N+++ MY + A +F+ M +DI SW++I+ + Q G +
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+ F M +G +P +++L ++A + GRQ+H + GL +N + +
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVR---- 449
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
++L++MY+KCGS+++A M+F + + D+ S MI GY G+ KEA+D+F +
Sbjct: 450 ----SSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+PD VTF+ VL+AC+HSG L G + +M+ Y + P EHY C++D+L RAG+L+
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+A ++ M + + VVW TLL A + G+ + AA+R+ +L+P V ++NIY
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
+ G EE ++R M+ + V K PG S I++KD + F+S DR HP+++ IY
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 10/285 (3%)
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR--RMSKEGIWMSRFTVTGVL 242
+ A +VF+++P D+V W +++ Y +AL +F R+ + ++ VL
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
A G +H VK S V V ++L+DMY + + ++ +F M ++
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+W +I+T G + L F M + D TF+ L AC+ L + +G+ IH ++
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+V G + + + N+L MYT+CG M+D +F MS++DV SW +I+ Y
Sbjct: 236 IVRGF--------VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
GQ +A++ F M +++ P+E TF + SAC+ L G +
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 16/254 (6%)
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--RMLSAGFQPDLVTFSTVLPAC 346
A ++F+ M DI SW SI+ + N D L LF R++ PD S VL AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
+ + +G +H Y V L + V++ ++L+DMY + G + + VF++M
Sbjct: 119 GQSSNIAYGESLHAYAVKTSL--------LSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
++ +W +I G G+ KE L FS M ++ D TF L AC+ + G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
+ R G V T+ + M G++ + L M +E + V W +L+ A +
Sbjct: 231 IHTHVIVR-GFVTTLCVANSLATMYTECGEMQDGLCLFENM-SERDVVSWTSLIVAYKRI 288
Query: 527 GNTDLAEIAAQRVF 540
G E+ A F
Sbjct: 289 GQ----EVKAVETF 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM--C 437
F N+ + G++R A+ VF KM D+ SW +I Y EAL +FS M
Sbjct: 41 FDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVV 100
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ + PD VL AC S ++ G E L + ++ ++ + ++DM R G++
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYG-ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 498 NEAYELALAMPNEANPVVWRTLL 520
+++ + MP N V W ++
Sbjct: 160 DKSCRVFSEMPFR-NAVTWTAII 181
>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
Length = 834
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/608 (32%), Positives = 316/608 (51%), Gaps = 37/608 (6%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN--V 99
C T L +++H++ ++ + T+++++Y+K + A F L PN V
Sbjct: 255 CKAITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGL---PNHTV 311
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
T NAM+ G + + F M + G+ + + C +V
Sbjct: 312 ETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACAEVK----------- 360
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
G D+DV + +A+++ Y KC+ + EA VF+E+ RD V WN ++ Q +
Sbjct: 361 ----GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDT 416
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
+ M + G+ FT VL A + + G VVHG +K G V + ++DM
Sbjct: 417 IVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDM 476
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K + EAL++ + + +++ SWNSI+ + + F ML G +PD T+
Sbjct: 477 YCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTY 536
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+TVL +C++LA + G+QIHG I+ + + D F+++ L+DMY KCG+M D+Q
Sbjct: 537 ATVLDSCANLATIELGKQIHGQIIKQEM--------LGDEFISSTLVDMYAKCGNMPDSQ 588
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
++F K+ K D SWN MI GY + GQG EAL+MF +A + P+ TFV VL ACSH G
Sbjct: 589 LMFEKVQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVG 648
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L G + LM SRY + P +EH+ C+ EA + +MP EA+ V+W+TL
Sbjct: 649 LLDDGCRYFHLMTSRYKLEPQLEHFACM--------GPQEALKFIRSMPLEADAVIWKTL 700
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L+ ++ + ++AE AA V +L+P Y+L+SN+Y GK+ +V R MRQ ++
Sbjct: 701 LSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLK 760
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF-DSDSTA 638
K PGCSWIE++ +H F+ ++ HP ++ +Y L++L ++ G A LF + D
Sbjct: 761 KEPGCSWIEVQSEMHGFLVGEKVHPRSREVYEMLNNLICEMKLSGYEPASALFAEVDEEG 820
Query: 639 SGFEKHRL 646
S E+ L
Sbjct: 821 STSEQDDL 828
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 246/497 (49%), Gaps = 59/497 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L G +IH+ ++TG+ + ++L++MY KC ++ AL F+ + E N
Sbjct: 170 LKACGGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMG-ERN 228
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIH 157
++ A+I+G N+ +GL+ C C + L +++H
Sbjct: 229 SVSWGAVIAGCVQNEQYMRGLELL--------------------CRCKAITCLSTARQLH 268
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
K D +G+A+V+ Y K + +A + F LP V NAM+ G + G
Sbjct: 269 AHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGA 328
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+++F+ M++ GI +++GV SA + G+D V V NA++
Sbjct: 329 EAMQLFQFMTRSGIGFGVVSLSGVFSACAEV---------------KGFDVDVCVRNAIL 373
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D+YGK K + EA +F+ ME++D SWN+I+ EQ ++ T+ + ML +G + D
Sbjct: 374 DLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDF 433
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ +VL AC+ L +L +G +HG + +GL D F+++ ++DMY KCG + +
Sbjct: 434 TYGSVLKACAGLQSLEYGLVVHGKAIKSGLGL--------DAFVSSTVVDMYCKCGMITE 485
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A + ++ +++ SWN +I G+ ++ Q +EA FS M + +KPD T+ VL +C++
Sbjct: 486 ALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCAN 545
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLNEAYELALAMPNEA 511
+ G++ +G + E + ++DM + G + ++ +L +
Sbjct: 546 LATIELGKQI-------HGQIIKQEMLGDEFISSTLVDMYAKCGNMPDS-QLMFEKVQKL 597
Query: 512 NPVVWRTLLAASRLHGN 528
+ V W ++ LHG
Sbjct: 598 DFVSWNAMICGYALHGQ 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 240/546 (43%), Gaps = 95/546 (17%)
Query: 25 TFNHPFTLATCIASLQLCAH--QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
TF+H + QLCA + L GQ H+ ML +G + + L+ MY++C
Sbjct: 31 TFSHVY---------QLCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGG 81
Query: 83 MKYALFVFN---------------------------NLSC---EPNVFTYNAMISGFYSN 112
+A VF+ +L C +P+V ++NA++SG+
Sbjct: 82 AAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQR 141
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ M + GV PD+ T L+K C + + +IH L K GL++DV G
Sbjct: 142 GMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAVKTGLEMDVRAG 201
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SALV+ Y KC+ +E+AL F + R+ V W A++ G Q ++ + LE+ R
Sbjct: 202 SALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAGCVQNEQYMRGLELLCRCKA---- 257
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+ R +H +K + S V A++D+Y K + +A
Sbjct: 258 ---------------ITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRA 302
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + + + N++M + G ++LF M +G +V+ S V AC+
Sbjct: 303 FFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSACA----- 357
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
++ G+ V DV + NA++D+Y KC ++ +A +VF +M ++D S
Sbjct: 358 ----EVKGFDV--------------DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVS 399
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS-----HSGFLSQGREF 467
WN +I + ++ + + M + ++ D+ T+ VL AC+ G + G+
Sbjct: 400 WNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYGLVVHGKA- 458
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++S G+ + + V+DM + G + EA +L + + V W +++A L+
Sbjct: 459 ---IKSGLGLDAFVS--STVVDMYCKCGMITEALKLHDRIGGQ-ELVSWNSIIAGFSLNK 512
Query: 528 NTDLAE 533
++ A+
Sbjct: 513 QSEEAQ 518
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/595 (31%), Positives = 320/595 (53%), Gaps = 14/595 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+++ + + C +++G +H + + GI + L++MY K +++ A V
Sbjct: 223 FTMSSVLLA---CGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRV 279
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ ++ + +V T+N MI G+ + F M G +PD + I+ C
Sbjct: 280 FSKMAVKDSV-TWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGD 337
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K +H + G + D + L++ Y KC + A +VF+ +D V WN+++NG
Sbjct: 338 LQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLING 397
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Y Q G + + LE F+ M E S T +LS + GR +H V+K G+++
Sbjct: 398 YTQSGYYKEGLESFKMMKMERKPDS-VTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAE 456
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + N+L+D+Y K + + L++F M DI SWN+++ + ++ + M +
Sbjct: 457 LIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRT 516
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G PD T +LP CS LA G++IHGYI +G N V + NAL++MY
Sbjct: 517 EGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESN--------VPIGNALIEMY 568
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+KCGS+ + VF M +KDV +W +I +GM G+GK+AL F M + + PD V F+
Sbjct: 569 SKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFI 628
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+ ACSHSG + +G F M++ Y + P +EHY CV+D+L R+G L +A E L+MP
Sbjct: 629 AFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPM 688
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + +W LL+A R GNT++A+ ++++ +L G YVL+SNIY GK+++V +
Sbjct: 689 KPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTV 748
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R++M+ + ++K PG SWIE++ ++ F + D+S + + L L + + G
Sbjct: 749 RNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEG 803
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 268/517 (51%), Gaps = 20/517 (3%)
Query: 8 INPFSSCFNFS-TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDS 66
+ P C NF+ T +Q F L T + N + + +HS ++ +G+ S
Sbjct: 1 MKPPKFCSNFNNTPEPSQEFLRSSLLKTL-------SSAKNTPQLRTVHSLIITSGLSLS 53
Query: 67 PLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR 126
+ LI+ Y++ ++ VF ++S NV+ +N++I N + L ++ MR
Sbjct: 54 VIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMR 113
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
+ + PD +TFP +I C ++ + +H ++G + D+YIG+AL++ Y + ++
Sbjct: 114 EKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLD 173
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A VFEE+ RD V WN++++GY G + AL+++ + G+ FT++ VL A
Sbjct: 174 NARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACG 233
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ K G VHG++ K+G V + N L+ MY K + + EA +F M KD +WN+
Sbjct: 234 SLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNT 293
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ + Q G H+ +++LF M+ GF PD+++ ++ + AC L G+ +H Y++ +G
Sbjct: 294 MICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
C D N L+DMY KCG + AQ VF KD +WN +I GY G
Sbjct: 353 F----EC----DTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY 404
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
KE L+ F M + + KPD VTFV +LS S ++QGR + ++G +
Sbjct: 405 KEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQGRG-IHCDVIKFGFEAELIIGNS 462
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++D+ + G++++ ++ M + + + W T++A+S
Sbjct: 463 LLDVYAKCGEMDDLLKVFSYM-SAHDIISWNTVIASS 498
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 189/570 (33%), Positives = 312/570 (54%), Gaps = 14/570 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA+ ++Q G +H ++L+ G T+L++MYSKC + A VF+ + + +
Sbjct: 53 LKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMP-QRS 111
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV---LEVKK 155
V ++NAM+S + + L M LG P TF ++ ++ + L K
Sbjct: 112 VVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKS 171
Query: 156 IHGLVFKLGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
IH + KLG+ L+V + ++L+ Y++ M+EA KVF+ + + ++ W M+ GY +IG
Sbjct: 172 IHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIG 231
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+A +F +M + + + ++S I + VH +V+K G + PV N
Sbjct: 232 HAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVEN 291
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
LI MY K + A IF+++ EK + SW S++ + G+ L LF RM+ +P
Sbjct: 292 LLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRP 351
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ T +TV+ AC+ L +L G++I YI +NGL D + +L+ MY+KCGS
Sbjct: 352 NGATLATVVSACADLGSLSIGQEIEEYIFLNGLES--------DQQVQTSLIHMYSKCGS 403
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFVGVLS 453
+ A+ VF +++ KD+ W MI Y + G G EA+ +F M A+ + PD + + V
Sbjct: 404 IVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFL 463
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG + +G ++ M+ +G+ PT+EH TC+ID+LGR GQL+ A MP +
Sbjct: 464 ACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQA 523
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW LL+A R+HGN +L E+A R+ PG G+YVLM+N+Y + GK++E +R++M
Sbjct: 524 QVWGPLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSM 583
Query: 574 RQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
+ + K G S +E+ D HTF ++S
Sbjct: 584 DGKGLVKESGWSQVEVTDTYHTFAVGNQSQ 613
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 225/443 (50%), Gaps = 24/443 (5%)
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S +++T+N MI +N F + L+ ++ M GV + T+P L+K C ++ ++
Sbjct: 6 SFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHG 65
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+HG V KLG D ++ +ALV+ Y KC + A +VF+E+P R VV WNAMV+ Y++
Sbjct: 66 TMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRR 125
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN---GRVVHGIVVKMGYDS-G 269
+AL + + M G + T +LS + F+ G+ +H ++K+G
Sbjct: 126 SSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLE 185
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V + N+L+ MY + + EA ++F++M+EK I SW +++ + + G+ LF +M
Sbjct: 186 VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH 245
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
D V F ++ C + L+ +H ++ G C + D V N L+ MY
Sbjct: 246 QSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCG------CNEKDPV--ENLLITMY 297
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG++ A+ +F + +K + SW MI GY G EALD+F M ++P+ T
Sbjct: 298 AKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLA 357
Query: 450 GVLSACSHSGFLSQGRE-----FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
V+SAC+ G LS G+E FL +ES V T +I M + G + +A E+
Sbjct: 358 TVVSACADLGSLSIGQEIEEYIFLNGLESDQQV------QTSLIHMYSKCGSIVKAREV- 410
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
+ + VW +++ + +HG
Sbjct: 411 FERVTDKDLTVWTSMINSYAIHG 433
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLAT +++ CA +L GQEI Y+ G+ TSLI+MYSKC + A VF
Sbjct: 355 TLATVVSA---CADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVF 411
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMA 149
++ + ++ + +MI+ + + + + F+ M G++PD + + C
Sbjct: 412 ERVT-DKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGL 470
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV--VLWNAM 206
V E +K + G+ V + L++ + ++ AL + +P DV +W +
Sbjct: 471 VEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMP-PDVQAQVWGPL 529
Query: 207 -----VNGYAQIGEF 216
++G ++GE
Sbjct: 530 LSACRIHGNVELGEL 544
>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Cucumis sativus]
Length = 616
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 329/612 (53%), Gaps = 22/612 (3%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
ST G H F+ L+ A ++ + +HS +++ G+I+ L+ +Y
Sbjct: 6 STHFGRSRLVHSFSFNV----LKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVY 61
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGF----YSNDFAFKGLDFFNHMRQLG---V 130
KC + A +F+ ++ NV ++N +I G Y +F + F + +++ V
Sbjct: 62 VKCRDLDSARTLFDEMA-RRNVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLV 120
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
PD TF L + C + V +++H V K+G DLD ++GSA+V+ Y KC E+A
Sbjct: 121 DPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARL 180
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
F + RD+VLWN M+ +A+EVFR M EG FT + +LS G
Sbjct: 181 AFSCILYRDLVLWNVMLYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGS 240
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G+ +H +++K +D + V ++L+++Y K + +A ++F+ M ++ SW +++
Sbjct: 241 GELGKQLHCLLIKQSFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVG 300
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q ++LF RML + PD +TF+++L +C + Q+H ++ G
Sbjct: 301 YGQHEYGKEAVKLFRRMLRKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAF 360
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
S +NN L+ Y+KCG + A F +++ D+ +W +I G + G K+A+
Sbjct: 361 LS--------INNGLIYAYSKCGIIAAALQCFRLVAEPDLVTWTSIICGLALCGLEKDAV 412
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++PD++ F+GVLSACSH GF+S G + LM ++Y +VP EH TC+ID+
Sbjct: 413 KLFDKMLSYGIRPDKIAFLGVLSACSHGGFVSMGLHYFNLMTNQYQLVPDSEHLTCLIDL 472
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGRAG L++A++L +MP EA P R + A R HGN LA+ A + F EP NY
Sbjct: 473 LGRAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHGNLRLAKRAME--FASEPDEPVNY 530
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
L+SN+Y + G++ +V +R + + +K PG SW+E+ H FIS DRSHP++ +Y
Sbjct: 531 SLVSNMYASEGRWSDVARMRKLINDRCEQKTPGLSWVEIAGYNHLFISGDRSHPQSLDLY 590
Query: 611 AELHSLTARLRE 622
A L L +++
Sbjct: 591 AMLGLLLNTMKK 602
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 322/597 (53%), Gaps = 47/597 (7%)
Query: 44 HQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
H+++L+ G ++H+ L G+ P+ + L+++Y+ P++
Sbjct: 85 HRSHLRLGVQLHALSLSLGLSRHPILLPRLLSVYTS----------------HPSLLPSA 128
Query: 104 AMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL 163
A ++ + + M + GVLPD +T+P +++ C + ++ + +H
Sbjct: 129 ASVAAALAA---------YQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGA 179
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G+D +++ +AL++ Y KC + A KVF+ + RDVV WN+M++ YA +G++ +A+E+F
Sbjct: 180 GMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELF 239
Query: 224 RRMSKEG---IWMSRFTVTGV-----------LSALIMMGFFKNGRVVHGIVVKMGYDSG 269
RRM EG + + R V G L+A +G+ + G+ +HG+ V+M D
Sbjct: 240 RRMRDEGTEPVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQV 299
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V NALI MY + K + A +F M+E + +WN++++ + +F M+
Sbjct: 300 ESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMIC 359
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P+ VT T L C+ +A L HG+++HG+IV +G + N+L+DMY
Sbjct: 360 RGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYR--------LLWNSLIDMY 411
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
+K G + AQ VF M D+ S+ MI GYGM G+G AL +F M ++ +KPD + V
Sbjct: 412 SKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMV 471
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VLSACSHSG + +G E M YG+ P +EHY+C+ID+ RAG L +A E+ P
Sbjct: 472 TVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPF 531
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+W L+ A GN ++ E AA+++ ++ + G+YVL++N+Y A G ++E+ +
Sbjct: 532 PPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATV 591
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC 626
R MR V K PG +W +L +G F+ DRS+P A IY L L+ ++R +C
Sbjct: 592 RKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNPLAPEIYVVLDELSEQMRNINNC 648
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 182/375 (48%), Gaps = 22/375 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA L G+ +H + G+ + +L++MY+KC + A VF+ + + +
Sbjct: 157 LRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGM-VQRD 215
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP--------------DKYTFPCLIKCC 144
V ++N+MIS + + + ++ F MR G P D T + C
Sbjct: 216 VVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMVRGGAEVDYVTLVIGLNAC 275
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
V + K+IHGL ++ D + +AL+ Y +C+ ME A +F L VV WN
Sbjct: 276 SRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWN 335
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M++ +A +A +FR M G+ + TV L+ + ++G+ +HG +VK
Sbjct: 336 TMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHGHIVKH 395
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G+ + N+LIDMY K + A +F+ M++ D+ S+ S++ + G LRLF
Sbjct: 396 GFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLF 455
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
++M+ +G +PD + TVL ACSH ++ G ++ +V++ K + +
Sbjct: 456 EQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIK-------PQMEHYSC 508
Query: 385 LMDMYTKCGSMRDAQ 399
++D+Y + G + A+
Sbjct: 509 MIDLYARAGLLEKAE 523
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L+ G+EIH +R +LI MY++C M+ A +F L
Sbjct: 267 TLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRML 326
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
C P V T+N M+S F +D A + F M GV P+ T + C V +
Sbjct: 327 EC-PGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHG 385
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++HG + K G + ++L++ Y K + A VF+ + D++ + +M+ GY
Sbjct: 386 QELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQ 445
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G+ AL +F +M GI + VLSA G G + + +V+ G +
Sbjct: 446 GKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEH 505
Query: 273 MNALIDMYGKGKCVGEALEIFE 294
+ +ID+Y + + +A E+ +
Sbjct: 506 YSCMIDLYARAGLLEKAEEMLD 527
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L LCA NLQ GQE+H ++++ G L SLI+MYSK ++ A VF+ +
Sbjct: 368 TVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTM 427
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ +Y +MI+G+ L F M G+ PD ++ C VLE
Sbjct: 428 D-DCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEG 486
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAMV---- 207
+++ + +V G+ + S +++ Y + +E+A ++ + P +W A+V
Sbjct: 487 EELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACH 546
Query: 208 -NGYAQIGE 215
G +IGE
Sbjct: 547 DRGNIEIGE 555
>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
Length = 906
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 322/607 (53%), Gaps = 46/607 (7%)
Query: 51 GQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G+E+HS+++R G+ ID +S +L+ YSK +MK +F ++ ++ ++N +I+G+
Sbjct: 299 GKEVHSFVVRHGMEIDVSVS-NALMTHYSKVLEMKDVESIFTSMDVR-DIVSWNTIIAGY 356
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
N + + L F + G+ PD +F L+ C V V ++HG +F+ + +
Sbjct: 357 VMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQET 416
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+ +ALV Y C ++A + F ++ +D + WNA+++ A + + V
Sbjct: 417 SLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIEKFFVLMSEMCR 476
Query: 230 GIWMSRFTVTGVLSALIMMGF--FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK----- 282
G+ ++ VL+ + M F K R HG +++GY V NA++D Y K
Sbjct: 477 GVNQCQWDSVTVLNVIHMSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSH 536
Query: 283 --------------------------GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
C+ +A IF M EKD+ SWN ++ ++ Q
Sbjct: 537 DASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDM 596
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
LF+ + S G +PD+V+ + +L AC HL ++ RQ H Y++ L
Sbjct: 597 DGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASL--------- 647
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+D+ + AL+D Y+KCG++ +A +F KKD+ ++ MI Y M G +EA+++FS M
Sbjct: 648 EDIHLEGALVDAYSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKM 707
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ ++PD V +LSACSH+G + G + + + VVPT EHY C++D+L R+G
Sbjct: 708 LKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLARSGH 767
Query: 497 LNEAYELALAMPNEA-NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ +AY AL MP A N W +LL A ++HG ++ ++AA R+F +E G GNYV+MSN
Sbjct: 768 IQDAYMFALDMPPHAVNANAWSSLLGACKVHGKVEIGQLAAGRLFSMEGGDIGNYVIMSN 827
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY A K++ V ++R M+ +++K GCSWIE++ H FI+SD +H + IY L S
Sbjct: 828 IYAADEKWDGVENVRKLMKSIDMKKPAGCSWIEVEKTRHLFIASDINHQDRSCIYDMLGS 887
Query: 616 LTARLRE 622
L ++++
Sbjct: 888 LYQQIKD 894
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 255/565 (45%), Gaps = 43/565 (7%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ---MKYAL 87
T T + CA +LQ G+ +H Y+++TG+ L +L++MY+KC M A
Sbjct: 174 TAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAH 233
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC-D 146
F+++ C+ +V ++N++I+G+ N + L F+ M G LP+ T ++ C
Sbjct: 234 RAFSSIRCK-DVVSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFT 292
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
K++H V + G+++DV + +AL+ Y K M++ +F + +RD+V WN +
Sbjct: 293 EFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTI 352
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ GY G H+AL +F+ + GI + +L+A +G K G VHG + +
Sbjct: 353 IAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPV 412
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+MNAL+ Y +A F + KD SWN+I++ C + + F
Sbjct: 413 LQETSLMNALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSA---CATSEQHIEKFFV 469
Query: 327 MLSA------GFQPDLVTFSTVLPACSHLAALMHGRQIHGY--------------IVVNG 366
++S Q D VT V+ S + R+ HG+ +++
Sbjct: 470 LMSEMCRGVNQCQWDSVTVLNVIHM-STFCGIKMVREAHGWSLRVGYTGETSVANAILDA 528
Query: 367 LAKNGSCKDIDDVFMNNA---------LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
K G D +F N+A ++ Y K + DA+++F M++KD+ SWN+MI
Sbjct: 529 YVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMI 588
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
Y + +A +F+ + LKPD V+ +L AC H + R+ M
Sbjct: 589 QLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYM--LRAS 646
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
+ I ++D + G + AY + P + + V + ++ +HG + A
Sbjct: 647 LEDIHLEGALVDAYSKCGNITNAYNIFQISPKK-DLVTFTAMIGCYAMHGMAEEAVELFS 705
Query: 538 RVFQLE--PGHCGNYVLMSNIYVAG 560
++ +L+ P H L+S AG
Sbjct: 706 KMLKLDIRPDHVVLTTLLSACSHAG 730
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 187/375 (49%), Gaps = 18/375 (4%)
Query: 156 IHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+HGL K G + + A+++ Y + + +AL +F+E+ D V WN ++ ++ G
Sbjct: 92 LHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMARPDAVCWNILITACSRRG 151
Query: 215 EFHKALEVFRRMSKEGIWM---SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
F A +FR M G+ + TV ++ A + GR VH VVK G +S
Sbjct: 152 LFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDTL 211
Query: 272 VMNALIDMYGK---GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
NAL+ MY K + + +A F + KD+ SWNS++ + + L LF +M+
Sbjct: 212 CGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQMI 271
Query: 329 SAGFQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
S G+ P+ T +++LP CS HG+++H ++V +G+ DV ++NALM
Sbjct: 272 SQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEI--------DVSVSNALMT 323
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
Y+K M+D + +FT M +D+ SWN +I GY M+G AL +F + + PD V+
Sbjct: 324 HYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVS 383
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F+ +L+AC+ G + G E + R V+ ++ + ++A+ +
Sbjct: 384 FISLLTACAQVGDVKTGMEVHGYIFQR-PVLQETSLMNALVTFYSHCDRFDDAFRAFTDI 442
Query: 508 PNEANPVVWRTLLAA 522
N+ + + W +L+A
Sbjct: 443 LNK-DSISWNAILSA 456
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 195/410 (47%), Gaps = 20/410 (4%)
Query: 54 IHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+H ++ G + S ++ ++++ Y + + AL +F+ ++ P+ +N +I+
Sbjct: 92 LHGLAVKAGRVASSATVAKAVMDAYGRFGSLADALLLFDEMA-RPDAVCWNILITACSRR 150
Query: 113 DFAFKGLDFFNHMRQLGV---LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
F M GV +P T ++ C + + +H V K GL+ D
Sbjct: 151 GLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPACAKWRHLQTGRSVHCYVVKTGLESDT 210
Query: 170 YIGSALVNTYLKC---QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
G+ALV+ Y KC + M +A + F + +DVV WN+++ GY + F +AL +F +M
Sbjct: 211 LCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDVVSWNSVIAGYIENQLFGEALALFSQM 270
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFK-NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
+G + TV +L F + +G+ VH VV+ G + V V NAL+ Y K
Sbjct: 271 ISQGYLPNYSTVASILPVCSFTEFGRHHGKEVHSFVVRHGMEIDVSVSNALMTHYSKVLE 330
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ + IF M+ +DI SWN+I+ + G H L LF +LS G PD V+F ++L A
Sbjct: 331 MKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHHRALGLFQGLLSTGIAPDSVSFISLLTA 390
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C+ + + G ++HGYI + + S + NAL+ Y+ C DA FT +
Sbjct: 391 CAQVGDVKTGMEVHGYIFQRPVLQETS--------LMNALVTFYSHCDRFDDAFRAFTDI 442
Query: 406 SKKDVASWNIMILGYGMDGQGKEA-LDMFSCMCEA--KLKPDEVTFVGVL 452
KD SWN ++ Q E + S MC + + D VT + V+
Sbjct: 443 LNKDSISWNAILSACATSEQHIEKFFVLMSEMCRGVNQCQWDSVTVLNVI 492
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 307/569 (53%), Gaps = 20/569 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PF + C L + G IH+ + +G SL+ MY C +M+
Sbjct: 124 YTYPFVIKACGDYLLP-------EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEV 176
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ L E + ++N MI+G++ N + L F+ M G+ PD T ++ C
Sbjct: 177 ARRVFD-LMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVC- 234
Query: 146 DVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ LEV +++H LV L D+ + ++L++ Y KC M+EA +F E+ RDVV W
Sbjct: 235 SYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWT 294
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+NGY G+ AL + + M E + + T+ VLSA + K+GR +HG ++
Sbjct: 295 TMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQ 354
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+S V V ALIDMY K V + +F ++ WN+I++ G + LF
Sbjct: 355 KLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELF 414
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ML P+ T +++LPA + L L R +HGY++ +G + + +
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGF--------LSRIEVATI 466
Query: 385 LMDMYTKCGSMRDAQMVFTKMSK--KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
L+D+Y+KCGS+ A +F + K KD+ +W+ +I GYGM G G+ A+ +F M ++ +K
Sbjct: 467 LIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVK 526
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+E+TF +L ACSH+G + +G M + +HYTCVID+LGRAG+L EAYE
Sbjct: 527 PNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYE 586
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L M N VW LL + +H N +L E+AA+ +F+LEPG+ GNYVL++NIY A G+
Sbjct: 587 LIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGR 646
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ + +R M +RK P S IE+++
Sbjct: 647 WRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 152/499 (30%), Positives = 254/499 (50%), Gaps = 15/499 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS---ITSLINMYSKCCQMKYALFVFNNLSC 95
LQ C + ++ ++IH++ + G++ SP S ++SL Y+ +A +F+ L
Sbjct: 25 LQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELR- 83
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVK 154
P++F++NAMI + ++ ++ L F M G PD YT+P +IK C D +
Sbjct: 84 NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
IH G D D ++ ++L+ Y+ C ME A +VF+ + R +V WN M+NGY + G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL VF M +GI TV VL + + GR VH +V + V N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L+DMY K + EA IF M+++D+ SW ++M + G+ L L M +P
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKP 323
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VT ++VL AC+ L +L HGR +HG+ + L +V + AL+DMY KC +
Sbjct: 324 NFVTLASVLSACASLYSLKHGRCLHGWAIRQKLE--------SEVIVETALIDMYAKCNN 375
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ + VF+K SK+ A WN +I G +G ++A+++F M + P++ T +L A
Sbjct: 376 VNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ L Q R + R G + IE T +ID+ + G L A+ + +P + +
Sbjct: 436 YAFLTDLQQARNMHGYL-IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDI 494
Query: 515 V-WRTLLAASRLHGNTDLA 532
+ W ++A +HG+ + A
Sbjct: 495 ITWSAIIAGYGMHGHGETA 513
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 307/569 (53%), Gaps = 20/569 (3%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
+ +PF + C L + G IH+ + +G SL+ MY C +M+
Sbjct: 124 YTYPFVIKACGDYLLP-------EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEV 176
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF+ L E + ++N MI+G++ N + L F+ M G+ PD T ++ C
Sbjct: 177 ARRVFD-LMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVC- 234
Query: 146 DVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ LEV +++H LV L D+ + ++L++ Y KC M+EA +F E+ RDVV W
Sbjct: 235 SYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWT 294
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
M+NGY G+ AL + + M E + + T+ VLSA + K+GR +HG ++
Sbjct: 295 TMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQ 354
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+S V V ALIDMY K V + +F ++ WN+I++ G + LF
Sbjct: 355 KLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELF 414
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ML P+ T +++LPA + L L R +HGY++ +G + + +
Sbjct: 415 KQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGF--------LSRIEVATI 466
Query: 385 LMDMYTKCGSMRDAQMVFTKMSK--KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
L+D+Y+KCGS+ A +F + K KD+ +W+ +I GYGM G G+ A+ +F M ++ +K
Sbjct: 467 LIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVK 526
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+E+TF +L ACSH+G + +G M + +HYTCVID+LGRAG+L EAYE
Sbjct: 527 PNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYE 586
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L M N VW LL + +H N +L E+AA+ +F+LEPG+ GNYVL++NIY A G+
Sbjct: 587 LIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGR 646
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ + +R M +RK P S IE+++
Sbjct: 647 WRDAEHVRLMMNNIGLRKTPAHSLIEVRN 675
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/499 (30%), Positives = 255/499 (51%), Gaps = 15/499 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLS---ITSLINMYSKCCQMKYALFVFNNLSC 95
LQ C + ++ ++IH++ + G++ SP S ++SL Y+ C +A +F+ L
Sbjct: 25 LQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR- 83
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVK 154
P++F++NAMI + ++ ++ L F M G PD YT+P +IK C D +
Sbjct: 84 NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGA 143
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
IH G D D ++ ++L+ Y+ C ME A +VF+ + R +V WN M+NGY + G
Sbjct: 144 LIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNG 203
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL VF M +GI TV VL + + GR VH +V + V N
Sbjct: 204 CVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWN 263
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L+DMY K + EA IF M+++D+ SW ++M + G+ L L M +P
Sbjct: 264 SLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKP 323
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ VT ++VL AC+ L +L HGR +HG+ + L +V + AL+DMY KC +
Sbjct: 324 NFVTLASVLSACASLYSLKHGRCLHGWAIRQKLE--------SEVIVETALIDMYAKCNN 375
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ + VF+K SK+ A WN +I G +G ++A+++F M + P++ T +L A
Sbjct: 376 VNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPA 435
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
+ L Q R + R G + IE T +ID+ + G L A+ + +P + +
Sbjct: 436 YAFLTDLQQARNMHGYL-IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDI 494
Query: 515 V-WRTLLAASRLHGNTDLA 532
+ W ++A +HG+ + A
Sbjct: 495 ITWSAIIAGYGMHGHGETA 513
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 196/596 (32%), Positives = 327/596 (54%), Gaps = 17/596 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCC---QMKYALFVFNN 92
A ++ C + G + ++L+TG DS + + LI+M+ K C ++ A VF+
Sbjct: 161 AVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDK 220
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E NV T+ MI+ + + +D F M G +PD++T LI C ++ +
Sbjct: 221 MR-EKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLS 279
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H V + GL LD+ +G +LV+ Y KC ++EA KVF+ + +V+ W A+VNGY
Sbjct: 280 LGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYV 339
Query: 212 QIGEFHK--ALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
+ G ++ A+ +F M +G + + FT +GVL A + F G VHG +K+G +
Sbjct: 340 RGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSA 399
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V N L+ +Y K + A + F+++ EK++ S + + + N + L +
Sbjct: 400 IDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVE 459
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G T++++L + + + G QIH +V G D+ +NNAL+ M
Sbjct: 460 YVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRT--------DLSVNNALISM 511
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y+KCG+ A VF M +V +W +I G+ G +AL++F M E +KP++VT+
Sbjct: 512 YSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTY 571
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VLSACSH G + + + M +G+VP +EHY C++D+LGR+G L+EA E +MP
Sbjct: 572 IAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMP 631
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+A+ +VWRT L + R+H NT L E AA+ + + EP Y+L+SN+Y G++E+V
Sbjct: 632 FDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAA 691
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR M+Q+ + K G SWIE+++ +H F D HP+A+ IY +L L +++ G
Sbjct: 692 IRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVG 747
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 236/510 (46%), Gaps = 20/510 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H L T L+ C N G+ +H + + + L + SLI +YSK A
Sbjct: 48 HNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAF 107
Query: 88 FVFNNL-SCEPNVFTYNAMISGFYSNDFAFKGLDFFNH-MRQLGVLPDKYTFPCLIKCCC 145
+F ++ + + +V +Y+++IS F +N K ++ F+ + Q GV P++Y F +I+ C
Sbjct: 108 SIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACL 167
Query: 146 DVMAVLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLK-CQF--MEEALKVFEELPLRDVV 201
+ G V K G D V +G L++ ++K C +E A KVF+++ ++VV
Sbjct: 168 KGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVV 227
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
W M+ AQ G +A+++F M G RFT+TG++S + F G+ +H
Sbjct: 228 TWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSW 287
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT--VHEQCGNHD 318
V++ G + V +L+DMY K V EA ++F+ M E ++ SW +++ V G
Sbjct: 288 VIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYER 347
Query: 319 GTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+R+F M L G P+ TFS VL AC+ L G Q+HG + GL+ ID
Sbjct: 348 EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSA------ID 401
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
V N L+ +Y K G M A+ F + +K++ S ++ D D+ +
Sbjct: 402 CV--GNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVE 459
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
T+ +LS + G + +G + + M + G + +I M + G
Sbjct: 460 YVGSGVSSFTYASLLSGAACIGTIGKGEQ-IHAMVVKIGFRTDLSVNNALISMYSKCGNK 518
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHG 527
A ++ M + N + W +++ HG
Sbjct: 519 EAALQVFNDME-DCNVITWTSIINGFAKHG 547
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 171/326 (52%), Gaps = 7/326 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL I+ +CA L G+E+HS+++R+G++ SL++MY+KC ++ A V
Sbjct: 263 FTLTGLIS---VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKV 319
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLD---FFNHMRQLGVLPDKYTFPCLIKCCCD 146
F+ + E NV ++ A+++G+ ++ F N + Q GV P+ +TF ++K C
Sbjct: 320 FDGMR-EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACAS 378
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ +++HG KLGL +G+ LV+ Y K ME A K F+ L +++V +
Sbjct: 379 LPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVV 438
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
+ + + ++ R + G +S FT +LS +G G +H +VVK+G+
Sbjct: 439 DDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGF 498
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ + V NALI MY K AL++F ME+ ++ +W SI+ + G L LF
Sbjct: 499 RTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYN 558
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAAL 352
ML G +P+ VT+ VL ACSH+ +
Sbjct: 559 MLETGVKPNDVTYIAVLSACSHVGLI 584
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 198/566 (34%), Positives = 300/566 (53%), Gaps = 32/566 (5%)
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+L+ E + ++N M++ + N + + F+ + D ++ L+ +
Sbjct: 224 DLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEW----DAISWNALMAGYVQRSQIE 279
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E +K+ F DV + +V+ Y + M EA ++F+ P+RDV W A+V+GYA
Sbjct: 280 EAQKM----FNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYA 335
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS--- 268
Q G +A VF M + +S MM + R++ K +D+
Sbjct: 336 QNGMLEEAKRVFDAMPDKN----------AVSWNAMMAAYVQRRMME--EAKELFDAMPC 383
Query: 269 -GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
V N ++ Y + + EA IF MM +KD SW +++ + Q G + TL+LF M
Sbjct: 384 RNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEM 443
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G + F+ VL C+ +AAL G Q+H ++ G F+ NAL+
Sbjct: 444 GRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVG--------CFVGNALLA 495
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCGSM +A F +M ++DV SWN MI GY G GKEAL++F M + KPD++T
Sbjct: 496 MYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDIT 555
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
VGVL+ACSHSG + +G + M +GV EHYTC+ID+LGRAG+L+EA L M
Sbjct: 556 LVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM 615
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P E + +W LL ASR+H N++L AA+++F+LEP + G YVL+SNIY + GK+ +V
Sbjct: 616 PFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVD 675
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCC 627
+RH M ++ V+K PG SWIE+++ +HTF D HPE + IYA L L R+++ G
Sbjct: 676 KMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVS 735
Query: 628 AGTLFDSDSTASGFEKHRLYLEEVIA 653
A + D E Y E +A
Sbjct: 736 ATDMVLHDVEEEEKEHMLKYHSEKLA 761
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 121/538 (22%), Positives = 216/538 (40%), Gaps = 79/538 (14%)
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D++V + + +++ + +A ++F +P R +N M+ GYA G +AL FR
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV---------------------HGIV--- 261
+ + F+ +L AL + + R + HG+V
Sbjct: 164 IPRP----DSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLA 219
Query: 262 ---VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
+ + N ++ Y + + EA E+F+ E D SWN++M + Q +
Sbjct: 220 RHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIE 279
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY----------IVVNGLA 368
++F++M Q D+V+++T++ + + R++ +V+G A
Sbjct: 280 EAQKMFNKMP----QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYA 335
Query: 369 KNGSCKDIDDVFMN---------NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
+NG ++ VF NA+M Y + M +A+ +F M ++VASWN M+ G
Sbjct: 336 QNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTG 395
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
Y G EA +F M + D V++ +L+A S GF + + M R G
Sbjct: 396 YAQAGMLDEARAIFGMMPQK----DAVSWAAMLAAYSQIGFSEETLQLFKEM-GRCGEWV 450
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV---VWRTLLAASRLHGNTDLAEIAA 536
+ CV+ L +L + V V LLA G+ + A A
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAF 510
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN--------PGCSWIE 588
+ ++E ++ M Y G +E L++ TMR+ + + + CS
Sbjct: 511 E---EMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSG 567
Query: 589 L-KDGLHTFISSDR-----SHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASG 640
L + G+ F S R + PE + +L RL E + F+ DST G
Sbjct: 568 LVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWG 625
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA L+ G ++HS +++ G +L+ MY KC M+ A F + E +
Sbjct: 459 LSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEME-ERD 517
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIH 157
V ++N MI+G+ + F + L+ F+ MR+ PD T ++ C V + + +
Sbjct: 518 VVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFY 577
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
+ G+ + +++ + ++EA+ + +++P D +W A++ G ++I
Sbjct: 578 SMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALL-GASRI--- 633
Query: 217 HKALEVFRRMSKE 229
H+ E+ R +++
Sbjct: 634 HRNSELGRNAAEK 646
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 324/596 (54%), Gaps = 13/596 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ +++C + +++G+ I + +L + S L TSLI++Y +C + A + ++
Sbjct: 262 TYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM 321
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V +NAM++ N ++ + M G +K T+ +++ C ++ A+ +
Sbjct: 322 Y-QRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQG 380
Query: 154 KKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++IH V GL +V +G++++ Y KC E A+ VFE +P +D V WNA++N
Sbjct: 381 REIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVG 440
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD-SGVP 271
+F ALE+F M EG+ + FT+ +L A + K R +H G+ +
Sbjct: 441 NSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA 500
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLS 329
V N++++MY + + +A + F+ +EEK + +W+ I+ + Q + G + F M +
Sbjct: 501 VGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEA 560
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +P VTF + L AC+ +A L HGR +H +G + + + N +++MY
Sbjct: 561 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVET-------SLVLGNTIINMY 613
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS DA++VF +M +K + SWN +I+ Y +G EAL M PD T V
Sbjct: 614 GKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSV 673
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L SH+G L +G E +G+ P+ C++D+L R G L+ A EL LA P
Sbjct: 674 SILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPA 733
Query: 510 -EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+A+ + W TLLAA + +G+ A+RVF+LEP H G++V+++N+Y + G++ +
Sbjct: 734 CQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASR 793
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR M + +V+K PGCSWIEL +H FIS + HP+ + I +L LT R+RE G
Sbjct: 794 IRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAG 849
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/487 (28%), Positives = 245/487 (50%), Gaps = 9/487 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ +L CA L G++IHS ++ +G+ + + SL+NMY KC + A VF+ +
Sbjct: 62 VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLL 121
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+V ++ AM++ + N + L+ + M GV P++ TF ++ C + + +K
Sbjct: 122 R-DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH + GL+ D +G+ALV+ Y C ++ VF + V+LW M+ G +Q G+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ + L VFR+M EG+ + T ++ + K G ++ +++ + S + +
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI +YG+ + A + E M ++D+ +WN+++T Q G++ + L RM GF +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT+ +VL AC++L AL GR+IH +++ GL + +V + N+++ MY KCG
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQR-------EVAVGNSVITMYGKCGQT 413
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A VF M +KD SWN +I + + ++AL++F M L+ +E T + +L AC
Sbjct: 414 EAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
L R+ + + V++M R G L +A + A E V
Sbjct: 474 GGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKK-AFDSLEEKGLVA 532
Query: 516 WRTLLAA 522
W +LAA
Sbjct: 533 WSIILAA 539
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 235/499 (47%), Gaps = 12/499 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + +CA L G++IH ++ G+ + +L++MY C VF+ +
Sbjct: 161 TFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRM 220
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ +V + MI+G N +GL F M GV ++ T+ +++ C ++ AV E
Sbjct: 221 G-QSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEG 279
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+ I + + + ++L++ Y +C ++ A + E + RDVV WNAMV AQ
Sbjct: 280 EMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQN 339
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPV 272
G+ +A+ + RRM EG ++ T VL A + GR +H V+ G V V
Sbjct: 340 GDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAV 399
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N++I MYGK A+ +FE M KD SWN+++ L LF M G
Sbjct: 400 GNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGL 459
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+ + T ++L AC L L RQIH G N + + N++++MY +C
Sbjct: 460 RSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTA-------VGNSVVNMYARC 512
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGM--DGQGKEALDMFSCMCEAKLKPDEVTFVG 450
GS+ DA+ F + +K + +W+I++ Y DG G+ A F M +KP EVTFV
Sbjct: 513 GSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVS 572
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L AC+ L GR + V ++ +I+M G+ G ++A + MP E
Sbjct: 573 ALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP-E 631
Query: 511 ANPVVWRTLLAASRLHGNT 529
+ W +L+ A +G+
Sbjct: 632 KCLISWNSLIVAYAHNGHA 650
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 239/493 (48%), Gaps = 25/493 (5%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
MY KC ++ AL VF+ +S + NVF++ M++ + N + L+ F M+ G PDK
Sbjct: 1 MYGKCARVTDALMVFDGISAK-NVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKV 59
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL 195
F + C + ++IH V GL ++ I ++LVN Y KCQ + A KVF+ +
Sbjct: 60 VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119
Query: 196 PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR 255
LRDVV W AM+ YAQ G + +ALE RM EG+ ++ T ++ + GR
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179
Query: 256 VVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
+H ++ G + + NAL+ MYG + +F M + + W +++ Q G
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
++ L +F +M G + + VT+ +++ C +L A+ G I I+ + +
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSS----- 294
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ +L+ +Y +CG + A+ + M ++DV +WN M+ +G EA+ +
Sbjct: 295 ---TLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRR 351
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC----VIDML 491
M ++VT++ VL AC++ LSQGRE + +R + ++ VI M
Sbjct: 352 MDMEGFGANKVTYLSVLEACANLEALSQGRE----IHARVLLCGLLQREVAVGNSVITMY 407
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF---QLEPGHCG 548
G+ GQ A + AMP + + V W ++ AS GN+ + A +F +LE
Sbjct: 408 GKCGQTEAAMSVFEAMPRK-DDVSWNAVINASV--GNSKFQD--ALELFHGMELEGLRSN 462
Query: 549 NYVLMSNIYVAGG 561
+ L+S + GG
Sbjct: 463 EFTLLSLLEACGG 475
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 190/571 (33%), Positives = 298/571 (52%), Gaps = 76/571 (13%)
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
F++M G++PD P +IK C + A+ K++H GL LD + S+L++ Y++
Sbjct: 62 FSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQ 121
Query: 182 CQFMEEALKVFEELP-----------------------------LRDV------VLWNAM 206
+++A VF++LP RD+ V WN M
Sbjct: 122 FDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGM 181
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ + G + A+ +F+ M EG+ +V+ VL A+ + G +H V+K G
Sbjct: 182 ISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGL 241
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI------------------------- 301
V++ALIDMYGK C E +F M+E D+
Sbjct: 242 GPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQ 301
Query: 302 --------FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
SW S++ Q G L LF M G +P+ VT +LPAC ++AAL+
Sbjct: 302 FKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALL 361
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
HG+ H + + NG+ +DV++ +AL+DMY KCG M +++ F M +++ SW
Sbjct: 362 HGKAAHCFSLRNGI--------FNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSW 413
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N ++ GY M G+ EA+++F M KPD V+F VLSAC+ G +G + M
Sbjct: 414 NSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+GV +EHY+C++ +LGR+G+L EAY + MP E + VW LL++ R+H DL E
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGE 533
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
IAA+RVF+LEP + GNY+L+SNIY + + EV +R MR + ++KNPG SWIE+K+ +
Sbjct: 534 IAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKV 593
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H ++ D SHP+ I +L LT +++ G
Sbjct: 594 HMLLAGDSSHPQMPQIIEKLAKLTVEMKKSG 624
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 199/617 (32%), Positives = 324/617 (52%), Gaps = 24/617 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ A ++L+ G ++H+ +++ G + +LI+MY+KC ++ A VF+ + E N
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP-ERN 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A++ GF + A + L F MR G P+++T +K C +IHG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G + + ++LV Y K ++ +A +VF+ +P R++ WN+M++GYA G+
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 219 ALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNA 275
+L VFR M + FT +L A +G + G VH + G S + A
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+D+Y K + A+++F+ +E ++ W +++ H Q G + LF R S+G + D
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSCKDIDDVFMNNALMDMYTKCG 393
S+V+ + A + G+Q+H Y GL DV + N+L+DMY KCG
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL----------DVSVANSLVDMYLKCG 357
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+A F +M ++V SW MI G G G G+EA+D+F M E ++ DEV ++ +LS
Sbjct: 358 LTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLS 417
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG + + R + + + P EHY C++D+LGRAG+L EA EL L+MP E
Sbjct: 418 ACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTV 477
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW+TLL+A R+H + + + ++ + NYV++SNI G++ E IR M
Sbjct: 478 GVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAM 537
Query: 574 RQQNVRKNPGCSWIELKDGLHTFI-SSDRSHPEAKSIYAELHSLTARLREH----GDC-C 627
R++ +RK GCSW E+ +H F D +HP+A I L + AR+RE GD C
Sbjct: 538 RRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARC 597
Query: 628 AGTLFDSDSTASGFEKH 644
A D +S +H
Sbjct: 598 ALHDVDEESRVESLREH 614
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R + +L A + G +H ++K+G+ S + N LIDMY K + A E+F+
Sbjct: 4 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M E+++ SW ++M G LRLF M +G P+ T S L AC
Sbjct: 64 GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRA 121
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G QIHG V G + DV + N+L+ MY+K DA+ VF + +++A+WN
Sbjct: 122 GVQIHGVCVRTGFEGH-------DV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWN 173
Query: 415 IMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI GY GQG+++L +F M +PDE TF +L ACS G +G + M
Sbjct: 174 SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAV 233
Query: 474 RYGVVPT 480
R GV P
Sbjct: 234 R-GVSPA 239
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 313/592 (52%), Gaps = 56/592 (9%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCC---QMKYALFVFNNLSC 95
+ L + T L + +IH+ +++T + + + L+ C + YA VF+ +
Sbjct: 7 MSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP- 65
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLEVK 154
P+ F +N MI + ++ + + F MR +P D Y+ +I+ C + +
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
K+H V K+GL D+++ +AL+ Y K +E A + +E+ D+V +N ++ Y ++G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185
Query: 215 EFHKALEVFRRMSKEGI--WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
E + A ++F RM + + W
Sbjct: 186 EINLAHDLFDRMPERDLVSW---------------------------------------- 205
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N +I + VG A ++F+ E+D+ SW+S++ + + + LRLF M A
Sbjct: 206 -NTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANV 264
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD VT +VL AC + AL G+ IH I N + D+ + +L+DMY KC
Sbjct: 265 LPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEI--------DLKLGTSLVDMYAKC 316
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + ++ VF M+ +DV +W+ MI+G G G+ ALD FS M +KP++VTF+GVL
Sbjct: 317 GDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVL 376
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSH G + +G + M Y V P IEHY CV+D+LGRAG+L EA EL +MP +
Sbjct: 377 SACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPD 436
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+VWR LL A R++ N ++AE A + +LEP GNYVL+SNIY ++++V+++R
Sbjct: 437 AIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRM 496
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ N++K PG S IE+ + +H F++ D+SHPE+K I L +TARL+ +G
Sbjct: 497 MKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRMLSEITARLKANG 548
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 307/544 (56%), Gaps = 14/544 (2%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
++K AL + + + +P+ Y+ +I + +G H++ G +P + L+
Sbjct: 54 RLKEALQILHQID-KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLL 112
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
+ ++++ +K+ F + D+ + L++ Y K ++EA +F+++P RD
Sbjct: 113 EMYAKCDSLMDSQKL----FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNF 168
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS-RFTVTGVLSALIMMGFFKNGRVVHGI 260
W AM++GY + ++ALE+FR M + S +FTV+ L+A + + G+ +HG
Sbjct: 169 SWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGY 228
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+++ G DS V +AL DMYGK + EA IF+ M ++DI +W +++ + Q G
Sbjct: 229 IMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEG 288
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
LF +L +G +P+ TFS VL AC++ + G+++HGY+ G F
Sbjct: 289 FDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS--------F 340
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+AL+ MY+KCG+M A+ VF + + D+ SW +I GY +GQ EA+ F + ++
Sbjct: 341 AASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSG 400
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+PD +TFVGVLSAC+H+G + +G ++ ++ +YG+ T +HY C+ID+L R+GQ +EA
Sbjct: 401 TQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEA 460
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
+ M + + +W +LL R+HGN LA+ AA+ +F++EP + YV ++NIY
Sbjct: 461 ENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATA 520
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
G + EV IR TM + V K PG SWI +K +H F+ D SHP++K I L L+ R+
Sbjct: 521 GMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRM 580
Query: 621 REHG 624
+E G
Sbjct: 581 KEEG 584
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 227/477 (47%), Gaps = 51/477 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
+Q C LQ+G+++H ++ +G + + L+ MY+KC + + +F+ +
Sbjct: 77 IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDL 136
Query: 95 CEPNV--------------------------FTYNAMISGFYSNDFAFKGLDFFNHM-RQ 127
C N+ F++ AMISG+ +D + L+ F M R
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRS 196
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+K+T + V + K+IHG + + GLD D + SAL + Y KC +EE
Sbjct: 197 DNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEE 256
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+++ RD+V W AM++ Y Q G + ++F + + GI + FT +GVL+A
Sbjct: 257 ARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACAN 316
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ G+ VHG + ++G+D +AL+ MY K + A +F+ + D+FSW S+
Sbjct: 317 QTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSL 376
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ-IHGYIVVNG 366
+ + Q G D +R F+ ++ +G QPD +TF VL AC+H + G H G
Sbjct: 377 IAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYG 436
Query: 367 L---AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGM 422
L A + +C ++D+ + G +A+ + +KMS K D W ++ G +
Sbjct: 437 LTHTADHYAC-----------IIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRI 485
Query: 423 DGQGKEALDMFSCMCEAKLKPDE-VTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
G K A + E ++P+ T+V + + + +G S+ + M+ R GVV
Sbjct: 486 HGNLKLAQRAAEALFE--IEPENPATYVTLANIYATAGMWSEVAKIRKTMDDR-GVV 539
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 197/597 (32%), Positives = 332/597 (55%), Gaps = 16/597 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CAH + G+++ ++ + S + ++M+SK + A +FN +
Sbjct: 303 TYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLI 362
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + V ++NA++ G N+ + + M GV PD+ +F +I C ++ A
Sbjct: 363 TYKDTV-SWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETG 421
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+IH L K + + +GS+L++ Y K +E KV ++ +V N ++ G Q
Sbjct: 422 KQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQN 481
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY---DSGV 270
+A+++F+++ ++G+ S FT + +LS + G+ VH +K G+ D+ V
Sbjct: 482 NREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSV 541
Query: 271 PVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+ Y K + +A ++ EM + K++ W +I++ + Q G +L F RM S
Sbjct: 542 GV--SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRS 599
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
PD VTF+++L ACS + AL G++IHG I+ +G GS K +A++DMY
Sbjct: 600 YDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGF---GSYKT-----ATSAIIDMY 651
Query: 390 TKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
+KCG + + F ++ SK+D+ WN MILG+ +G EAL +F M ++++K DEVTF
Sbjct: 652 SKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTF 711
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+GVL AC+H+G +S+GR + M YG++P ++HY C ID+LGR G L EA E+ +P
Sbjct: 712 LGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELP 771
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ V+W T LAA R+H + + EIAA+ + +LEP + YVL+SN+Y A G + E
Sbjct: 772 FRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKM 831
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
R MR++ K PGCSWI + + F+ D++H A IY L +LT + ++ D
Sbjct: 832 AREAMREKGATKFPGCSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMMHKYDD 888
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 256/511 (50%), Gaps = 12/511 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T + L A+ T +G+++H+ +R G+ + +SLIN+Y+KC + A+ VF
Sbjct: 199 TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVF 258
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ S E NV +NAM++G N++ + + F +M++LG+ D++T+ ++ C + +
Sbjct: 259 -DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSH 317
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+++ + K +D +++ +A ++ + K +++A +F + +D V WNA++ G
Sbjct: 318 CLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGL 377
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
E +A+ + + M+ +G+ + V++A + + G+ +H + +K S
Sbjct: 378 THNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNH 437
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V ++LID Y K V ++ ++ I N ++ Q D + LF ++L
Sbjct: 438 AVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRD 497
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P TFS++L C+ L + + G+Q+H Y + +G DD + +L+ Y
Sbjct: 498 GLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLN-------DDTSVGVSLVGTYL 550
Query: 391 KCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
K DA + +M K++ W ++ GY +G ++L F M + PDEVTF
Sbjct: 551 KARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFA 610
Query: 450 GVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+L ACS LS G+E L ++S +G T + +IDM + G + ++E +
Sbjct: 611 SILKACSEMTALSDGKEIHGLIIKSGFGSYKTAT--SAIIDMYSKCGDIISSFEAFKELK 668
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
++ + +W +++ +G D A + Q++
Sbjct: 669 SKQDITLWNSMILGFAKNGYADEALLLFQKM 699
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 246/513 (47%), Gaps = 52/513 (10%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
S+G F LA A+L C+ L G++ H + G+ +L+NMY++
Sbjct: 22 SAGGGVRPDQFDLA---ATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYAR 78
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C ++ A VF +S P+ + +MISG++ + + F M ++G PD+ T
Sbjct: 79 CGRVGDARRVFGGISL-PDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVT--- 134
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-R 198
C V A+ + + +E+A + +P
Sbjct: 135 ---CVAVVCALTALGR-----------------------------LEDARTLLHRMPAPS 162
Query: 199 DVVLWNAMVNGYA-QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
V WNA+++GYA Q G H+ +++ M G+W +R T +LSA F GR V
Sbjct: 163 STVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQV 222
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H V+ G D+ V V ++LI++Y K C+G+A+ +F+ EK++ WN+++ +
Sbjct: 223 HAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQ 282
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+++F M G + D T+ +VL AC+HL + GRQ+ + N C D
Sbjct: 283 VEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKN-------CMDA- 334
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+F+ NA +DM++K G++ DA+ +F ++ KD SWN +++G + + +EA+ M M
Sbjct: 335 SLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMN 394
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
+ PDEV+F V++ACS+ G++ + + ++ + + +ID + G +
Sbjct: 395 LDGVTPDEVSFATVINACSNIRATETGKQ-IHCLAMKHSICSNHAVGSSLIDFYSKHGDV 453
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
E+ LA +A+ +V R +L A + N +
Sbjct: 454 -ESCRKVLAQV-DASSIVPRNVLIAGLVQNNRE 484
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 244/500 (48%), Gaps = 20/500 (4%)
Query: 35 CIASLQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C AS+ H+ Q+ + + M + G ++ +++ + +++ A + + +
Sbjct: 99 CWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTLLHRM 158
Query: 94 SCEPNVFTYNAMISGFYSND-FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +NA+ISG+ + + MR G+ P + TF ++ + A +E
Sbjct: 159 PAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIE 218
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+++H + GLD +V++GS+L+N Y KC + +A+ VF+ ++VV+WNAM+NG +
Sbjct: 219 GRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVR 278
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+A+++F M + G+ FT VL A + GR V + +K D+ + V
Sbjct: 279 NEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFV 338
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NA +DM+ K + +A +F ++ KD SWN+++ + + + M G
Sbjct: 339 ANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGV 398
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
PD V+F+TV+ ACS++ A G+QIH + + + N + + ++L+D Y+K
Sbjct: 399 TPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHA--------VGSSLIDFYSKH 450
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + + V ++ + N++I G + + EA+D+F + LKP TF +L
Sbjct: 451 GDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSIL 510
Query: 453 SACSHSGFLSQ--GREFLPLMESRYGVVPTIEHYTCVIDMLG---RAGQLNEAYELALAM 507
S C +G LS G++ + + G + + + + ++G +A +A +L + M
Sbjct: 511 SGC--TGLLSSIIGKQ-VHCYTLKSGFLN--DDTSVGVSLVGTYLKARMPEDANKLLIEM 565
Query: 508 PNEANPVVWRTLLAASRLHG 527
P+ N V W +++ +G
Sbjct: 566 PDHKNLVEWTAIVSGYAQNG 585
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 188/406 (46%), Gaps = 47/406 (11%)
Query: 119 LDFFNHMRQL----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
LD F R+ GV PD++ + C + A++ K+ H K GL + +A
Sbjct: 12 LDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAA 71
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMS 234
LVN Y +C + +A +VF + L D V W +M++GY + G F +A+ +F RM K G
Sbjct: 72 LVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPD 131
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R T V+ AL +G ++ R ++ +M S NA+I Y + G E+F
Sbjct: 132 RVTCVAVVCALTALGRLEDART---LLHRMPAPSSTVAWNAVISGYAQQS--GIEHEVFG 186
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+ KD+ W G P TF+++L A ++ A +
Sbjct: 187 LY--KDMRCW--------------------------GLWPTRSTFASMLSAAANATAFIE 218
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
GRQ+H V +GL N VF+ ++L+++Y KCG + DA +VF +K+V WN
Sbjct: 219 GRQVHAAAVRHGLDAN--------VFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWN 270
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
M+ G + EA+ MF M L+ DE T+V VL AC+H GR+ + + +
Sbjct: 271 AMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQ-VQCVTIK 329
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ ++ +DM + G +++A L + + V W LL
Sbjct: 330 NCMDASLFVANATLDMHSKFGAIDDAKTL-FNLITYKDTVSWNALL 374
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/599 (30%), Positives = 333/599 (55%), Gaps = 17/599 (2%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F +PF + + C +L +G+ +H ++++G+ SLI MY+K ++
Sbjct: 126 NFTYPFVI-------KACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF + ++ ++N+MISG+ S ++ L F M+ G+ D+++ ++ C
Sbjct: 179 SAEMVFREMPVR-DLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ K+IH + + L+LDV + ++LV+ Y KC M+ A ++F+++ + +V WN
Sbjct: 238 SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWN 297
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
AM+ GY+ + ++ R+M + G + T+ +L + G+ VHG ++
Sbjct: 298 AMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIR 357
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G+ + + AL+DMYG+ + A +F M E+++ SWN+++ + + G + + L
Sbjct: 358 NGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTL 417
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F + + +PD T +++LPA + LA+L QIHGY+ L N F++N
Sbjct: 418 FQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSN--------TFVSN 469
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+++ MY KCG++ A+ +F +M+ KDV SWN +I+ Y + G G+ ++++FS M E +P
Sbjct: 470 SIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEP 529
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ TFV +L +CS +G +++G E+ M+ Y + P IEHY C++D++GR G L+ A
Sbjct: 530 NGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNF 589
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
MP +W +LL ASR G+ +LAEIAA+ + LE + G YVL+SN+Y G++
Sbjct: 590 IEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRW 649
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
E+V I+ M+++ + K+ GCS ++L F++ DRS E +Y L ++ ++ E
Sbjct: 650 EDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/527 (30%), Positives = 275/527 (52%), Gaps = 28/527 (5%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
+ +S+T ++ Y + MK AL +F N+ + + F +N MI GF N + +DF++ M
Sbjct: 59 NSVSLTRALSSYVERGYMKNALDLFENMR-QCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
GV D +T+P +IK C + + E +++HG V K GLDLD+YIG++L+ Y K +
Sbjct: 118 EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCI 177
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
E A VF E+P+RD+V WN+M++GY +G+ ++L FR M GI + RF+V G+L A
Sbjct: 178 ESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ GF +NG+ +H +++ + V V +L+DMY K + A +F+ + +K I +WN
Sbjct: 238 SLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWN 297
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
+++ + + +M G PD +T +LP C+ L A++ G+ +HG+ +
Sbjct: 298 AMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIR 357
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
NG + + + AL+DMY +CG ++ A+ +F +M+++++ SWN MI Y +G
Sbjct: 358 NGF--------LPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNG 409
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
+ ++A+ +F +C LKPD T +L A + L + E +G V ++
Sbjct: 410 ENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREA-------EQIHGYVTKLKLD 462
Query: 485 T------CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH--GNTDLAEIAA 536
+ ++ M G+ G L A E+ M + + + W T++ A +H G + +
Sbjct: 463 SNTFVSNSIVFMYGKCGNLLRAREIFDRMTFK-DVISWNTVIMAYAIHGFGRISIELFSE 521
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
R EP L+ + VAG E R N+ NPG
Sbjct: 522 MREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNI--NPG 566
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 200/594 (33%), Positives = 318/594 (53%), Gaps = 16/594 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPL-SITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ CA L +G+ HS +R G+ + + + SL+ Y++ + A VF+ +
Sbjct: 115 LKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR- 173
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQ-LGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V T+N+M+ G+ SN L F M + L V D + CC A+++ +++
Sbjct: 174 DVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREV 233
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V + G++ DV +G+++++ Y KC + A VF +P R VV WN M+ GYA
Sbjct: 234 HAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERP 293
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A + F +M EG + T +L+A GR VHG + + + V + AL
Sbjct: 294 EEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETAL 353
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++MY K V + ++F M K + SWN+++ + + + LF +L+ PD
Sbjct: 354 LEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDY 413
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S V+PA L L RQ+H YI+ G +N + NA+M MY +CG +
Sbjct: 414 FTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGEN--------TLIMNAIMHMYARCGDVL 465
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
++ +F KM+ KDV SWN MI+GY + GQG+ AL+MFS M L+P+E TFV VL+ACS
Sbjct: 466 SSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
SG +G M+ YG++P IEHY C+ D+LGRAG L E + MP + VW
Sbjct: 526 VSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVW 585
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGH-----CGNYVLMSNIYVAGGKYEEVLDIRH 571
+LL ASR + D+AE AA+R+FQLE G YVL+S++Y G++++V I+
Sbjct: 586 GSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKS 645
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
M ++ +R+ S +EL +F++ D +HP++K I + L+ ++ E D
Sbjct: 646 LMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIGEMRD 699
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 205/433 (47%), Gaps = 12/433 (2%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ F +N +I G L + M G PD++TFP ++KCC + A+ E + H
Sbjct: 72 DAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARPDRFTFPVVLKCCARLGALDEGRAAH 131
Query: 158 GLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
+LG+ DVY G++L+ Y + +++A +VF+ +P RDVV WN+MV+GY G
Sbjct: 132 SAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLG 191
Query: 217 HKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
AL FR M + + + L+A + GR VH V++ G + V V +
Sbjct: 192 TLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTS 251
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++DMY K + A +F M + + +WN ++ + + F +M + G Q +
Sbjct: 252 ILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVE 311
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
+VT +L AC+ + ++GR +HGYI + V + AL++MY+K G +
Sbjct: 312 VVTAINLLAACAQTESSLYGRSVHGYITRRQF--------LPHVVLETALLEMYSKVGKV 363
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ ++ VF +M+ K + SWN MI Y EA+ +F + L PD T V+ A
Sbjct: 364 KSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAF 423
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
G L Q R+ + R G ++ M R G + + E+ M + + +
Sbjct: 424 VLLGLLRQCRQMHSYI-IRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAK-DVIS 481
Query: 516 WRTLLAASRLHGN 528
W T++ +HG
Sbjct: 482 WNTMIMGYAIHGQ 494
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
IA+L C ++ L +G+E+H+Y++R G+ TS+++MY KC + A VF +
Sbjct: 215 IAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPS 274
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
V T+N MI G+ N+ + D F M+ G + T L+ C + L +
Sbjct: 275 R-TVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRS 333
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
+HG + + V + +AL+ Y K ++ + KVF ++ + +V WN M+ Y
Sbjct: 334 VHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEM 393
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ +A+ +F + + ++ FT++ V+ A +++G + R +H ++++GY +MNA
Sbjct: 394 YMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNA 453
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
++ MY + V + EIF+ M KD+ SWN+++ + G L +F M G +P+
Sbjct: 454 IMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPN 513
Query: 336 LVTFSTVLPACS 347
TF +VL ACS
Sbjct: 514 ESTFVSVLTACS 525
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 16/353 (4%)
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+LV ++ M++A + RD L N ++ G A G AL + M G
Sbjct: 47 SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG-VPVMNALIDMYGKGKCVGEALEI 292
RFT VL +G GR H +++G + V N+L+ Y + V +A +
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL--FDRMLSA-GFQPDLVTFSTVLPACSHL 349
F+ M +D+ +WNS+ V N GTL L F M A Q D V L AC
Sbjct: 167 FDGMPARDVVTWNSM--VDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLE 224
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
+ALM GR++H Y++ +G+ DV + +++DMY KCG + A+ VF M +
Sbjct: 225 SALMQGREVHAYVIRHGMEH--------DVKVGTSILDMYCKCGDIASAEGVFATMPSRT 276
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V +WN MI GY ++ + +EA D F M + + VT + +L+AC+ + GR
Sbjct: 277 VVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHG 336
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ +R +P + T +++M + G++ + E V W ++AA
Sbjct: 337 YI-TRRQFLPHVVLETALLEMYSKVGKVKSS-EKVFGQMTTKTLVSWNNMIAA 387
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 136/287 (47%), Gaps = 9/287 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H + T I L CA + G+ +H Y+ R + + T+L+ MYSK ++K +
Sbjct: 308 HQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSE 367
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF ++ + + ++N MI+ + + + + F + + PD +T ++ +
Sbjct: 368 KVFGQMTTK-TLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLL 426
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + +++H + +LG + I +A+++ Y +C + + ++F+++ +DV+ WN M+
Sbjct: 427 GLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMI 486
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GYA G+ ALE+F M G+ + T VL+A + G G M D
Sbjct: 487 MGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFN---SMQRD 543
Query: 268 SG-VPVMN---ALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMT 309
G +P + + D+ G+ + E ++ E M F W S++T
Sbjct: 544 YGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLT 590
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 98/201 (48%), Gaps = 10/201 (4%)
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD TF VL C+ L AL GR H + G+A DV+ N+L+ Y +
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAA-------DVYTGNSLLAFYARL 157
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGV 451
G + DA+ VF M +DV +WN M+ GY +G G AL F M EA +++ D V +
Sbjct: 158 GLVDDAERVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAA 217
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L+AC L QGRE + R+G+ ++ T ++DM + G + A + MP+
Sbjct: 218 LAACCLESALMQGREVHAYV-IRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSR- 275
Query: 512 NPVVWRTLLAASRLHGNTDLA 532
V W ++ L+ + A
Sbjct: 276 TVVTWNCMIGGYALNERPEEA 296
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 281/508 (55%), Gaps = 41/508 (8%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVN--TYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++K++H + + GL Y+ + L+ T + L VF ++ + LW AM+ G
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDS 268
YA G ++ + RM ++G+ FT + + A G+ VH + +G + S
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--- 325
+ V N++ID+Y K +G A ++F+ M E+D+ SW ++ + + G+ + LFD
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 326 ----------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+M G + D VT + V+ AC+ L A+ H
Sbjct: 237 LKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
I +G +G +V + +AL+DMY+KCGS +A VF M +++V S++ MI
Sbjct: 297 IRDIAERSGFGPSG------NVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
LGY M G+ AL +F M + +++P++VTF+G+LSACSH+G + QGR+ ME +GV
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P+ +HY C++D+LGRAG L EA +L MP E N VW LL A R+HGN D+A+IAA
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG-LHTF 596
+F+LEP GNY+L+SNIY + G++EEV +R +R++ +KNPGCSW E K+G +H F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
+ D +HP + I L L RLR HG
Sbjct: 531 FAGDTTHPRSSEIRQALKQLIERLRSHG 558
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 37/343 (10%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+++H++++R G+ +T LI M +K Y L VF ++ PN F + AMI G+
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN-YPNPFLWTAMIRGY 117
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL-GLDLD 168
+ +F+ MR+ GV P +TF L K C + + K++H + G D
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 169 VYIGSALVNTYLKCQF-------------------------------MEEALKVFEELPL 197
+Y+G+++++ Y+KC F ME A +F++LPL
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPL 237
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
+D+V W AMV GYAQ G +ALE F++M G+ T+ GV+SA +G K+ +
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 258 HGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
I + G+ V V +ALIDMY K EA ++FE+M+E+++FS++S++ + G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
L+LF ML +P+ VTF +L ACSH + GRQ+
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 180/508 (35%), Positives = 281/508 (55%), Gaps = 41/508 (8%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVN--TYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++K++H + + GL Y+ + L+ T + L VF ++ + LW AM+ G
Sbjct: 57 QIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRG 116
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDS 268
YA G ++ + RM ++G+ FT + + A G+ VH + +G + S
Sbjct: 117 YALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFAS 176
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD--- 325
+ V N++ID+Y K +G A ++F+ M E+D+ SW ++ + + G+ + LFD
Sbjct: 177 DLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLP 236
Query: 326 ----------------------------RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+M G + D VT + V+ AC+ L A+ H
Sbjct: 237 SKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANW 296
Query: 358 IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMI 417
I +G +G +V + +AL+DMY+KCGS +A VF M +++V S++ MI
Sbjct: 297 IRDIAERSGFGPSG------NVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMI 350
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
LGY M G+ AL +F M + +++P++VTF+G+LSACSH+G + QGR+ ME +GV
Sbjct: 351 LGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGV 410
Query: 478 VPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQ 537
P+ +HY C++D+LGRAG L EA +L MP E N VW LL A R+HGN D+A+IAA
Sbjct: 411 APSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAAN 470
Query: 538 RVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG-LHTF 596
+F+LEP GNY+L+SNIY + G++EEV +R +R++ +KNPGCSW E K+G +H F
Sbjct: 471 ELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDF 530
Query: 597 ISSDRSHPEAKSIYAELHSLTARLREHG 624
+ D +HP + I L L RLR HG
Sbjct: 531 FAGDTTHPRSSEIRQALKQLIERLRSHG 558
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 175/343 (51%), Gaps = 37/343 (10%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKC--CQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+++H++++R G+ +T LI M +K Y L VF ++ PN F + AMI G+
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN-YPNPFLWTAMIRGY 117
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKL-GLDLD 168
+ +F+ MR+ GV P +TF L K C + + K++H + G D
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 169 VYIGSALVNTYLKCQF-------------------------------MEEALKVFEELPL 197
+Y+G+++++ Y+KC F ME A +F++LP
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPS 237
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
+D+V W AMV GYAQ G +ALE F++M G+ T+ GV+SA +G K+ +
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 258 HGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
I + G+ V V +ALIDMY K EA ++FE+M+E+++FS++S++ + G
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
L+LF ML +P+ VTF +L ACSH + GRQ+
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQL 400
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 186/627 (29%), Positives = 322/627 (51%), Gaps = 43/627 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
L + + L C G +IH++ + +G+ + L+ YS + A +
Sbjct: 43 VLHSAASLLSACVDVLAFVPGLQIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSIN 102
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N S + +N +I+ + N+ + + + M G+ PD +T+P ++K C + + V
Sbjct: 103 EN-SDILHPLPWNVLIASYAKNELFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 161
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ +HG + +Y+ +AL++ Y + + A ++F+ + RD V WNA++N Y
Sbjct: 162 ASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCY 221
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGV----------------------------- 241
A +G + +A E+F +M G+ +S T +
Sbjct: 222 ASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDP 281
Query: 242 ------LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
L A ++G + G+ +HG+ + YD V N LI MY K + A +F+
Sbjct: 282 VAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQK 341
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
EE + +WNSI++ + Q + L ML AGFQP+ +T +++LP C+ +A L HG
Sbjct: 342 TEENSLCTWNSIISGYAQVNKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHG 401
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
++ H YI+ K D + N+L+D+Y K G + A+ V MS+ D ++
Sbjct: 402 KEFHCYILRRKCFK-------DYTMLWNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTS 454
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
+I GYG G+G+ AL +F M + +KPD VT V VLSACSHS + +G+ M+ +Y
Sbjct: 455 LIDGYGNQGEGRVALALFDEMIRSGIKPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKY 514
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
G+ P ++H++C++D+ GRAG L +A ++ MP E + W TLL A +HGNT++ + A
Sbjct: 515 GIRPCLQHFSCMVDLYGRAGFLAKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWA 574
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++ +++P + G YVL++N+Y G + ++ ++R MR VRK+PGC+WI G
Sbjct: 575 AEKLLEMKPENPGYYVLIANMYATAGSWSKLAEVRTIMRDLGVRKDPGCAWINTDSGFSL 634
Query: 596 FISSDRSHPEAKSIYAELHSLTARLRE 622
F D S+P+A Y L L +++
Sbjct: 635 FSVGDTSNPQACDTYPLLDGLNQLMKD 661
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 188/555 (33%), Positives = 298/555 (53%), Gaps = 10/555 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C + G +H ++ G D + SL++MY+K ++ A VF +
Sbjct: 139 ALKACIRSADYGYGTRLHCDAVKVGGADG-FVMNSLVDMYAKAGDLECARKVFERIPGR- 196
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ +M+SG N FA GL FN MRQ V P +YT +I C ++ + + + +H
Sbjct: 197 NVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMH 256
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G V K GL + +I +AL++ Y+KC +E+A VF+EL D+VLW M+ GY Q G
Sbjct: 257 GSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPL 316
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
AL +F I + T+ VLSA + GR +HGI VK+G V+NAL+
Sbjct: 317 DALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALV 376
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + V EA IF + KD+ +WNS+++ + + + L LF +M G PD +
Sbjct: 377 DMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAI 436
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ L A L L+ G+ HGY V + N ++++ AL+++Y KCG +
Sbjct: 437 SVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN--------IYVSTALLNLYNKCGDLPS 488
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF +M+ ++ +W MI GYGM G ++D+F M + + P++V F +LS CSH
Sbjct: 489 ARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSH 548
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
+G ++ + + M + + P+++HY C++D+L RAG L EA E MP +A+ VW
Sbjct: 549 TGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWG 608
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
L LH E A +R+ L P YVL+SN+Y + G +E+ IR M+++
Sbjct: 609 AFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKG 668
Query: 578 VRKNPGCSWIELKDG 592
+ K PG S I ++G
Sbjct: 669 LVKLPGYSSIGRENG 683
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+T+AT I + C+ L +G+ +H +++ G++ + +L++MY KC +++ A V
Sbjct: 234 YTIATVITA---CSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCV 290
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ LS ++ + MI G+ N L F + ++P+ T ++ +
Sbjct: 291 FDELS-YIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRD 349
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + IHG+ KLGL + +ALV+ Y KCQ + EA ++F + +DVV WN+M++G
Sbjct: 350 LSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSG 409
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA+ + AL +F++MS +G +V LSA + +G G+ HG VK + S
Sbjct: 410 YAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN 469
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V AL+++Y K + A +F+ M +++ +W +++ + G+ G++ LF ML
Sbjct: 470 IYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLK 529
Query: 330 AGFQPDLVTFSTVLPACSH 348
G P+ V F+++L CSH
Sbjct: 530 DGVHPNDVAFTSILSTCSH 548
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 172/487 (35%), Positives = 282/487 (57%), Gaps = 11/487 (2%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+K C + + E K IH L+ D+ + + L+N Y KC + A K+F+E+ RD
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK--NGRVV 257
VV W A++ GY+Q AL + M + G+ ++FT+ +L A +G GR +
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQL 140
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
HG+ ++ GYDS V V A++DMY + + EA IF++M K+ SWN+++ + + G
Sbjct: 141 HGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQG 200
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
D LF ML +P T+S+VL AC+ + +L G+ +H ++ G +
Sbjct: 201 DKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWG--------EKL 252
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
F+ N L+DMY K GS+ DA+ VF +++K+DV SWN M+ GY G GK AL F M
Sbjct: 253 VAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEML 312
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
++ P+++TF+ VL+ACSH+G L +GR + +M+ +Y V P I HY ++D+LGRAG L
Sbjct: 313 RTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMK-KYNVEPQISHYVTMVDLLGRAGHL 371
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
+ A + MP + VW LL A R+H N +L AA+ +F+L+ + G +VL+ NIY
Sbjct: 372 DRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIY 431
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G++ + +R M++ V+K P CSW+E+++ +H F++ D +HP+ + I+ ++
Sbjct: 432 ALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQIS 491
Query: 618 ARLREHG 624
+++E G
Sbjct: 492 DKIKEIG 498
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 187/337 (55%), Gaps = 3/337 (0%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
Q N+ C L+ C H L +G+ IH+ +L + D + +L+N+Y+KC
Sbjct: 6 QQCKNNAGAREICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGD 65
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA +F+ +S +V T+ A+I+G+ +D L M ++G+ P+++T L+K
Sbjct: 66 LVYARKLFDEMSSR-DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLK 124
Query: 143 CCCDVMA--VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
V + VL+ +++HGL + G D +VY+ A+++ Y +C +EEA +F+ + ++
Sbjct: 125 AASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNE 184
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V WNA++ GYA+ G+ KA +F M +E + + FT + VL A MG + G+ VH +
Sbjct: 185 VSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHAL 244
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++K G V N L+DMY K + +A ++F+ + ++D+ SWNS++T + Q G
Sbjct: 245 MIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVA 304
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
L+ F+ ML P+ +TF VL ACSH L GR
Sbjct: 305 LQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRH 341
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 143/281 (50%), Gaps = 5/281 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTLA+ + + T++ +G+++H LR G + ++++MY++C ++ A +
Sbjct: 117 FTLASLLKAASGVG-STDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLI 175
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + N ++NA+I+G+ K F++M + V P +T+ ++ C C M
Sbjct: 176 FD-VMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVL-CACASMG 233
Query: 150 VLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
LE K +H L+ K G L ++G+ L++ Y K +E+A KVF+ L RDVV WN+M+
Sbjct: 234 SLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLT 293
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+Q G AL+ F M + I + T VL+A G GR ++ K +
Sbjct: 294 GYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEP 353
Query: 269 GVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIM 308
+ ++D+ G+ + A++ I EM + W +++
Sbjct: 354 QISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T+L C+HL L G+ IH ++ + + DD+ M N L+++Y KCG + A+
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLL--------NSRFRDDLVMQNTLLNLYAKCGDLVYARK 71
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F +MS +DV +W +I GY + ++AL + M LKP++ T +L A S G
Sbjct: 72 LFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGS 131
Query: 461 LS--QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
QGR+ L RYG + ++DM R L EA +L + N V W
Sbjct: 132 TDVLQGRQLHGLC-LRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNA 189
Query: 519 LLAASRLHGNTDLA 532
L+A G D A
Sbjct: 190 LIAGYARKGQGDKA 203
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 204/607 (33%), Positives = 310/607 (51%), Gaps = 67/607 (11%)
Query: 18 STSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMY 77
+T+ TF FT A+ + + G+ H+ ++ +SL+NMY
Sbjct: 103 NTAPNAHTFAGVFTAASTL---------VDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY 153
Query: 78 SKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF 137
K A VF+ + E N ++ MISG+ S A + L F MR+ +++ F
Sbjct: 154 CKAGLTPEARKVFDTMP-ERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVF 212
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
++ V K+IH + K GL V +G+ALV Y KC +++AL+ FE
Sbjct: 213 TSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSD 272
Query: 198 RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
++ + W+AM+ G AQ G+ KAL++F M GI S FT GV++A +G G+ V
Sbjct: 273 KNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQV 332
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H ++K+G++S + VM AL+DMY K + +A + F+ ++E DI W S++ + Q G +
Sbjct: 333 HDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGEN 392
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L L+ RM G P+ +T ++VL ACS LAAL G+QIH V G
Sbjct: 393 EDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGL-------- 444
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+V + +AL MY KCG ++D +VF +M +DV SWN MI G +G GKEAL++F M
Sbjct: 445 EVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ 504
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
KPD VTFV +LSACSH G + +G + +M +G+ P +EHY C++D+L RAG+L
Sbjct: 505 LEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKL 564
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
EA E T+ A I
Sbjct: 565 KEAIEF-------------------------TESATIDH--------------------- 578
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G +E+V +R M+ + V K PGCSWIELK G+H F+ D+ HP+ I+ EL L+
Sbjct: 579 ---GMWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLS 635
Query: 618 ARLREHG 624
++++ G
Sbjct: 636 KQMKDEG 642
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 314/596 (52%), Gaps = 17/596 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T+ + ++ CA+ +L+ G+ IH+++LR G + SL+ MY KC ++ A
Sbjct: 7 PITVPLYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATA 66
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF ++ E F +N +I+ + + + + M GV P+ T ++ C ++
Sbjct: 67 VFELVARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLE 126
Query: 149 AVLEVKKIH--------GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
+ ++IH ++ + +D + +ALV Y +C + +A VFE + RD+
Sbjct: 127 DLKTGREIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDL 186
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
WNAMV Y++ G+ +A+ V RRM+ EG+ T G+LS +G R +H
Sbjct: 187 AAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAH 246
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
++ G +S V L+ MYG+ +G A+ F+ + +KDI +WN+++ + Q G+ +
Sbjct: 247 ILATGLESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDS 306
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
+R++ M G + D VT VL ACS LA R +H IV G+ DV
Sbjct: 307 IRIYHVMDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVDTGVEL--------DVV 358
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ AL++ Y + G + DA +VF +M +++VA+W+ M+ Y G +L+M+ M
Sbjct: 359 LGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQG 418
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
L+P+ +T+V +L AC+H+G L G ++ M YG+ EH +C++D+LGR+G+L+EA
Sbjct: 419 LRPNYITYVSILFACNHAGLLDHGLDYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEA 478
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
L ++P W LL A R HG+ + A+R FQ+E G YV +SN+Y
Sbjct: 479 EALMASVPYRLGISAWMCLLGACRTHGDVERGARVARRAFQVESGEVAPYVALSNMYAGH 538
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
G ++EV +R M + K+ G S++E+ LH FI D +HPE SI A++ L
Sbjct: 539 GMWDEVSRVRQLM-ANTLDKSTGKSFVEIDGRLHEFIQGDETHPEKDSIQAKILEL 593
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 193/573 (33%), Positives = 303/573 (52%), Gaps = 56/573 (9%)
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
++ A +F+ + E +V ++NAM+SG+ N + + + F+ M PC
Sbjct: 46 LRAARLLFDQMP-ERDVVSWNAMLSGYAQNGYVKEAKEIFDEM------------PCKNS 92
Query: 143 CCCDVM--AVLEVKKIHGL--VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+ M A ++ +I +F+ D ++ + ++ Y+K + +A +F+ +P R
Sbjct: 93 ISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 152
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR--- 255
D V WN M++GYAQ GE +A +F + FT T ++S + G R
Sbjct: 153 DEVSWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVF 208
Query: 256 -------------VVHGIVVKMGYDSG-----------VPVMNALIDMYGKGKCVGEALE 291
++ G V D V N +I Y + + +A
Sbjct: 209 DGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARN 268
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F+ M ++D SW +I+ + Q G + L LF M G + + TF++ L C+ +AA
Sbjct: 269 FFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAA 328
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G+Q+HG +V GL ++ NAL+ MY KCG++ DA +VF + +K+V
Sbjct: 329 LELGKQVHGRVVKAGLESG--------CYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 380
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN MI GY G GKEAL +F M + + PD+VT VGVLSACSH+G + +G E+ M
Sbjct: 381 SWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSM 440
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
YG+ +HYTC+ID+LGRAG+L++A L MP E + W LL ASR+HGNT+L
Sbjct: 441 TQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTEL 500
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
E AA+ +F++EP + G YVL+SN+Y A G++ +V +R MR + V+K PG SW+E+++
Sbjct: 501 GEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQN 560
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+HTF D HPE IY L L ++++ G
Sbjct: 561 KIHTFTVGDSVHPERDRIYTFLEELDLKMKKEG 593
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 34/282 (12%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S ++I Y +C +M A +F + C+ NV ++N MI+G+ N + +FF+ M Q
Sbjct: 217 VSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275
Query: 128 L-------------------------------GVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
G ++ TF + C ++ A+ K++
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG V K GL+ Y+G+AL+ Y KC +++A VFE + ++VV WN M+ GYA+ G
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNA 275
+AL +F M K GI T+ GVLSA G G + + G +
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455
Query: 276 LIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGN 316
+ID+ G+ + +A + + M E D +W +++ GN
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGN 497
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T ++L CA L+ G+++H +++ G+ +L+ MY KC + A VF
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E V ++N MI+G+ + F + L F M++ G+LPD T ++ C V +
Sbjct: 374 IE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ + + G+ + + +++ + +++A + + +P D W A+
Sbjct: 433 GTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGAS 492
Query: 207 -VNGYAQIGE 215
++G ++GE
Sbjct: 493 RIHGNTELGE 502
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 17/186 (9%)
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVL 452
++R A+++F +M ++DV SWN M+ GY +G KEA ++F M C+ + +++ G+L
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK-----NSISWNGML 99
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
+A +G + R L ES+ + + C++ + +L +A + MP E +
Sbjct: 100 AAYVQNGRIEDARR---LFESKADW--ELISWNCMMGGYVKRNRLVDARGIFDRMP-ERD 153
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRH 571
V W T+++ +G + AQR+F+ P + M + YV G +E +
Sbjct: 154 EVSWNTMISGYAQNGEL----LEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFD 209
Query: 572 TMRQQN 577
M ++N
Sbjct: 210 GMPEKN 215
>gi|297815228|ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321335|gb|EFH51756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 629
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 316/585 (54%), Gaps = 24/585 (4%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ L CA NL + +++H+ ++R + LI+ S C Q AL VFN +
Sbjct: 23 LQDLPKCA---NLNQVKQLHAQIIRRNLHQDLHIAPKLISALSLCRQTNLALRVFNQVQ- 78
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
EPNV N++I N ++ F+ M++ G+ D +T+P L+K C + + VK
Sbjct: 79 EPNVHLCNSLIRAHALNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGLSWLPVVKM 138
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFM--EEALKVFEELPLRDVVLWNAMVNGYAQI 213
+H + KLGL D+Y+ +AL++ Y +C + +A+K+FE++ RD V WN+M+ G +
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
GE A ++F M + + + G M F+ + KM + V
Sbjct: 199 GELRDARKLFDEMPQRDLISWNTMLDGYARCREMSRAFE-------LFEKMPERNTVS-W 250
Query: 274 NALIDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ ++ Y K + A +F+ M K++ +W I+ + + G +L D+M+++G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTIIIAGYAEKGLLKEADKLVDQMVASG 310
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ D ++L AC+ L G + H I + L N S NAL+DMY K
Sbjct: 311 LRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNLNSNASVL--------NALLDMYAK 362
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS++ A VF M KKD+ SWN M+ G G+ G GKEA+++FS M + + PD+VTF+ V
Sbjct: 363 CGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRKEGIWPDKVTFIAV 422
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L +C+H+G + +G ++ ME Y +VP +EHY C++D+LGR G+L EA ++ MP E
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPKVEHYGCLVDLLGRGGRLKEAIKVVQTMPMEP 482
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
N V+W LL A R+H D+A+ + +L+P GNY L+SNIY A +E V DIR
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPSDPGNYTLLSNIYAAAEDWEGVADIRS 542
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
M+ V K G S +EL+DG+H F D+SHP++ IY L SL
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 313/573 (54%), Gaps = 10/573 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+IH+++++ G + + SL++ Y K + A +F ++ + T+N++++G+ +
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMTGYSNE 219
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ ++ F + G+ P +TF L+ + +++HG V K +V++G
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL++ Y K ++E K+F E+P D + +N ++ YA G+F ++ ++FR++
Sbjct: 280 NALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+F +LS + GR +H + +G + V NAL+DMY K EA +I
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ + K W ++++ + Q G H+ + +F M G D TF+++L AC++LA++
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQ+H ++ +G N V+ +AL+D Y KCG M DA F +M +++ S
Sbjct: 460 SLGRQLHSLLIRSGFMSN--------VYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I Y +G L+ F M ++ KPD V+F+ VLSACSH GF+ + M
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
Y V P EHYT ++D+L R G+ +EA +L MP E + ++W ++L + R+H N +LA
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 533 EIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ AA R+F +E Y+ MSNIY G+++ V ++ MR + VRK P SW+E+K
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F ++D+SHPE K I ++++L+ + + G
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKG 724
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 252/513 (49%), Gaps = 15/513 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
F TC ++ Q+ L++G +H++ + + + +S+ +I+ + K ++ A
Sbjct: 39 FNPNTCRSNFQV---NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARE 95
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + E ++ +I G+ ++ + + + MR+ G+ PD T L+ ++
Sbjct: 96 LFDGM-VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELE 154
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +IH V KLG + ++ + ++LV+ Y K + A ++F+ + +D V +N+++
Sbjct: 155 TKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMT 214
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+ G +A+E+F + GI S FT +LSA + + K G+ VHG V+K +
Sbjct: 215 GYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVW 274
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V NAL+D Y K V E ++F M E D S+N ++T + G + LF ++
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQ 334
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
F F+T+L + L GRQIH + G + NAL+DM
Sbjct: 335 FTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE--------NALVDM 386
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC ++AQ +F ++ K W MI Y G+ +E +++FS M + D+ TF
Sbjct: 387 YAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+L AC++ +S GR+ L+ R G + + + ++D + G + +A + MP
Sbjct: 447 ASILRACANLASISLGRQLHSLL-IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
E N V W L++A +GN D + Q++ Q
Sbjct: 506 -ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 45/345 (13%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I + K G + + + VN +L+ + A +VF+++P ++ + N M++G+ + G+
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 216 FHKALEVFRRM--------------------SKE-----------GIWMSRFTVTGVLSA 244
KA E+F M SKE GI T+ +LS
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 245 LIMMGFFKNGRV---VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
G + V +H V+K+GY+ + V N+L+D Y K C+ A ++F+ M KD
Sbjct: 150 F---GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDT 206
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
++NS+MT + G ++ + LF + ++G +P TF+ +L A L G+Q+HG+
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGF 266
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ N VF+ NAL+D Y+K + + +F +M + D S+N++I Y
Sbjct: 267 VLKTNFVWN--------VFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYA 318
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+GQ KE+ D+F + + + F +LS + S L GR+
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQ 363
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT + L+ CA+ ++ G+++HS ++R+G + + S ++L++ Y+KC M A+
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F + E N ++NA+IS + N L+ F M Q G PD +F ++ C
Sbjct: 500 SFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 149 AVLEVK---KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
V E ++++ + Y +++V+ + +EA K+ E+P ++W+
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHY--TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616
Query: 205 AMVNG 209
+++N
Sbjct: 617 SVLNS 621
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 324/590 (54%), Gaps = 13/590 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKC-CQMKYALFVFNNLS 94
A L+ C++ G I +++L+TG DS + + +LI+M++K ++ A VF+ +
Sbjct: 150 ALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQ 209
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
N+ T+ MI+ + +D F + PDK+T L+ C ++ K
Sbjct: 210 -HKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGK 268
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
++H V + GL DV++G LV+ Y K +E + K+F + +V+ W A+++GY Q
Sbjct: 269 QLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSR 328
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+ +A+++F M + + FT + VL A + F G+ +HG +K+G + V N
Sbjct: 329 QEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGN 388
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LI+MY + + A + F ++ EK++ S+N+ + + + D + G P
Sbjct: 389 SLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASP 448
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
T++ +L + + ++ G QIH IV +G N + +NNAL+ MY+KCG+
Sbjct: 449 --FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN--------LCINNALISMYSKCGN 498
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
A VF M ++V +W +I G+ G +AL++F M E +KP+EVT++ VLSA
Sbjct: 499 KEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSA 558
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH G + + + M + + P +EHY C++D+LGR+G L EA E +MP +A+ +
Sbjct: 559 CSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADAL 618
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
VWRT L + R+H NT L E AA+++ + EP Y+L+SN+Y + G++++V +R +M+
Sbjct: 619 VWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMK 678
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
Q+ + K G SWIE+ + +H F D SHP+A+ IY EL L +++ G
Sbjct: 679 QKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLG 728
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 249/500 (49%), Gaps = 28/500 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CEP 97
L+ C NL+ G+ +H ++ +G+ + + SLI +YSKC + AL +F N+ +
Sbjct: 46 LKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKR 105
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG---VLPDKYTFPCLIKCCCDVMAVLEVK 154
++ +++A+IS F +N + L F HM Q + P++Y F L++ C + +
Sbjct: 106 DLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGL 165
Query: 155 KIHGLVFKLG-LDLDVYIGSALVNTYLKCQF-MEEALKVFEELPLRDVVLWNAMVNGYAQ 212
I + K G D V +G AL++ + K ++ A VF+++ +++V W M+ Y+Q
Sbjct: 166 AIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQ 225
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+G A+++F R+ +FT+T +LSA + + FF G+ +H V++ G S V V
Sbjct: 226 LGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFV 285
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
L+DMY K V + +IF M ++ SW ++++ + Q ++LF ML
Sbjct: 286 GCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHV 345
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ TFS+VL AC+ L G+Q+HG + GL+ + N+L++MY +
Sbjct: 346 TPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINC--------VGNSLINMYARS 397
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGV 451
G+M A+ F + +K++ S+N + + ++ + F+ E + T+ +
Sbjct: 398 GTMECARKAFNILFEKNLISYNT---AADANAKALDSDESFNHEVEHTGVGASPFTYACL 454
Query: 452 LSACSHSGFLSQGREFLPLM-ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
LS + G + +G + L+ +S +G I + +I M + G E AL + N+
Sbjct: 455 LSGAACIGTIVKGEQIHALIVKSGFGTNLCINN--ALISMYSKCGN----KEAALQVFND 508
Query: 511 ---ANPVVWRTLLAASRLHG 527
N + W ++++ HG
Sbjct: 509 MGYRNVITWTSIISGFAKHG 528
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 165/320 (51%), Gaps = 6/320 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + +++ C G+++HS+++R+G+ +L++MY+K ++ + +
Sbjct: 249 FTLTSLLSA---CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKI 305
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN + NV ++ A+ISG+ + + + F +M V P+ +TF ++K C +
Sbjct: 306 FNTM-LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPD 364
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
K++HG KLGL +G++L+N Y + ME A K F L ++++ +N +
Sbjct: 365 FGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA 424
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
A+ + ++ + G+ S FT +LS +G G +H ++VK G+ +
Sbjct: 425 NAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTN 482
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ + NALI MY K AL++F M +++ +W SI++ + G L LF ML
Sbjct: 483 LCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLE 542
Query: 330 AGFQPDLVTFSTVLPACSHL 349
G +P+ VT+ VL ACSH+
Sbjct: 543 IGVKPNEVTYIAVLSACSHV 562
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 23/291 (7%)
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV----MNALIDMYGKGKCVGEALEIFEMM 296
+L A I G + G+++H ++ DSG+P+ +N+LI +Y K AL IF M
Sbjct: 45 LLKACIRSGNLELGKLLHHKLI----DSGLPLDSVLLNSLITLYSKCGDWENALSIFRNM 100
Query: 297 --EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG---FQPDLVTFSTVLPACSHLAA 351
++D+ SW++I++ L F ML P+ F+ +L +CS+
Sbjct: 101 GHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLF 160
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG-SMRDAQMVFTKMSKKDV 410
G I +++ G + C + AL+DM+TK G ++ A+MVF KM K++
Sbjct: 161 FTTGLAIFAFLLKTGYFDSHVC-------VGCALIDMFTKGGLDIQSARMVFDKMQHKNL 213
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
+W +MI Y G +A+D+F + ++ PD+ T +LSAC F S G++
Sbjct: 214 VTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSW 273
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+ R G+ + ++DM ++ + + ++ M + N + W L++
Sbjct: 274 V-IRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHH-NVMSWTALIS 322
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
L+ S +L AC L G+ +H ++ +GL +D V + N+L+ +Y+KCG
Sbjct: 39 LIKSSLLLKACIRSGNLELGKLLHHKLIDSGLP-------LDSVLL-NSLITLYSKCGDW 90
Query: 396 RDAQMVFTKMS--KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK---LKPDEVTFVG 450
+A +F M K+D+ SW+ +I + + AL F M + + P+E F
Sbjct: 91 ENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTA 150
Query: 451 VLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELAL 505
+L +CS+ F + G F L+++ Y + + CV IDM + G ++ +
Sbjct: 151 LLRSCSNPLFFTTGLAIFAFLLKTGY-----FDSHVCVGCALIDMFTKGGLDIQSARMVF 205
Query: 506 AMPNEANPVVWRTLLA 521
N V W ++
Sbjct: 206 DKMQHKNLVTWTLMIT 221
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 286/500 (57%), Gaps = 11/500 (2%)
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF 184
M +LG+ PD +TFP +IK C + +IH V K G V+I ++L+ Y KC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
E + +VF+E+P ++ V W+A++ Q + +FR+M EG SR + +L+A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEG---SRPSRGAILNA 117
Query: 245 LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSW 304
+ + + V+ +VV+ G D V +A M+ + V A ++F+ + KD+ +W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
+ + + + L L +M+ G PD +T V+ ACS LA+ +HG I+
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IIT 236
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G N + + AL+D+Y KCGS+ A+ VF M ++++ +W+ MI GYGM G
Sbjct: 237 TGFFYNQL------LAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHG 290
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
G+EAL++F M +A +KPD +TFV +LSACSHSG +++G E M +GV P EHY
Sbjct: 291 WGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHY 349
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
C++D+LGRAG+L+EA + MP N VW LL A R+H N DLAE+ A+ +F L+P
Sbjct: 350 ACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDP 409
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ G YV++ NIY GK +E IR M+ + V+K G S IE+K+ L+ F++ DRSHP
Sbjct: 410 HNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHP 469
Query: 605 EAKSIYAELHSLTARLREHG 624
+ IY+EL L R+R+ G
Sbjct: 470 QTDLIYSELERLMDRIRQEG 489
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 188/394 (47%), Gaps = 21/394 (5%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF + + C+ + + G IH +++ G SLI MY KC + +
Sbjct: 11 FTFPFII-------KACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYEL 63
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
+ VF+ + + N +++A+I +D +G F M G P + + C
Sbjct: 64 SRQVFDEMP-DKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC-- 120
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
V + E ++ +V + GLD D + SA + +C +E A K+F+ + +D+V W
Sbjct: 121 -VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWAT 179
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-M 264
+ Y + +AL + ++M +GI+ T+ GV+ A + F+ +VHGI+
Sbjct: 180 TIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGF 239
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
Y+ + V ALID+Y K + A ++F+ M+E++I +W+++++ + G L LF
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
D+M A +PD +TF ++L ACSH G G+ N +A++ + +
Sbjct: 300 DQM-KASVKPDHITFVSILSACSH-----SGLVAEGWECFNSMARDFGVTPRPEHYA--C 351
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G + +A +M + + A W ++
Sbjct: 352 MVDILGRAGKLDEACDFIERMPVRPNAAVWGALL 385
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 207/699 (29%), Positives = 345/699 (49%), Gaps = 113/699 (16%)
Query: 29 PFTLAT----CIASLQLCAHQTNLQ-KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
P +L+T C LQ +++N + Q +H ++++G++ S + +L+N+YSK
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYA 65
Query: 84 KYALFVFNNL-----------------------SCE-------PNVFTYNAMISGFYSND 113
+A +F+ + SCE + ++ MI G+ +
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIG 125
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
K + M + G+ P ++T ++ + KK+H + KLGL +V + +
Sbjct: 126 QYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSN 185
Query: 174 ALVNTYLKCQ-------------------------------FMEEALKVFEELPLRDVVL 202
+L+N Y KC M+ A+ FE++ RD+V
Sbjct: 186 SLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVT 245
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN+M++GY Q G +AL++F +M ++ + RFT+ VLSA + G +H +
Sbjct: 246 WNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHI 305
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVG---------------------------------- 287
V G+D V+NALI MY + C G
Sbjct: 306 VTTGFDISGIVLNALISMYSR--CGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 288 -EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
EA IF+ ++++D+ +W +++ +EQ G + + LF M+ +P+ T + +L
Sbjct: 364 NEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVA 423
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S LA+L HG+QIHG V +G +I V ++NAL+ MY K GS+ A F +
Sbjct: 424 SSLASLGHGKQIHGSAVKSG--------EIYSVSVSNALITMYAKAGSITSASRAFDLIR 475
Query: 407 -KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++D SW MI+ G +EAL++F M L+PD +T+VGV SAC+H+G ++QGR
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++ +M+ ++PT+ HY C++D+ GRAG L EA E MP E + V W +LL+A R+
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRV 595
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
+ N DL ++AA+R+ LEP + G Y ++N+Y A GK+EE IR +M+ V+K G S
Sbjct: 596 YKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
WIE+K +H F D HP+ IY + + +++ G
Sbjct: 656 WIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMG 694
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F + G + + +TLA A L + + +L G++IH +++G I S +LI M
Sbjct: 401 FRSMVGEEQRPNSYTLA---AMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITM 457
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y+K + A F+ + CE + ++ +MI + A + L+ F M G+ PD T
Sbjct: 458 YAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHIT 517
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS-----ALVNTYLKCQFMEEALKV 191
+ + C V + ++ F + D+D I + +V+ + + ++EA +
Sbjct: 518 YVGVFSACTHAGLVNQGRQ----YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573
Query: 192 FEELPLR-DVVLWNAMVNG 209
E++P+ DVV W ++++
Sbjct: 574 IEKMPIEPDVVTWGSLLSA 592
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 337 bits (865), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 316/607 (52%), Gaps = 64/607 (10%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H++ +++G T L+ MY++ C + A VF+ + N+ ++ A++ +
Sbjct: 67 GKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTMPLR-NLHSWTALLRVYI 125
Query: 111 SNDFAFKGLDFFNHMRQLGVLP--DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
F + F + GV D + FP ++K CC + AV +++HG+ K D+
Sbjct: 126 EMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMK 185
Query: 169 VYIG-------------SALVNTYLKCQFMEEALKVFEELPL----RDVVLWNAMVNGYA 211
+A++ Y + + +A ++F+ + +D + WN+M++GY
Sbjct: 186 SAFEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYV 245
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
F +A +FR + KEGI FT+ VL+ M + G+ H + + G S
Sbjct: 246 DGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSI 305
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN--------------- 316
V AL++MY K + + A F+ + E+D+ +WN++++ + +C
Sbjct: 306 VGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDG 365
Query: 317 --------------------HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
+D ++LF M A +PD+ T +L ACS LA + G+
Sbjct: 366 FEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGK 425
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
Q+H Y + G DV + AL+DMY KCG ++ V+ +S ++ S N M
Sbjct: 426 QVHAYSIRAG--------HDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAM 477
Query: 417 ILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYG 476
+ Y M G G+E + +F M +K++PD VTF+ VLS+C H+G L G E L LM + Y
Sbjct: 478 LTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YN 536
Query: 477 VVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAA 536
V+P+++HYTC++D+L RAGQL EAYEL +P EA+ V W LL +H DL EIAA
Sbjct: 537 VMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAA 596
Query: 537 QRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTF 596
+++ +LEP + GNYV+++N+Y + GK+ + R M+ ++K PGCSWIE +DG+H F
Sbjct: 597 EKLIELEPNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVF 656
Query: 597 ISSDRSH 603
++ D H
Sbjct: 657 VAKDIYH 663
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 142/314 (45%), Gaps = 38/314 (12%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + +A CA ++++G+E HS + G+ + + +L+ MYSKC + A
Sbjct: 270 FTLGSVLAG---CADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMA 326
Query: 90 FNNLS----------------C------------------EPNVFTYNAMISGFYSNDFA 115
F+ +S C EPNV+T+N +I+G+ N
Sbjct: 327 FDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQY 386
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ F M+ + PD YT ++ C + + K++H + G D DV+IG+AL
Sbjct: 387 DSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAAL 446
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
V+ Y KC ++ +V+ + ++V NAM+ YA G + + +FRRM +
Sbjct: 447 VDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDH 506
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE- 294
T VLS+ + G + G ++V + ++D+ + + EA E+ +
Sbjct: 507 VTFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKN 566
Query: 295 MMEEKDIFSWNSIM 308
+ E D +WN+++
Sbjct: 567 LPTEADAVTWNALL 580
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A L C H +L+ G E + M+ ++ S T ++++ S+ Q+ A + NL
Sbjct: 508 TFLAVLSSCVHAGSLEIGHECLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNL 567
Query: 94 SCEPNVFTYNAMISG 108
E + T+NA++ G
Sbjct: 568 PTEADAVTWNALLGG 582
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/492 (35%), Positives = 274/492 (55%), Gaps = 8/492 (1%)
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
L D +T L++ C ++L K HGL GL D + L+N Y KC + A +
Sbjct: 53 LIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARR 112
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ + +R ++ WN M+ GY E +AL++F RM +EG M+ FT++ L A
Sbjct: 113 VFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ +H I +K+ DS V A +D+Y K + +A +FE M EK +W+S+
Sbjct: 173 IIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAG 232
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G H+ L LF G Q T S++L C+ LA ++ G Q+H IV +G +N
Sbjct: 233 FVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRN 292
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
+F+ +L+D+Y KCG + + VF M +K+V WN MI + EA+
Sbjct: 293 --------LFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAM 344
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M + + P+EVT++ +LSACSH+G + +GR + L+ S P + HY+C++D+
Sbjct: 345 ILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDV 404
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
LGR+G+ +EA++L MP E +W +LL +SR+H N LA IAA+++F+LEP + GN+
Sbjct: 405 LGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNH 464
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
VL+SN+Y A G +E V+ R +R +K G SWIE K +H F++ +R HP +Y
Sbjct: 465 VLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVY 524
Query: 611 AELHSLTARLRE 622
+L + +R+
Sbjct: 525 NKLEEIYHEMRK 536
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 200/381 (52%), Gaps = 8/381 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA + +L G+ H + G++ ++ LIN+Y+KC Q A VF+ +S +
Sbjct: 63 LQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVR-S 121
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI+G+ N + L F+ M + G ++T + C A++E K++H
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHT 181
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ KL LD ++G+A ++ Y KC +++A VFE +P + V W+++ G+ Q G +
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L +F+ +EG+ ++ FTV+ +LS + G VH ++VK G+ + V +L+D
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVD 301
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
+Y K + ++ E+F MEEK++ WN+++ + + + LF++M G P+ VT
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVT 361
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ ++L ACSH + GR ++ + A+ +V + ++D+ + G +A
Sbjct: 362 YLSILSACSHTGLVEEGRHYFNLLLSDRTAE-------PNVLHYSCMVDVLGRSGKTDEA 414
Query: 399 QMVFTKMSKKDVASWNIMILG 419
+ KM + AS +LG
Sbjct: 415 WKLLDKMPFEPTASMWGSLLG 435
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 150/281 (53%), Gaps = 6/281 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ + + CA + + + +++H+ ++ + S T+ +++Y+KC +K A +V
Sbjct: 158 FTLSSTLCA---CAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWV 214
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F N+ E T++++ +GF N + L F ++ G+ ++T ++ C +
Sbjct: 215 FENMP-EKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLAL 273
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
++E ++H ++ K G ++++ ++LV+ Y KC +E++ +VF ++ ++VVLWNAM+
Sbjct: 274 IIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIAS 333
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDS 268
+++ +A+ +F +M + GI+ + T +LSA G + GR +++ +
Sbjct: 334 FSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEP 393
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
V + ++D+ G+ EA ++ + M E W S++
Sbjct: 394 NVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT+++ +++ CA + +G ++H+ +++ G + TSL+++Y+KC Q++ + V
Sbjct: 259 FTVSSILST---CASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEV 315
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F ++ E NV +NAMI+ F + +++ + F M+Q+G+ P++ T+ ++ C
Sbjct: 316 FADME-EKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGL 374
Query: 150 VLEVKKIHGLVFK-LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV-LWNAMV 207
V E + L+ + +V S +V+ + +EA K+ +++P +W +++
Sbjct: 375 VEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434
Query: 208 NGYAQIGEFHKALEVFR 224
G ++I HK + + R
Sbjct: 435 -GSSRI---HKNIRLAR 447
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 327/617 (52%), Gaps = 19/617 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F L T L+L L +H+ + G + ++LI+ YS C + A V
Sbjct: 532 FVLTTV---LKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRV 588
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + + + + AM+S + ND L F+ MR + + +++ + +
Sbjct: 589 FDGIVGK-DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSS 647
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
V+ K IH K D + ++ AL++ Y KC +E+A FE + DV+LW+ M++
Sbjct: 648 VVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISR 707
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YAQ + +A E+F RM + + + F+++ VL A M G+ +H +K+G++S
Sbjct: 708 YAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESE 767
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V NALID+Y K + +LEIF + + + SWN+I+ + + G + L +F M +
Sbjct: 768 LFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRA 827
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
A VT+S+VL AC+ A++ H Q+H I + D ++N+L+D Y
Sbjct: 828 ASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNS--------DTIVSNSLIDSY 879
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG +RDA+ +F + + D+ SWN +I GY + GQ A ++F M + +K +++TFV
Sbjct: 880 AKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFV 939
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LS C +G +SQG M +G+ P++EHYTC++ +LGRAG+LN+A +P+
Sbjct: 940 ALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPS 999
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ +VWR LL++ +H N +L +A++V ++EP YVL+SN+Y A G ++V
Sbjct: 1000 APSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFF 1059
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR-LREHGDCCA 628
R +MR VRK PG SW+E+K +H F HP + I A L L + +RE
Sbjct: 1060 RKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIRE------ 1113
Query: 629 GTLFDSDSTASGFEKHR 645
G + D+D E+ +
Sbjct: 1114 GYVPDTDEVLHDLEEEQ 1130
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 246/497 (49%), Gaps = 13/497 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIID--SPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
LQ C + + + G+ +H +++R+G + L+NMY+K A VF+ L E
Sbjct: 435 LQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLP-E 493
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ ++ ++ G + F +R G +++ ++K + + +
Sbjct: 494 RNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGV 553
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H KLG D + ++GSAL++ Y C + +A +VF+ + +D V W AMV+ Y++
Sbjct: 554 HACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCP 613
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
L++F +M ++ F +T VL A + + G+ +H VK YD+ V AL
Sbjct: 614 ENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGAL 673
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMY K + +A FEM+ D+ W+ +++ + QC ++ LF RM+ + P+
Sbjct: 674 LDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+ S+VL AC+++ L G+QIH + + G ++F+ NAL+D+Y KC M
Sbjct: 734 FSLSSVLQACANMPLLDLGKQIHNHAIKIGHES--------ELFVGNALIDLYAKCSDME 785
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+ +F+ + + SWN +I+GY G G+ AL +F M A + +VT+ VL AC+
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
+ ++ + L+E TI + +ID + G + +A E+ + E + V W
Sbjct: 846 STASINHVGQVHCLIEKSTFNSDTIVSNS-LIDSYAKCGCIRDAREIFETL-KECDLVSW 903
Query: 517 RTLLAASRLHGNTDLAE 533
+++ +HG +A+
Sbjct: 904 NAIISGYAVHGQAAMAQ 920
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 197/398 (49%), Gaps = 28/398 (7%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG--LDLDVYIGSALVNTYLKCQFMEEALK 190
D Y + L++ C + +HG V + G LD++ + L+N Y K A +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ LP R++V + +V G+A GEF +A +F+R+ EG +++F +T VL ++ M
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
VH K+G+D V +ALID Y V +A +F+ + KD +W ++++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ + + TL++F +M A + + ++VL A L++++ G+ IH
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHAC--------- 657
Query: 371 GSCKDIDDV--FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKE 428
S K + D + AL+DMY KCG++ DA++ F ++ DV W++MI Y Q ++
Sbjct: 658 -SVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQ 716
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--- 485
A ++F M + + P+E + VL AC++ L G++ + I H +
Sbjct: 717 AFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI-------HNHAIKIGHESELF 769
Query: 486 ---CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ID+ + + + E+ ++ + N V W T++
Sbjct: 770 VGNALIDLYAKCSDMESSLEIFSSL-RDVNEVSWNTII 806
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 91/203 (44%), Gaps = 10/203 (4%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P T T + L+ CA ++ ++H + ++ + SLI+ Y+KC ++ A
Sbjct: 831 PSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDARE 890
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F L E ++ ++NA+ISG+ + A + F+ M + + + TF L+ C
Sbjct: 891 IFETLK-ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTG 949
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
V + + + G++ + + +V + + +AL ++P ++W A+
Sbjct: 950 LVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRAL 1009
Query: 207 -----VNGYAQIGEF--HKALEV 222
V+ ++G F K LE+
Sbjct: 1010 LSSCIVHKNVELGRFSAEKVLEI 1032
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 316/626 (50%), Gaps = 65/626 (10%)
Query: 53 EIHSYMLRTGIIDSPLSI-----------TSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
+IH+++L G++ S+ T+ S +++AL + ++L
Sbjct: 28 QIHAHLLAAGLLQDFSSLLAAAYALSTTATATDARTSPPSPLRHALALLSSLPAS----A 83
Query: 102 YNAMISGFYSND--------FAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLE 152
YNA I +D + L + + + G PD TFP L+K C +
Sbjct: 84 YNAAIRALSLSDDGDRHGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGY 143
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V +LGLD DV++ +A + ME+A ++F+ P+RD+V WN ++ GY +
Sbjct: 144 GDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVR 203
Query: 213 IGEFHKALEVFRRMSKEG--IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G +ALE+F RM E + T+ +S M + GR +HG V G V
Sbjct: 204 RGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTV 263
Query: 271 PVMNALIDMYGK------GKCVGEALE-------------------------IFEMMEEK 299
+MNAL+DMY K K V E +E +F+ M E+
Sbjct: 264 RLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPER 323
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D+F WN++MT + QC L LF M A PD +T +L ACS L AL G +H
Sbjct: 324 DVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVH 383
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
YI + L + V + +L+DMY KCG++ A +F ++ +K+ +W MI G
Sbjct: 384 RYIEKHRL--------VFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICG 435
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
G EA++ F M E KPDE+TF+GVLSAC H+G + +GREF LME++Y +
Sbjct: 436 LANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLER 495
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRV 539
++HY+C+ID+LGRAG L+EA +L MP E + VVW + A R+ GN L E AA ++
Sbjct: 496 KMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKL 555
Query: 540 FQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS 599
+++P G YVL++N+Y ++ +R MR V K PGCS IEL +H FI
Sbjct: 556 VEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFIVK 615
Query: 600 DRSHPEAKSIYAELHSLTARLREHGD 625
D+SH ++ +IY LH +T +++ D
Sbjct: 616 DKSHMDSHAIYDCLHEITLQIKHTAD 641
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 191/458 (41%), Gaps = 57/458 (12%)
Query: 5 ISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGII 64
+ R P S ++ PF L + CA G +++LR G+
Sbjct: 105 VRRCLPLYRALLRSGTARPDHLTFPFLL-------KACARLREWGYGDAALAHVLRLGLD 157
Query: 65 DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
+ + + S M+ A +F+ S ++ ++N +I G+ + L+ F
Sbjct: 158 SDVFVVNAATHFLSIRGPMEDARRLFDR-SPVRDLVSWNTLIGGYVRRGNPAEALELFWR 216
Query: 125 M--RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
M V PD+ T + C + + +++HG V G+ V + +AL++ Y+KC
Sbjct: 217 MVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKC 276
Query: 183 -------------------------------QFMEEALKVFEELPLRDVVLWNAMVNGYA 211
M++A KVF+E+P RDV WNA++ GY
Sbjct: 277 GSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYV 336
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q + +AL +F M + + T+ +L+A +G + G VH + K V
Sbjct: 337 QCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVA 396
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ +LIDMY K + +A+ IF+ + EK+ +W +++ G+ + + F M+ G
Sbjct: 397 LGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELG 456
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIV----VNGLAKNGSCKDIDDVFMNNALMD 387
+PD +TF VL AC H + GR+ + + K+ SC ++D
Sbjct: 457 QKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSC-----------MID 505
Query: 388 MYTKCGSMRDA-QMVFTKMSKKDVASWNIMILGYGMDG 424
+ + G + +A Q+V T + D W + M G
Sbjct: 506 LLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQG 543
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 96/189 (50%), Gaps = 8/189 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C+ L+ G +H Y+ + ++ S TSLI+MY+KC ++ A+ +F +
Sbjct: 362 TMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEI 421
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E N T+ AMI G ++ A + ++ F M +LG PD+ TF ++ CC V E
Sbjct: 422 P-EKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEG 480
Query: 154 KKIHGLV-FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM----- 206
++ L+ K L+ + S +++ + ++EA ++ +P+ D V+W A+
Sbjct: 481 REFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACR 540
Query: 207 VNGYAQIGE 215
+ G +GE
Sbjct: 541 MQGNISLGE 549
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 321/599 (53%), Gaps = 24/599 (4%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
C +L C+ NL G+ IH +L G+ + SLI+MYSKC Q+ YA +F++ S
Sbjct: 70 CAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH-S 128
Query: 95 CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC------CDVM 148
+ + ++N++I+G+ N + L M Q G+ + YT +K C C +
Sbjct: 129 DKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF 188
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +H KLGL LDV +G+AL++ Y K +++A+++F+++ ++VV++NAM+
Sbjct: 189 GTM----LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMA 244
Query: 209 GYAQIGEF-----HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
G Q +KAL +F M GI S FT + +L A I++ FK + VH ++ K
Sbjct: 245 GLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCK 304
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G S + + LID+Y + +AL F + I +++ + Q G + L L
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSL 364
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F +L+ +PD FST++ +C+++ L G QI G+ G+++ +F N+
Sbjct: 365 FYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRF-------TIFQNS 417
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
+ MY K G + A + F +M D+ SW+ MI G EAL F M ++P
Sbjct: 418 QIW-MYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEP 476
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ F+GVL ACSH G + +G + ME Y + ++H CV+D+LGRAG+L +A L
Sbjct: 477 NHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESL 536
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
L + E PV+WR LL+A R+H +T A+ AQ+V +LEP +YVL+ NIY+ G
Sbjct: 537 ILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNK 596
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R M ++ ++K PG SWI++ D +++F+S DRSH + IYA+L + A +
Sbjct: 597 LAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR 655
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 239/485 (49%), Gaps = 36/485 (7%)
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFP 138
KC + A +F+ +S + N+ TYN++ISG+ K + F+ R+LG+ DKY
Sbjct: 13 KCGDTRSADKLFDKMS-KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C + K IHGL+ GL V + ++L++ Y KC ++ A +F+
Sbjct: 72 GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI--MMGFFKNGRV 256
D V WN+++ GY Q G++ + L + ++M + G+ + +T+ L A G G +
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM-------T 309
+H +K+G V V AL+DMY K + +A++IF+ M +K++ +N++M T
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQET 251
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ ++C L LF M S G +P + T+S++L AC + +Q+H + NGL
Sbjct: 252 IEDKCAYK--ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL-- 307
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
+ D ++ + L+D+Y+ GSM DA + F + + MI GY +G+ + A
Sbjct: 308 ------LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESA 361
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
L +F + + KPDE F ++S+C++ G L G + + ++ G+ I
Sbjct: 362 LSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQ-IQGHATKVGISRFTIFQNSQIW 420
Query: 490 MLGRAGQLNEAYELALAMPNEANP--VVWRTLLAASRLHGNTDLAEIAAQRVFQL----- 542
M ++G L Y L NP V W T++ ++ HG+ + A R F+L
Sbjct: 421 MYAKSGDL---YAANLTFQQMENPDIVSWSTMICSNAQHGHA----MEALRFFELMKSCG 473
Query: 543 -EPGH 546
EP H
Sbjct: 474 IEPNH 478
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 191/597 (31%), Positives = 315/597 (52%), Gaps = 21/597 (3%)
Query: 25 TFNHPFTLATC--IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
F PF C +A + C + +H++++++ T+ ++M+ KC
Sbjct: 658 NFTFPFVAKACARLADVGCC---------EMVHAHLIKSPFWSDVFVGTATVDMFVKCNS 708
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA VF + E + T+NAM+SGF + K F MR + PD T LI+
Sbjct: 709 VDYAAKVFERMP-ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQ 767
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDV 200
++ ++ +H + +LG+D+ V + + ++TY KC ++ A VFE + R V
Sbjct: 768 SASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV 827
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V WN+M Y+ GE A ++ M +E T + ++ GR++H
Sbjct: 828 VSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 887
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+ +G D + +N I MY K + A +F++M + SW +++ + + G+ D
Sbjct: 888 AIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 947
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M+ +G +PDLVT +++ C +L G+ I + G CK D+V
Sbjct: 948 LALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG------CKR-DNVM 1000
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ NAL+DMY+KCGS+ +A+ +F +K V +W MI GY ++G EAL +FS M +
Sbjct: 1001 ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLD 1060
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
KP+ +TF+ VL AC+HSG L +G E+ +M+ Y + P ++HY+C++D+LGR G+L EA
Sbjct: 1061 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEA 1120
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
EL M + + +W LL A ++H N +AE AA+ +F LEP YV M+NIY A
Sbjct: 1121 LELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAA 1180
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G ++ IR M+Q+N++K PG S I++ H+F + H E + IY L+ L+
Sbjct: 1181 GMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 1237
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 214/444 (48%), Gaps = 16/444 (3%)
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
L+ + LS +V +N I + + + L F M++ G P+ +TFP + K C
Sbjct: 614 LYRISGLS---SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACAR 670
Query: 147 VMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAM 206
+ V + +H + K DV++G+A V+ ++KC ++ A KVFE +P RD WNAM
Sbjct: 671 LADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAM 730
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ Q G KA +FR M I TV ++ + K +H + +++G
Sbjct: 731 LSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV 790
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLF 324
D V V N I YGK + A +FE ++ D + SWNS+ + G L+
Sbjct: 791 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 850
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
ML F+PDL TF + +C + L GR IH + + G+ +DI+ + N
Sbjct: 851 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAI-----HLGTDQDIEAI---NT 902
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
+ MY+K A+++F M+ + SW +MI GY G EAL +F M ++ KPD
Sbjct: 903 FISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPD 962
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVV-PTIEHYTCVIDMLGRAGQLNEAYEL 503
VT + ++S C G L G+ ++ YG + +IDM + G ++EA ++
Sbjct: 963 LVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 1021
Query: 504 ALAMPNEANPVVWRTLLAASRLHG 527
P E V W T++A L+G
Sbjct: 1022 FDNTP-EKTVVTWTTMIAGYALNG 1044
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/592 (32%), Positives = 330/592 (55%), Gaps = 21/592 (3%)
Query: 35 CIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
C SL C ++ +L + +H+++L++G + S LI+ Y KC + A +F+ +
Sbjct: 3 CYTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFG-HKLIDGYIKCSVITEARKLFDEM 61
Query: 94 SCEPN--VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
PN + T+N+MIS S + ++ +++M GVLPD YTF + K ++
Sbjct: 62 ---PNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSR 118
Query: 152 EVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
E +K HGL LG ++ D ++ + +V+ Y K M++A VF+ + +DVVL+ A++ GY
Sbjct: 119 EGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGY 178
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q G +ALEVF M I + +T+ VL + +G NG+++HG+VVK G +S V
Sbjct: 179 NQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVV 238
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+L+ MY K V +++++F + +W S + Q G + L +F M+
Sbjct: 239 ASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRC 298
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ T S++L ACS LA L G QIH V G+ N F++ AL+ +Y
Sbjct: 299 SISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK--------FVDAALIHLYG 350
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG++ A+ VF +++ D+ S N MI Y +G G EAL++F + + L+P+ VTF+
Sbjct: 351 KCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFIS 410
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L AC+++G + +G + L+ + + + T +HYTC+ID+LGRA + EA + +
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA---TMLIEEG 467
Query: 511 ANPVV--WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
NP V WRTLL A ++HG ++AE +++ P G ++L++NIY + GK++ V++
Sbjct: 468 KNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIE 527
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++ R ++K P SW+++ +HTF++ D SHP A I LH L ++
Sbjct: 528 MKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKV 579
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 158/317 (49%), Gaps = 13/317 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F G++ + +TLA+ + S C + +L G+ IH +++ G+ S TSL+ M
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVS---CGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTM 247
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
YSKC ++ ++ VFN+L+ +V T+ + I G N L F M + + P+ +T
Sbjct: 248 YSKCNMVEDSIKVFNSLAYASHV-TWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFT 306
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
++ C + + ++IH + KLG+D + ++ +AL++ Y KC +E+A VF+ L
Sbjct: 307 LSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLT 366
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
D+V N M+ YAQ G H+ALE+F R+ K G+ + T +L A G + G
Sbjct: 367 ELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQ 426
Query: 257 VHGIV-----VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ ++ +++ D +ID+ G+ K EA + E + D+ W +++
Sbjct: 427 IFSLIRNNHSIELTRDH----YTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNAC 482
Query: 312 EQCGNHDGTLRLFDRML 328
+ G + + +ML
Sbjct: 483 KIHGEVEMAEKFMKKML 499
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 282/509 (55%), Gaps = 28/509 (5%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK-------------- 181
+ P +K C + +H L + G D + +AL+N +K
Sbjct: 51 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 110
Query: 182 ------CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
E KVF+E+ RD V WN ++ G A+ +AL + R M ++G
Sbjct: 111 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 170
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
FT++ VL K G VVHG +K G+D+ V V ++LIDMY + ++++F+
Sbjct: 171 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 230
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ D WNS++ + Q G+ + L +F RML AG +P VTFS+++PA +L+ L G
Sbjct: 231 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 290
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+Q+H Y++ + D++F++++L+DMY KCG++ A+ VF + D+ SW
Sbjct: 291 KQLHAYLI--------RARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 342
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
MI+GY + G EA +F M +KP+ +TF+ VL+ACSH+G + G ++ M ++Y
Sbjct: 343 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQY 402
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
G VP++EH + D LGRAG L+EAY M + VW TLL A R+H NT LAE
Sbjct: 403 GFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEV 462
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++F+LEP G++V++SN+Y A G++ E +R +MR + ++K P CSWIE+K+ LH
Sbjct: 463 AKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHV 522
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHG 624
FI+ D+SHP I L+ + ++ G
Sbjct: 523 FIAHDKSHPWYDRIIDALNVYSEQMIRQG 551
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 187/411 (45%), Gaps = 38/411 (9%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL- 87
P L +C A L LC +L H+ +R+G + +L+N+ K +
Sbjct: 53 PAALKSC-AGLGLCTLAASL------HALAIRSGSFADRFTANALLNLCIKLPGFHHPFG 105
Query: 88 -------------------FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
VF+ + E + ++N +I G + + L M +
Sbjct: 106 TNGPSGEGGLESAAYESMRKVFDEM-LERDAVSWNTLILGCAEHKRHQEALSMVREMWRD 164
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G +PD +T ++ + + +HG K G D DV++GS+L++ Y C M+ +
Sbjct: 165 GFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYS 224
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+KVF+ D VLWN+M+ GYAQ G +AL +FRRM + G+ T + ++ A +
Sbjct: 225 MKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNL 284
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
+ G+ +H +++ ++ + + ++LIDMY K V A +F ++ DI SW +++
Sbjct: 285 SLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMI 344
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ G LF+RM +P+ +TF VL ACSH G +G+ N ++
Sbjct: 345 MGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHA-----GLVDNGWKYFNSMS 399
Query: 369 KN-GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
G ++ AL D + G + +A ++M K +S W+ ++
Sbjct: 400 NQYGFVPSLEHC---AALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 9/294 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL+T + CA ++++G +H Y ++ G + +SLI+MY+ C QM Y++ V
Sbjct: 171 FTLSTVLPIFAECA---DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKV 227
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F++ S + + +N+M++G+ N + L F M Q GV P TF LI ++
Sbjct: 228 FDSFS-DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSL 286
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H + + + +++I S+L++ Y KC ++ A +VF + D+V W AM+ G
Sbjct: 287 LRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMG 346
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
YA G +A +F RM + + T VL+A G NG + + + + G+
Sbjct: 347 YALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVP 406
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTL 321
+ AL D G+ + EA M+ K S W++++ C H T+
Sbjct: 407 SLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL---RACRVHKNTV 457
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/487 (36%), Positives = 288/487 (59%), Gaps = 19/487 (3%)
Query: 147 VMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQF---MEEALKVFE--ELPLRDV 200
V ++ ++++IH + G+ + D +G L+ + M A KVF E P+ +V
Sbjct: 27 VSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NV 85
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+WN ++ GYA+IG A+ ++R M G + T +L A+ M + G +H
Sbjct: 86 FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHS 145
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+V++ G+ S + V N+L+ +Y V A ++F+ M EKD+ +WNS++ + G +
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ M G +PD T ++L AC+ + AL G++ H Y++ GL +N +
Sbjct: 206 ALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRN--------L 257
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+N L+D+Y +CG + +A+ +F +M K+ SW +I+G ++G GKEA+++F M E+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNM-ES 316
Query: 440 K--LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
K L P E+TFVG+L ACSH G + +G E+ M Y + P IEH+ C++D+L RAGQ+
Sbjct: 317 KEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQV 376
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIY 557
+AYE L MP + N V+WRTLL A +HG++DLAE+A ++ QLEP H G+YVL+SN+Y
Sbjct: 377 KKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMY 436
Query: 558 VAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ ++ +V IR M + VRK PG S +E+ + +H F+ D+SHP+ IYA+L +T
Sbjct: 437 ASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMT 496
Query: 618 ARLREHG 624
RLR G
Sbjct: 497 DRLRLEG 503
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 195/395 (49%), Gaps = 25/395 (6%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTG--IIDSPLS---ITSLINMYSKCCQMKYALFV 89
CI LQ ++L K ++IH++ +R G I D+ L I L+++ S M YA V
Sbjct: 18 CINLLQTYG-VSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKV 75
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVM 148
F+ + NVF +N +I G+ + + + MR G V PD +T+P L+K +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMA 135
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V + IH +V + G +Y+ ++L++ Y C + A KVF+++P +D+V WN+++N
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A+ G+ +AL ++ M +GI FT+ +LSA +G G+ H ++K+G
Sbjct: 196 GFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTR 255
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ N L+D+Y + V EA +F+ M +K+ SW S++ G + LF M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNME 315
Query: 329 SA-GFQPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
S G P +TF +L ACSH + G R++ + ++ C
Sbjct: 316 SKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGC---------- 365
Query: 384 ALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G ++ A KM + +V W ++
Sbjct: 366 -MVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L G+ H YM++ G+ + S L+++Y++C +++ A +F+ +
Sbjct: 224 TIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCC 144
+ N ++ ++I G N + ++ F +M + G+LP + TF ++ C
Sbjct: 284 -VDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYAC 334
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 318/604 (52%), Gaps = 21/604 (3%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A + L C +L + +H +M++TG I TSL+N+Y +C + A +F+
Sbjct: 79 AMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDE 138
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E NV T+ A+I+G+ N L+ F M +LG P YT ++ C +
Sbjct: 139 MP-EKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDL 197
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++HG K G IG++L Y K +E ++ F+ +P ++V+ W M++ A+
Sbjct: 198 GKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAE 257
Query: 213 IGEFHK-ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ + L +F M K + + FT+T V+S G+ V G K+G + +P
Sbjct: 258 DENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLP 317
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG-----------T 320
V N+ + +Y + EA+ +FE ME+ + +WN++++ Q +
Sbjct: 318 VKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQA 377
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L++F ++ + +PDL TFS++L CS + AL G QIH + G + DV
Sbjct: 378 LKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGF--------LSDVV 429
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+N+AL++MY KCG + A F +M + + +W MI GY G+ +A+ +F M A
Sbjct: 430 VNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG 489
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
KP+E+TFV +LSACS++G + + + +M++ Y + P ++HY C+IDM R G+L++A
Sbjct: 490 AKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDA 549
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
Y E N +W +L+A R HGN +LA AA R+ +L+P YVL+ N+Y++
Sbjct: 550 YAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYIST 609
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
G++ +V +R + +++ SWI ++D ++ F + DRSHP++ +Y L +L +
Sbjct: 610 GRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKA 669
Query: 621 REHG 624
+ G
Sbjct: 670 KAIG 673
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 13/299 (4%)
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M KEG + +L I G + +HG +VK G + V +L+++Y +
Sbjct: 69 MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+A +F+ M EK++ +W +++T + L +F ML G P T +L A
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
C + G+Q+HGY + G A S + N+L +YTK G++ F ++
Sbjct: 189 CVASHNIDLGKQVHGYTIKYGAASITS--------IGNSLCRLYTKSGNLESGIRAFKRI 240
Query: 406 SKKDVASWNIMILGYGMDGQGKE-ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
K+V +W MI D E L++F M + ++ P+E T V+S C S ++ G
Sbjct: 241 PDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLG 300
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV-WRTLLAA 522
++ + G + + + R G+ EA L M E N V+ W +++
Sbjct: 301 KQVQGFC-FKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEM--EDNSVITWNAMISG 356
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 192/595 (32%), Positives = 301/595 (50%), Gaps = 18/595 (3%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLR---TGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
A+ + + + G+ H+ LR G+ P L+N+YSK A +
Sbjct: 14 AAFEAAISSRSPRLGRAAHARALRLLSPGL--PPFICAHLVNLYSKLDLPAAAASALASD 71
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC--CCDVMAVL 151
P V ++ A ISG + L F M ++G+ P+ +TFP K C
Sbjct: 72 P-NPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCST 130
Query: 152 EVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+IH L + G L D ++ A ++ Y K + A ++FEE+P R+V+ WNA++
Sbjct: 131 VGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNA 190
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
G + + + + + G + +V +A F G HG VV G+D V
Sbjct: 191 VIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDV 250
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V NA++D YGK +C G+A +F+ M ++ SW S++ + Q G + L ++ +
Sbjct: 251 SVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNT 310
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P S+VL C+ L L GR +H V SC D + +F+ +AL+DMY
Sbjct: 311 GEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVR-------SCIDAN-IFVASALVDMYG 362
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEVTFV 449
KCG + DA+ VF M ++++ +WN MI GY G + AL +F M + P+ +T V
Sbjct: 363 KCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLV 422
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
V++ACS G G E M R+GV P EHY CV+D+LGRAG AYE+ MP
Sbjct: 423 NVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPM 482
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ VW LL A ++HG T+L IA++++F+L+P GN+VL+SN+ + G++ E D+
Sbjct: 483 RPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDV 542
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M+ ++K PGCSWI K+ +H F + D H I A L L +++ G
Sbjct: 543 RKEMKNVGIKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASG 597
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 137/284 (48%), Gaps = 7/284 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYAL 87
P ++ C A CA L G++ H +++ G D +S++ ++++ Y KC A
Sbjct: 213 PNVVSVC-AFFNACAGAMFLSLGEQFHGFVVTCGF-DMDVSVSNAMVDFYGKCRCAGKAR 270
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + N ++ +MI + + L + R G P + ++ C +
Sbjct: 271 AVFDGMRVR-NSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGL 329
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + + +H + + +D ++++ SALV+ Y KC +E+A +VF ++P R++V WNAM+
Sbjct: 330 LGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMI 389
Query: 208 NGYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMG 265
GYA IG+ AL VF M + G + T+ V++A G K+G + + + G
Sbjct: 390 GGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFG 449
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
+ ++D+ G+ A EI + M + S W +++
Sbjct: 450 VEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALL 493
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 194/614 (31%), Positives = 321/614 (52%), Gaps = 53/614 (8%)
Query: 54 IHSY-MLRTGI--------IDSP--LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
+H+Y ++R+ I I P S +L+ YSK + F L V T+
Sbjct: 45 VHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGV-TW 103
Query: 103 NAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
N +I G+ + + +N M + + T ++K V K+IHG V
Sbjct: 104 NVLIEGYSLSGLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI 163
Query: 162 KLGLDLDVYIGSALVNTY-------------------------------LKCQFMEEALK 190
KLG + + +GS L++ Y L C +E+AL+
Sbjct: 164 KLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQ 223
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F + +D V W+AM+ G AQ G +A+E FR M EG+ M ++ VL A +G
Sbjct: 224 LFRGME-KDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGA 282
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+GR +H +++ + V +ALIDMY K KC+ A +F+ M++K++ SW +++
Sbjct: 283 INDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVG 342
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q G +++F M +G PD T + AC+++++L G Q HG + GL
Sbjct: 343 YGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGL--- 399
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
I + ++N+L+ +Y KCG + D+ +F +M+ +D SW M+ Y G+ EA+
Sbjct: 400 -----IHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAI 454
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M + LKPD VT GV+SACS +G + +G+ + LM + YG+VP+ HY+C+ID+
Sbjct: 455 QLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDL 514
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
R+G++ EA MP + + W TLL+A R GN ++ + AA+ + +L+P H Y
Sbjct: 515 FSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 574
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIY 610
L+S+IY + GK++ V +R M+++NVRK PG SWI+ K LH+F + D S P + IY
Sbjct: 575 TLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIY 634
Query: 611 AELHSLTARLREHG 624
A+L L ++ ++G
Sbjct: 635 AKLEELYQKIIDNG 648
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 203/448 (45%), Gaps = 72/448 (16%)
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL---------------- 180
+ IK C + A VK IHG + + + ++ + +V+ Y
Sbjct: 6 YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65
Query: 181 ---------------KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
K + E + FE+LP RD V WN ++ GY+ G A++ +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125
Query: 226 MSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M K+ ++R T+ +L G G+ +HG V+K+G++S + V + L+DMY K
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185
Query: 285 CVGEALEIFEMME------------------------------EKDIFSWNSIMTVHEQC 314
C+ +A ++F ++ EKD SW++++ Q
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQN 245
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + F M G + D F +VLPAC L A+ GRQIH I+ L
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQ------ 299
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
D +++ +AL+DMY KC + A+ VF +M +K+V SW M++GYG G+ EA+ +F
Sbjct: 300 --DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFL 357
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + + PD T +SAC++ L +G +F + G++ I ++ + G+
Sbjct: 358 DMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITA-GLIHYITVSNSLVTLYGKC 416
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAA 522
G ++++ L M N + V W +++A
Sbjct: 417 GDIDDSTRLFNEM-NVRDEVSWTAMVSA 443
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 206/431 (47%), Gaps = 51/431 (11%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK---- 79
+ F+ T T + L+L + ++ G++IH +++ G L + L++MYSK
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 80 ---------------------------CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
C ++ AL +F + E + +++AMI G N
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM--EKDSVSWSAMIKGLAQN 245
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ ++ F M+ G+ D+Y F ++ C + A+ + ++IH + + L +Y+G
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVG 305
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SAL++ Y KC+ + A VF+ + ++VV W AMV GY Q G +A+++F M + GI
Sbjct: 306 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGID 365
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+T+ +SA + + G HG + G + V N+L+ +YGK + ++ +
Sbjct: 366 PDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRL 425
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M +D SW ++++ + Q G ++LFD+M+ G +PD VT + V+ ACS A L
Sbjct: 426 FNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSR-AGL 484
Query: 353 MHGRQIHGYIVVNG---LAKNG--SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS- 406
+ Q + +++N + NG SC ++D++++ G + +A M
Sbjct: 485 VEKGQRYFELMINEYGIVPSNGHYSC-----------MIDLFSRSGRIEEAMGFINGMPF 533
Query: 407 KKDVASWNIMI 417
+ D W ++
Sbjct: 534 RPDAIGWTTLL 544
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 20/311 (6%)
Query: 14 CFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
CF G + +PF + L C + G++IH+ ++RT + D ++L
Sbjct: 254 CFREMKIEGLKMDQYPFG-----SVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSAL 308
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
I+MY KC + YA VF+ + + NV ++ AM+ G+ A + + F M++ G+ PD
Sbjct: 309 IDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPD 367
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
YT I C ++ ++ E + HG GL + + ++LV Y KC ++++ ++F
Sbjct: 368 HYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFN 427
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+ +RD V W AMV+ YAQ G +A+++F +M + G+ T+TGV+SA G +
Sbjct: 428 EMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487
Query: 254 GRVV-------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWN 305
G+ +GIV G+ S +ID++ + + EA+ M D W
Sbjct: 488 GQRYFELMINEYGIVPSNGHYS------CMIDLFSRSGRIEEAMGFINGMPFRPDAIGWT 541
Query: 306 SIMTVHEQCGN 316
++++ GN
Sbjct: 542 TLLSACRNKGN 552
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 314/577 (54%), Gaps = 13/577 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
+ G IH + G L ++++ MY K +++ A VF+ + E + +N MISG
Sbjct: 136 RAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISG 194
Query: 109 FYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ N+ + + F + + D T ++ ++ + +IH L K G
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
Y+ + ++ Y KC ++ A +F E D+V +NAM++GY GE +L +F+ +
Sbjct: 255 HDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
G ++ + ++S + + G +HG +K + S V AL +Y K +
Sbjct: 315 LSG---AKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIE 371
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ EK + SWN++++ + Q G + + LF M ++ F P+ VT + +L AC+
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACA 431
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L AL G+ +H + + ++++ AL+ MY KCGS+ +A+ +F M K
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESS--------IYVSTALIGMYAKCGSIAEARRLFDFMPK 483
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+ +WN MI GYG+ G G+EAL +FS M + + P VTF+ VL ACSH+G + +G E
Sbjct: 484 KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M RYG P+++HY CV+D+LGRAG L A + AMP + P VW TLL A R+H
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHK 603
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+T+LA ++++F+L+P + G +VL+SNI+ A Y + +R T +++ + K PG + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ + H F S D+SHP+ K+I+ +L L ++RE G
Sbjct: 664 EIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAG 700
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 234/492 (47%), Gaps = 16/492 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L L T++ + H+ ++ G + +T L S + YA +F ++ P+
Sbjct: 24 LDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ-RPD 82
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
VF +N ++ GF N+ L F H+R+ L P+ T+ I IH
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIH 142
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G G D ++ +GS +V Y K +E+A KVF+ +P +D +LWN M++GY + +
Sbjct: 143 GQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 218 KALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
++++VFR + E + T+ +L A+ + + G +H + K G S V+
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I +Y K + A +F DI ++N+++ + G + +L LF ++ +G +
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS 322
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +++P HL + IHGY + + + S ++ AL +Y+K +
Sbjct: 323 STLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTS--------VSTALTTVYSKLNEIE 371
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F + +K + SWN MI GY +G ++A+ +F M ++ P+ VT +LSAC+
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACA 431
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G LS G+ L+ S +I T +I M + G + EA L MP + N V W
Sbjct: 432 QLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKK-NEVTW 489
Query: 517 RTLLAASRLHGN 528
T+++ LHG+
Sbjct: 490 NTMISGYGLHGH 501
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 157/326 (48%), Gaps = 4/326 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L A L+ G +IHS +TG +T I++YSKC ++K A +F
Sbjct: 222 TTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFRE 281
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
P++ YNAMI G+ SN L F + G T L+ +M +
Sbjct: 282 FR-RPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIY- 339
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
IHG K + +AL Y K +E A K+F+E P + + WNAM++GY Q
Sbjct: 340 --AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G A+ +FR M + T+T +LSA +G G+ VH +V ++S + V
Sbjct: 398 NGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
ALI MY K + EA +F+ M +K+ +WN++++ + G+ L +F ML++G
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGI 517
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQI 358
P VTF VL ACSH + G +I
Sbjct: 518 APTPVTFLCVLYACSHAGLVKEGDEI 543
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/596 (32%), Positives = 320/596 (53%), Gaps = 27/596 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEP 97
LQ C +L++G+ +H+ ++ +G + + + LI MYS C + AL +F +
Sbjct: 177 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-RR 235
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++ ++SG N L F MR+ GV P ++ + + A L +
Sbjct: 236 NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCT 295
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+G D ++++ S L + Y KC + EA +VF+++P +D V W AM++GYA+ G
Sbjct: 296 ASA-SVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLE 354
Query: 218 KALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNG---RVVHGIVVKMGYDSGVPVM 273
A+ FR M +EG + + VLSA G K+G + +H V K G++ V V
Sbjct: 355 AAVLSFRDMKREGLVGADQHVFCSVLSA---SGGLKDGWLSKSIHCCVTKAGFELEVAVR 411
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWN-----SIMTVHEQCGNHDGTLRLFDRML 328
NALIDMY K V A + ++ D WN S++ + + + L ++ +
Sbjct: 412 NALIDMYAKSMDVESASRVLKI----DPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 467
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G +P+ TFS+++ C+ A L G Q+H ++ L I D F+ + L+DM
Sbjct: 468 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDL--------IRDSFVGSTLVDM 519
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCG + + +F ++ + +WN +I + G G+EA+ F M + ++P+ + F
Sbjct: 520 YGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAF 579
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
V +L+ACSH+G + +G ++ M+ +G+ P EHY+C+ID GRAG+L+EAY+ MP
Sbjct: 580 VSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP 639
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+ N W +LL A R+ G+ +L E+AAQ + +LEPG+ G +V +S IY + G++E+V
Sbjct: 640 IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKA 699
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R MR ++K PG SW++ H F S D SHP+ K IY +L LT R++E G
Sbjct: 700 VRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEG 755
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 131/583 (22%), Positives = 233/583 (39%), Gaps = 80/583 (13%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEP 97
LQ C +L++G+ +H+ ++ +G + + + LI MYS C + AL +F +
Sbjct: 27 LQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMP-RR 85
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF-------------------- 137
N ++ ++SG N L F MR+ GV P + +
Sbjct: 86 NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHCH 145
Query: 138 ----------------------------PCLIKCCCDVMAVLEVKKIHG-LVFKLGLDLD 168
L++ C + + +H LV
Sbjct: 146 SGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAS 205
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
++ + L+ Y C + AL++F +P R+ V W +V+G +Q AL F M +
Sbjct: 206 TFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRR 265
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G+ +RF ++ A +G R +G+D+ + V + L DMY K + E
Sbjct: 266 AGVAPTRFALSSAARAAAALGAPLRARSCTA-SASVGFDTELFVASNLADMYSKCGLLSE 324
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF-QPDLVTFSTVLPACS 347
A +F+ M +KD +W +++ + + G+ + + F M G D F +VL A
Sbjct: 325 ACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASG 384
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L + IH + G +V + NAL+DMY K + A V K
Sbjct: 385 GLKDGWLSKSIHCCVTKAGFEL--------EVAVRNALIDMYAKSMDVESASRVL----K 432
Query: 408 KDVASWNI-----MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
D WN+ MI GY +EAL ++ + ++P+E TF ++ C+ L
Sbjct: 433 IDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLE 492
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE---ANPVVWRTL 519
QG + L + ++ + ++DM G+ G ++ L++ + NE + W +
Sbjct: 493 QGAQ-LHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS----LSMQLFNEIEYRTDIAWNAV 547
Query: 520 LAASRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNIYVAG 560
+ HG+ A A R+ + P H L++ AG
Sbjct: 548 INVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAG 590
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 21/176 (11%)
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
V +++L +C L GR +H +V++G A + F+ N L+ MY+ C +
Sbjct: 21 VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAAST-------FLANHLITMYSHCADLA 73
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD----EVTFVGVL 452
A +F M +++ SW ++ G + +AL F+ M A + P E F L
Sbjct: 74 SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133
Query: 453 SACSHSGFLSQGREFLPLMESRYG---------VVPTIEHYTCVIDMLGRAGQLNE 499
H+ S LM +G T H ++ GRAG L
Sbjct: 134 GP-KHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRR 188
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 321/600 (53%), Gaps = 24/600 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
TC +L C+ NL G+ IH +L G+ + SLI+MYSKC Q+ YA +F++
Sbjct: 162 TCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH- 220
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC------CDV 147
S + + ++N++I+G+ N + L M Q G+ + YT +K C C +
Sbjct: 221 SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKM 280
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ +H KLGL LDV +G+AL++ Y K +++A+++F+++ ++VV++NAM+
Sbjct: 281 FGTM----LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMM 336
Query: 208 NGYAQIGEF-----HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
G Q +KAL +F M GI S FT + +L A I++ FK + VH ++
Sbjct: 337 AGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMC 396
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
K G S + + LID+Y + +AL F + I +++ + Q G + L
Sbjct: 397 KNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALS 456
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF +L+ +PD ST++ +C+++ L G QI G+ G+++ +F N
Sbjct: 457 LFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRF-------TIFQN 509
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
+ + MY K G + A + F +M D+ SW+ MI G EAL F M ++
Sbjct: 510 SQIW-MYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIE 568
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+ F+GVL ACSH G + +G + ME Y + ++H CV+D+LGRAG+L +A
Sbjct: 569 PNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAES 628
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L L + E PV+WR LL+A R+H +T A+ AQ+V +LEP +YVL+ NIY+ G
Sbjct: 629 LILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGN 688
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+R M ++ ++K PG SWI++ D +++F+S DRSH + IYA+L + A +
Sbjct: 689 KLAASKVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKR 748
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 155/560 (27%), Positives = 272/560 (48%), Gaps = 40/560 (7%)
Query: 8 INPFSSCFNFSTSSGN--QTFNHPFTLATC--IASLQLCAHQTNLQKGQEIHSYMLRTGI 63
I F++ + S SS ++ F L + + +Q L G+ +HS+M++T
Sbjct: 31 IESFATLGSVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSF 90
Query: 64 IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
+L+NMY KC + A +F+ +S + N+ TYN++ISG+ K + F+
Sbjct: 91 RPCLFLQNNLLNMYCKCGDTRSADKLFDKMS-KSNIVTYNSLISGYVQMSNLDKVMILFD 149
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
R+LG+ DKYT + C + K IHGL+ GL V + ++L++ Y KC
Sbjct: 150 KARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCG 209
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
++ A +F+ D V WN+++ GY Q G++ + L + ++M + G+ + +T+ L
Sbjct: 210 QVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269
Query: 244 ALI--MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
A G G ++H +K+G V V AL+DMY K + +A++IF+ M +K++
Sbjct: 270 ACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329
Query: 302 FSWNSIM-------TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
+N++M T+ ++C L LF M S G +P + T+S++L AC +
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYK--ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKF 387
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
+Q+H + NGL + D ++ + L+D+Y+ GSM DA + F + +
Sbjct: 388 AKQVHALMCKNGL--------LSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMT 439
Query: 415 IMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
MI GY +G+ + AL +F + + KPDE ++S+C++ G L G + + ++
Sbjct: 440 AMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQ-IQGHATK 498
Query: 475 YGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP--VVWRTLLAASRLHGNTDLA 532
G+ I M ++G L Y L NP V W T++ ++ HG+
Sbjct: 499 VGISRFTIFQNSQIWMYAKSGDL---YAANLTFQQMENPDIVSWSTMICSNAQHGHA--- 552
Query: 533 EIAAQRVFQL------EPGH 546
+ A R F+L EP H
Sbjct: 553 -MEALRFFELMKSCGIEPNH 571
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/573 (30%), Positives = 313/573 (54%), Gaps = 10/573 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+IH+++++ G + + SL++ Y K + A +F ++ + T+N++++G+ +
Sbjct: 161 QIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMTGYSNE 219
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ ++ F + G+ P +TF L+ + +++HG V K +V++G
Sbjct: 220 GLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVG 279
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL++ Y K ++E K+F E+P D + +N ++ YA G+F ++ ++FR++
Sbjct: 280 NALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFD 339
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+F +LS + GR +H + +G + V NAL+DMY K EA +I
Sbjct: 340 RRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKI 399
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F+ + K W ++++ + Q G H+ + +F M G D TF+++L AC++LA++
Sbjct: 400 FDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASI 459
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
GRQ+H ++ +G N V+ +AL+D Y KCG M DA F +M +++ S
Sbjct: 460 SLGRQLHSLLIRSGFMSN--------VYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I Y +G L+ F M ++ KPD V+F+ VLSACSH GF+ + M
Sbjct: 512 WNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMT 571
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
Y V P EHYT ++D+L R G+ +EA +L MP E + ++W ++L + R+H N +LA
Sbjct: 572 QIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELA 631
Query: 533 EIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
+ AA R+F +E Y+ MSNIY G+++ V ++ MR + VRK P SW+E+K
Sbjct: 632 KKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKH 691
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F ++D+SHPE K I ++++L+ + + G
Sbjct: 692 QTHVFSANDKSHPEMKKILRKINALSKEMEKKG 724
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 252/513 (49%), Gaps = 15/513 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
F TC ++ Q+ L++G +H++ + + + +S+ +I+ + K ++ A
Sbjct: 39 FNPNTCRSNFQV---NNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARE 95
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + E ++ +I G+ ++ + + + MR+ G+ PD T L+ ++
Sbjct: 96 LFDGM-VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELE 154
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +IH V KLG + ++ + ++LV+ Y K + A ++F+ + +D V +N+++
Sbjct: 155 TKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMT 214
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+ G +A+E+F + GI S FT +LSA + + K G+ VHG V+K +
Sbjct: 215 GYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVW 274
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V NAL+D Y K V E ++F M E D S+N ++T + G + LF ++
Sbjct: 275 NVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQ 334
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
F F+T+L + L GRQIH + G + NAL+DM
Sbjct: 335 FTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVE--------NALVDM 386
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC ++AQ +F ++ K W MI Y G+ +E +++FS M + D+ TF
Sbjct: 387 YAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATF 446
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+L AC++ +S GR+ L+ R G + + + ++D + G + +A + MP
Sbjct: 447 ASILRACANLASISLGRQLHSLL-IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
E N V W L++A +GN D + Q++ Q
Sbjct: 506 -ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 161/298 (54%), Gaps = 1/298 (0%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++H ++L+T + + +L++ YSK Q+ +F + E + +YN +I+ +
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMP-ELDGISYNVVITSYA 318
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + D F ++ ++ F L+ + + ++IH +G + +
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR 378
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +ALV+ Y KC +EA K+F+ + + V W AM++ Y Q G+ + + VF M + G
Sbjct: 379 VENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTG 438
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T +L A + GR +H ++++ G+ S V +AL+D Y K C+ +A+
Sbjct: 439 VPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAI 498
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+ F M E++ SWN++++ + Q GN DGTL F +M+ +G++PD V+F +VL ACSH
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSH 556
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 45/345 (13%)
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
I + K G + + + VN +L+ + A +VF+++P ++ + N M++G+ + G+
Sbjct: 30 IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89
Query: 216 FHKALEVFRRM--------------------SKE-----------GIWMSRFTVTGVLSA 244
KA E+F M SKE GI T+ +LS
Sbjct: 90 LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSG 149
Query: 245 LIMMGFFKNGRV---VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
G + V +H V+K+GY+ + V N+L+D Y K C+ A ++F+ M KD
Sbjct: 150 F---GELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDT 206
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
++NS+MT + G ++ + LF + ++G +P TF+ +L A L G+Q+HG+
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGF 266
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
++ N VF+ NAL+D Y+K + + +F +M + D S+N++I Y
Sbjct: 267 VLKTNFVWN--------VFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYA 318
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+GQ KE+ D+F + + + F +LS + S L GR+
Sbjct: 319 WNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQ 363
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P AT + L+ CA+ ++ G+++HS ++R+G + + S ++L++ Y+KC M A+
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F + E N ++NA+IS + N L+ F M Q G PD +F ++ C
Sbjct: 500 SFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 149 AVLEVK---KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWN 204
V E ++++ + Y +++V+ + +EA K+ E+P ++W+
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHY--TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWS 616
Query: 205 AMVNG 209
+++N
Sbjct: 617 SVLNS 621
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 211/662 (31%), Positives = 324/662 (48%), Gaps = 104/662 (15%)
Query: 58 MLRTGIIDSPLSITSLINMYS--KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
ML TG I + + LI + + Y +FN + N F +N MI + +
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIE-NTNCFMWNMMIRAYIQTNSP 59
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ M + D YT+P LI+ C + E K++H V KLG D DVY+ + L
Sbjct: 60 HFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTL 119
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+N + C M +A +VF E + D V WN+++ GY +IG +A ++ +M + I S
Sbjct: 120 INCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN 179
Query: 236 -----FTVTGVL------------------SALI---------------MMGFFKNGRVV 257
F + G++ SALI +G K G +V
Sbjct: 180 SMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMV 239
Query: 258 ------------------------HGIVVKMGYDSGVPVMNALIDMYGKG---------- 283
H + +K+G +S + + NALI MY K
Sbjct: 240 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 299
Query: 284 -------------------KC--VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
KC V A IF+ M EKD+ SW+S+++ + Q D TL
Sbjct: 300 DEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLA 359
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF M +GF+PD T +V+ AC+ LAAL G+ +H YI NGL N V +
Sbjct: 360 LFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTIN--------VILG 411
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
L+DMY KCG + A VF M +K +++WN +ILG M+G + +LDMFS M + +
Sbjct: 412 TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVT 471
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
P+E+TF+GVL AC H G + +G+ M + + P ++HY C++D+LGRAG+L EA E
Sbjct: 472 PNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEE 531
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L MP + W LL A + HG++++ +++ +L+P H G +VL+SNIY + GK
Sbjct: 532 LLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGK 591
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+++VL+IR M + V K PGCS IE +H F++ D++HP+ +I L + +L+
Sbjct: 592 WDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKL 651
Query: 623 HG 624
G
Sbjct: 652 EG 653
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 213/513 (41%), Gaps = 112/513 (21%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+Q C+ + + + +++H+++L+ G +LIN +S C M A VFN S +
Sbjct: 85 IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDS 144
Query: 99 VFTYNAMISGFY----------------------SND----FAFKGL-----DFFNHMRQ 127
V ++N++++G+ SN F +GL F+ M +
Sbjct: 145 V-SWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLE 203
Query: 128 LGVLPDKYTFPCLIKC-----------------------------------CCDVMAVLE 152
D T+ LI C C +++ V
Sbjct: 204 ----KDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259
Query: 153 VKKIHGLVFKLGLDLDVYIGSAL-------------------------------VNTYLK 181
K IH L K+G + + + +AL ++ YLK
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319
Query: 182 CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGV 241
C ++ A +F+ +P +DVV W++M++GYAQ F + L +F+ M G T+ V
Sbjct: 320 CNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSV 379
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+SA + + G+ VH + + G V + LIDMY K CV ALE+F M EK I
Sbjct: 380 ISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGI 439
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
+WN+++ G + +L +F M P+ +TF VL AC H+ + G Q H Y
Sbjct: 440 STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEG-QHHFY 498
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGY 420
+++ + K ++D+ + G +++A+ + +M DVA+W ++
Sbjct: 499 SMIHDHKIQPNVKHY------GCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
G + + + E L+PD F +LS
Sbjct: 553 KKHGDSEMGRRVGRKLIE--LQPDHDGFHVLLS 583
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++ + CA L++G+ +H+Y+ R G+ + + T+LI+MY KC ++ AL VF
Sbjct: 374 TTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYG 433
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E + T+NA+I G N LD F++M++ V P++ TF ++ C + V E
Sbjct: 434 M-IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 492
Query: 153 VK-KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGY 210
+ + ++ + +V +V+ + ++EA ++ +P+ DV W A++
Sbjct: 493 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552
Query: 211 AQIGEFHKALEVFRRM 226
+ G+ V R++
Sbjct: 553 KKHGDSEMGRRVGRKL 568
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/583 (33%), Positives = 327/583 (56%), Gaps = 20/583 (3%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN--VF 100
++ +L + +H+++L++G + S LI+ Y KC + A +F+ + PN +
Sbjct: 12 TNKKSLTTLKSLHTHILKSGSLFSFFG-HKLIDGYIKCSVITEARKLFDEM---PNRHIV 67
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
T+N+MIS S + ++ +++M GVLPD YTF + K ++ E +K HGL
Sbjct: 68 TWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLA 127
Query: 161 FKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
LG ++ D ++ + +V+ Y K M++A VF+ + +DVVL+ A++ GY Q G +A
Sbjct: 128 VVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEA 187
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
LEVF M I + +T+ VL + +G NG+++HG+VVK G +S V +L+ M
Sbjct: 188 LEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTM 247
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y K V +++++F + +W S + Q G + L +F M+ P+ TF
Sbjct: 248 YSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTF 307
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
S++L ACS LA L G QIH V G+ N +++ AL+ +Y KCG++ A+
Sbjct: 308 SSILHACSSLAMLEAGEQIHAVTVKLGVDGNK--------YVDAALIHLYGKCGNVEKAR 359
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF +++ DV S N MI Y +G G EAL++F M + KP+ VTF+ +L AC+++G
Sbjct: 360 SVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAG 419
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV--WR 517
+ +G + L+ + + + T +HYTC+ID+LGRA + EA A+ + NP V WR
Sbjct: 420 LVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA---AMLIEEGKNPDVIQWR 476
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL A ++HG ++AE +++ P G ++L++NIY + GK++ V++++ R
Sbjct: 477 TLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLR 536
Query: 578 VRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++K P SW+++ +HTF++ D SHP A I LH L ++
Sbjct: 537 LKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKV 579
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 13/317 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F G++ + +TLA+ + S C + +L G+ IH ++++G+ S TSL+ M
Sbjct: 191 FEDMVGSRIKPNEYTLASVLVS---CGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTM 247
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
YSKC ++ ++ VFN+L+ +V T+ + I G N L F M + + P+ +T
Sbjct: 248 YSKCNMVEDSIKVFNSLAYASHV-TWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFT 306
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
F ++ C + + ++IH + KLG+D + Y+ +AL++ Y KC +E+A VFE L
Sbjct: 307 FSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
DVV N M+ YAQ G H+ALE+F RM K G + T +L A G + G
Sbjct: 367 ELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQ 426
Query: 257 VHGIV-----VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
+ ++ +++ D +ID+ G+ K EA + E + D+ W +++
Sbjct: 427 IFSLIRNNHSIELTRDH----YTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNAC 482
Query: 312 EQCGNHDGTLRLFDRML 328
+ G + + +ML
Sbjct: 483 KIHGEVEMAEKFMKKML 499
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 297/574 (51%), Gaps = 81/574 (14%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
++ +R + PD + P +K C A + +H GL D ++ S+L+++Y+
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSLLHSYI 63
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
+ A VF+ +P ++VV W+A++ GY+ G+ A + +M G+ + T G
Sbjct: 64 RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123
Query: 241 VLS-------------ALIMM---GFFKN-------------------GRVVHGIVVKMG 265
++S AL+ M GFF + G+ VHG VVK G
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG 183
Query: 266 YDSGVPVMNALIDMYGK-------------------GKC------------VGEALEIFE 294
V+ ALIDMYGK C V EAL +F
Sbjct: 184 CRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFR 243
Query: 295 MM----EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
E ++ SW SI+ Q G + LF M S G +P+ VT VLPA +++A
Sbjct: 244 EFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVA 303
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
ALMHGR H + + G + DV++ +AL+DMY KCG R A+ +F M ++V
Sbjct: 304 ALMHGRSAHCFSLRKGF--------LHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNV 355
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI GY M G A+ +F M + K KPD VTF VL ACS +G +GR +
Sbjct: 356 VSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNE 415
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M+ +G+ P +EHY C++ +LGR+G+L+EAY+L MP E + +W +LL + R++GN
Sbjct: 416 MQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVL 475
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
LAE+AA+++FQLEPG+ GNYVL+SNIY + ++ V +R M+ ++K GCSWIE+K
Sbjct: 476 LAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIK 535
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +H ++ D SHP +I +L+ LT + G
Sbjct: 536 NKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLG 569
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 132/297 (44%), Gaps = 35/297 (11%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
EPNV T+N ++SG + A + M G PD C + DV V K+
Sbjct: 115 EPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQ 174
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA---- 211
+HG V K G LD + +AL++ Y KC +E ++VF E DV NA+V G +
Sbjct: 175 VHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQ 234
Query: 212 -------------------------------QIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
Q G +A+++FR M G+ + T+
Sbjct: 235 VSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPC 294
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VL A + +GR H ++ G+ V V +AL+DMY K A IF+ M ++
Sbjct: 295 VLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRN 354
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQ 357
+ SWN+++ + G+ ++LF M +PDLVTF+ VL ACS GR+
Sbjct: 355 VVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 48/300 (16%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKC------------------------------ 80
G+++H Y+++ G +T+LI+MY KC
Sbjct: 172 GKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSR 231
Query: 81 -CQMKYALFVFNNLSC---EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Q+ AL +F C E NV ++ ++++ N + +D F M+ +GV P+ T
Sbjct: 232 NAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVT 291
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
PC++ +V A++ + H + G DVY+GSALV+ Y KC A +F+ +P
Sbjct: 292 IPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMP 351
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
R+VV WNAM+ GYA G+ A+++F M K T T VL A G + GR
Sbjct: 352 SRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411
Query: 257 V-------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIM 308
HGI +M + + ++ + G+ + EA ++ EM E D W S++
Sbjct: 412 YFNEMQQGHGISPRMEHYA------CMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLL 465
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+H +L F R +S F PD + L +C A R +H VV+GLA
Sbjct: 2 SHSNSLYHFLRHVS--FPPDPHLLPSALKSCP---AQPLARALHAAAVVSGLA------- 49
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+D F+ ++L+ Y + G+ A+ VF +M +K+V W+ +I GY G + A +
Sbjct: 50 -EDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQ 108
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
M A ++P+ +T+ G++S + SG L M S G P +C + +G
Sbjct: 109 MRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSE-GFFPDATGVSCALSAVG 164
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
A+ L G+ H + LR G + ++L++MY+KC + ++A +F+ + NV ++
Sbjct: 300 ANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSR-NVVSW 358
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-IHGLVF 161
NAMI G+ + A + F M++ PD TF C++ C E ++ + +
Sbjct: 359 NAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQ 418
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
G+ + + +V + ++EA + E+P D +W +++
Sbjct: 419 GHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLL 465
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 320/573 (55%), Gaps = 15/573 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G +IH L+ G + SLI++YS+ + A +F+ + ++ ++NAMISG+
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYC 227
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ A + L N +R + D T L+ C + IH K GL+ +++
Sbjct: 228 QSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L++ Y + + + KVF+ + +RD++ WN+++ Y + +A+ +F+ M
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY-DSGVPVMNALIDMYGKGKCVGEA 289
I T+ + S L +G + R V G ++ G+ + + NA++ MY K V A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSH 348
+F + D+ SWN+I++ + Q G + +++ M G + T+ +VLPACS
Sbjct: 404 RAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ 463
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
AL G ++HG ++ NGL DVF+ +L DMY KCG + DA +F ++ +
Sbjct: 464 AGALRQGMKLHGRLLKNGLYL--------DVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
+ WN +I +G G G++A+ +F M + +KPD +TFV +LSACSHSG + +G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+M++ YG+ P+++HY C++DM GRAGQL A + +M + + +W LL+A R+HGN
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
DL +IA++ +F++EP H G +VL+SN+Y + GK+E V +IR + +RK PG S +E
Sbjct: 636 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSME 695
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+ + + F + +++HP + +Y EL +L A+L+
Sbjct: 696 VDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 262/513 (51%), Gaps = 21/513 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
TNLQ + +H+ ++ + I + L+N+Y + A F+++ +V+ +N M
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ-NRDVYAWNLM 123
Query: 106 ISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
ISG+ + + + F+ M G+ PD TFP ++K C V++ KIH L K G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFG 180
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DVY+ ++L++ Y + + + A +F+E+P+RD+ WNAM++GY Q G +AL +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSN 240
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+ M TV +LSA G F G +H +K G +S + V N LID+Y +
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ + ++F+ M +D+ SWNSI+ +E + LF M + QPD +T ++
Sbjct: 297 RLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLAS 356
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
S L + R + G+ + G ++D+ + NA++ MY K G + A+ VF
Sbjct: 357 ILSQLGDIRACRSVQGFTLRKGWF-------LEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ DV SWN +I GY +G EA++M++ M E ++ ++ T+V VL ACS +G L Q
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G + + + G+ + T + DM G+ G+L +A L +P N V W TL+A
Sbjct: 470 GMKLHGRL-LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACH 527
Query: 524 RLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMS 554
HG+ + A + + + ++P H L+S
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 195/434 (44%), Gaps = 44/434 (10%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L C + +G IHSY ++ G+ LI++Y++ +++ VF+ +
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
++ ++N++I + N+ + + F MR + PD T L + +
Sbjct: 309 YVR-DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 154 KKIHGLVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
+ + G + G L D+ IG+A+V Y K ++ A VF LP DV+ WN +++GYAQ
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 213 IGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G +A+E++ M +EG I ++ T VL A G + G +HG ++K G V
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 487
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V+ +L DMYGK + +AL +F + + WN+++ H G+ + + LF ML G
Sbjct: 488 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 547
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD +TF T+L ACSH + L+D
Sbjct: 548 VKPDHITFVTLLSACSH----------------------------------SGLVDEGQW 573
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C M T K + M+ YG GQ + AL M L+PD + +
Sbjct: 574 CFEMMQTDYGITPSLKH----YGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGAL 626
Query: 452 LSACSHSGFLSQGR 465
LSAC G + G+
Sbjct: 627 LSACRVHGNVDLGK 640
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 203/611 (33%), Positives = 319/611 (52%), Gaps = 37/611 (6%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL K +E+ M + S ++++ Y++ + A VF+ + E N ++NA++
Sbjct: 136 NLGKARELFERMPERDVC----SWNTILSGYAQNGCVDDARRVFDRMP-EKNDVSWNALL 190
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + N + F ++ ++ CL+ ++E ++ F
Sbjct: 191 SAYVQNSKLEEACVLFGSRENWALV----SWNCLLGGFVKKKKIVEARQF----FDSMKV 242
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV + ++ Y + ++EA ++F+E P+ DV W AMV+GY Q +A E+F RM
Sbjct: 243 RDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM 302
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD----SGVPVMNALIDMYGK 282
+ V ++ G+ + RV + K +D V N +I Y +
Sbjct: 303 PER---------NEVSWNAMLAGYVQGERVE---MAKELFDVMPCRNVSTWNTMITGYAQ 350
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ EA +F+ M ++D SW +++ + Q G+ LRLF M G + + +FS+
Sbjct: 351 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSA 410
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L C+ + AL G+Q+HG +V G F+ NAL+ MY KCGS+ +A +F
Sbjct: 411 LSTCADVVALELGKQLHGRLVKGGYETG--------CFVGNALLLMYCKCGSIEEANDLF 462
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+M+ KD+ SWN MI GY G G+EAL F M LKPD+ T V VLSACSH+G +
Sbjct: 463 KEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 522
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+GR++ M YGV P +HY C++D+LGRAG L EA+ L MP E + +W TLL A
Sbjct: 523 KGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGA 582
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
SR+HGNT+LAE AA ++F +EP + G YVL+SN+Y + G++ +V +R MR + V+K P
Sbjct: 583 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 642
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFE 642
G SWIE+++ HTF D HPE I+A L L R+++ G ++ D E
Sbjct: 643 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKE 702
Query: 643 KHRLYLEEVIA 653
+ Y E +A
Sbjct: 703 RMVRYHSERLA 713
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 127/508 (25%), Positives = 224/508 (44%), Gaps = 88/508 (17%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITSL-INMYSKCCQMKYALFVFNNLSCEPNVFTYN 103
QT +QK Q + ++G DS + ++ I+ Y + + AL VF + +V +YN
Sbjct: 40 QTQIQKSQT--KPLPKSG--DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSV-SYN 94
Query: 104 AMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
AMISG+ N +F + F+ M P++
Sbjct: 95 AMISGYLRNGEFELARM-LFDEM------PER---------------------------- 119
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
D+ + ++ Y++ + + +A ++FE +P RDV WN +++GYAQ G A V
Sbjct: 120 -----DLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRV 174
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV-MNALIDMYG 281
F RM ++ + + +LSA + +N ++ V+ ++ V N L+ +
Sbjct: 175 FDRMPEK----NDVSWNALLSA-----YVQNSKLEEACVLFGSRENWALVSWNCLLGGFV 225
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------MLSA 330
K K + EA + F+ M+ +D+ SWN+I+T + Q G D +LFD M+S
Sbjct: 226 KKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSG 285
Query: 331 GFQPDLVTFSTVL----PACSH------LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
Q +V + L P + LA + G ++ + L C+++
Sbjct: 286 YIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVE---MAKELFDVMPCRNVSTW- 341
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
N ++ Y +CG + +A+ +F KM K+D SW MI GY G EAL +F M
Sbjct: 342 --NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREG 399
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ + +F LS C+ L G++ L++ Y + + ++ M + G + E
Sbjct: 400 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--ALLLMYCKCGSIEE 457
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHG 527
A +L M + + V W T++A HG
Sbjct: 458 ANDLFKEMAGK-DIVSWNTMIAGYSRHG 484
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 68/381 (17%)
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
D D+ + +++Y++ EAL+VF+ +P V +NAM++GY + GEF A +F
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDE 115
Query: 226 MSKEGI--WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
M + + W N +I Y +
Sbjct: 116 MPERDLVSW-----------------------------------------NVMIKGYVRN 134
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-----------LSAGF 332
+ +G+A E+FE M E+D+ SWN+I++ + Q G D R+FDRM LSA
Sbjct: 135 RNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYV 194
Query: 333 QPDLVTFSTVLPACSHLAALMHGR-QIHGYIVVNGLAKNGSCKD---IDDVFMNNALMDM 388
Q + + VL AL+ + G++ + + D + DV N ++
Sbjct: 195 QNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITG 254
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y + G + +A+ +F + DV +W M+ GY + +EA ++F M E +EV++
Sbjct: 255 YAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMPER----NEVSW 310
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+L+ + +E +M R + + +I + G+++EA L MP
Sbjct: 311 NAMLAGYVQGERVEMAKELFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMP 365
Query: 509 NEANPVVWRTLLAASRLHGNT 529
+PV W ++A G++
Sbjct: 366 KR-DPVSWAAMIAGYSQSGHS 385
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA L+ G+++H +++ G +L+ MY KC ++ A +F ++ +
Sbjct: 409 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 468
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK- 155
++ ++N MI+G+ + F + L FF M++ G+ PD T ++ C V + ++
Sbjct: 469 -DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 527
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM-----VNG 209
H + G+ + + +V+ + +EEA + + +P D +W + V+G
Sbjct: 528 FHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHG 587
Query: 210 YAQIGE 215
++ E
Sbjct: 588 NTELAE 593
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/571 (33%), Positives = 312/571 (54%), Gaps = 27/571 (4%)
Query: 53 EIHSYMLRTGIIDSPLSITSLIN-MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+IH+ ++ T +I + + L++ + SK + YA VF + +PN F N M+ +
Sbjct: 29 QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH-QPNSFICNTMVKCYTE 87
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + L F+ MR+ G+L D YT+P ++K C + +LE + G K G DV++
Sbjct: 88 SSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L++ Y +C A VF+ +D+V WN+M+ GY GE A +F M + +
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV-----MNALIDMYGKGKCV 286
+ G MG RV +DS +P N++ID Y K +
Sbjct: 208 VSWSIMIDGYGKK---MGEVNRARVF--------FDS-MPTRDLVSWNSMIDGYAKVGEM 255
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A EIF+ M +K++ SW+ ++ + Q + L LF +ML G +PD V+ + AC
Sbjct: 256 EVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSAC 315
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S L AL GR IH Y+ N + + D+ + AL+DMY KCGS +A+ +F M
Sbjct: 316 SQLGALDQGRWIHLYMKRNRM--------LLDIVVQTALVDMYLKCGSRDEARRIFNSMP 367
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+++V SWN+MI+G GM+G GKEAL+ F+ M ++ D++ F+GVL ACSH+ +++G
Sbjct: 368 ERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEGLH 427
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M+ Y + P +EHY C++D+LGRAGQL++ + +MP + N +W +LL A R+H
Sbjct: 428 IFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIH 487
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
N LAEI +R+ +L+ G YVLMSNIY G +E +L IR M+++ ++K+ G S
Sbjct: 488 QNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSV 547
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
IE+ + F+S ++SH + I + SL
Sbjct: 548 IEVDGNVEEFVSGEKSHILREEIELVIWSLA 578
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ + ++ C+ L +G+ IH YM R ++ + T+L++MY KC A +FN++
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNSM 366
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE- 152
E NV ++N MI G N F + L+ F M + D F ++ C V E
Sbjct: 367 P-ERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEG 425
Query: 153 ---VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
++ G V++L L+ Y LV+ + +++ + + +P++ + LW +++
Sbjct: 426 LHIFNQMKG-VYRLEPKLEHY--GCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 298/557 (53%), Gaps = 12/557 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F LA+ ++ C+ ++ G++IH Y RT + +LI++Y KC ++ A +
Sbjct: 239 FVLASAASA---CSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRL 295
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ N+ ++ MI+G+ N + + F + Q G PD + ++ C + A
Sbjct: 296 FDSMENR-NLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAA 354
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +++H V K L+ D Y+ +AL++ Y KC+ + EA VFE L D + +NAM+ G
Sbjct: 355 IWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 414
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA++G+ A+E+F +M + S T +L + + +HG++VK G
Sbjct: 415 YARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLD 474
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ +ALID+Y K V +A +F +M+ +D+ WN+++ Q + ++LF R+
Sbjct: 475 LYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRV 534
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
+G P+ TF ++ S LA++ HG+Q H I+ G D ++NAL+DMY
Sbjct: 535 SGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADS--------DPHISNALIDMY 586
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + + +++F KDV WN MI Y G +EAL +F M A ++P+ VTFV
Sbjct: 587 AKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFV 646
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VLSAC+H+G + +G M+++Y V P EHY V+++ GR+G+L+ A E MP
Sbjct: 647 SVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPI 706
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E +WR+LL+A L GN ++ A + +P G VLMSNIY + G + + +
Sbjct: 707 EPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKL 766
Query: 570 RHTMRQQNVRKNPGCSW 586
R M V K PG SW
Sbjct: 767 RQGMDCAGVVKEPGYSW 783
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 259/497 (52%), Gaps = 13/497 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L+ CA + G+++H + G+ + T+L+N+Y+K ++ A+ VF+ L
Sbjct: 142 SALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPAR 201
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N T+ A+I+G+ A L+ F M GV PD++ C + V ++I
Sbjct: 202 -NPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HG ++ + D + +AL++ Y KC + A ++F+ + R++V W M+ GY Q
Sbjct: 261 HGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLD 320
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A+ +F ++S+ G F T +L++ + GR VH V+K +S V NAL
Sbjct: 321 TEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNAL 380
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMY K + + EA +FE + E D S+N+++ + + G+ G + +F +M +P L
Sbjct: 381 IDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSL 440
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+TF ++L S + L +QIHG IV +G + D++ +AL+D+Y+K +
Sbjct: 441 LTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSL--------DLYAGSALIDVYSKFSLVD 492
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
DA++VF+ M +D+ WN MI G + +G+EA+ +F+ + + L P+E TFV +++ S
Sbjct: 493 DAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVAS 552
Query: 457 HSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
+ G++F ++++ P I + +IDM + G + E L + +
Sbjct: 553 TLASIFHGQQFHAQIIKAGADSDPHISN--ALIDMYAKCGFIEEG-RLLFESTLGKDVIC 609
Query: 516 WRTLLAASRLHGNTDLA 532
W ++++ HG+ + A
Sbjct: 610 WNSMISTYAQHGHAEEA 626
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/498 (28%), Positives = 252/498 (50%), Gaps = 19/498 (3%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H+ + +G++ L+ YSK ++ A +F+++ N+ ++ + IS + +
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSR-NLVSWGSAISMYAQHGR 111
Query: 115 AFKGLDFFNHMRQLGVL------PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
L F G P+++ ++ C A +++HG+ KLGLD +
Sbjct: 112 EDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN 171
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
V++G+ALVN Y K ++ A+ VF+ LP R+ V W A++ GY+Q G+ ALE+F RM
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGL 231
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
+G+ RF + SA +GF + GR +HG + +S V+NALID+Y K +
Sbjct: 232 DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ ME +++ SW +++ + Q + +F ++ AG+QPD+ +++L +C
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
LAA+ GRQ+H +++ L D ++ NAL+DMY KC + +A+ VF +++
Sbjct: 352 LAAIWQGRQVHAHVIKADLES--------DEYVKNALIDMYAKCEHLTEARAVFEALAED 403
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
D S+N MI GY G A+++F M LKP +TFV +L S L ++
Sbjct: 404 DAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIH 463
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL--AASRLH 526
L+ + G + + +ID+ + +++A +L ++ + V+W ++ A
Sbjct: 464 GLI-VKSGTSLDLYAGSALIDVYSKFSLVDDA-KLVFSLMQNRDMVIWNAMIFGLAQNER 521
Query: 527 GNTDLAEIAAQRVFQLEP 544
G + A RV L P
Sbjct: 522 GEEAVKLFARLRVSGLTP 539
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/617 (32%), Positives = 323/617 (52%), Gaps = 24/617 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ A ++L+ G ++H+ +++ G + +LI+MY+KC ++ A VF+ + E N
Sbjct: 11 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP-ERN 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A++ GF + A + L F MR G P+++T +K C +IHG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G + + ++LV Y K ++ +A +VF+ +P R++ WN+M++GYA G+
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 219 ALEVFRRMSKEGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNA 275
+L VFR M + FT +L A +G + G VH + G S + A
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+D+Y K + A+++F+ +E ++ W +++ H Q G + LF R S+G + D
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 307
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSCKDIDDVFMNNALMDMYTKCG 393
S+V+ + A + G+Q+H Y GL DV + N+L+DMY KCG
Sbjct: 308 GHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL----------DVSVANSLVDMYLKCG 357
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+A F +M ++V SW MI G G G G+EA+D+F M ++ DEV ++ +LS
Sbjct: 358 LTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLS 417
Query: 454 ACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANP 513
ACSHSG + + R + + + P EHY C++D+LGRAG+L EA EL L+MP E
Sbjct: 418 ACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTV 477
Query: 514 VVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTM 573
VW+TLL+A R+H + + + ++ + NYV++SNI G++ E IR M
Sbjct: 478 GVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAM 537
Query: 574 RQQNVRKNPGCSWIELKDGLHTFI-SSDRSHPEAKSIYAELHSLTARLREH----GDC-C 627
R++ +RK GCSW E+ +H F D +HP+A I L + AR+RE GD C
Sbjct: 538 RRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARC 597
Query: 628 AGTLFDSDSTASGFEKH 644
A D +S +H
Sbjct: 598 ALHDVDEESRVESLREH 614
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R + +L A + G +H ++K+G+ S + N LIDMY K + A E+F+
Sbjct: 4 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 63
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M E+++ SW ++M G LRLF M +G P+ T S L AC
Sbjct: 64 GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRA 121
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G QIHG V G + DV + N+L+ MY+K DA+ VF + +++A+WN
Sbjct: 122 GVQIHGVCVRTGFEGH-------DV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWN 173
Query: 415 IMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI GY GQG+++L +F M +PDE TF +L ACS G +G + M
Sbjct: 174 SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAV 233
Query: 474 RYGVVPT 480
R GV P
Sbjct: 234 R-GVSPA 239
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 301/565 (53%), Gaps = 16/565 (2%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+++HS +R G + LI +YS+C ++ A VF + P+V Y +++S
Sbjct: 156 EQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEA-PDVVGYTSLVSALCR 214
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N + +D M + G+ P+++T ++ C + ++IHG + K+ VY
Sbjct: 215 NGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPRGIG----EQIHGYMLKVMGSQSVYA 270
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+AL++ Y + A VFE L ++VV W +M+ + G AL VF M EG+
Sbjct: 271 STALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGV 330
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
+ F + LSA G GR +H +K + + V NAL+ MYG+ V E
Sbjct: 331 QPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEA 387
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
+ +E D+ SW + ++ + Q G + + L +M S GF P+ FS+ L +C+ LA
Sbjct: 388 VLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLAL 447
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GRQ+H LA C V NAL++MY+KCG + A++ F M DV
Sbjct: 448 LHQGRQLHC------LALKLGCDF--KVCTGNALINMYSKCGRIGSARLAFDVMDTHDVM 499
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SWN +I G G AL+ FS MC + +PD+ TF+ VL C+H+G + +G F M
Sbjct: 500 SWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQM 559
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
RYG+ PT HY C+IDMLGR G+ EA + MP E + ++W+TLLA+ +LH N D+
Sbjct: 560 TDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDI 619
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
++AA ++ +L +YVLMSN+Y ++ + +R M + V+K+ G SWIE+K+
Sbjct: 620 GKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKN 679
Query: 592 GLHTFISSDRSHPEAKSIYAELHSL 616
++TF++ D SHP++ SIY L L
Sbjct: 680 EVNTFVAGDMSHPDSTSIYQMLAEL 704
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 217/454 (47%), Gaps = 18/454 (3%)
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFP 138
K ++ AL +F+ + NV + ISG N F M + GV P+ +
Sbjct: 82 KSGRLGDALDLFDRMP-RKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACN 140
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
+ C A+ +++H L + G D +IGS L+ Y +C + A +VF +
Sbjct: 141 AALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAP 200
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
DVV + ++V+ + GE +A++V +M+++G+ + T+T +L A G G +H
Sbjct: 201 DVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSML-AECPRGI---GEQIH 256
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
G ++K+ V ALID Y + G A +FE +E K++ SW S+M + + G D
Sbjct: 257 GYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLD 316
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
LR+F M+S G QP+ FS L AC ++ GRQIH + L + D
Sbjct: 317 DALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDL--------MTD 365
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ ++NAL+ MY + G + + + V K+ D+ SW I +G ++A+ + M
Sbjct: 366 IRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHS 425
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
P++ F LS+C+ L QGR+ L + + G + +I+M + G++
Sbjct: 426 EGFTPNDYAFSSGLSSCADLALLHQGRQ-LHCLALKLGCDFKVCTGNALINMYSKCGRIG 484
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A LA + + + + W +L+ HG+ +LA
Sbjct: 485 SA-RLAFDVMDTHDVMSWNSLIHGLAQHGDANLA 517
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 173/365 (47%), Gaps = 17/365 (4%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
DV + ++ +K + +AL +F+ +P ++VV W ++G + G A +F M
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ + F L+A G G VH + V+ G+ + + + LI++Y + +
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A E+F ME D+ + S+++ + G + + +M G QP+ T +++L C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
G QIHGY+ L GS V+ + AL+D Y++ G A+ VF +
Sbjct: 249 RGI----GEQIHGYM----LKVMGS----QSVYASTALIDFYSRYGDFGTAKTVFENLES 296
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+V SW M+ DG+ +AL +FS M ++P+E F LSAC G + GR+
Sbjct: 297 KNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQ- 352
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ + ++ I ++ M GR+G ++E E L + V W ++A+ +G
Sbjct: 353 IHCSAIKRDLMTDIRVSNALLSMYGRSGFVSE-LEAVLGKIENPDLVSWTAAISANFQNG 411
Query: 528 NTDLA 532
++ A
Sbjct: 412 FSEKA 416
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 260/435 (59%), Gaps = 8/435 (1%)
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
K+FE +P +D+V WN ++ G A+ G + + L + R M + FT++ VL +
Sbjct: 255 KIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENV 314
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +HG ++ G D+ V V ++LIDMY K V ++ +F ++ E+D SWNSI+
Sbjct: 315 DISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIA 374
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q G D L+ F +ML A +P +FS+++PAC+HL L G+Q+HGYI NG +
Sbjct: 375 GCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDE 434
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N +F+ ++L+DMY KCG++R A+ +F +M +D+ SW MI+G + G +A
Sbjct: 435 N--------IFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDA 486
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+++F M ++P+ V F+ VL+ACSH+G + + ++ M +G+ P +EHY V D
Sbjct: 487 IELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSD 546
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+LGRAG+L EAY+ MP VW TLL+A R+H N D+AE A R+ +++P + G
Sbjct: 547 LLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGA 606
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
Y+L++NIY A +++E R ++R+ +RK P CSWIE+++ ++ F++ D SHP + I
Sbjct: 607 YILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKI 666
Query: 610 YAELHSLTARLREHG 624
+ L + + G
Sbjct: 667 REAMEVLMELMEKEG 681
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 227/500 (45%), Gaps = 55/500 (11%)
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKY 135
+YS + +L +FN L P + ++I + S+ K L F M G+ PD
Sbjct: 51 IYSHINLLHDSLRLFNTLHFPP-ALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHN 109
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE-------A 188
FP ++K C +M + + +HG + ++GLD D+Y G+AL+N Y K +F+++ A
Sbjct: 110 VFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGA 169
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL------ 242
+V +E+ R + A V +G + + + + SR VL
Sbjct: 170 SQVLDEMTERTRSVRTASV----LVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKP 225
Query: 243 -SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
S M G+ + I M DS +IFEMM EKD+
Sbjct: 226 RSEYREMEACNLGQQIKDISHSMSVDS--------------------VRKIFEMMPEKDL 265
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
SWN+I+ + + G + TL + M A +PD T S+VLP + + G++IHG
Sbjct: 266 VSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGC 325
Query: 362 IVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+ GL +V++ ++L+DMY KC + D+ VFT ++++D SWN +I G
Sbjct: 326 SIRQGLDA--------EVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCV 377
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
+G E L F M AK+KP +F ++ AC+H L G++ + +R G I
Sbjct: 378 QNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI-TRNGFDENI 436
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT-DLAEIAAQ-RV 539
+ ++DM + G + A ++ M + V W ++ LHG+ D E+ Q +
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRM-RLRDMVSWTAMIMGCALHGHALDAIELFEQMKT 495
Query: 540 FQLEPGHCGNYVLMSNIYVA 559
+EP NYV + A
Sbjct: 496 EGIEP----NYVAFMAVLTA 511
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 136/253 (53%)
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E ++ ++N +I+G N + L M + PD +T ++ + + + + K+
Sbjct: 262 EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKE 321
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IHG + GLD +VY+ S+L++ Y KC + ++ +VF L RD + WN+++ G Q G
Sbjct: 322 IHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGL 381
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
F + L+ FR+M I ++ + ++ A + G+ +HG + + G+D + + ++
Sbjct: 382 FDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 441
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+DMY K + A +IF+ M +D+ SW +++ G+ + LF++M + G +P+
Sbjct: 442 LVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPN 501
Query: 336 LVTFSTVLPACSH 348
V F VL ACSH
Sbjct: 502 YVAFMAVLTACSH 514
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL++ L L A ++ KG+EIH +R G+ +SLI+MY+KC ++ + V
Sbjct: 301 FTLSSV---LPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRV 357
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F L+ E + ++N++I+G N +GL FF M + P Y+F ++ C +
Sbjct: 358 FTLLT-ERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTT 416
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++HG + + G D +++I S+LV+ Y KC + A ++F+ + LRD+V W AM+ G
Sbjct: 417 LHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMG 476
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
A G A+E+F +M EGI + VL+A G + + + + G
Sbjct: 477 CALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAP 536
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTLRLFDRM 327
GV A+ D+ G+ + EA + M S W ++++ N D ++ +R+
Sbjct: 537 GVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRI 596
Query: 328 L 328
L
Sbjct: 597 L 597
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/597 (30%), Positives = 320/597 (53%), Gaps = 20/597 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ C + ++ + Q IH+++++TG +TSL+N+Y+KC M A +F++L N
Sbjct: 81 LQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLH-RRN 139
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V + A+++G+ N +D F M + G LP YT + C + ++ K++H
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V K LD D IG+AL + Y K ++ ++ VF+ + ++V+ W A+++ + G+
Sbjct: 200 FVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAM 259
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
L F M E I + FT+T VLS + GR+VH + +K+GY + + N+++
Sbjct: 260 GLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMY 319
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC---------GNHDG--TLRLFDRM 327
+Y K + EA +F M ++ +WN++++ H Q G L +F +
Sbjct: 320 LYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLEL 379
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G +PDL T S+VL CS L+AL G Q+H + +G + DV + AL++
Sbjct: 380 NRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGY--------LSDVVVGTALVN 431
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY+KCGS+ A F +MS + + SW MI G G ++AL +F M A ++P+++T
Sbjct: 432 MYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQIT 491
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FVGVL+AC HSG + + + +M+ Y + P ++HY C+I M + +L+EA+++ M
Sbjct: 492 FVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKM 551
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E + +W L+A R G +L AA+++ +L+ YV + N+Y++ ++++V
Sbjct: 552 DFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVS 611
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M+++ + K SWI +K+ +H+F ++ R HP +Y L L + + G
Sbjct: 612 RVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEELLDKAKGSG 668
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 203/409 (49%), Gaps = 22/409 (5%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
Y P L++ C +V E + IH + K G D+ + ++LVN Y KC M A K+F+
Sbjct: 76 YYLP-LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDS 134
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
L R+VV W A++ GY Q + + A++VF+ M + G S +T+ L+A + K G
Sbjct: 135 LHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLG 194
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +H V+K D + NAL +Y K + ++ +F+ + EK++ SW ++++ +
Sbjct: 195 KQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGEN 254
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G LR F+ ML +P+ T +TVL C AL+ GR +H + G N
Sbjct: 255 GKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYN---- 310
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY--GMD--------- 423
+ + N++M +Y KCG M +AQ++F KM ++ +WN MI G+ MD
Sbjct: 311 ----LRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQ 366
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G EAL +F + KPD T VL+ CS L QG E L + G + +
Sbjct: 367 RSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQG-EQLHAQTIKSGYLSDVVV 425
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
T +++M + G + +A + + M + W T++ HG+++ A
Sbjct: 426 GTALVNMYSKCGSIGKASKAFVEMSTR-TLISWTTMITGLAQHGHSEQA 473
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 221/429 (51%), Gaps = 23/429 (5%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L C+ +++ G+++H+++++ + P +L ++YSK + ++ VF ++ E
Sbjct: 181 ALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIG-EK 239
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV ++ A+IS N A GL FFN M + P+++T ++ CC +A++ + +H
Sbjct: 240 NVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVH 299
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L KLG ++ I ++++ YLKC M+EA +F ++ ++V WNAM++G+AQ +
Sbjct: 300 SLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLA 359
Query: 218 K-----------ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
K AL +F +++ G FT++ VL+ + G +H +K GY
Sbjct: 360 KDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGY 419
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
S V V AL++MY K +G+A + F M + + SW +++T Q G+ + L+LF+
Sbjct: 420 LSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFED 479
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M AG +P+ +TF VL AC H + + GY + + K K + D + L+
Sbjct: 480 MRLAGVRPNQITFVGVLAACCHSGMV---DEALGYFEM--MQKEYRIKPVMDHY--GCLI 532
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK-PD 444
M+ K + +A + KM + W+I+I G GK+ L ++ KLK D
Sbjct: 533 AMFVKLRRLDEAFDIINKMDFEPSEFIWSILIA--GCRNLGKQELGFYAAEQLLKLKLKD 590
Query: 445 EVTFVGVLS 453
T+V +L+
Sbjct: 591 TETYVTLLN 599
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 24/330 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL T L LC L G+ +HS ++ G + S++ +Y KC M A +
Sbjct: 277 FTLTTV---LSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQIL 333
Query: 90 FNNLSCEPNVFTYNAMISG------FYSNDFA-----FKGLDFFNHMRQLGVLPDKYTFP 138
F+ + N+ T+NAMISG +DF+ + L F + + G PD +T
Sbjct: 334 FHKMG-STNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLS 392
Query: 139 CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR 198
++ C + A+ + +++H K G DV +G+ALVN Y KC + +A K F E+ R
Sbjct: 393 SVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTR 452
Query: 199 DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
++ W M+ G AQ G +AL++F M G+ ++ T GVL+A G
Sbjct: 453 TLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEAL--- 509
Query: 259 GIVVKMGYDSGV-PVMN---ALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQ 313
G M + + PVM+ LI M+ K + + EA +I M+ E F W+ ++
Sbjct: 510 GYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRN 569
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
G + +++L + D T+ T+L
Sbjct: 570 LGKQELGFYAAEQLLKLKLK-DTETYVTLL 598
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 23 NQTFNHP--FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKC 80
N+T P FTL++ L +C+ + L +G+++H+ +++G + + T+L+NMYSKC
Sbjct: 380 NRTGKKPDLFTLSSV---LTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKC 436
Query: 81 CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
+ A F +S + ++ MI+G + + + L F MR GV P++ TF +
Sbjct: 437 GSIGKASKAFVEMSTR-TLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGV 495
Query: 141 IKCCCDVMAVLEVKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL 197
+ CC V E ++ +++ +D Y L+ ++K + ++EA + ++
Sbjct: 496 LAACCHSGMVDEALGYFEMMQKEYRIKPVMDHY--GCLIAMFVKLRRLDEAFDIINKMDF 553
Query: 198 R-DVVLWNAMVNGYAQIGE 215
+W+ ++ G +G+
Sbjct: 554 EPSEFIWSILIAGCRNLGK 572
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 298/551 (54%), Gaps = 15/551 (2%)
Query: 41 LCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNV 99
L A +T +L+KG+E+H+Y L+ G+ + T +++MY+KC ++K A F +L ++
Sbjct: 336 LAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGR-DL 394
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGL 159
++A +S + + L F M+ G+ PDK L+ C ++ + K +H
Sbjct: 395 VVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCY 454
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
V K + D+ + + LV+ Y +C+ A+ +F + +DVV WN ++NG+ + G+ A
Sbjct: 455 VIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLA 514
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
LE+F R+ G+ T+ +LSA ++ G HG ++K G +S + V ALIDM
Sbjct: 515 LEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDM 574
Query: 280 YGKGKCVGEALEIFEMMEE-KDIFSWNSIMT--VHEQCGNHDGTLRLFDRMLSAGFQPDL 336
Y K + A +F + + KD SWN ++ +H C N + F++M +P+L
Sbjct: 575 YAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANE--AISTFNQMKLESVRPNL 632
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VTF T+LPA S+L+ L H I+ G I + N+L+DMY K G +
Sbjct: 633 VTFVTILPAVSYLSILREAMAFHACIIRMGF--------ISSTLIGNSLIDMYAKSGQLS 684
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
++ F +M K SWN M+ GY M GQG+ AL +FS M E + D V+++ VLSAC
Sbjct: 685 YSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACR 744
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G + +GR M ++ + P++EHY C++D+LG AG +E L MP E + VW
Sbjct: 745 HAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVW 804
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL A ++H N L EIA + +LEP + +Y+++S+IY G++ + R M
Sbjct: 805 GALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDH 864
Query: 577 NVRKNPGCSWI 587
++KNPG SW+
Sbjct: 865 GLKKNPGYSWV 875
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/485 (28%), Positives = 255/485 (52%), Gaps = 20/485 (4%)
Query: 52 QEIHSYMLRT---GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
+ IH Y++R G++ + SLI+MYSKC ++K A +F+ + + ++ ++ M++G
Sbjct: 249 KSIHGYVVRRCVFGVVSN-----SLIDMYSKCGEVKLAHQIFDQMWVKDDI-SWATMMAG 302
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
+ + F+ L + M++ + +K + + + + + K++H +LG+ D
Sbjct: 303 YVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSD 362
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+ + + +V+ Y KC +++A + F L RD+V+W+A ++ Q G +AL +F+ M
Sbjct: 363 IVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQH 422
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
EG+ + ++ ++SA + + G+++H V+K S + V L+ MY + K
Sbjct: 423 EGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMY 482
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A+ +F M KD+ +WN+++ +CG+ L +F R+ +G QPD T ++L AC+
Sbjct: 483 AMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACAL 542
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF-TKMSK 407
L L G HG I+ NG+ ++ + AL+DMY KCGS+ A+ +F
Sbjct: 543 LDDLYLGICFHGNIIKNGIE--------SEMHVKVALIDMYAKCGSLCTAENLFHLNKHV 594
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KD SWN+MI GY +G EA+ F+ M ++P+ VTFV +L A S+ L + F
Sbjct: 595 KDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAF 654
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R G + + +IDM ++GQL+ + + M N+ + W +L+ +HG
Sbjct: 655 HACI-IRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGT-ISWNAMLSGYAMHG 712
Query: 528 NTDLA 532
++A
Sbjct: 713 QGEVA 717
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 183/361 (50%), Gaps = 11/361 (3%)
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
P++ +N++I + + + + M +G+ PDKYTF ++K C + E I
Sbjct: 90 PSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAI 149
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + L+ DV+IG+ LV+ Y K ++ A KVF+++P +DV WNAM++G +Q
Sbjct: 150 HQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNP 209
Query: 217 HKALEVFRRMS-KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ALE+F+RM +EG+ ++ + A+ + + + +HG VV+ GV V N+
Sbjct: 210 CEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV-FGV-VSNS 267
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LIDMY K V A +IF+ M KD SW ++M + G + L+L D M + +
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
++ + A + L G+++H Y + G+ D+ + ++ MY KCG +
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLGMT--------SDIVVATPIVSMYAKCGEL 379
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ A+ F + +D+ W+ + G EAL +F M LKPD+ ++SAC
Sbjct: 380 KKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSAC 439
Query: 456 S 456
+
Sbjct: 440 A 440
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 167/400 (41%), Gaps = 48/400 (12%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA +L G H +++ GI +LI+MY+KC + A +F+
Sbjct: 532 TMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLN 591
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++N MI+G+ N A + + FN M+ V P+ TF ++ + + E
Sbjct: 592 KHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREA 651
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
H + ++G IG++L++ Y K + + K F E+ + + WNAM++GYA
Sbjct: 652 MAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMH 711
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGR-VVHGIVVKMGYDSGVPV 272
G+ AL +F M + + + + VLSA G + GR + + K + +
Sbjct: 712 GQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEH 771
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
++D+ G C G +F D L L D+M +
Sbjct: 772 YACMVDLLG---CAG----LF------------------------DEVLCLIDKMPT--- 797
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD + +L AC MH G I ++ L K + + ++ D+Y +C
Sbjct: 798 EPDAQVWGALLGACK-----MHSNVKLGEIALHHLLKLEPRNAVHYIVLS----DIYAQC 848
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
G DA+ + M+ + GY G K+ L +
Sbjct: 849 GRWIDARRTRSNMTDHGLKKNP----GYSWVGAHKQGLSL 884
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 14 CFNFSTSSGNQTFNHPF--TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT 71
C N + S+ NQ L T + L ++ + L++ H+ ++R G I S L
Sbjct: 612 CANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGN 671
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
SLI+MY+K Q+ Y+ F+ + ++NAM+SG+ + L F+ M++ V
Sbjct: 672 SLIDMYAKSGQLSYSEKCFHEME-NKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVP 730
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D ++ ++ C + E + I + K L+ + + +V+ +E L
Sbjct: 731 VDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLC 790
Query: 191 VFEELPLR-DVVLWNAMVNG 209
+ +++P D +W A++
Sbjct: 791 LIDKMPTEPDAQVWGALLGA 810
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 290/525 (55%), Gaps = 40/525 (7%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P T+ L++ C + A+ E K+H G V I + +++ Y+KC + A ++
Sbjct: 87 PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKA-------------------------------L 220
F+E+ RD+ WN M++GYA+ G +A L
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEAL 206
Query: 221 EVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
E+FR M + E ++FT++ L+A + G+ +HG ++++G D V +AL DM
Sbjct: 207 ELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDM 266
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
YGK +GEA IF+ ++D+ SW +++ + + G + LF +L +G P+ TF
Sbjct: 267 YGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTF 326
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
S VL AC+ AA G+Q+HGY+ G + F + L+ MYTKCG++++A+
Sbjct: 327 SGVLNACADHAAEELGKQVHGYMTRIGFDPSS--------FAASTLVHMYTKCGNIKNAR 378
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF M + D+ SW +I GY +GQ EAL F + ++ +PD +TFVGVLSAC+H+G
Sbjct: 379 RVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAG 438
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G E+ ++ ++G+ T +HY C+ID+L R+G+L EA ++ MP E + +W +L
Sbjct: 439 LVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASL 498
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L R+HGN LA+ AA+ +F++EP + Y ++NIY G + V ++R M + V
Sbjct: 499 LGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVV 558
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PG SWIE+K +H F+ D SH ++K I+ L L+ R++E G
Sbjct: 559 KKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEG 603
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 227/481 (47%), Gaps = 43/481 (8%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+ AT LQLC L +G ++H++ +G + + +++MY KC + A +F
Sbjct: 88 SAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLF 147
Query: 91 NNLS----CEPNV--------------------------FTYNAMISGFYSNDFAFKGLD 120
+ ++ C N+ F++ AM SG+ +D + L+
Sbjct: 148 DEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALE 207
Query: 121 FFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F M R +K+T + + ++ K+IHG + ++GLDLD + SAL + Y
Sbjct: 208 LFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMY 267
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
KC + EA +F++ RDVV W AM++ Y + G + +F + K GIW + FT +
Sbjct: 268 GKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFS 327
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
GVL+A + G+ VHG + ++G+D + L+ MY K + A +F M
Sbjct: 328 GVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRP 387
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
D+ SW S+++ + Q G D L+ F+ +L +G QPD +TF VL AC+H + G +
Sbjct: 388 DLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYF 447
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMIL 418
I K+G D L+D+ ++ G +++A+ + KM + D W ++
Sbjct: 448 DSIK----EKHGLTHTADHY---ACLIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLG 500
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDE-VTFVGVLSACSHSGFLSQGREFLPLMESRYGV 477
G + G K A + E ++P+ T+ + + + +G E +M++R GV
Sbjct: 501 GCRIHGNLKLAKRAAEALFE--IEPENPATYTTLANIYATAGLWGGVAEVRKVMDAR-GV 557
Query: 478 V 478
V
Sbjct: 558 V 558
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 306/556 (55%), Gaps = 14/556 (2%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+ L+ C L G+ +H Y ++ G+ DSP+ I++L +MYSKC + A +F L E
Sbjct: 224 SGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELP-E 282
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ ++I + + ++ F M + G+ PD CL+ + V K
Sbjct: 283 KDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAF 342
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H ++ K +V +G+AL++ Y K + ++ A +VF L RD WN M+ GY + G
Sbjct: 343 HAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCD 402
Query: 217 HKALEVFRRMSKEGIW---MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
K LE++R M + ++ +S+ + + GR H +K D V
Sbjct: 403 VKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVA 462
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N LI MYG+ A +IF + + K D+ +WN++++ + G+ + + L+D+ML+ G
Sbjct: 463 NVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGL 522
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ T TV+ AC++L AL G +IH Y+ G DV +N AL+DMY KC
Sbjct: 523 TPNSTTLITVISACANLVALERGEKIHSYVKEMGWDY--------DVSINTALIDMYAKC 574
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G + A+ +F M + DV +WN+MI GYGM G+ K+AL++F M +KP+ VTF+ +L
Sbjct: 575 GQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAIL 634
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SAC HSG L +GR+ M +Y + P ++HY C++D+LG++G L EA ++ LAMP E +
Sbjct: 635 SACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPD 693
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
+W TLL+A +LH + ++ A++ F + + G Y+L+SN Y + K++E+ +R
Sbjct: 694 GGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREA 753
Query: 573 MRQQNVRKNPGCSWIE 588
M+ V+K G S ++
Sbjct: 754 MKNHGVQKGAGWSAVD 769
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 234/494 (47%), Gaps = 23/494 (4%)
Query: 51 GQEIHSYMLRTGII----DSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
G +H+Y +R G++ S +SL+ MY++C ++ A+ +F + E +V + A++
Sbjct: 129 GASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMR-ERDVVAWTAVV 187
Query: 107 SGFYSNDFAFKGLDFFNHMRQLG----VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
SG N GL + M +L P+ T ++ C + + + +HG K
Sbjct: 188 SGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVK 247
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
+G+ + SAL + Y KC E+A +F ELP +DVV W +++ Y G +A+E+
Sbjct: 248 VGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMEL 307
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F+ M + G+ V+ +LS L G G+ H +++K + V V NALI MYGK
Sbjct: 308 FQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGK 367
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML---SAGFQPDLVTF 339
+ V A +F ++ ++D SWN ++ + + G L L+ M + F D +
Sbjct: 368 FELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSL 427
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ + +CS L L GR H Y + + L ++ S + N L+ MY +CG A
Sbjct: 428 VSAISSCSRLVELRLGRSAHCYSIKHWLDEDSS--------VANVLIGMYGRCGKFDHAC 479
Query: 400 MVFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+F K DV +WN +I Y G A+ ++ M L P+ T + V+SAC++
Sbjct: 480 KIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANL 539
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
L +G + ++ G + T +IDM + GQL A + +M + V W
Sbjct: 540 VALERGEKIHSYVK-EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQH-DVVAWNV 597
Query: 519 LLAASRLHGNTDLA 532
+++ +HG A
Sbjct: 598 MISGYGMHGEAKQA 611
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 221/499 (44%), Gaps = 37/499 (7%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+H+ + +G+ P + L++ YS + A F+ P+ F +N++I +
Sbjct: 30 RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACP-RPDAFLWNSLIRTHHCA 88
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL----DLD 168
L+ M P +T P ++ A+ +H + GL
Sbjct: 89 SDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGS 148
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
V + S+LV Y +C + +A+K+FEE+ RDVV W A+V+G + GE L M +
Sbjct: 149 VAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVR 208
Query: 229 -EGIWMSR---FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
G +R T+ L A ++ +GR +HG VK+G V++AL MY K
Sbjct: 209 LAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCH 268
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+A +F + EKD+ SW S++ ++ G + LF M+ +G QPD V S +L
Sbjct: 269 STEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLS 328
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ + G+ H I+ D+V + NAL+ MY K + +A VF
Sbjct: 329 GLGNSGNVHGGKAFHAVIMKRNFG--------DNVLVGNALISMYGKFELVDNAGRVFRL 380
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMC---EAKLKPDEVTFVGVLSACSHSGFL 461
+ ++D SWN+MI+GY G + L+++ M + D + V +S+CS
Sbjct: 381 LHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCS----- 435
Query: 462 SQGREFLPLMESRYGVVPTIEHY--------TCVIDMLGRAGQLNEAYELALAMPNEANP 513
+ L R +I+H+ +I M GR G+ + A ++ + +
Sbjct: 436 ----RLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDV 491
Query: 514 VVWRTLLAASRLHGNTDLA 532
V W TL+++ G+++ A
Sbjct: 492 VTWNTLISSYAHLGHSNTA 510
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 184/396 (46%), Gaps = 24/396 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
L +C+ L + N+ G+ H+ +++ D+ L +LI+MY K + A VF
Sbjct: 321 VLVSCL--LSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVF 378
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC-------LIKC 143
L + + ++N MI G+ K L+ + M+ D Y F C I
Sbjct: 379 RLLH-QRDADSWNLMIVGYCKAGCDVKCLELYREMQ----FRDTYEFLCDANSLVSAISS 433
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVL 202
C ++ + + H K LD D + + L+ Y +C + A K+F L+ DVV
Sbjct: 434 CSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVT 493
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN +++ YA +G + A+ ++ +M EG+ + T+ V+SA + + G +H V
Sbjct: 494 WNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVK 553
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLR 322
+MG+D V + ALIDMY K +G A IF+ M + D+ +WN +++ + G L
Sbjct: 554 EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 613
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
LF +M +P+ VTF +L AC H L GRQ+ + L N +
Sbjct: 614 LFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPN--------LKHY 665
Query: 383 NALMDMYTKCGSMRDAQ-MVFTKMSKKDVASWNIMI 417
++D+ K G +++A+ MV + D W ++
Sbjct: 666 ACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLL 701
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 162/333 (48%), Gaps = 20/333 (6%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
E+ ++H L GL I + LV+ Y A F P D LWN+++ +
Sbjct: 27 ELLRVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHH 86
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG---YDS 268
+F AL RRM S FTV SA +G G VH V+ G D
Sbjct: 87 CASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDG 146
Query: 269 G-VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLF 324
G V V ++L+ MY + V +A+++FE M E+D+ +W ++++ + +CG DG L
Sbjct: 147 GSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECG--DGLRYLV 204
Query: 325 DRMLSAG---FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
+ + AG +P+ T + L AC L L GR +HGY V G+ D +
Sbjct: 205 EMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVG--------DSPMV 256
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL MY+KC S DA +F ++ +KDV SW +I Y G +EA+++F M E+ L
Sbjct: 257 ISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGL 316
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESR 474
+PD+V +LS +SG + G+ F ++ R
Sbjct: 317 QPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKR 349
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++++ C+ L+ G+ H Y ++ + + LI MY +C + +A +F
Sbjct: 428 VSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKL 487
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
+ +V T+N +IS + + + ++ M G+ P+ T +I C +++A+ +K
Sbjct: 488 KGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEK 547
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
IH V ++G D DV I +AL++ Y KC + A ++F+ + DVV WN M++GY GE
Sbjct: 548 IHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGE 607
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+ALE+F +M I + T +LSA G + GR + + K + +
Sbjct: 608 AKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNLKHYAC 667
Query: 276 LIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHD 318
++D+ GK + EA + + M E D W ++++ C HD
Sbjct: 668 MVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSA---CKLHD 708
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 324/615 (52%), Gaps = 20/615 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ A ++L+ G ++H+ +++ G + +LI+MY+KC ++ A VF+ + E N
Sbjct: 207 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP-ERN 265
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ A++ GF + A + L F MR G P+++T +K C +IHG
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 323
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ + G + + ++LV Y K ++ +A +VF+ +P R++ WN+M++GYA G+
Sbjct: 324 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 383
Query: 219 ALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPVMNA 275
+L VFR M + FT +L A +G + G VH + G S + A
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 443
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L+D+Y K + A+++F+ +E ++ W +++ H Q G + LF R S+G + D
Sbjct: 444 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRAD 503
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
S+V+ + A + G+Q+H Y AK + D+ + N+L+DMY KCG
Sbjct: 504 GHVLSSVVAVFADFALVEQGKQVHCYT-----AKTPAGLDVS---VANSLVDMYLKCGLT 555
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+A F +M ++V SW MI G G G G+EA+D+F M ++ DEV ++ +LSAC
Sbjct: 556 GEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSAC 615
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
SHSG + + R + + + P EHY C++D+LGRAG+L EA EL L+MP E V
Sbjct: 616 SHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGV 675
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W+TLL+A R+H + + + ++ + NYV++SNI G++ E IR MR+
Sbjct: 676 WQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRR 735
Query: 576 QNVRKNPGCSWIELKDGLHTFI-SSDRSHPEAKSIYAELHSLTARLREH----GDC-CAG 629
+ +RK GCSW E+ +H F D +HP+A I L + AR+RE GD CA
Sbjct: 736 KGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCAL 795
Query: 630 TLFDSDSTASGFEKH 644
D +S +H
Sbjct: 796 HDVDEESRVESLREH 810
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 121/247 (48%), Gaps = 12/247 (4%)
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R + +L A + G +H ++K+G+ S + N LIDMY K + A E+F+
Sbjct: 200 RRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFD 259
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH 354
M E+++ SW ++M G LRLF M +G P+ T S L AC
Sbjct: 260 GMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACG--GGTRA 317
Query: 355 GRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWN 414
G QIHG V G + DV + N+L+ MY+K DA+ VF + +++A+WN
Sbjct: 318 GVQIHGVCVRTGFEGH-------DV-VANSLVVMYSKGRWTGDARRVFDVIPSRNLATWN 369
Query: 415 IMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI GY GQG+++L +F M +PDE TF +L ACS G +G + M
Sbjct: 370 SMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAV 429
Query: 474 RYGVVPT 480
R GV P
Sbjct: 430 R-GVSPA 435
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 304/564 (53%), Gaps = 47/564 (8%)
Query: 100 FTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLEVKKIH 157
YN +IS + F L + M + VLPD +T+P +++ C + +A+ +H
Sbjct: 128 LPYNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLH 187
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL +G L + +ALV+ Y K + A KVFE + +DVV WN+M++ Y +G++
Sbjct: 188 GLATGVGGHL--FFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWV 245
Query: 218 KALEVFRRMSKE-------------GIWMS---RFTVTGVLSALI--------------- 246
+A+E+F RM E G++++ G++ ++
Sbjct: 246 QAVELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGS 305
Query: 247 ----MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+G+ + G+ +HG+ V+M D V NALI MY + K + A +F+M+ +
Sbjct: 306 NACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVV 365
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
+WN+++ + RL M+ AG QP+ VT T+L C+ +A L HG+++H +I
Sbjct: 366 TWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHI 425
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
V NG + N+L+DMY+K G + AQ VF M +D+ S+ MI GYGM
Sbjct: 426 VKNGFKGYR--------LLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGM 477
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G+G AL +F M ++ +KPD ++ V VLSACSHSG +++G + M S YG+ P +E
Sbjct: 478 QGKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQME 537
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY+C++D+ R+G L +A + + ++W L+ A GN + E AA+R+ ++
Sbjct: 538 HYSCMVDLYARSGLLEKAEGMLNESSSPPTSMMWAALVGACHDRGNIIIGERAARRLLEM 597
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+ + G+YVL++N+Y A G ++E+ +R MR V K PG +W++L++G F+ DRS
Sbjct: 598 KTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWVDLRNGFAPFLVGDRS 657
Query: 603 HPEAKSIYAELHSLTARLREHGDC 626
+P A IY L L+ ++R G+C
Sbjct: 658 NPLAPEIYEVLDELSEQMRNIGNC 681
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 36/355 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ CA +L G+ +H + L TG+ +L++MY+K + A VF ++ + +
Sbjct: 169 LRACAEAGDLALGRAVHLHGLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMA-QKD 227
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQL------------------------------ 128
V ++N+MIS + + + ++ F MR
Sbjct: 228 VVSWNSMISAYVAVGQWVQAVELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIR 287
Query: 129 -----GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
G D T C V + K+IHGL ++ D + +AL+ Y +C+
Sbjct: 288 EMVSDGAAVDFVTLVIGSNACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCK 347
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
M+ A +F+ L VV WN M+ +A E +A + M G+ + TV +L+
Sbjct: 348 HMDSACLLFKMLACPGVVTWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLA 407
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
+ ++G+ +H +VK G+ + N+LIDMY K + A +F+ M+++D+ S
Sbjct: 408 LCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMIS 467
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+ ++ + G LRLFD+M+ +G +PD ++ TVL ACSH + G ++
Sbjct: 468 YTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKL 522
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 2/257 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + C+ L+ G+EIH +R +LI MY++C M A +F L
Sbjct: 300 TLVIGSNACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKML 359
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+C P V T+N MI+ F +D A + + M GV P+ T L+ C V +
Sbjct: 360 AC-PGVVTWNTMIASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHG 418
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+++H + K G + ++L++ Y K + A VF+ + RD++ + M+ GY
Sbjct: 419 QELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQ 478
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G+ AL +F +M GI ++ VLSA G G ++ + G +
Sbjct: 479 GKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEH 538
Query: 273 MNALIDMYGKGKCVGEA 289
+ ++D+Y + + +A
Sbjct: 539 YSCMVDLYARSGLLEKA 555
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L LCA NLQ GQE+HS++++ G L SLI+MYSK + A VF+ +
Sbjct: 401 TVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTM 460
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ +Y MI+G+ L F+ M G+ PD + ++ C V E
Sbjct: 461 D-DRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACSHSGLVTEG 519
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAMVNGYA 211
+K+ + G+ + S +V+ Y + +E+A + E ++W A+V
Sbjct: 520 EKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNESSSPPTSMMWAALVGACH 579
Query: 212 QIGEFHKALEVFRRM 226
G RR+
Sbjct: 580 DRGNIIIGERAARRL 594
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 318/603 (52%), Gaps = 17/603 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
++T + ++ C +++G ++H Y++R+G +D P SL++MY+ M+ A +F
Sbjct: 149 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADN-DMERAEELF 207
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMA 149
+ + CE +V +++ MI G+ A L F M + D T ++K C +
Sbjct: 208 DEM-CERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 266
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + +HG+V GLD D+++G+++++ Y KC E A K F E+P R+ V WN++++G
Sbjct: 267 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 326
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ + +AL +F M K G T+ +L + + +H IV++ GY+
Sbjct: 327 LVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN 386
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V+N+LID Y K + A ++F+ ++ KD SW++++ CG D + LF M
Sbjct: 387 EFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQ 446
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
A +P+ VT ++L A S A L + HG + GLA +V + A++DMY
Sbjct: 447 AQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAA--------EVAVGTAILDMY 498
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCG + ++ F ++ +K++ SW MI GM+G ++AL + S M LKP+ VT +
Sbjct: 499 AKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTL 558
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
VLSACSH G + +G F M +GV P +EHY+C++DML RAG+LN A L MP
Sbjct: 559 SVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPE 618
Query: 510 EAN--PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
+W LL+A R GN+ L AA RV +LEP Y L S++Y A G + +
Sbjct: 619 RMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAA 678
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA---ELHS-LTARLREH 623
+R ++ + VR G S + ++D F++ D SHP A I+ +LH + R
Sbjct: 679 RMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNE 738
Query: 624 GDC 626
DC
Sbjct: 739 SDC 741
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 166/555 (29%), Positives = 273/555 (49%), Gaps = 24/555 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
T T + S+ ++ G+ IH+ +L+ G + S+++ Y K + ALFV
Sbjct: 47 LTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFV 106
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+++ +V ++N MI G S + KGL +F R + P+ T I C + A
Sbjct: 107 FDSMRSRDSV-SWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGA 165
Query: 150 VLEVKKIHGLVFKLGLDLDV-YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E K+HG + + G LD+ + ++L++ Y ME A ++F+E+ RDV+ W+ M+
Sbjct: 166 MEEGLKMHGYIIRSGF-LDIPSVQNSLLSMYADND-MERAEELFDEMCERDVISWSVMIG 223
Query: 209 GYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q GE AL++F M S I + T+ VL A G GR VHG+V+ G D
Sbjct: 224 GYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLD 283
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ V N++IDMY K A + F M ++ SWNSI++ + H L LF M
Sbjct: 284 YDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSM 343
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
AGF+ D VT +L +C + + IH ++ G N F+ N+L+D
Sbjct: 344 GKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNE--------FVINSLID 395
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
Y+KC + A +F ++ KD SW+ MI G+ G+ EA+ +F M +A+ KP+ VT
Sbjct: 396 AYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVT 455
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+ +L A S S L + + + + R G+ + T ++DM + G++ + + +
Sbjct: 456 ILSLLEAFSVSADLKRSK-WAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQI 514
Query: 508 PNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA---GGK 562
P E N V W ++AA ++G LA ++ ++ L+P N V ++ A GG
Sbjct: 515 P-EKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKP----NVVTTLSVLSACSHGGL 569
Query: 563 YEEVLDIRHTMRQQN 577
EE L M Q +
Sbjct: 570 VEEGLSFFENMVQDH 584
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 173/339 (51%), Gaps = 14/339 (4%)
Query: 122 FNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYL 180
++ M++ G L D ++K C + V K IH + K G D G+++++ Y+
Sbjct: 37 YHQMKKAGAQLTDPTLVHSILKACSS-LPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYM 95
Query: 181 KCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
K ++ AL VF+ + RD V WN M++G+ G K L FR+ + T+
Sbjct: 96 KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL 155
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+ A +G + G +HG +++ G+ V N+L+ MY + A E+F+ M E+D
Sbjct: 156 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEMCERD 214
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
+ SW+ ++ + Q G L+LF M S A + D +T +VL AC++ + GR +H
Sbjct: 215 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 274
Query: 360 GYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMIL 418
G ++ C+ +D D+F+ N+++DMY+KC A F +M ++ SWN +I
Sbjct: 275 GVVI---------CRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIIS 325
Query: 419 GYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
G + EAL +F M +A + DEVT V +L +C +
Sbjct: 326 GLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY 364
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/480 (38%), Positives = 281/480 (58%), Gaps = 36/480 (7%)
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ LV+ Y++ + EA KVF+++P R+VV W AM+ GY Q G +A +F RM +
Sbjct: 29 NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPERN-- 86
Query: 233 MSRFTVTGVLSALIMMG-FFKNGRV--VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
V+S +M+G ++GRV + M V N + + +G+ + EA
Sbjct: 87 --------VVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLI-EA 137
Query: 290 LEIFEMMEEKDIFSWNSIMT-------------VHEQCGNHDGTLRLFDRMLSAGFQPDL 336
EIF+ M ++++ +W S+++ ++E+ G L LF M G +P
Sbjct: 138 REIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSF 197
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+ +VL C LA+L HGRQ+H +V + DID +++++ L+ MY KCG +
Sbjct: 198 PSVISVLSVCGSLASLDHGRQVHSQLVRSQF-------DID-IYVSSVLITMYIKCGDLV 249
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ VF + S KD+ WN +I GY G G++AL++F M + + PDE+TF+GVLSACS
Sbjct: 250 TAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACS 309
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
++G + +G E M+S+Y V P EHY C++D+LGRAG+LNEA L MP EA+ +VW
Sbjct: 310 YTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVW 369
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
LL A R H N DLAEIAA+++ QLEP + G Y+L+SN+Y + ++++V+++R TMR +
Sbjct: 370 GALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAK 429
Query: 577 NVRKNPGCSWIELKDGLHTFI-SSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSD 635
N+RK+PGCSWIE+ +H F SHPE + I +L L A LRE G C G+ D
Sbjct: 430 NLRKSPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHD 489
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 111/221 (50%), Gaps = 8/221 (3%)
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC--CCDVMAV 150
+S E + T++ MI + F + L F+ M++ GV P +FP +I C +A
Sbjct: 156 ISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRP---SFPSVISVLSVCGSLAS 212
Query: 151 LE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
L+ +++H + + D+D+Y+ S L+ Y+KC + A +VF+ +D+V+WN+++ G
Sbjct: 213 LDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAG 272
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
YAQ G KALEVF M I T GVLSA G K G + + K D
Sbjct: 273 YAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDP 332
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
++D+ G+ + EA+ + E M E D W +++
Sbjct: 333 KTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 93/180 (51%), Gaps = 5/180 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFV 89
+ + I+ L +C +L G+++HS ++R+ D + ++S LI MY KC + A V
Sbjct: 196 SFPSVISVLSVCGSLASLDHGRQVHSQLVRSQF-DIDIYVSSVLITMYIKCGDLVTAKRV 254
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ S + ++ +N++I+G+ + F K L+ F+ M + PD+ TF ++ C
Sbjct: 255 FDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGK 313
Query: 150 VLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
V E +I + K +D + +V+ + + EA+ + E +P+ D ++W A++
Sbjct: 314 VKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/590 (32%), Positives = 327/590 (55%), Gaps = 16/590 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+AT L +CA + G+ +H ++ + + +L++MYSKC + A +F
Sbjct: 289 VATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFK 348
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG--VLPDKYTFPCLIKCCCDVMA 149
L+ NV ++N M+ GF + K D M G + D+ T + C +
Sbjct: 349 -LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESV 407
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +K++H K + + + +A V +Y KC + A +VF + + V WNA++
Sbjct: 408 LPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIG 467
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
GY+Q + +L+ + +M G+ FTV +LSA + K G+ VHG++++ +
Sbjct: 468 GYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLER 527
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V +L+ +Y + A +F+ ME+K + SWN+++ + Q G + L LF +M+
Sbjct: 528 DSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMV 587
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G QP ++ +V ACS L +L GR+ HGY + C D+ F+ +++DM
Sbjct: 588 LYGVQPCEISMMSVFGACSLLPSLRLGREAHGYAL--------KCLLEDNAFIACSVIDM 639
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y K GS+ ++ VF + ++ VASWN M++GYG+ G+ KEA+ +F M PDE+TF
Sbjct: 640 YAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTF 699
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL-AM 507
+GVL+AC+HSG + +G +L M++ +G+ PT++HY CVIDML RAG+L+EA ++A M
Sbjct: 700 LGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEM 759
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
E +W LL++ R+H N ++ E A ++F EP NYVL+SN+Y GK++EV
Sbjct: 760 SEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVR 819
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS---HPEAKSIYAELH 614
+R M++ ++RK+ GCSWIEL + +F++ + S E KS+++ L
Sbjct: 820 KVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLE 869
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 244/493 (49%), Gaps = 26/493 (5%)
Query: 40 QLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
Q + ++Q G++IH + + + + + T +I MYS C + VF+ L + N
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALR-KKN 147
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+F +NA+IS + N+ L+ F M + G+LPD +TFPC++K C V V +H
Sbjct: 148 LFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVH 207
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GLV K L DV++ +ALV+ Y + +AL+VF+ +P R++V WN+M+ ++ G
Sbjct: 208 GLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267
Query: 218 KALEVFRRMSKEGIWMS----RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
+ + +M ++ ++ T+ VL G+ VHG+ +K+ D V V
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVN 327
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-- 331
NAL+DMY K C+ +A IF++ K++ SWN+++ G+ T L +ML+ G
Sbjct: 328 NALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGD 387
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+ D VT +P C + L + +++H Y + N + NA + Y K
Sbjct: 388 LRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNE-------LVANAFVASYAK 440
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ A VF + K V SWN +I GY + +LD + M + L PD T +
Sbjct: 441 CGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSL 500
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEH----YTCVIDMLGRAGQLNEAYELALAM 507
LSACS L G+E L+ + +E Y ++ + G+L+ A+ L AM
Sbjct: 501 LSACSQIKSLKLGKEVHGLI-----IRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAM 555
Query: 508 PNEANPVVWRTLL 520
++ V W T++
Sbjct: 556 EDKT-LVSWNTMV 567
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 311/562 (55%), Gaps = 19/562 (3%)
Query: 70 ITS--LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
ITS LI+MY KC + A VF+++ E NV +++A++SG N L F+ M +
Sbjct: 413 ITSNYLIDMYCKCREPLMAYKVFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR 471
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
G+ P+++TF +K C + A+ + +IHG K+G ++ V +G++LV+ Y KC + E
Sbjct: 472 QGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE 531
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI--WMSRFTVTGVLSAL 245
A KVF + R ++ WNAM+ G+ G KAL+ F M + I FT+T +L A
Sbjct: 532 AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 591
Query: 246 IMMGFFKNGRVVHGIVVKMGY--DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
G G+ +HG +V+ G+ S + +L+D+Y K + A + F+ ++EK + S
Sbjct: 592 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 651
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W+S++ + Q G + LF R+ Q D S+++ + A L G+Q+ V
Sbjct: 652 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 711
Query: 364 --VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYG 421
+GL + + N+++DMY KCG + +A+ F +M KDV SW ++I GYG
Sbjct: 712 KLPSGL----------ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 761
Query: 422 MDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTI 481
G GK+++ +F M ++PDEV ++ VLSACSHSG + +G E + +G+ P +
Sbjct: 762 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 821
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
EHY CV+D+LGRAG+L EA L MP + N +W+TLL+ R+HG+ +L + + + +
Sbjct: 822 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 881
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
++ + NYV+MSN+Y G + E + R + ++K G SW+E++ +H F S +
Sbjct: 882 IDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGED 941
Query: 602 SHPEAKSIYAELHSLTARLREH 623
SHP I L RLRE
Sbjct: 942 SHPLTPVIQETLKEAERRLREE 963
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 207/406 (50%), Gaps = 16/406 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS + + FT +T +L+ C L+KG +IH + L+ G SL++M
Sbjct: 466 FSEMGRQGIYPNEFTFST---NLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 522
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV--LPDK 134
YSKC ++ A VF + + ++ ++NAMI+GF + K LD F M++ + PD+
Sbjct: 523 YSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 581
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVF 192
+T L+K C + K+IHG + + G I +LV+ Y+KC ++ A K F
Sbjct: 582 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 641
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++ + ++ W++++ GYAQ GEF +A+ +F+R+ + + F ++ ++ +
Sbjct: 642 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 701
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ + + VK+ V+N+++DMY K V EA + F M+ KD+ SW ++T +
Sbjct: 702 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 761
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ G ++R+F ML +PD V + VL ACSH + G ++ + L +G
Sbjct: 762 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL----LETHGI 817
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++ ++D+ + G +++A+ + M K +V W ++
Sbjct: 818 KPRVEHY---ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 860
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
L++ + L++ Y KC+ A KVF+ +P R+VV W+A+++G+ G+ +L +F M
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
++GI+ + FT + L A ++ + G +HG +K+G++ V V N+L+DMY K +
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ--PDLVTFSTVLP 344
EA ++F + ++ + SWN+++ G L F M A + PD T +++L
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLK 589
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
ACS + G+QIHG++V +G S + +L+D+Y KCG + A+ F +
Sbjct: 590 ACSSTGMIYAGKQIHGFLVRSGFHCPSSAT------ITGSLVDLYVKCGYLFSARKAFDQ 643
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+ +K + SW+ +ILGY +G+ EA+ +F + E + D ++ + L QG
Sbjct: 644 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 703
Query: 465 REFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
++ L ++ G+ ++ V+DM + G ++EA E A + + W ++
Sbjct: 704 KQMQALAVKLPSGLETSV--LNSVVDMYLKCGLVDEA-EKCFAEMQLKDVISWTVVITGY 760
Query: 524 RLHG 527
HG
Sbjct: 761 GKHG 764
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 306/584 (52%), Gaps = 16/584 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSP---LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
++++ G+ +H+ +++T +DSP LINMYSK + A V L+ NV ++
Sbjct: 20 SSMRLGRVVHARIVKT--LDSPPPPFLANYLINMYSKLDHPESARLVLR-LTPARNVVSW 76
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK 162
++ISG N L F MR+ GV+P+ +TFPC K + + K+IH L K
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 163 LGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEV 222
G LDV++G + + Y K + ++A K+F+E+P R++ WNA ++ G +A+E
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 196
Query: 223 FRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
F + + T L+A G +HG+V++ G+D+ V V N LID YGK
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGK 256
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
K + + IF M K+ SW S++ + Q + L+ R + S+V
Sbjct: 257 CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSV 316
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L AC+ +A L GR IH + V + + +F+ +AL+DMY KCG + D++ F
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERT--------IFVGSALVDMYGKCGCIEDSEQAF 368
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL--KPDEVTFVGVLSACSHSGF 460
+M +K++ + N +I GY GQ AL +F M P+ +TFV +LSACS +G
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + M S YG+ P EHY+C++DMLGRAG + AYE MP + VW L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
A R+HG L +AA+ +F+L+P GN+VL+SN + A G++ E +R ++ ++K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
G SWI +K+ +H F + DRSH K I L L + G
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAG 592
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 143/286 (50%), Gaps = 10/286 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYA 86
HP ++ C A L C+ +L G ++H +LR+G D+ +S+ LI+ Y KC Q++ +
Sbjct: 206 HPNSITFC-AFLNACSDWLHLNLGMQLHGLVLRSGF-DTDVSVCNGLIDFYGKCKQIRSS 263
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F + + N ++ ++++ + N K + R+ V + ++ C
Sbjct: 264 EIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 147 VMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNA 205
MA LE+ + IH K ++ +++GSALV+ Y KC +E++ + F+E+P +++V N+
Sbjct: 323 -MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSR--FTVTGVLSALIMMGFFKNG-RVVHGIVV 262
++ GYA G+ AL +F M+ G + T +LSA G +NG ++ +
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSI 307
G + G + ++DM G+ V A E + M + I W ++
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>gi|297607519|ref|NP_001060096.2| Os07g0578800 [Oryza sativa Japonica Group]
gi|255677918|dbj|BAF22010.2| Os07g0578800 [Oryza sativa Japonica Group]
Length = 967
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 282/503 (56%), Gaps = 34/503 (6%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK-------------- 181
+ P +K C + +H L + G D + +AL+N +K
Sbjct: 368 SLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPS 427
Query: 182 ------CQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
E KVF+E+ RD V WN ++ G A+ +AL + R M ++G
Sbjct: 428 GEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDT 487
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
FT++ VL K G VVHG +K G+D+ V V ++LIDMY + ++++F+
Sbjct: 488 FTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDS 547
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
+ D WNS++ + Q G+ + L +F RML AG +P VTFS+++PA +L+ L G
Sbjct: 548 FSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLG 607
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
+Q+H Y++ + D++F++++L+DMY KCG++ A+ VF + D+ SW
Sbjct: 608 KQLHAYLI--------RARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTA 659
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
MI+GY + G EA +F M +KP+ +TF+ VL+ACSH+G + G ++ M ++Y
Sbjct: 660 MIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQY 719
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
G VP++EH + D LGRAG L+EAY M + VW TLL A R+H NT LAE
Sbjct: 720 GFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEV 779
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++F+LEP G++V++SN+Y A G++ E +R +MR + ++K P CSWIE+K+ LH
Sbjct: 780 AKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHV 839
Query: 596 FISSDRSHP------EAKSIYAE 612
FI+ D+SHP +A ++Y+E
Sbjct: 840 FIAHDKSHPWYDRIIDALNVYSE 862
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 189/411 (45%), Gaps = 38/411 (9%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL- 87
P L +C A L LC +L H+ +R+G + +L+N+ K +
Sbjct: 370 PAALKSC-AGLGLCTLAASL------HALAIRSGSFADRFTANALLNLCIKLPGFHHPFG 422
Query: 88 -------------------FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
VF+ + E + ++N +I G + + L M +
Sbjct: 423 TNGPSGEGGLESAAYESMRKVFDEM-LERDAVSWNTLILGCAEHKRHQEALSMVREMWRD 481
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
G +PD +T ++ + + +HG K G D DV++GS+L++ Y C M+ +
Sbjct: 482 GFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYS 541
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
+KVF+ D VLWN+M+ GYAQ G +AL +FRRM + G+ T + ++ A +
Sbjct: 542 MKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNL 601
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIM 308
+ G+ +H +++ ++ + + ++LIDMY K V A +F ++ DI SW +++
Sbjct: 602 SLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMI 661
Query: 309 TVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLA 368
+ G LF+RM +P+ +TF VL ACSH A L+ +G+ N ++
Sbjct: 662 MGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSH-AGLVD----NGWKYFNSMS 716
Query: 369 KN-GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS-WNIMI 417
G ++ AL D + G + +A ++M K +S W+ ++
Sbjct: 717 NQYGFVPSLEHC---AALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 764
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 146/294 (49%), Gaps = 9/294 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL+T + CA ++++G +H Y ++ G + +SLI+MY+ C QM Y++ V
Sbjct: 488 FTLSTVLPIFAECA---DIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKV 544
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F++ S + + +N+M++G+ N + L F M Q GV P TF LI ++
Sbjct: 545 FDSFS-DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSL 603
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H + + + +++I S+L++ Y KC ++ A +VF + D+V W AM+ G
Sbjct: 604 LRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMG 663
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
YA G +A +F RM + + T VL+A G NG + + + + G+
Sbjct: 664 YALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVP 723
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGNHDGTL 321
+ AL D G+ + EA M+ K S W++++ C H T+
Sbjct: 724 SLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRA---CRVHKNTV 774
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 306/576 (53%), Gaps = 9/576 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
+ C +L G+ IH + RT S L+ MY C VF+ + + N
Sbjct: 94 FEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMK-N 152
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++ +IS + N K + F+ M+ G+ P+ + L++ C + K+IH
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V + L+ ++ + +A+ N Y++C ++E A VF+ + ++ V W ++ GY Q +
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F RM+ EG+ + F + VL + + GR +H +VK+G +S V V L+D
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVD 332
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
Y K + A F + E + SW+++++ Q G + +++F + S G +
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+++V AC+ A L G Q HG + GL + ++ +A++ MY+KCG + A
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGL--------VSYLYGESAMVTMYSKCGRLDYA 444
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+ F + + D +W +I GY G EAL F M ++P+ VTF+ VL+ACSHS
Sbjct: 445 RRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G +++ +++L M YGV PTI+HY C+ID RAG L EA EL MP E + + W++
Sbjct: 505 GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKS 564
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL H + L +IAA+ +F+L+PG Y+L+ N+Y A GK+EE +R M ++ +
Sbjct: 565 LLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAEREL 624
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
+K CSWI +K +H F+ DR HP+ ++IY++L
Sbjct: 625 KKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLE 660
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 197/388 (50%), Gaps = 9/388 (2%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
A ++ LQ C + L+ G++IHS+++R + + T++ NMY +C ++ A VF+
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDG 248
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + N T+ ++ G+ L+ F M GV D++ F ++K CC +
Sbjct: 249 MDAQ-NAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++IH + KLG + +V +G+ LV+ Y+KC +E A + F + + V W+A+++G++Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +++F + EG+ ++ F T V A G HG +K G S +
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+A++ MY K + A FE ++E D +W +I++ + GN L F RM S G
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+P+ VTF VL ACSH + +Q G ++++ K D + + ++D Y++
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLG-----SMSRDYGVKPTIDHY--DCMIDTYSRA 540
Query: 393 GSMRDAQMVFTKMS-KKDVASWNIMILG 419
G +++A + +M + D SW ++ G
Sbjct: 541 GLLQEALELINRMPFEPDAMSWKSLLGG 568
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 191/410 (46%), Gaps = 10/410 (2%)
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
DF M V +++ CL + C + ++ + + IH + + + I + L+ Y
Sbjct: 73 DFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMY 132
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
C + KVF+E+ ++++V W +++ YA+ GE KA+ +F M GI +
Sbjct: 133 CDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYM 192
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
+L + + F + G+ +H V++ ++ + V A+ +MY + + A +F+ M+ +
Sbjct: 193 SLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQ 252
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
+ +W +M + Q + L LF RM G + D FS VL C L GRQIH
Sbjct: 253 NAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIH 312
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
+IV G +V + L+D Y KCG + A F ++S+ + SW+ +I G
Sbjct: 313 SHIVKLGAES--------EVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISG 364
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
+ G+ ++ + +F+ + + + + V AC+ L+ G + R G+V
Sbjct: 365 FSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKR-GLVS 423
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
+ + ++ M + G+L+ A A +E + V W +++ HGN
Sbjct: 424 YLYGESAMVTMYSKCGRLDYARR-AFESIDEPDAVAWTAIISGYAYHGNA 472
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 301/577 (52%), Gaps = 17/577 (2%)
Query: 51 GQEIHSYMLR-TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G+ H+ LR SP L+N+YSK + A P V +Y A ISG
Sbjct: 34 GRAAHARALRLIAPALSPFICAHLVNLYSKL-DLPAAAAAALASDPHPTVVSYTAFISGA 92
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLG-LDL 167
+ L F M +LG+ P+ +TFP K + +IH L + G L +
Sbjct: 93 AQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPV 152
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D ++ A ++ Y K ++ A +F E+P R+VV WNA++ G + +E + +
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G + + +A + G HG VVK G++ V V+N+++D YGK +C G
Sbjct: 213 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 272
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A +F+ M ++ SW S++ + Q G + + +G +P S+ L C+
Sbjct: 273 KARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCA 332
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L L GR +H V SC D + +F+ +AL+DMY KCG + DA+ +F + +
Sbjct: 333 GLLGLHLGRALHAVAV-------RSCIDAN-IFVASALVDMYGKCGCVEDAEQIFYETPQ 384
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGRE 466
+++ +WN MI GY G + AL +F M + + P+ +T V V+++CS G G E
Sbjct: 385 RNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYE 444
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M R+G+ P EHY CV+D+LGRAG +AYE+ MP + VW LL A ++H
Sbjct: 445 LFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMH 504
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
G T+L IAA+++F+L+P GN+VL+SN++ + G++ E DIR M+ ++K+PGCSW
Sbjct: 505 GKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSW 564
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ K+ +H F + D H +Y E+ +L ++LR+
Sbjct: 565 VTWKNVVHVFRAKDTKH----EMYNEIQALLSKLRKQ 597
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P ++ C A CA L G++ H ++++ G + S+++ Y KC A
Sbjct: 218 PNVVSAC-AFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARA 276
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + N ++ +M++ + N + + R+ G P + + C ++
Sbjct: 277 VFDGMGVR-NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLL 335
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + +H + + +D ++++ SALV+ Y KC +E+A ++F E P R++V WNAM+
Sbjct: 336 GLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIG 395
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRF-TVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GYA IG+ AL VF M + G + T+ V+++ G K+G + + + G
Sbjct: 396 GYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGI 455
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
+ ++D+ G+ +A E+ + M + S W +++
Sbjct: 456 EPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL 498
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/573 (31%), Positives = 314/573 (54%), Gaps = 10/573 (1%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
++H ++++ G + + SL++ Y K + A +F +++ + NV T+NA+++G+
Sbjct: 160 QVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV-TFNALLTGYSKE 218
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
F ++ F M+ LG P ++TF ++ + + +++H V K +V++
Sbjct: 219 GFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVA 278
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+AL++ Y K + EA K+F E+P D + +N ++ A G ++LE+FR +
Sbjct: 279 NALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFD 338
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+F +LS + GR +H + S V V N+L+DMY K GEA I
Sbjct: 339 RRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRI 398
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F + + W ++++ + Q G H+ L+LF M A D T++++L AC++LA+L
Sbjct: 399 FADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASL 458
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVAS 412
G+Q+H I+ +G N VF +AL+DMY KCGS+++A +F +M ++ S
Sbjct: 459 TLGKQLHSRIIRSGCLSN--------VFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVS 510
Query: 413 WNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLME 472
WN +I Y +G G AL F M + L+P+ V+F+ +L ACSH G + +G ++ M
Sbjct: 511 WNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMT 570
Query: 473 SRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
Y + P EHY ++DML R+G+ +EA +L MP E + ++W ++L + R+H N +LA
Sbjct: 571 QVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELA 630
Query: 533 EIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
AA ++F ++ YV MSNIY A G+++ V ++ +R++ +RK P SW+E+K
Sbjct: 631 IKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWVEIKQ 690
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F ++D SHP+ K I +L L ++ E G
Sbjct: 691 KTHVFSANDTSHPQTKEITRKLDELEKQMEEQG 723
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 251/504 (49%), Gaps = 23/504 (4%)
Query: 30 FTLATCIASLQLCAHQTNLQKG-----QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
F TC + Q+ QT+LQ+G +++ M +I S ++I Y K +
Sbjct: 38 FDPNTCRFNFQV---QTHLQRGDLGAARKLFDEMPHKNVI----STNTMIMGYLKSGNLS 90
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A +F+++ + +V T+ +I G+ ++ + + F M + G++PD T L+
Sbjct: 91 TARSLFDSM-VQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGF 149
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ +V EV ++HG V K+G D + + ++L+++Y K + + A +F+ + +D V +N
Sbjct: 150 TEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFN 209
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
A++ GY++ G H A+ +F +M G S FT VL+A I M + G+ VH VVK
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKC 269
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
+ V V NAL+D Y K + EA ++F M E D S+N ++T G + +L LF
Sbjct: 270 NFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELF 329
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ F F+T+L ++ L GRQIH +V I +V + N+
Sbjct: 330 RELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDA--------ISEVLVGNS 381
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+DMY KC +A +F ++ + W +I GY G ++ L +F M AK+ D
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGAD 441
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
T+ +L AC++ L+ G++ + R G + + + ++DM + G + EA ++
Sbjct: 442 SATYASILRACANLASLTLGKQLHSRI-IRSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 505 LAMPNEANPVVWRTLLAASRLHGN 528
MP N V W L++A +G+
Sbjct: 501 QEMPVR-NSVSWNALISAYAQNGD 523
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
V ++K G+D N + + + +G A ++F+ M K++ S N+++ + + GN
Sbjct: 29 VDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGN 88
Query: 317 HDGTLRLFDRMLSA-------------------------------GFQPDLVTFSTVLPA 345
LFD M+ G PD +T +T+L
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSG 148
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN-NALMDMYTKCGSMRDAQMVFTK 404
+ ++ Q+HG++V G D M N+L+D Y K S+ A +F
Sbjct: 149 FTEFESVNEVAQVHGHVVKVGY---------DSTLMVCNSLLDSYCKTRSLGLACHLFKH 199
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M++KD ++N ++ GY +G +A+++F M + +P E TF VL+A + G
Sbjct: 200 MAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFG 259
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
++ + + V + ++D + ++ EA +L MP E + + + L+
Sbjct: 260 QQVHSFV-VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCA 317
Query: 525 LHGNTD 530
+G +
Sbjct: 318 WNGRVE 323
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 335/615 (54%), Gaps = 25/615 (4%)
Query: 14 CFN-FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS 72
CF+ F SSG Q F + L+ C N+ G +IH L+ G + S
Sbjct: 139 CFSLFMLSSGLQPDYRTFP-----SVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAAS 190
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
LI++Y + + A +F+ + ++ ++NAMISG+ + A + L + +R +
Sbjct: 191 LIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGYCQSGNAKEALTLSDGLRAM---- 245
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T L+ C + IH K GL+ ++++ + L++ Y + +++ KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ + +RD++ WN+++ Y + +A+ +F+ M I T+ + S L +G +
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365
Query: 253 NGRVVHGIVVKMGYD-SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVH 311
R V G ++ G+ + + NA++ MY K V A +F + KD+ SWN+I++ +
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425
Query: 312 EQCGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
Q G + +++ M G + T+ +VLPACS AL G ++HG ++ NGL
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
DVF+ +L DMY KCG + DA +F ++ + + WN +I +G G G++A
Sbjct: 486 --------DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKA 537
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ +F M + +KPD +TFV +LSACSHSG + +G +M++ YG+ P+++HY C++D
Sbjct: 538 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVD 597
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ GRAGQL A +MP + + +W LL+A R+HGN DL +IA++ +F++EP H G
Sbjct: 598 LYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY 657
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
+VL+SN+Y + GK+E V +IR + +RK PG S +E+ + + F + +++HP + +
Sbjct: 658 HVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEM 717
Query: 610 YAELHSLTARLREHG 624
Y EL +L +L+ G
Sbjct: 718 YRELTALHEKLKMVG 732
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/514 (29%), Positives = 264/514 (51%), Gaps = 22/514 (4%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
TNLQ + +H+ ++ + I + L+N+Y + A + F+++ +V+ +N M
Sbjct: 65 TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIH-NRDVYAWNLM 123
Query: 106 ISGFYSNDFAFKGLDFFN-HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
ISG+ ++ + + F+ M G+ PD TFP ++K C +V + KIH L K G
Sbjct: 124 ISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT---DGNKIHCLALKFG 180
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DVY+ ++L++ Y + + A +F+E+P RD+ WNAM++GY Q G +AL +
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSD 240
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+ M TV +LSA G F G +H +K G +S + V N LID+Y +
Sbjct: 241 GLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG 296
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
+ + ++F+ M +D+ SWNSI+ +E + LF M + QPD +T ++
Sbjct: 297 SLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLAS 356
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
S L + R + G+ + G ++D+ + NA++ MY K G + A+ VF
Sbjct: 357 ILSQLGEIRACRSVQGFTLRKGWF-------LEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE--AKLKPDEVTFVGVLSACSHSGFLS 462
+ KDV SWN +I GY +G EA++M++ M E ++ ++ T+V VL ACS +G L
Sbjct: 410 LPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALR 469
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
QG + + + G+ + T + DM G+ G+L++A L +P N V W TL+A
Sbjct: 470 QGMKLHGRL-LKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIAC 527
Query: 523 SRLHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMS 554
HG+ + A + + + ++P H L+S
Sbjct: 528 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 561
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 271/456 (59%), Gaps = 9/456 (1%)
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
+IG LV++Y++ ++AL++F+ELP +D+V WN++++G+++ + L + RM E
Sbjct: 74 FIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFE 133
Query: 230 -GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G+ + TV V+SA +G G+ +HGI VK G V V+N+LI++YGK C+
Sbjct: 134 MGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEA 193
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +FE M + + SWNS++ VH G + + F M AG D T ++L AC +
Sbjct: 194 ACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACEN 253
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L +HGYI+ GL N + + AL+D+Y K G++ D+ VF M
Sbjct: 254 LGVRKLAEAVHGYILNGGLDGN--------LAIATALLDLYAKLGTLSDSCKVFGGMINP 305
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
D +W M+ Y M G+G+EA++ F M + PD VTF +LSACSHSG + +G+ +
Sbjct: 306 DAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYF 365
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
+M YGV +EHY+C++D+LGR+G LN+AY+L +MP E N VW L+ A R+ GN
Sbjct: 366 KIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGN 425
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
+L + A+R+F L+P NY+ +SN+Y A G++ + +R M+++ + +NPGCS+IE
Sbjct: 426 IELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLIRNPGCSYIE 485
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ +H F+ D+SHP+ + IY +L L + RE G
Sbjct: 486 HGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVG 521
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 226/488 (46%), Gaps = 35/488 (7%)
Query: 3 SKISRINPFSSCFNFSTSSGNQ---TFNHPFTLATCIASLQLCAHQT--NLQKGQEIHSY 57
SK+ ++ F S S +Q TF H F+ + S + A T ++ + +H
Sbjct: 5 SKLLILHKFISSIRLYNSFASQLSPTF-HAFSNVDSLVSALITAISTCSSISYCRALHCR 63
Query: 58 MLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFK 117
++++ + L++ Y + K AL +F+ L + ++ ++N++ISGF
Sbjct: 64 VIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELP-DKDLVSWNSLISGFSRRADLGI 122
Query: 118 GLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
L MR ++G+ P++ T ++ C V + K IHG+ K G+ L+V + ++L+
Sbjct: 123 CLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLI 182
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
N Y KC +E A +FE + ++ +V WN+MV + +G K + F M + GI +
Sbjct: 183 NLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQA 242
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMM 296
TV +L A +G K VHG ++ G D + + AL+D+Y K + ++ ++F M
Sbjct: 243 TVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGM 302
Query: 297 EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGR 356
D +W ++++ + G + F+ M+ G PD VTF+ +L ACSH + G+
Sbjct: 303 INPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGK 362
Query: 357 Q----IHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVA 411
++ + V ++ SC ++D+ + G + DA + M + +
Sbjct: 363 NYFKIMYEFYGVELRVEHYSC-----------MVDLLGRSGHLNDAYKLIKSMPMEPNSG 411
Query: 412 SWNIMILGYGMDGQ---GKEALD-MFSCMCEAKLKP-DEVTFVGVLSACSHSGFLSQGRE 466
W +I + G GKE + +FS L P D ++ + + S +G +
Sbjct: 412 VWGALIGACRVRGNIELGKEVAERLFS------LDPSDSRNYITLSNMYSAAGQWRDASK 465
Query: 467 FLPLMESR 474
LM+ R
Sbjct: 466 VRALMKER 473
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/577 (32%), Positives = 301/577 (52%), Gaps = 17/577 (2%)
Query: 51 GQEIHSYMLR-TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
G+ H+ LR SP L+N+YSK + A P V +Y A ISG
Sbjct: 34 GRAAHARALRLIAPALSPFICAHLVNLYSKL-DLPAAAAAALASDPHPTVVSYTAFISGA 92
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLG-LDL 167
+ L F M +LG+ P+ +TFP K + +IH L + G L +
Sbjct: 93 AQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPV 152
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D ++ A ++ Y K ++ A +F E+P R+VV WNA++ G + +E + +
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G + + +A + G HG VVK G++ V V+N+++D YGK +C G
Sbjct: 213 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 272
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A +F+ M ++ SW S++ + Q G + + +G +P S+ L C+
Sbjct: 273 KARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCA 332
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L L GR +H V SC D + +F+ +AL+DMY KCG + DA+ +F + +
Sbjct: 333 GLLGLHLGRALHAVAVR-------SCIDAN-IFVASALVDMYGKCGCVEDAEQIFYETPQ 384
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGRE 466
+++ +WN MI GY G + AL +F M + + P+ +T V V+++CS G G E
Sbjct: 385 RNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYE 444
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M R+G+ P EHY CV+D+LGRAG +AYE+ MP + VW LL A ++H
Sbjct: 445 LFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMH 504
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
G T+L IAA+++F+L+P GN+VL+SN++ + G++ E DIR M+ ++K+PGCSW
Sbjct: 505 GKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSW 564
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
+ K+ +H F + D H +Y E+ +L ++LR+
Sbjct: 565 VTWKNVVHVFRAKDTKH----EMYNEIQALLSKLRKQ 597
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P ++ C A CA L G++ H ++++ G + S+++ Y KC A
Sbjct: 218 PNVVSAC-AFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARA 276
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + N ++ +M++ + N + + R+ G P + + C ++
Sbjct: 277 VFDGMGVR-NSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLL 335
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + +H + + +D ++++ SALV+ Y KC +E+A ++F E P R++V WNAM+
Sbjct: 336 GLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIG 395
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRF-TVTGVLSALIMMGFFKNG-RVVHGIVVKMGY 266
GYA IG+ AL VF M + G + T+ V+++ G K+G + + + G
Sbjct: 396 GYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGI 455
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
+ ++D+ G+ +A E+ + M + S W +++
Sbjct: 456 EPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALL 498
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 311/553 (56%), Gaps = 11/553 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ LQ C ++ + G IH+ L+ + S ++N Y KC ++ Y L +F+ +
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP- 277
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVK 154
E NV +++A+I+GF + + L F M G ++P+++T + C ++
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+I+ + +LG +V++ +A + ++ + + EAL+VFE +D V WNAM+ GY Q+
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
F + +RRM+ E + FT +L+ L + F+ G VHG +VK GY + + V N
Sbjct: 398 YFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L DMY K + + + + F+ M D+ SW + QCG L++ M + G +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRL 516
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ T +T L +C++LA++ G++ HG + G D+D V ++NAL+DMY KCG
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLG-------TDVD-VCVDNALLDMYAKCGC 568
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M A +VF M ++ V SW MI+G+ +GQ KEAL +F M + + +P+ +TF+ VL+A
Sbjct: 569 MTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CS GF+ + ++ M + +G+ P+ +HY C++++LGRAG + EA +L L MP + +
Sbjct: 629 CSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSL 688
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
VW+TLL A +HG+ + + AA+ L+ Y+L+SN++ G ++ V +R M
Sbjct: 689 VWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELME 748
Query: 575 QQNVRKNPGCSWI 587
++V+K PG SW+
Sbjct: 749 TRDVKKVPGSSWM 761
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 290/559 (51%), Gaps = 72/559 (12%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P + LI C + K +H K L ++ + L++ Y KC ++ A KV
Sbjct: 12 PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKV 71
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKA-------------------------------L 220
F LP+++ WN +++ Y++ G F++A L
Sbjct: 72 FHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESL 131
Query: 221 EVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
VF+ M K+ + FT+ ++ + +G + R VHG + +G +S + + NALID
Sbjct: 132 NVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALID 191
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC------------------------ 314
YGK + IF M E+D+ SW S++ + Q
Sbjct: 192 AYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTAL 251
Query: 315 -------GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
G D L LF++M G P TF++VL AC+ LA + G++IHG+I+
Sbjct: 252 IAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHII---- 307
Query: 368 AKNGSCKD-IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+C D ++F+ NAL+DMY KCG MR A +F M +KD+ SWN +I G+ +G G
Sbjct: 308 --RSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHG 365
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+E+L +F M EA ++P+ VTF+G+LSAC H+G +S+G L ME YGV P +HY
Sbjct: 366 EESLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAI 425
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
+ID+LGR +L EA L P ++ V +W LL A R+HGN DLA AA+ +FQLEPG
Sbjct: 426 MIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPG 485
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
+ YV++ NIY A +++E +R M ++ +RK CSWIE+++ H F++ +RSH +
Sbjct: 486 NAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQ 545
Query: 606 AKSIYAELHSLTARLREHG 624
+Y +H+L ++ + G
Sbjct: 546 INEVYEVIHNLVDQMYDSG 564
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 225/498 (45%), Gaps = 95/498 (19%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE----- 96
C +L+ G+ +HS+ ++T +I + LI+ YSKC ++ A VF+ L +
Sbjct: 24 CITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSW 83
Query: 97 -------------------------PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL--G 129
PN+ +YN++ISG + F + L+ F M +
Sbjct: 84 NIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSN 143
Query: 130 VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEAL 189
VL D++T L+ C + A ++++HG +GL+ ++ IG+AL++ Y KC + +
Sbjct: 144 VLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISF 203
Query: 190 KVFEELPLRDVVLWNAMVNGYAQI-------------------------------GEFHK 218
+F +P RDVV W +MV YAQ G +
Sbjct: 204 SIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDE 263
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK---MGYDSGVPVMNA 275
AL +F +M +EGI S FT VLSA + G+ +HG +++ + Y + ++NA
Sbjct: 264 ALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNA 323
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LIDMY K + A +F+ M EKDI SWNS++T Q G+ + +L +F+RM+ A +P+
Sbjct: 324 LIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPN 383
Query: 336 LVTFSTVLPACSHLAALMHGRQI---------------HGYIVVNGLAKNG--------- 371
VTF +L AC H + G +I H I+++ L +N
Sbjct: 384 HVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLI 443
Query: 372 --SCKDIDDVFMNNALMDMYTKCGSM---RDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
+ K D V M AL+ G+M R A V ++ + A + ++ Y +
Sbjct: 444 KRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRW 503
Query: 427 KEALDMFSCMCEAKLKPD 444
EA + M E L+ +
Sbjct: 504 DEARQVRRLMMERGLRKE 521
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 12/318 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S TS++ Y++ +++ A ++F+ + E N ++ A+I+GF N + L F MR+
Sbjct: 215 VSWTSMVAAYAQASRLEDAHWLFSQMQ-EKNTVSWTALIAGFAQNGRGDEALHLFEQMRE 273
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFK---LGLDLDVYIGSALVNTYLKCQF 184
G+ P +TF ++ C D+ + K+IHG + + + +++I +AL++ Y KC
Sbjct: 274 EGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQ 333
Query: 185 MEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSA 244
M A +F+ + +D+V WN+++ G+AQ G ++L VF RM + I + T G+LSA
Sbjct: 334 MRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSA 393
Query: 245 LIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE--KDI 301
G G R++ + G +ID+ G+ + EA+ + + + +
Sbjct: 394 CCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHV 453
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRM--LSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
W +++ GN D R + + L G V + A S RQ+
Sbjct: 454 GMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWD---EARQVR 510
Query: 360 GYIVVNGLAKNGSCKDID 377
++ GL K +C I+
Sbjct: 511 RLMMERGLRKEAACSWIE 528
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYA 86
FT A+ +++ CA + +G+EIH +++R+ ID +I +LI+MY KC QM+ A
Sbjct: 281 FTFASVLSA---CADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSA 337
Query: 87 LFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCD 146
+F + E ++ ++N++I+GF N + L F M + + P+ TF L+ CC
Sbjct: 338 TTLFKGMH-EKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLSACCH 396
Query: 147 VMAVLEVKKI 156
V E +I
Sbjct: 397 TGLVSEGLRI 406
>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
Length = 697
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 182/592 (30%), Positives = 314/592 (53%), Gaps = 10/592 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C +N+ G+ +H+Y +T ++ S ++L++MY + ++ + VF +
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFR- 160
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAVLEVKKI 156
N T+ A I+G ++GL +F+ M + L D + F +K C D+ V ++I
Sbjct: 161 NSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREI 220
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H V G +++ ++L Y +C M++ L++FE + RDVVLW +++ Y +IG+
Sbjct: 221 HTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQE 280
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
KA+ F M + + T +A + G +HG V +G + V N++
Sbjct: 281 EKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSM 340
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY + A +F+ M +DI SW++I+ + Q + + F M AG QP
Sbjct: 341 MKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTD 400
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+++L +A L GRQ+H + GL +N + + +AL++MY+KCGS+
Sbjct: 401 FALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIR--------SALINMYSKCGSII 452
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A VF + + D+ S MI GY G+ +EA+D+F + +PD+VTF+ VL+ACS
Sbjct: 453 EASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACS 512
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG L G ++ LM+ Y + P EHY C++D+L RAG+LN+A ++ MP + + VVW
Sbjct: 513 HSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVW 572
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL A + G+ + AAQR+ +L+P V ++NI+ + G ++E ++R M+ +
Sbjct: 573 TTLLRACKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSK 632
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCA 628
V K PG S I +KD + F S SHP+++ + + L + H CA
Sbjct: 633 GVIKEPGWSSILIKDQVSAFASGSLSHPQSEDVCSILELVVIDSEAHRYDCA 684
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 213/431 (49%), Gaps = 25/431 (5%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPC 139
+++ A VF+ + ++ ++ A++ G+ + + L F+ MR LGV D Y
Sbjct: 43 KLRVARQVFDKMP-RRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+K C + + +H K L V++GSAL++ Y++ ++++ +VF E+P R+
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRN 161
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSK-EGIWMSRFTVTGVLSALIMMGFFKNGRVVH 258
V W A + G G ++ L F +MS+ + + F L A + K GR +H
Sbjct: 162 SVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIH 221
Query: 259 GIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD 318
V+ G+ + + V N+L MY + + + L +FE M E+D+ W S++T + + G +
Sbjct: 222 THVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEE 281
Query: 319 GTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+ F M ++ P+ TF++ AC+ L+ L+ G Q+HG + GL D
Sbjct: 282 KAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLG--------DS 333
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ ++N++M MY+ C + A ++F M +D+ SW+ +I GY G+E FS M +
Sbjct: 334 LSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQ 393
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGRE------FLPLMESRYGVVPTIEHYTCVIDMLG 492
A +P + +LS L QGR+ +L L ++ PTI + +I+M
Sbjct: 394 AGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQN-----PTIR--SALINMYS 446
Query: 493 RAGQLNEAYEL 503
+ G + EA ++
Sbjct: 447 KCGSIIEASKV 457
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 18/339 (5%)
Query: 8 INPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSP 67
+N F N S QTF F CA + L G+++H + G+ DS
Sbjct: 284 VNTFLLMRNSQVSPNEQTFASTFAA---------CASLSRLVWGEQLHGNVFSLGLGDSL 334
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S++ MYS C ++ A +F + C ++ +++ +I G+ F + +F+ MRQ
Sbjct: 335 SVSNSMMKMYSTCAKLDSASVLFQGMRCR-DIISWSTIIGGYSQAAFGEECFKYFSWMRQ 393
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
G P + L+ +MAVLE +++H L LGL+ + I SAL+N Y KC +
Sbjct: 394 AGPQPTDFALASLLS-VSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSII 452
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
EA KVFEE D+V AM+NGYA+ G+ +A+++F + K T VL+A
Sbjct: 453 EASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACS 512
Query: 247 MMGFFKNGRVVHGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSW 304
G G ++ + ++D+ + + +A + I EM +KD W
Sbjct: 513 HSGQLDLGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVW 572
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
+++ ++ G+ + R R+L + D +F+T++
Sbjct: 573 TTLLRACKEKGDVERGRRAAQRIL----ELDPTSFTTLV 607
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV--G 450
G +R A+ VF KM ++D+ SW ++ GY + +EAL +FS M L T+V
Sbjct: 42 GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
L AC S ++ G E + ++ ++ + ++DM R G+++++ + MP
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTF-LLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFR 160
Query: 511 ANPVVWRTLL 520
N V W +
Sbjct: 161 -NSVTWTAFI 169
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 312/589 (52%), Gaps = 23/589 (3%)
Query: 39 LQLCAHQTNLQKG----QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS 94
L L +H N K ++IH ++T + P I LI + S ++ + L
Sbjct: 6 LHLFSHSLNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILL 65
Query: 95 CEPNVFTY-----NAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ + NA+I N ++F N M +G+ PD +T P ++K +
Sbjct: 66 THSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQG 125
Query: 150 VLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ E ++IH K G+ +VY+ + L+ Y C + + KVF+E P RD+V W ++
Sbjct: 126 IREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQ 185
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV---VKMG 265
+ + G + +A+E F M + T+ VLSA +G G+ VH + + M
Sbjct: 186 AFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMK 245
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
D V V NAL+DMY K + A ++F+ M K++ +WN++++ G + L F
Sbjct: 246 AD--VFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFR 303
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
M G +PD VT VL +C++L L G+ +H Y+ N + + D F+ NAL
Sbjct: 304 MMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHI--------LADKFVGNAL 355
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCGS+ +A VF M ++DV S+ MI G + G+ A +FS M ++P+E
Sbjct: 356 LDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNE 415
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+G+L ACSH G +++G+++ M +Y + P EHY C+ID+LGRAG + EA E+
Sbjct: 416 VTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIH 475
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
M + LL A R+HGN D+ E Q++ +L+P G Y+LM+N+Y + ++++
Sbjct: 476 KMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKD 535
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
L IR TM+ + +RK PGCS IE+ +H F D+SHP +K I A ++
Sbjct: 536 ALKIRKTMKNKKMRKTPGCSLIEVDGVVHEFRKGDKSHPRSKVIIANIN 584
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 6/289 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T + L C++ +L GQ++HSY+ + + + + +L++MY KC + A VF+
Sbjct: 214 TLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDE 273
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV T+NAMISG + LD F M+ GV PD+ T ++ C + + VLE
Sbjct: 274 MPVK-NVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCAN-LGVLE 331
Query: 153 VKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K +H + + + D ++G+AL++ Y KC ++EA +VFE + RDV + AM+ G A
Sbjct: 332 IGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLA 391
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGV 270
GE + A +VF M + GI + T G+L A G G + + K
Sbjct: 392 LHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQA 451
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHD 318
+ID+ G+ V EA EI ME D+F+ +++ GN D
Sbjct: 452 EHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVD 500
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 12/192 (6%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L CA+ L+ G+ +H+YM R I+ +L++MY+KC + A VF +
Sbjct: 315 VTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFES 374
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ +V++Y AMI G + A F+ M ++G+ P++ TF L+ C V E
Sbjct: 375 MK-RRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAE 433
Query: 153 VKKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM-- 206
KK + +KL + Y +++ + ++EA ++ ++ +R DV A+
Sbjct: 434 GKKYFFQMSDKYKLRPQAEHY--GCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLG 491
Query: 207 ---VNGYAQIGE 215
++G IGE
Sbjct: 492 ACRIHGNVDIGE 503
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 187/668 (27%), Positives = 333/668 (49%), Gaps = 75/668 (11%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
T+ G + ++ PF+ + ++ C + + ++H+ + + G S++ MY
Sbjct: 137 TNDGGKNYD-PFSFTSV---MKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYV 192
Query: 79 KCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL---------- 128
KC + A VF ++ P++F +N+MI G+ +K L FN M +
Sbjct: 193 KCGDVDLAETVFFDIE-RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251
Query: 129 ---------------------GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G P+ T+ ++ C + +H + ++ L
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL 311
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+ G+ L++ Y KC ++ A +VF+ L D + WN+++ G G AL +F +M
Sbjct: 312 DLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMR 371
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK----- 282
+ + + F + +L + G ++HG +K G S PV NA+I MY K
Sbjct: 372 RSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTD 431
Query: 283 --------------------------GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+G+A F+MM E++I +WNS+++ + Q G
Sbjct: 432 KADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGF 491
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ L+L+ M S G QPD +TF+T + AC+ LA + G Q+ + GL+ N
Sbjct: 492 SEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLN------ 545
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
V + N+++ MY++CG +++A+ F + KD+ SWN M+ + +G G + +D F M
Sbjct: 546 --VSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDM 603
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+ + KP+ +++V VLS CSH G +++G+ + M +G+ PT EH++C++D+LGRAG
Sbjct: 604 LKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGL 663
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L +A +L MP + N VW LL + R+H + LAE AA+++ +L+ YVL+SN+
Sbjct: 664 LEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNM 723
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y G+ + V D+R M+ + +R + GCSWIE+ + +H F + SHP+ K +Y +L +
Sbjct: 724 YSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEM 783
Query: 617 TARLREHG 624
+ + G
Sbjct: 784 MKMIEDTG 791
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/571 (23%), Positives = 238/571 (41%), Gaps = 110/571 (19%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI---- 106
+++H+ ++ +G+ S + +L++MYS C A VF + N+FT+N MI
Sbjct: 27 ARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQE-THHRNIFTWNTMIRALV 85
Query: 107 -----------------------------SGFYSNDFAFKGLDFFNHM----RQLGVLPD 133
SG+ N F + + F+ M G D
Sbjct: 86 SSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
++F ++K C + ++H LV KLG ++ I +++V Y+KC ++ A VF
Sbjct: 146 PFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFF 205
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK------------------------- 228
++ + WN+M+ GY+Q+ +KAL++F RM +
Sbjct: 206 DIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAM 265
Query: 229 ------EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK 282
+G + T VLSA K G +H +++M + + N LIDMY K
Sbjct: 266 FVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAK 325
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
C+ A +F+ + E D SWNS++T G + L LF++M + D T+
Sbjct: 326 CGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTI 385
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L CS G +HGY + +G+ + + NA++ MY KCG A +VF
Sbjct: 386 LGVCSGPDYASTGELLHGYTIKSGMGSSAP--------VGNAIITMYAKCGDTDKADLVF 437
Query: 403 T-------------------------------KMSKKDVASWNIMILGYGMDGQGKEALD 431
M ++++ +WN M+ Y +G +E L
Sbjct: 438 RLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
++ M ++PD +TF + AC+ + G + + +++G+ + ++ M
Sbjct: 498 LYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVT-HATKFGLSLNVSVANSIVTMY 556
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
R G + EA ++ ++ + + W +LAA
Sbjct: 557 SRCGLIKEAKNTFDSI-DDKDLISWNAMLAA 586
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 211/481 (43%), Gaps = 63/481 (13%)
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR--DVVLWNAMVNGYAQIGEFH 217
VF+ +++ + ++ + M +A K+F+E+P+R D V W M++GY+Q G
Sbjct: 65 VFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHS 124
Query: 218 KALEVFRRMSKE----GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
++ E F M ++ G F+ T V+ A +G + +H +V K+G+ +
Sbjct: 125 RSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQ 184
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR------- 326
N+++ MY K V A +F +E +F WNS++ + Q L++F+R
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 327 ------------------------MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
M + GF P+ +T+ +VL AC+ + L G +H I
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+ + D+ N L+DMY KCG + A+ VF + + D SWN +I G
Sbjct: 305 L--------RMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVH 356
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G G++AL +F+ M + + DE +L CS + S G E L + G+ +
Sbjct: 357 FGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-ELLHGYTIKSGMGSSAP 415
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+I M + G ++A + MP N + W ++ A G+ A+ F +
Sbjct: 416 VGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDIG----KARGYFDM 470
Query: 543 EP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
P + + M + YV G EE L + +MR V+ + WI TF +S R
Sbjct: 471 MPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPD----WI-------TFTTSIR 519
Query: 602 S 602
+
Sbjct: 520 A 520
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 306/562 (54%), Gaps = 34/562 (6%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S LI+ Y K + A F+ + E NV ++ AM+ G+ + F M +
Sbjct: 79 VSWNGLISGYVKNRMVSEARKAFDTMP-ERNVVSWTAMVRGYVQEGLVSEAETLFWQMPE 137
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
V+ LI+ V + + GL F + DV + +++ Y + + E
Sbjct: 138 KNVVSWTVMLGGLIQ-------VRRIDEARGL-FDIMPVKDVVARTNMISGYCQEGRLAE 189
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+E+P R+V+ W M++GY Q G+ A ++F M ++ V ++
Sbjct: 190 ARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK---------NEVSWTAML 240
Query: 248 MGFFKNGRVVHGIVVKMGYDS----GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
MG+ + GR+ + +D+ V NA+I +G+ V +A ++F+ + EKD +
Sbjct: 241 MGYTQGGRIEEASEL---FDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
W++++ V+E+ G L LF M G Q + + +VL C+ LA+L HGRQ+H +V
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+ DVF+ + L+ MY KCG + A+ +F + S KD+ WN +I GY
Sbjct: 358 KSQFD--------SDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQH 409
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +EAL +F MC + + D VTFVGVLSACS++G + +G E M+S+Y V P EH
Sbjct: 410 GLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEH 469
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
Y C++D+LGRAG +N+A +L MP EA+ ++W LL A R H N +LAE+AA+++ QLE
Sbjct: 470 YACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLE 529
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS-DRS 602
P + G Y+L+SNIY + G++ +V ++R MR + V K+PGCSWIE++ +H F
Sbjct: 530 PKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTK 589
Query: 603 HPEAKSIYAELHSLTARLREHG 624
HPE SI L L LRE G
Sbjct: 590 HPELSSIMKMLEKLDGMLREAG 611
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 198/446 (44%), Gaps = 52/446 (11%)
Query: 160 VFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ---IGEF 216
VF D + +++V Y + EA +F+++P R+ V WN +++GY + + E
Sbjct: 38 VFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLISGYVKNRMVSEA 97
Query: 217 HKALEVF------------RRMSKEGIWMSRFTV------TGVLSALIMMGFFKNGRVV- 257
KA + R +EG+ T+ V+S +M+G R +
Sbjct: 98 RKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRID 157
Query: 258 --HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
G+ M V N +I Y + + EA E+F+ M +++ SW ++++ + Q G
Sbjct: 158 EARGLFDIMPVKDVVARTN-MISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNG 216
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
D +LF+ M + + V+++ +L + + ++ + V + +C
Sbjct: 217 QVDVARKLFEVMP----EKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVV---AC-- 267
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
NA++ + + G + A+ VF ++ +KD +W+ MI Y G EAL++F+
Sbjct: 268 -------NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFAL 320
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRA 494
M ++ + + + VLS C+ L GR+ L++S++ + + +I M +
Sbjct: 321 MQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFD--SDVFVASVLITMYVKC 378
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL-EPGHCGNYVLM 553
G L +A ++ + + V+W +++ HG L E A Q ++ G + V
Sbjct: 379 GDLVKARQI-FDRFSPKDIVMWNSIITGYAQHG---LVEEALQVFHEMCSSGMATDGVTF 434
Query: 554 SNIYVA---GGKYEEVLDIRHTMRQQ 576
+ A GK +E L+I +M+ +
Sbjct: 435 VGVLSACSYTGKVKEGLEIFESMKSK 460
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 125/296 (42%), Gaps = 59/296 (19%)
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
+ Y + +E A +VF+E+P + +V WN+MV GY Q +A +F +M + R
Sbjct: 23 IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE------R 76
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
TV+ N LI Y K + V EA + F+
Sbjct: 77 NTVS---------------------------------WNGLISGYVKNRMVSEARKAFDT 103
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
M E+++ SW +++ + Q G LF +M + ++V+++ +L + +
Sbjct: 104 MPERNVVSWTAMVRGYVQEGLVSEAETLFWQMP----EKNVVSWTVMLGGLIQVRRIDEA 159
Query: 356 RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNI 415
R + + V DV ++ Y + G + +A+ +F +M +++V SW
Sbjct: 160 RGLFDIMPVK------------DVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTT 207
Query: 416 MILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
MI GY +GQ A +F M E +EV++ +L + G + + E M
Sbjct: 208 MISGYVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAM 259
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 60/339 (17%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N+ I Y + + A +F+ M +K I SWNS++ + Q LFD+M
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------ 73
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYI---VVNGLAKNGSCKDIDDVFMNNALMDMYT 390
P+ T S I GY+ +V+ K +V A++ Y
Sbjct: 74 PERNTVS-------------WNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYV 120
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+ G + +A+ +F +M +K+V SW +M+ G + EA +F M D V
Sbjct: 121 QEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMP----VKDVVARTN 176
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
++S G L++ RE M R + +T +I + GQ++ A +L MP E
Sbjct: 177 MISGYCQEGRLAEARELFDEMPRR-----NVISWTTMISGYVQNGQVDVARKLFEVMP-E 230
Query: 511 ANPVVWRTLL----AASRLHGNTDL----------------------AEIA-AQRVF-QL 542
N V W +L R+ ++L E+A A++VF Q+
Sbjct: 231 KNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQI 290
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
G + M +Y G E L++ M+++ V+ N
Sbjct: 291 REKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSN 329
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+ + Y + G + A+ VF +M K + SWN M+ GY + + +EA +F M E
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
+ V++ G++S + +S+ R+ M R + +T ++ + G ++EA
Sbjct: 77 -NTVSWNGLISGYVKNRMVSEARKAFDTMPER-----NVVSWTAMVRGYVQEGLVSEAET 130
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQR-VFQLEPGHCGNYVLMSNI---YV 558
L MP E N V W +L G + I R +F + P + V +N+ Y
Sbjct: 131 LFWQMP-EKNVVSWTVMLG-----GLIQVRRIDEARGLFDIMP--VKDVVARTNMISGYC 182
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDG 592
G+ E ++ M ++NV SW + G
Sbjct: 183 QEGRLAEARELFDEMPRRNV-----ISWTTMISG 211
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 87/176 (49%), Gaps = 3/176 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ I+ L +CA +L G+++H+ ++++ + LI MY KC + A +F+
Sbjct: 332 SLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + ++ +N++I+G+ + + L F+ M G+ D TF ++ C V E
Sbjct: 392 SPK-DIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEG 450
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+I + K ++ + +V+ + + +A+ + +++P+ D ++W A++
Sbjct: 451 LEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 315/570 (55%), Gaps = 28/570 (4%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S L++ Y K + A VF+ + E NV ++ +M+ G+ + F M +
Sbjct: 79 ISWNGLVSGYVKNGMISEARKVFDKMP-ERNVVSWTSMVRGYVQEGLIDEAELLFWRMPE 137
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
V+ ++ ++ + V E +++ F + DV + ++ + E
Sbjct: 138 KNVV----SWTVMLGGLIEDGRVDEARRL----FDMIPVKDVVASTNMIGGLCSEGRLSE 189
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+E+P R+VV W +M++GYA + A ++F M + + T T +L
Sbjct: 190 AREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDK----NEVTWTAMLK---- 241
Query: 248 MGFFKNGRVVHGI-VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
G+ ++GR+ + K V N +I +G VG+A +F+ M+EKD +W++
Sbjct: 242 -GYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSA 300
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
++ ++E+ G L LF M G +P+ + ++L C LA+L HGRQ+H +V +
Sbjct: 301 LIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
D+D +++++ L+ MY KCG + + VF + S KD+ WN +I GY G G
Sbjct: 361 F-------DLD-IYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFG 412
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
++AL++F M + PDE+TF+GVLSAC ++G + +G E M+S+Y V EHY C
Sbjct: 413 EKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYAC 472
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+LGRAG+LNEA L MP EA+ +VW LL+A R H N DLAEIAA+++ QLEP
Sbjct: 473 MVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSS 532
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFI-SSDRSHPE 605
G Y+L+SN+Y + ++++V ++R TMR +NV K+PGCSWIE+ + +H F SHPE
Sbjct: 533 AGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPE 592
Query: 606 AKSIYAELHSLTARLREHGDCCAGTLFDSD 635
+ I +L L A LRE G C G+ D
Sbjct: 593 HEMIMKKLEKLGASLREAGYCPDGSFVMHD 622
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 195/438 (44%), Gaps = 62/438 (14%)
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI- 231
+A+V Y + EA K+F+++P R+ + WN +V+GY + G +A +VF +M + +
Sbjct: 51 NAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVV 110
Query: 232 -WMS-------------------RFTVTGVLSALIMM-GFFKNGRVVHGIVVKMGYDSGV 270
W S R V+S +M+ G ++GRV + +D +
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEA---RRLFDM-I 166
Query: 271 PVMN--ALIDMYGKGKC----VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
PV + A +M G G C + EA EIF+ M ++++ +W S+++ + D +LF
Sbjct: 167 PVKDVVASTNMIG-GLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLF 225
Query: 325 DRMLSAGFQPDL--VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+ M PD VT++ +L + + ++ + V +A +C
Sbjct: 226 EVM------PDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVA---AC--------- 267
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N ++ + G + A+ VF +M +KD +W+ +I Y G EAL +FS M ++
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 443 PDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
P+ + + +LS C L GR+ L+ S + + I + +I M + G L
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDL--DIYVSSVLITMYIKCGDLVTGK 385
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA-- 559
+ + + V+W +++A HG + A +F G + + + A
Sbjct: 386 RV-FDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS--SGAAPDEITFIGVLSACG 442
Query: 560 -GGKYEEVLDIRHTMRQQ 576
GK +E L+I +M+ +
Sbjct: 443 YTGKVKEGLEIFESMKSK 460
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 150/349 (42%), Gaps = 40/349 (11%)
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ + + ++ A +F++L + V WNA+V GY +A ++F +M +
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNT---- 78
Query: 236 FTVTGVLSALIMMGFFKNGRVVHGIVV--KMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ G++S G+ KNG + V KM + V +++ Y + + EA +F
Sbjct: 79 ISWNGLVS-----GYVKNGMISEARKVFDKMP-ERNVVSWTSMVRGYVQEGLIDEAELLF 132
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
M EK++ SW ++ + G D RLFD M+ D+V + ++ L
Sbjct: 133 WRMPEKNVVSWTVMLGGLIEDGRVDEARRLFD-MIPV---KDVVASTNMIGGLCSEGRLS 188
Query: 354 HGRQIHGYI----------VVNGLAKNGSCKDIDDVF---------MNNALMDMYTKCGS 394
R+I + +++G A N +F A++ YT+ G
Sbjct: 189 EAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGR 248
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ +A +F M K VA+ N MI+G+G++G+ +A +F M E D+ T+ ++
Sbjct: 249 INEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEK----DDGTWSALIKI 304
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
GF + LM+ R GV P ++ + G L+ ++
Sbjct: 305 YERKGFELEALALFSLMQ-REGVRPNFPSIISILSVCGSLASLDHGRQV 352
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 141/353 (39%), Gaps = 72/353 (20%)
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ S + I + + + A IF+ ++ K + SWN+I+ + +LFD
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN--- 382
+M P+ T S +G +V+G KNG + VF
Sbjct: 72 KM------PERNTIS------------WNG-------LVSGYVKNGMISEARKVFDKMPE 106
Query: 383 ------NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
+++ Y + G + +A+++F +M +K+V SW +M+ G DG+ EA +F M
Sbjct: 107 RNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFD-M 165
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR---------------------- 474
K D V ++ G LS+ RE M R
Sbjct: 166 IPVK---DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVAR 222
Query: 475 --YGVVPTIEH--YTCVIDMLGRAGQLNEAYELALAMPNEANPVVW-RTLLAASRLHGNT 529
+ V+P +T ++ R+G++NEA EL AMP PV ++ L+G
Sbjct: 223 KLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMP--VKPVAACNGMIMGFGLNGEV 280
Query: 530 DLAEIAAQRVF-QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
A+ VF Q++ G + + IY G E L + M+++ VR N
Sbjct: 281 G----KARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPN 329
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 334 bits (856), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/475 (35%), Positives = 277/475 (58%), Gaps = 8/475 (1%)
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ +V+++H + G ++ + + L+ Y++ +E+A ++F+ + R W+ +V G
Sbjct: 66 LFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGG 125
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
YA++G F +FR + + G + ++ V+ A + K GR++H I +K G D G
Sbjct: 126 YAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYG 185
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V L+DMY + K V +A +IF M ++D+ +W ++ + G +L FDRM +
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRN 245
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G PD V TV+ AC+ L A+ + IH YI NG+ +D V + A++DMY
Sbjct: 246 QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYI-------NGTGYSLD-VILGTAMIDMY 297
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ A+ +F +M ++V +W+ MI YG GQG++AL++F M + + P+ +TFV
Sbjct: 298 AKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFV 357
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+L ACSH+G + +G+ F M YGV P ++HYTC++D+LGRAG+L+EA E+ MP
Sbjct: 358 SLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPV 417
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
E + V+W LL A R+H + DLAE A+ + +L+ G+YVL+SNIY GK+E++
Sbjct: 418 EKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKT 477
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
R M + +RK PG +WIE+ + L+ F D++HP + IY L L +L G
Sbjct: 478 RDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAG 532
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 202/457 (44%), Gaps = 52/457 (11%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL + +++H+ + G + L+ MY + ++ A +F+ +S + + ++++ ++
Sbjct: 65 NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMS-KRHPYSWSVIV 123
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
G+ F F + + G D Y+ P +I+ C D+ + + IH + K GLD
Sbjct: 124 GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLD 183
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
++ + LV+ Y +C+ +E+A ++F ++ RD+ W M+ A+ G ++L F RM
Sbjct: 184 YGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRM 243
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+GI + + V+ A +G + +H + GY V + A+IDMY K V
Sbjct: 244 RNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSV 303
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A IF+ M+ +++ +W++++ + G + L LF ML +G P+ +TF ++L AC
Sbjct: 304 ESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYAC 363
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
SH + G++ SM D V
Sbjct: 364 SHAGLIEEGQRFF---------------------------------SSMWDEYGV----- 385
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS---- 462
DV + M+ G G+ EAL+M M ++ DEV + +L AC L
Sbjct: 386 TPDVKHYTCMVDLLGRAGRLDEALEMIEGM---PVEKDEVLWGALLGACRIHRHLDLAER 442
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
R L L + G HY + ++ AG+ +
Sbjct: 443 VARSLLKLQSQKPG------HYVLLSNIYANAGKWED 473
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 3/272 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ C +L+ G+ IH L+ G+ +L++MY++C ++ A +F + + +
Sbjct: 158 IRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM-WKRD 216
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ T+ MI + + L FF+ MR G++PDK ++ C + A+ + K IH
Sbjct: 217 LATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHA 276
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G LDV +G+A+++ Y KC +E A +F+ + +R+V+ W+AM+ Y G+ K
Sbjct: 277 YINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK 336
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALI 277
ALE+F M + GI +R T +L A G + G R + + G V ++
Sbjct: 337 ALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMV 396
Query: 278 DMYGKGKCVGEALEIFEMME-EKDIFSWNSIM 308
D+ G+ + EALE+ E M EKD W +++
Sbjct: 397 DLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
CA + K + IH+Y+ TG + T++I+MY+KC ++ A ++F+ + NV T
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVR-NVIT 320
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
++AMI+ + + K L+ F M + G+LP++ TF L+ C + E ++ ++
Sbjct: 321 WSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMW 380
Query: 162 -KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYAQIGEFHKA 219
+ G+ DV + +V+ + ++EAL++ E +P+ +D VLW A++ G +I H+
Sbjct: 381 DEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL-GACRI---HRH 436
Query: 220 LEVFRRMSK 228
L++ R+++
Sbjct: 437 LDLAERVAR 445
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 312/577 (54%), Gaps = 13/577 (2%)
Query: 49 QKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISG 108
+ G+ IH + G L ++++ MY K +++ A VF+ + E + +N MISG
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISG 194
Query: 109 FYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ N+ + + F + + D T ++ ++ + +IH L K G
Sbjct: 195 YRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYS 254
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
Y+ + ++ Y KC ++ +F E D+V +NAM++GY GE +L +F+ +
Sbjct: 255 HDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
G +R + ++S + + G +HG +K + S V AL +Y K +
Sbjct: 315 LSG---ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIE 371
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
A ++F+ EK + SWN++++ + Q G + + LF M + F P+ VT + +L AC+
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L AL G+ +H + + ++++ AL+ MY KCGS+ +A+ +F M+K
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESS--------IYVSTALIGMYAKCGSIAEARRLFDLMTK 483
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+ +WN MI GYG+ GQG+EAL++F M + + P VTF+ VL ACSH+G + +G E
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
M RYG P+++HY C++D+LGRAG L A + AM E VW TLL A R+H
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHK 603
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+T+LA ++++F+L+P + G +VL+SNI+ A Y + +R T +++ + K PG + I
Sbjct: 604 DTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Query: 588 ELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
E+ + H F S D+SHP+ K IY +L L ++RE G
Sbjct: 664 EIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 233/492 (47%), Gaps = 16/492 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L T++ + H+ ++ G + +T L S + YA +F ++ P+
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ-RPD 82
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
VF +N ++ GF N+ L F H+R+ L P+ T+ I + IH
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G G D ++ +GS +V Y K +E+A KVF+ +P +D +LWN M++GY + +
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 218 KALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
++++VFR + E + T+ +L A+ + + G +H + K G S V+
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
I +Y K + +F + DI ++N+++ + G + +L LF ++ +G +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T +++P HL + IHGY + + + S ++ AL +Y+K +
Sbjct: 323 STLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHAS--------VSTALTTVYSKLNEIE 371
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F + +K + SWN MI GY +G ++A+ +F M +++ P+ VT +LSAC+
Sbjct: 372 SARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACA 431
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
G LS G+ L+ S +I T +I M + G + EA L + + N V W
Sbjct: 432 QLGALSLGKWVHDLVRST-DFESSIYVSTALIGMYAKCGSIAEARRL-FDLMTKKNEVTW 489
Query: 517 RTLLAASRLHGN 528
T+++ LHG
Sbjct: 490 NTMISGYGLHGQ 501
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 158/326 (48%), Gaps = 4/326 (1%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
T + L A L+ G +IHS +TG +T I++YSKC ++K +F
Sbjct: 222 TTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFRE 281
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+P++ YNAMI G+ SN L F + G T L+ +M +
Sbjct: 282 FR-KPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY- 339
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
IHG K + +AL Y K +E A K+F+E P + + WNAM++GY Q
Sbjct: 340 --AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G A+ +FR M K + T+T +LSA +G G+ VH +V ++S + V
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
ALI MY K + EA +F++M +K+ +WN++++ + G L +F ML++G
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQI 358
P VTF VL ACSH + G +I
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEI 543
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 306/594 (51%), Gaps = 18/594 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ A ++L+ G ++H + + G + +LI+MY KC ++ A VF + + N
Sbjct: 11 LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR-DRN 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++ A++ GF + A L MR P++YT +K CC V IH
Sbjct: 70 VVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYAQIGEF 216
GL + G + S+LV Y K + +A +VF+ L + WNAMV+GYA G
Sbjct: 130 GLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189
Query: 217 HKALEVFRRMSK-EGIWM-SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGVPV 272
AL VFR M + EG FT +L A +G + G VH + G+ S +
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAIL 249
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
AL+DMY K + + A+++FE +E K++ W +++ H Q G L LF R +G
Sbjct: 250 AGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGA 309
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD S+V+ + A + GRQ+H Y + + DV N+++DMY KC
Sbjct: 310 RPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGT--------DVSAGNSIVDMYLKC 361
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G +A+ +F +M +V SW M+ G G G G+EA+ +F M ++PDEVT++ +L
Sbjct: 362 GLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALL 421
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
SACSH+G + + R + + V P EHY C++D+LGRAG+L EA +L MP E
Sbjct: 422 SACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPT 481
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW+TLL+A R+H + + A + ++ + NYV +SN+ G++ E +R
Sbjct: 482 VGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDA 541
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISS---DRSHPEAKSIYAELHSLTARLREH 623
MR++ ++K GCSW+E+ +H F + +HP+A I L + R+RE
Sbjct: 542 MRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQ 595
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 216/478 (45%), Gaps = 47/478 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ASL+ C + G IH +R G + + +SL+ +YSK ++ A VF+
Sbjct: 108 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 167
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMR--QLGVLPDKYTFPCLIKCCCDVMAVL 151
+ T+NAM+SG+ L F MR + PD++TF L+K C + A
Sbjct: 168 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 227
Query: 152 EVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
E ++H + G + + ALV+ Y+KC+ + A++VFE L ++V+ W A+V G
Sbjct: 228 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 287
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+AQ G+ +ALE+FRR + G ++ V+ L + GR VH +K +
Sbjct: 288 HAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTD 347
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V N+++DMY K EA +F M ++ SW +++ + G + LF+ M +
Sbjct: 348 VSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRA 407
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G +PD VT+ +L ACSH + R+ Y
Sbjct: 408 GGVEPDEVTYLALLSACSHAGLVDECRR-------------------------------Y 436
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
C +R + V K + M+ G G+ +EA D+ M ++P +
Sbjct: 437 FSC--IRRDRTVRPKAEH-----YACMVDLLGRAGELREARDLIRTM---PMEPTVGVWQ 486
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
+LSAC ++ GRE ++ + G P +Y + ++L AG+ E +++ AM
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAMDGDNPV--NYVTLSNVLAEAGEWRECHKVRDAM 542
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 12/240 (5%)
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ G+L A + G +HG + KMG+ S + N LIDMY K + A E+F M
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALMHGR 356
++++ SW ++M + G+ G LRL M +A P+ T S L AC + G
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNI 415
IHG V G ++ DV + ++L+ +Y+K G + DA+ VF +A+WN
Sbjct: 127 GIHGLCVRAGYQEH-------DV-VASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNA 178
Query: 416 MILGYGMDGQGKEALDMFSCMC--EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
M+ GY G G++AL +F M E + +PDE TF +L ACS G +G + M +
Sbjct: 179 MVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTA 238
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 310/553 (56%), Gaps = 11/553 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
++ LQ C ++ + G IH+ L+ + S ++N Y KC ++ Y L +F+ +
Sbjct: 219 VSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP- 277
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVK 154
E NV +++A+I+GF + + L F M G ++P+++T + C ++
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+I+ + +LG +V++ +A + ++ + + EAL+VFE +D V WNAM+ GY Q+
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
F + +RRM+ E + FT +L+ L + F+ G VHG +VK GY + + V N
Sbjct: 398 YFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+L DMY K + + + + F+ M D+ SW + QCG L + M + G +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRL 516
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ T +T L +C++LA++ G++ HG + G D+D V ++NAL+DMY KCG
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLG-------TDVD-VCVDNALLDMYAKCGC 568
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
M A +VF M ++ V SW MI+G+ +GQ KEAL +F M + + +P+ +TF+ VL+A
Sbjct: 569 MTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNA 628
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CS GF+ + ++ M + +G+ P+ +HY C++++LGRAG + EA +L L MP + +
Sbjct: 629 CSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSL 688
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
VW+TLL A +HG+ + + AA+ L+ Y+L+SN++ G ++ V +R M
Sbjct: 689 VWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGDNWDSVGILRELME 748
Query: 575 QQNVRKNPGCSWI 587
++V+K PG SW+
Sbjct: 749 TRDVKKVPGSSWM 761
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 297/543 (54%), Gaps = 9/543 (1%)
Query: 82 QMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLI 141
Q KY+ +F++ PN+F YN++I+GF +N + LD F +R+ G+ +TFP ++
Sbjct: 60 QTKYSYLLFSHTQF-PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVL 118
Query: 142 KCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVV 201
K C + +H LV K G + DV ++L++ Y + +A K+F+E+P R VV
Sbjct: 119 KACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVV 178
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W A+ +GY G +A+++F++M + G+ + + VLSA + +G +G + +
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
+M V L+++Y K + +A +F+ M EKDI +W++++ + +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
LF +ML +PD + L +C+ L AL G G++ + + ++FM
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW--------GISLIDRHEFLTNLFM 350
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
NAL+DMY KCG+M VF +M +KD+ N I G +G K + +F + +
Sbjct: 351 ANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
PD TF+G+L C H+G + G F + Y + T+EHY C++D+ GRAG L++AY
Sbjct: 411 SPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAY 470
Query: 502 ELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGG 561
L MP N +VW LL+ RL +T LAE + + LEP + GNYV +SNIY GG
Sbjct: 471 RLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGG 530
Query: 562 KYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+++E ++R M ++ ++K PG SWIEL+ +H F++ D+SHP + IYA+L L +R
Sbjct: 531 RWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Query: 622 EHG 624
G
Sbjct: 591 LMG 593
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 195/393 (49%), Gaps = 13/393 (3%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
LI C V +K+IH + L D ++ + L+ L + + + +F +
Sbjct: 19 LISVACTVN---HLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPN 75
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+ L+N+++NG+ FH+ L++F + K G+++ FT VL A K G +H
Sbjct: 76 IFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHS 135
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+VVK G++ V M +L+ +Y + +A ++F+ + ++ + +W ++ + + G H
Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHRE 195
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+ LF +M+ G +PD VL AC H+ L G I Y+ + KN
Sbjct: 196 AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS-------- 247
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ L+++Y KCG M A+ VF M +KD+ +W+ MI GY + KE +++F M +
Sbjct: 248 FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE 307
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKPD+ + VG LS+C+ G L G + L++ R+ + + +IDM + G +
Sbjct: 308 NLKPDQFSIVGFLSSCASLGALDLGEWGISLID-RHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+E+ M E + V+ ++ +G+ L+
Sbjct: 367 GFEVFKEM-KEKDIVIMNAAISGLAKNGHVKLS 398
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 192/394 (48%), Gaps = 14/394 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H FT L+ C ++ + G ++HS +++ G ++TSL+++YS ++ A
Sbjct: 110 HGFTFPLV---LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAH 166
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + + +V T+ A+ SG+ ++ + +D F M ++GV PD Y ++ C V
Sbjct: 167 KLFDEIP-DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHV 225
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ + I + ++ + + ++ + LVN Y KC ME+A VF+ + +D+V W+ M+
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GYA + +E+F +M +E + +F++ G LS+ +G G ++ + +
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ + + NALIDMY K + E+F+ M+EKDI N+ ++ + G+ + +F +
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQT 405
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI-VVNGLAKNGSCKDIDDVFMNNALM 386
G PD TF +L C H + G + I V L + V ++
Sbjct: 406 EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT--------VEHYGCMV 457
Query: 387 DMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILG 419
D++ + G + DA + M + + W ++ G
Sbjct: 458 DLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ + L CA L G+ S + R + + +LI+MY+KC M VF +
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE- 152
E ++ NA ISG N F +LG+ PD TF L+ C C +++
Sbjct: 375 K-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL-CGCVHAGLIQD 432
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGY 210
++ + + L V +V+ + + +++A ++ ++P+R + ++W A+++G
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Query: 211 AQIGEFHKALEVFRRMSKEGIW 232
+ + A V + + W
Sbjct: 493 RLVKDTQLAETVLKELIALEPW 514
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 311/584 (53%), Gaps = 48/584 (8%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
S ++ Y++ +++ A +F+++ E +V ++NAM+SG+ + + D F+ M
Sbjct: 96 FSWNLMLTGYARNRRLRDARMLFDSMP-EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPH 154
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
+ ++ L+ + E +++ F+ D ++ + L+ Y+K + +
Sbjct: 155 ----KNSISWNGLLAAYVRSGRLEEARRL----FESKSDWELISCNCLMGGYVKRNMLGD 206
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A ++F+++P+RD++ WN M++GYAQ G+ +A RR+ +E FT T ++ A +
Sbjct: 207 ARQLFDQIPVRDLISWNTMISGYAQDGDLSQA----RRLFEESPVRDVFTWTAMVYAYVQ 262
Query: 248 MGFFKNGRVVHGI----------VVKMGY------DSG-----------VPVMNALIDMY 280
G R V V+ GY D G + N +I Y
Sbjct: 263 DGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGY 322
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
+ + +A +F+MM ++D SW +I+ + Q G ++ + + M G + TF
Sbjct: 323 CQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
L AC+ +AAL G+Q+HG +V G K + NAL+ MY KCG + +A
Sbjct: 383 CALSACADIAALELGKQVHGQVVRTGYEKG--------CLVGNALVGMYCKCGCIDEAYD 434
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF + KD+ SWN M+ GY G G++AL +F M A +KPDE+T VGVLSACSH+G
Sbjct: 435 VFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGL 494
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+G E+ M YG+ P +HY C+ID+LGRAG L EA L MP E + W LL
Sbjct: 495 TDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALL 554
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
ASR+HGN +L E AA+ VF++EP + G YVL+SN+Y A G++ +V +R MRQ V+K
Sbjct: 555 GASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQK 614
Query: 581 NPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
PG SW+E+++ +HTF D HPE IYA L L +++ G
Sbjct: 615 TPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEG 658
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 203/476 (42%), Gaps = 73/476 (15%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T I+ + + AL VF+ + N +YNAMISG+ N D F+ M
Sbjct: 37 TKAISTHMRNGHCDLALCVFDAMPLR-NSVSYNAMISGYLRNAKFSLARDLFDKM----- 90
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P K D++ + ++ Y + + + +A
Sbjct: 91 -PHK---------------------------------DLFSWNLMLTGYARNRRLRDARM 116
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F+ +P +DVV WNAM++GY + G +A +VF RM + + + G+L+A + G
Sbjct: 117 LFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGR 172
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ R + + D + N L+ Y K +G+A ++F+ + +D+ SWN++++
Sbjct: 173 LEEARR----LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISG 228
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY--------- 361
+ Q DG L R+ D+ T++ ++ A L R++
Sbjct: 229 YAQ----DGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSY 284
Query: 362 -IVVNGLAKNGSCKDIDDVFMN---------NALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
+++ G A+ ++F N ++ Y + G + A+ +F M ++D
Sbjct: 285 NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSV 344
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW +I GY +G +EA++M M + TF LSAC+ L G++ +
Sbjct: 345 SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQV 404
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
R G ++ M + G ++EAY++ + ++ + V W T+LA HG
Sbjct: 405 -VRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHK-DIVSWNTMLAGYARHG 458
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
D+F N ++ Y + +RDA+M+F M +KDV SWN M+ GY G EA D+F M
Sbjct: 94 DLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP 153
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG--RAG 495
+ +++ G+L+A SG L + R L ES+ E +C M G +
Sbjct: 154 HK----NSISWNGLLAAYVRSGRLEEARR---LFESK----SDWELISCNCLMGGYVKRN 202
Query: 496 QLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GHCGNYVLMS 554
L +A +L +P + + W T+++ G DL++ A+R+F+ P + M
Sbjct: 203 MLGDARQLFDQIPVR-DLISWNTMISGYAQDG--DLSQ--ARRLFEESPVRDVFTWTAMV 257
Query: 555 NIYVAGGKYEEVLDIRHTMRQQ 576
YV G +E + M Q+
Sbjct: 258 YAYVQDGMLDEARRVFDEMPQK 279
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T +L CA L+ G+++H ++RTG L +L+ MY KC + A VF
Sbjct: 379 STFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQG 438
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV-MAVL 151
+ ++ ++N M++G+ + F + L F M GV PD+ T ++ C +
Sbjct: 439 VQ-HKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDR 497
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ H + G+ + + +++ + +EEA + +P D W A+
Sbjct: 498 GTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGAS 557
Query: 207 -VNGYAQIGE 215
++G ++GE
Sbjct: 558 RIHGNMELGE 567
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 285/490 (58%), Gaps = 9/490 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + I C + A+ E +++H + V++G+ LV Y++C +++A V +
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R VV W M++GY+Q +AL++F +M + G + +T+ VL++ G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH ++VK ++S + V ++L+DMY K + + EA +F+ + E+D+ S +I++ + Q
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L LF ++ S G Q + VTF+T++ A S LA+L +G+Q+H I+ L
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF---- 246
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
V + N+L+DMY+KCG + ++ VF M ++ V SWN M++GYG G G E + +F
Sbjct: 247 ----VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK 302
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
+ ++KPD VT + VLS CSH G + +G + + + HY C+ID+LGR+
Sbjct: 303 DL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRS 361
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L +A L MP E+ P +W +LL A R+H N + E+ AQ++ ++EP + GNYV++S
Sbjct: 362 GRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILS 421
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
NIY A G +++V +R M ++ V K PG SWI L +HTF SS+R HP K I A++
Sbjct: 422 NIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIK 481
Query: 615 SLTARLREHG 624
+ ++ G
Sbjct: 482 EIFVDIKAAG 491
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 178/327 (54%), Gaps = 2/327 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++ C + L +G+++H+ M+ + T L+ MY +C + A V + + E
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP-E 73
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ MISG+ + + LD F M + G +P++YT ++ C ++ + K++
Sbjct: 74 RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQV 133
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L+ K + +++GS+L++ Y K + ++EA +VF+ LP RDVV A+++GYAQ G
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 193
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL++FR++ EG+ + T T +++AL + G+ VH ++++ V + N+L
Sbjct: 194 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSL 253
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMY K + + +F+ M E+ + SWN+++ + + G + LF + L +PD
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDS 312
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIV 363
VT VL CSH + G I +V
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVV 339
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 19/287 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+TLAT + S C+ ++ +G+++HS +++T +SL++MY+K ++ A V
Sbjct: 112 YTLATVLTS---CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 168
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L E +V + A+ISG+ + LD F + G+ + TF L+ + +
Sbjct: 169 FDTLP-ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLAS 227
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H L+ + L V + ++L++ Y KC + + +VF+ + R VV WNAM+ G
Sbjct: 228 LDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG 287
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK------ 263
Y + G H+ + +F+ + KE + T+ VLS G G + VVK
Sbjct: 288 YGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 346
Query: 264 -MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
G+ +ID+ G+ + +AL + E M + S W S++
Sbjct: 347 HTGH------YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 274/501 (54%), Gaps = 43/501 (8%)
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+IH ++F+ GLD + L +Y ++ ++ +F V W A+++G+A G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL + +M +G+ + FT S+++ + + G+ +H VK+G+DS + V
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFT----FSSILKLCPIEPGKALHSQAVKLGFDSDLYVRT 163
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFS------------------------------- 303
L+D+Y +G V A ++F+ M EK + S
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WN ++ + Q G + L LF RML A +P+ VT +VL AC L AL GR +H YI
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
NG+ N V + AL+DMY+KCGS+ DA++VF K+ KDV +WN MI+GY M
Sbjct: 284 NNGIQFN--------VHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMH 335
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G +EAL +F MC L P +TF+G+LSAC HSG++++G + M+ YG+ P IEH
Sbjct: 336 GFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEH 395
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLE 543
Y C++++LGRAG + +AYEL M E +PV+W TLL A RLHG L E + +
Sbjct: 396 YGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQN 455
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSH 603
+ G Y+L+SNIY A G ++ V +R M+ V+K PGCS IE+ + +H F++ +H
Sbjct: 456 LANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNH 515
Query: 604 PEAKSIYAELHSLTARLREHG 624
P+ K IY L + L+ HG
Sbjct: 516 PKRKEIYMMLEEINGWLKSHG 536
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 197/450 (43%), Gaps = 77/450 (17%)
Query: 53 EIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
+IH+ + R G+ P+ L Y+ ++ Y++ +F + P+VF + A+I G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGR-TQNPSVFFWTAIIHGHALR 106
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L+F+ M GV P+ +TF ++K C + K +H KLG D D+Y+
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVR 162
Query: 173 SALVNTYLKCQFMEEALKVFEELP-------------------------------LRDVV 201
+ L++ Y + + A ++F+ +P RD V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
WN M++GY Q G ++AL +FRRM K + TV VLSA +G ++GR VH +
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
G V V AL+DMY K + +A +F+ +++KD+ +WNS++ + G L
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
+LF M G P +TF +L AC H + G
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG-------------------------- 376
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
D++ K M+D + K + + M+ G G ++A ++ M +
Sbjct: 377 ----WDIFNK---MKDEYGIEPK-----IEHYGCMVNLLGRAGHVEQAYELVKNM---NI 421
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
+PD V + +L AC G ++ G + + L+
Sbjct: 422 EPDPVLWGTLLGACRLHGKIALGEKIVELL 451
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 34/315 (10%)
Query: 66 SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM 125
S +S+T+++ Y+K ++ A +F+ + E + +N MI G+ N + L F M
Sbjct: 189 SLVSLTAMLTCYAKHGELDAARVLFDGME-ERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 126 RQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFM 185
+ P++ T ++ C + A+ + +H + G+ +V++G+ALV+ Y KC +
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 307
Query: 186 EEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL 245
E+A VF+++ +DVV WN+M+ GYA G +AL++F+ M + G+ + T G+LSA
Sbjct: 308 EDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 367
Query: 246 IMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
G+ V G+D + N + D YG E I +
Sbjct: 368 GHSGW-----------VTEGWD----IFNKMKDEYGI---------------EPKIEHYG 397
Query: 306 SIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
++ + + G+ + L M +PD V + T+L AC + G +I +V
Sbjct: 398 CMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQ 454
Query: 366 GLAKNGSCKDIDDVF 380
LA +G+ + +++
Sbjct: 455 NLANSGTYILLSNIY 469
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 327/618 (52%), Gaps = 40/618 (6%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+LQ C + +G+ +H +L+ G + L+NMY K + A +F+ + E
Sbjct: 44 ALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP-ER 102
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
N ++ +I G+ + + ++ F + + G + + F ++K IH
Sbjct: 103 NTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIH 162
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+FKLG + + ++G+AL++ Y C ++ A +VF+ + +D+V W MV +A+ F
Sbjct: 163 ACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFK 222
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL++F +M G + FT V A + + F G+ VHG +K Y+ + V AL+
Sbjct: 223 EALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALL 282
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
D+Y K + +A FE + +KD+ W+ ++ + Q + +F +M A P+
Sbjct: 283 DLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQF 342
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TF++VL AC+ + L G QIH +++ GL DVF++NALMD+Y KCG M +
Sbjct: 343 TFASVLQACATMEGLNLGNQIHCHVIKIGLHS--------DVFVSNALMDVYAKCGRMEN 394
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL---------------- 441
+ +F + ++ +WN +I+G+ G G++AL +F M E ++
Sbjct: 395 SMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACAS 454
Query: 442 ---------------KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
KPD++TFVGVLSAC+++G L QG+ + M +G+ P IEHYTC
Sbjct: 455 LAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTC 514
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++ +LGR G L++A +L +P + + +VWR LL A +H + +L I+AQRV ++EP
Sbjct: 515 MVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQD 574
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
+VL+SN+Y +++ V +R M+++ V+K PG SWIE + +H+F D SHPE
Sbjct: 575 KATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEV 634
Query: 607 KSIYAELHSLTARLREHG 624
+ I L L + ++ G
Sbjct: 635 RVINGMLEWLHMKTKKAG 652
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 212/443 (47%), Gaps = 24/443 (5%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+PF T L+L + G IH+ + + G + T+LI+ YS C ++ A
Sbjct: 138 NPFVFTTI---LKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAR 194
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + ++ ++ M++ F ND + L F+ MR +G P+ +TF + K C +
Sbjct: 195 EVFDGI-LYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGL 253
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A K +HG K +LD+Y+G AL++ Y K +++A + FEE+P +DV+ W+ M+
Sbjct: 254 EAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMI 313
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
YAQ + +A+E+F +M + + ++FT VL A M G +H V+K+G
Sbjct: 314 ARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 373
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S V V NAL+D+Y K + ++E+F ++ +WN+++ H Q G+ + LRLF M
Sbjct: 374 SDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 433
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
L Q VT+S+ L AC+ LAAL G QIH V D ++
Sbjct: 434 LEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK------------PDKLTFVGVLS 481
Query: 388 MYTKCGSMRDAQMVFTKMSKKD-----VASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
G + Q FT M + + + M+ G G +A+ + E +
Sbjct: 482 ACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID---EIPFQ 538
Query: 443 PDEVTFVGVLSACSHSGFLSQGR 465
P + + +L AC + GR
Sbjct: 539 PSVMVWRALLGACVIHNDIELGR 561
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/571 (33%), Positives = 310/571 (54%), Gaps = 27/571 (4%)
Query: 53 EIHSYMLRTGIIDSPLSITSLIN-MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
+IH+ ++ T +I + + L++ + SK + YA VF + +PN F N M+ +
Sbjct: 29 QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH-QPNSFICNTMVKCYTE 87
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
+ + L F+ MR+ G+L D YT+P ++K C + +LE + G K G DV++
Sbjct: 88 SSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L++ Y +C A VF+ +D+V WN+M+ GY GE A +F M + +
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV-----MNALIDMYGKGKCV 286
+ G MG RV +DS +P N++ID Y K +
Sbjct: 208 VSWSIMIDGYGKK---MGEVNRARVF--------FDS-MPTRDLVSWNSMIDGYAKVGEM 255
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A EIF+ M +K++ SW+ ++ + + L LF +ML G +PD V+ + AC
Sbjct: 256 EVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSAC 315
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S L AL GR IH Y+ N + + D+ + AL+DMY KCGS +A+ +F M
Sbjct: 316 SQLGALDQGRWIHLYMKRNRM--------LLDIVVQTALVDMYLKCGSXDEARXIFNSMP 367
Query: 407 KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGRE 466
+++V SWN+MI+G GM+G GKEAL+ F M ++ D++ F+GVL ACSH+ +++G
Sbjct: 368 ERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEGLH 427
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH 526
M+ Y + P +EHY C++D+LGRAGQL++ + +MP + N +W +LL A R+H
Sbjct: 428 IFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACRIH 487
Query: 527 GNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSW 586
N LAEI +R+ +L+ G YVLMSNIY G +E +L IR M+++ ++K+ G S
Sbjct: 488 QNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGRSV 547
Query: 587 IELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
IE+ + F+S ++SH + I + SL
Sbjct: 548 IEVDGNVEEFVSGEKSHILREEIELVIWSLA 578
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ + ++ C+ L +G+ IH YM R ++ + T+L++MY KC A +FN++
Sbjct: 307 SVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNSM 366
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE- 152
E NV ++N MI G N F + L+ F M + D F ++ C V E
Sbjct: 367 P-ERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEG 425
Query: 153 ---VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
++ G V++L L+ Y LV+ + +++ + + +P++ + LW +++
Sbjct: 426 LHIFNQMKG-VYRLEPKLEHY--GCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLL 481
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/603 (31%), Positives = 320/603 (53%), Gaps = 15/603 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYML---RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
L++CA+ + L+ G+ IH +++ ++ I SLIN+Y KC + A VF+ L
Sbjct: 38 LKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD-LMP 96
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVK 154
E NV ++ AM+ G+ ++ F F+ L F M P+++ + K C + E K
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIG 214
+ HG K GL ++ + LV Y C EA++V ++LP D+ ++++ ++GY + G
Sbjct: 157 QFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 215 EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
F + EV RRM+KE + + T L + R +H +V++G++S V
Sbjct: 217 AFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASG 276
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
A+I+MYGK V A +F+ ++I +IM + Q + + L LF +M + P
Sbjct: 277 AIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
+ TF+ L + + L+ L HG +HG ++ +G + V + NAL++MY K GS
Sbjct: 337 NEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYR--------NHVMVGNALVNMYAKSGS 388
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ DA+ F+ M+ +D+ +WN MI G+ G G+E L+ F M A P+ +TF+GVL A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQA 448
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSH GF+ QG + + ++ V P ++HYTC++ +L +AG +A + P E + V
Sbjct: 449 CSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
WR LL A + N L + A+ P G YVL+SNI+ ++E V ++R M
Sbjct: 509 AWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMN 568
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDC--CAGTLF 632
++ V+K PG SWI +++ H F++ + HPE IYA++ + +++R G AG
Sbjct: 569 KRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFH 628
Query: 633 DSD 635
D D
Sbjct: 629 DVD 631
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 1/221 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L+LC++ +L ++IHS M+R G + ++INMY KC ++ YA VF+N
Sbjct: 239 TYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNT 298
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ V M + F F + L+ F+ M V P++YTF + ++ +
Sbjct: 299 HAQNIVLNTTIMDAYFQDKSFE-EALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHG 357
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
+HGLV K G V +G+ALVN Y K +E+A K F + RD+V WN M+ G++
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHH 417
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
G + LE F RM G +R T GVL A +GF + G
Sbjct: 418 GLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVEQG 458
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 324 FDRMLSAGFQPDLVTF-----STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDD 378
+D++ S +P F + +L C++ + L G IHG+++V + D
Sbjct: 14 WDKLASLVPKPKKPLFPIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAK-----D 68
Query: 379 VFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC- 437
V+ N+L+++Y KCG A+ VF M +++V SW M+ GY G E L +F M
Sbjct: 69 VYQINSLINLYVKCGETVRARKVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVF 128
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ +P+E V +CS SG + +G++F
Sbjct: 129 SDESRPNEFVATVVFKSCSSSGRIEEGKQF 158
>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
Length = 644
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 299/557 (53%), Gaps = 46/557 (8%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T + + C + NL+ G++IH+Y+ +S + + +SLI MY KC + A +F +
Sbjct: 101 TLVTIFEACGNPENLEDGKKIHAYL----SCNSDVVLGSSLITMYGKCGSLSEACLMFQS 156
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ E N +N+++ F +D ++ + M Q G LP + TF ++ + ++
Sbjct: 157 ME-EWNTVAWNSLMGAFVQHDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRH 215
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +H + + G + DV + +ALVN Y KC + EA++VF+ +P DV+LW+A+++ +
Sbjct: 216 GKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVN 275
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD----- 267
E+ ++L +FR+M EG + T+ VLSA + G+ +H VV+ GY+
Sbjct: 276 CAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIV 335
Query: 268 ---------------------------SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+GVP+ NALI MYG+ G+A ++F+ M E+D
Sbjct: 336 GNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAERD 395
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+WN++M+V EQ + +++LF +ML G PD VT TVL C+ L AL G+ I
Sbjct: 396 AVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICA 455
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
++ L+ N + NA+++MY KCGS +A+ +F+ M +D SWN +I Y
Sbjct: 456 WLDHTPLSANQ--------MIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSWNALIGAY 507
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G +G+ A +F M PD VTF +LS CSH G L + ++ M Y V
Sbjct: 508 GSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVEAE 567
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
HY C++D+LGR G++ EA E+A MP +P+VW TLL+A ++HG T + AA+R+
Sbjct: 568 TGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAERLV 627
Query: 541 QLEPGHCGNYVLMSNIY 557
+L+P YV++S IY
Sbjct: 628 ELDPEVTSAYVVLSTIY 644
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 254/513 (49%), Gaps = 37/513 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL--SCE 96
L+ C+ +L +G++IH+ + R+ P+ LI MY KC + A VF L +
Sbjct: 2 LRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSV 61
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N+ + A+I+ + N + F M+ G PD+ T + + C + + + KKI
Sbjct: 62 VNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKI 121
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L + DV +GS+L+ Y KC + EA +F+ + + V WN+++ + Q
Sbjct: 122 HAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRV 178
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A+E++ M + G SR T VL+A+ + ++G++VH +V+ G++ V V AL
Sbjct: 179 EAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTAL 238
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++MYGK V EA+E+F+ M D+ W+++++ H C ++ +LRLF +M G +P+
Sbjct: 239 VNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNN 298
Query: 337 VTFSTVLPACSHLAALMHGRQIH--------------GYIVVNGLAKNGSCKDIDDVF-- 380
VT +VL AC AL G+ IH G +V+ K GS +D DVF
Sbjct: 299 VTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHR 358
Query: 381 --------MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
+ NAL+ MY +CGS A+ +F M+++D +WN M+ G++++ +
Sbjct: 359 VPRRNGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQL 418
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY---TCVID 489
F M + PD+VT + VL+ C+ L +G+ ++ P + +++
Sbjct: 419 FRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDH----TPLSANQMIGNAILN 474
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
M + G +EA + M + V W L+ A
Sbjct: 475 MYAKCGSRDEARRIFSVMQGR-DAVSWNALIGA 506
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 17/374 (4%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEEL---P 196
L++ C + ++IH + + D +G+ L+ YLKC + +A +VF +L
Sbjct: 1 LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
+ ++V W A++ YA+ G+ A+ +F++M EG R T+ + A ++G+
Sbjct: 61 VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKK 120
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+H + +S V + ++LI MYGK + EA +F+ MEE + +WNS+M Q
Sbjct: 121 IHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDR 177
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+ + L+ ML GF P TF TVL A S L +L HG+ +H +V G
Sbjct: 178 VEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHE-------- 229
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DDV + AL++MY KCGS+ +A VF +M + DV W+ +I + + +E+L +F M
Sbjct: 230 DDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKM 289
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDMLGRAG 495
+P+ VT V VLSAC L G+ ++E+ Y + + ++ M G+ G
Sbjct: 290 QLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGN--AIVSMYGKCG 347
Query: 496 QLNEAYELALAMPN 509
L +A+++ +P
Sbjct: 348 SLEDAWDVFHRVPR 361
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 200/464 (43%), Gaps = 63/464 (13%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
T+ I+SL+ +L+ G+ +H ++ G D + T+L+NMY KC + A+ V
Sbjct: 201 LTVLAAISSLE------SLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAVEV 254
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++A+IS + + L F M+ G P+ T ++ C A
Sbjct: 255 FDRMP-RHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQA 313
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL------------ 197
+ K IH V + G + D+ +G+A+V+ Y KC +E+A VF +P
Sbjct: 314 LETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALIS 373
Query: 198 --------------------RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
RD V WN M++ Q+ ++++FR+M +EG + T
Sbjct: 374 MYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVT 433
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ VL+ + + G+ + + + + NA+++MY K EA IF +M+
Sbjct: 434 ILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQ 493
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG-- 355
+D SWN+++ + ++F M G PD VTF+T+L CSH L
Sbjct: 494 GRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVK 553
Query: 356 --RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVAS 412
R + V + C ++D+ + G + +A+ V KM + D
Sbjct: 554 WFRWMREDYYVEAETGHYGC-----------IVDLLGRLGRVPEAEEVAEKMPAGTDPIV 602
Query: 413 WNIMILG---YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
W ++ +G +GK A + +L P+ + VLS
Sbjct: 603 WTTLLSACQVHGETQRGKRAAERL-----VELDPEVTSAYVVLS 641
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 285/490 (58%), Gaps = 9/490 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + I C + A+ E +++H + V++G+ LV Y++C +++A V +
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R VV W M++GY+Q +AL++F +M + G + +T+ VL++ G
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH ++VK ++S + V ++L+DMY K + + EA +F+ + E+D+ S +I++ + Q
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 190
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L LF ++ S G Q + VTF+T++ A S LA+L +G+Q+H I+ L
Sbjct: 191 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF---- 246
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
V + N+L+DMY+KCG + ++ VF M ++ V SWN M++GYG G G E + +F
Sbjct: 247 ----VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK 302
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
+ ++KPD VT + VLS CSH G + +G + + + HY C+ID+LGR+
Sbjct: 303 DL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRS 361
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L +A L MP E+ P +W +LL A R+H N + E+ AQ++ ++EP + GNYV++S
Sbjct: 362 GRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILS 421
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
NIY A G +++V +R M ++ V K PG SWI L +HTF SS+R HP K I A++
Sbjct: 422 NIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIK 481
Query: 615 SLTARLREHG 624
+ ++ G
Sbjct: 482 EIFVDIKAAG 491
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 178/327 (54%), Gaps = 2/327 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++ C + L +G+++H+ M+ + T L+ MY +C + A V + + E
Sbjct: 15 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP-E 73
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ MISG+ + + LD F M + G +P++YT ++ C ++ + K++
Sbjct: 74 RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQV 133
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L+ K + +++GS+L++ Y K + ++EA +VF+ LP RDVV A+++GYAQ G
Sbjct: 134 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 193
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL++FR++ EG+ + T T +++AL + G+ VH ++++ V + N+L
Sbjct: 194 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSL 253
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMY K + + +F+ M E+ + SWN+++ + + G + LF + L +PD
Sbjct: 254 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDS 312
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIV 363
VT VL CSH + G I +V
Sbjct: 313 VTLLAVLSGCSHGGLVDEGLDIFDTVV 339
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 19/287 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+TLAT + S C+ ++ +G+++HS +++T +SL++MY+K ++ A V
Sbjct: 112 YTLATVLTS---CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 168
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L E +V + A+ISG+ + LD F + G+ + TF L+ + +
Sbjct: 169 FDTLP-ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLAS 227
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H L+ + L V + ++L++ Y KC + + +VF+ + R VV WNAM+ G
Sbjct: 228 LDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG 287
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK------ 263
Y + G H+ + +F+ + KE + T+ VLS G G + VVK
Sbjct: 288 YGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 346
Query: 264 -MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
G+ +ID+ G+ + +AL + E M + S W S++
Sbjct: 347 HTGH------YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 387
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 310/587 (52%), Gaps = 23/587 (3%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
++LI+M ++ + A VF+ L E V + +IS + + A + ++ F + G
Sbjct: 192 SALIDMLARNGDLASARKVFDGL-IEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGF 250
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC---QFMEE 187
PD+YT +I C ++ +V ++H L ++GL D + LV+ Y K Q M+
Sbjct: 251 EPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDY 310
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIG-EFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A KVFE +P DV+ W A+++GY Q G + +K + +F M E I + T + +L +
Sbjct: 311 ANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCA 370
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ +GR VH V+K S V NAL+ MY + C+ EA +F + E+ +
Sbjct: 371 SISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP--- 427
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
C L R++ TF++++ A + + L G+Q+H + G
Sbjct: 428 -------CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAG 480
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
D F++N+L+ MY++CG + DA F ++ ++V SW MI G G
Sbjct: 481 FGS--------DRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYA 532
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+ AL +F M +KP++VT++ VLSACSH G + +G+E+ M+ +G++P +EHY C
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+L R+G + EA E MP +A+ +VW+TLL A R H N ++ EI A+ V +LEP
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRD 652
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
YVL+SN+Y G ++EV IR MR N+ K G SW+E+++ H F + D SHP A
Sbjct: 653 PAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRA 712
Query: 607 KSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFEKHRLYLEEVIA 653
+ IY +L +L +++ G ++ D + E++ L E IA
Sbjct: 713 QDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIA 759
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 239/505 (47%), Gaps = 51/505 (10%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
+L+ G+ +H +LR ++D + SL+ +YS+C + A VF+ + ++ ++ AM
Sbjct: 63 DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-CDVMAVLEVKKIHGLVFKLG 164
S N L M + G+LP+ YT C + L + GLV K+G
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182
Query: 165 L-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
L DV +GSAL++ + + A KVF+ L + VV+W +++ Y Q +A+E+F
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK- 282
++G R+T++ ++SA +G + G +H + ++MG S V L+DMY K
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302
Query: 283 --GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG-NHDGTLRLFDRMLSAGFQPDLVTF 339
G+ + A ++FE M + D+ SW ++++ + Q G + + LF ML+ +P+ +T+
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
S++L +C+ ++ GRQ+H +++ + A + + NAL+ MY + G M +A+
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHT--------VGNALVSMYAESGCMEEAR 414
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP------------DEVT 447
VF ++ ++ M C+ E + P T
Sbjct: 415 RVFNQLYER----------------------SMIPCITEGRDFPLDHRIVRMDVGISSST 452
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
F ++SA + G L++G++ L M + G ++ M R G L +A +
Sbjct: 453 FASLISAAASVGMLTKGQQ-LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACR-SFNE 510
Query: 508 PNEANPVVWRTLLAASRLHGNTDLA 532
+ N + W ++++ HG + A
Sbjct: 511 LKDRNVISWTSMISGLAKHGYAERA 535
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/574 (32%), Positives = 310/574 (54%), Gaps = 20/574 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ +A +CA + +L +G+E+HS + TG T+LI+MY+KC + A V
Sbjct: 403 FTYASLLA---ICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKV 459
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN + E NV ++NA IS +D + F MR+ V PD TF L+ C
Sbjct: 460 FNQMP-ERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ + IHG + + G+ + ++ +AL++ Y +C + +A +VF + RD+ WNAM+
Sbjct: 519 LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAA 578
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
Q G A ++FR+ EG ++T VL A+ + GR++HG+V K G+
Sbjct: 579 NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKD 638
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ V+ LI MY K + +A +F ++EKD+ WN+++ + L+LF +M
Sbjct: 639 IRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQL 698
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
G PD T+ST L AC+ L A+ HG++IH + G+ D ++N+L++MY
Sbjct: 699 EGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMET--------DTRVSNSLIEMY 750
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
++CG + A+ VF KM +D+ SWN +I GY +GQG AL+ + M A + P++ TF
Sbjct: 751 SRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFT 810
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+LS+ + G Q +FL ++ + + P+ +HY ++ LGRAG L EA E +
Sbjct: 811 SILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISA 870
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVF----QLEPGHCGNYVLMSNIYVAGGKYEE 565
E+ ++W +LL A R+H N +LAE A + + Q P C LMS IY A G++E+
Sbjct: 871 ESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQ--LMS-IYAAAGRWED 927
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISS 599
V ++ TM++ + C+ IE+ H FI++
Sbjct: 928 VSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIAN 960
Score = 250 bits (639), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/490 (30%), Positives = 261/490 (53%), Gaps = 14/490 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLSCEP 97
LQ C +L +G+++H +M R+ + + + LI+MYSKC ++ A VF + +
Sbjct: 107 LQQCVLAKSLAEGKKVHDHM-RSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAME-DK 164
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V ++NAMISG+ + + D F M++ G+ P++ TF ++ C +A+ ++IH
Sbjct: 165 DVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIH 224
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K G + DV + +AL+N Y KC +E A KVF E+ R+VV W AM++GY Q G+
Sbjct: 225 SRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSR 284
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL +FR++ + GI ++ + +L A G +H + + G + V V NALI
Sbjct: 285 EALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALI 344
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + + A ++F+ + + +WN+++ + + G + RLF M GFQPD
Sbjct: 345 SMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKF 403
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T++++L C+ A L G+++H I G D+ + AL+ MY KCGS +
Sbjct: 404 TYASLLAICADRADLDRGKELHSQIASTGWQT--------DLTVATALISMYAKCGSPEE 455
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A+ VF +M +++V SWN I GKEA F M + PD +TF+ +L++C+
Sbjct: 456 ARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTS 515
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L +GR ++ +++G++ +I M GR G L +A E+ + + W
Sbjct: 516 PEDLERGR-YIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRR-DLGSWN 573
Query: 518 TLLAASRLHG 527
++AA+ HG
Sbjct: 574 AMIAANVQHG 583
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/492 (31%), Positives = 247/492 (50%), Gaps = 18/492 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I+ L C L+ G++IHS + + G T+LINMY KC ++ A VFN +
Sbjct: 203 TFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEM 262
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV ++ AMISG+ + + + L F + + G+ P+K +F ++ C + + E
Sbjct: 263 R-ERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEG 321
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K+H + + GL+ +V +G+AL++ Y +C + A +VF+ L + WNAM+ GY +
Sbjct: 322 LKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE- 380
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A +FR M ++G +FT +L+ G+ +H + G+ + + V
Sbjct: 381 GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVA 440
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHD---GTLRLFDRMLSA 330
ALI MY K EA ++F M E+++ SWN+ ++ C HD + F +M
Sbjct: 441 TALISMYAKCGSPEEARKVFNQMPERNVISWNAFISC---CCRHDLGKEAFQAFKQMRRD 497
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
PD +TF T+L +C+ L GR IHG I G+ N + NAL+ MY
Sbjct: 498 DVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNN--------HVANALISMYG 549
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG++ DA+ VF ++ ++D+ SWN MI G A D+F K D+ TF+
Sbjct: 550 RCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFIN 609
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VL A ++ L GR L+E + G I T +I M + G L +A E + E
Sbjct: 610 VLRAVANLEDLDAGRMIHGLVE-KGGFGKDIRVLTTLIKMYSKCGSLRDA-ENVFSTVQE 667
Query: 511 ANPVVWRTLLAA 522
+ V W +LAA
Sbjct: 668 KDVVCWNAMLAA 679
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 306/588 (52%), Gaps = 11/588 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + GQE+H ++++ G +LI MYS+ + A +F+ + +
Sbjct: 131 LKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIE-NKD 189
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V +++ MI + + + LD M + V P + + ++ + K +H
Sbjct: 190 VVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHA 249
Query: 159 LVFKLGL--DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
V + G V + +AL++ Y+KC+ + A +VF+ L ++ W AM+ Y
Sbjct: 250 YVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNL 309
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
++ + +F +M EG++ + T+ ++ G + G+++H ++ G+ + + A
Sbjct: 310 NEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAF 369
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMYGK V A +F+ + KD+ W+++++ + Q D +F M G +P+
Sbjct: 370 IDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNE 429
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T ++L C+ +L G+ IH YI G+ D+ + + +DMY CG +
Sbjct: 430 RTMVSLLMICAKAGSLEMGKWIHSYIDKQGIK--------GDMILKTSFVDMYANCGDID 481
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A +F + + +D++ WN MI G+ M G G+ AL++F M + P+++TF+G L ACS
Sbjct: 482 TAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACS 541
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
HSG L +G+ M +G P +EHY C++D+LGRAG L+EA+EL +MP N V+
Sbjct: 542 HSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVF 601
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+ LAA +LH N L E AA++ LEP G VLMSNIY + ++ +V IR M+ +
Sbjct: 602 GSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDE 661
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ K PG S IE+ LH FI DR HP+AK +Y + + +L + G
Sbjct: 662 GIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAG 709
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 233/490 (47%), Gaps = 30/490 (6%)
Query: 45 QTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA 104
NL + Q++H + ++T S C + L + S + ++
Sbjct: 53 HINLNETQQLHGHFIKT----------------SSNCSYRVPLAALESYSSNAAIHSF-- 94
Query: 105 MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLG 164
+I+ + N+ + +MR D + P ++K CC + + L +++HG V K G
Sbjct: 95 LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNG 154
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
DV++ +AL+ Y + + A +F+++ +DVV W+ M+ Y + G +AL++ R
Sbjct: 155 FHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLR 214
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY--DSGVPVMNALIDMYGK 282
M + S + + L + K G+ +H V++ G SGVP+ ALIDMY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ + A +F+ + + I SW +++ + C N + +RLF +ML G P+ +T ++
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
+ C AL G+ +H + + NG + + + A +DMY KCG +R A+ VF
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLS--------LVLATAFIDMYGKCGDVRSARSVF 386
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
KD+ W+ MI Y + EA D+F M ++P+E T V +L C+ +G L
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
G+ ++ + G+ + T +DM G ++ A+ L A + + +W +++
Sbjct: 447 MGKWIHSYID-KQGIKGDMILKTSFVDMYANCGDIDTAHRL-FAEATDRDISMWNAMISG 504
Query: 523 SRLHGNTDLA 532
+HG+ + A
Sbjct: 505 FAMHGHGEAA 514
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 167/326 (51%), Gaps = 5/326 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDS---PLSITSLINMYSKCCQMKYALFVFNN 92
I+ + A +L+ G+ +H+Y++R G PL T+LI+MY KC + YA VF+
Sbjct: 229 ISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC-TALIDMYVKCENLAYARRVFDG 287
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
LS + ++ ++ AMI+ + + +G+ F M G+ P++ T L+K C A+
Sbjct: 288 LS-KASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALEL 346
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K +H + G L + + +A ++ Y KC + A VF+ +D+++W+AM++ YAQ
Sbjct: 347 GKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQ 406
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+A ++F M+ GI + T+ +L G + G+ +H + K G + +
Sbjct: 407 NNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMIL 466
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
+ +DMY + A +F ++DI WN++++ G+ + L LF+ M + G
Sbjct: 467 KTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGV 526
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQI 358
P+ +TF L ACSH L G+++
Sbjct: 527 TPNDITFIGALHACSHSGLLQEGKRL 552
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 137/264 (51%), Gaps = 2/264 (0%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ ++ C L+ G+ +H++ LR G S + T+ I+MY KC ++ A VF++
Sbjct: 330 TMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSF 389
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ ++ ++AMIS + N+ + D F HM G+ P++ T L+ C ++
Sbjct: 390 KSK-DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMG 448
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K IH + K G+ D+ + ++ V+ Y C ++ A ++F E RD+ +WNAM++G+A
Sbjct: 449 KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMH 508
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G ALE+F M G+ + T G L A G + G R+ H +V + G+ V
Sbjct: 509 GHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEH 568
Query: 273 MNALIDMYGKGKCVGEALEIFEMM 296
++D+ G+ + EA E+ + M
Sbjct: 569 YGCMVDLLGRAGLLDEAHELIKSM 592
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L +CA +L+ G+ IHSY+ + GI + TS ++MY+ C + A +F
Sbjct: 431 TMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE- 489
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + ++ +NAMISGF + L+ F M LGV P+ TF + C + E
Sbjct: 490 ATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEG 549
Query: 154 KKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++ H +V + G V +V+ + ++EA ++ + +P+R + A
Sbjct: 550 KRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNI---------AV 600
Query: 213 IGEFHKALEVFRRMSKEGIWMSR 235
G F A ++ + + K G W ++
Sbjct: 601 FGSFLAACKLHKNI-KLGEWAAK 622
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/490 (34%), Positives = 285/490 (58%), Gaps = 9/490 (1%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + I C + A+ E +++H + V++G+ LV Y++C +++A V +
Sbjct: 43 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P R VV W M++GY+Q +AL++F +M + G + +T+ VL++ G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH ++VK ++S + V ++L+DMY K + + EA +F+ + E+D+ S +I++ + Q
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK 222
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L LF ++ S G Q + VTF+T++ A S LA+L +G+Q+H I+ L
Sbjct: 223 GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF---- 278
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
V + N+L+DMY+KCG + ++ VF M ++ V SWN M++GYG G G E + +F
Sbjct: 279 ----VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFK 334
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
+ ++KPD VT + VLS CSH G + +G + + + HY C+ID+LGR+
Sbjct: 335 DL-HKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRS 393
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMS 554
G+L +A L MP E+ P +W +LL A R+H N + E+ AQ++ ++EP + GNYV++S
Sbjct: 394 GRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILS 453
Query: 555 NIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELH 614
NIY A G +++V +R M ++ V K PG SWI L +HTF SS+R HP K I A++
Sbjct: 454 NIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIK 513
Query: 615 SLTARLREHG 624
+ ++ G
Sbjct: 514 EIFVDIKAAG 523
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 178/327 (54%), Gaps = 2/327 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A++ C + L +G+++H+ M+ + T L+ MY +C + A V + + E
Sbjct: 47 AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP-E 105
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++ MISG+ + + LD F M + G +P++YT ++ C ++ + K++
Sbjct: 106 RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQV 165
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H L+ K + +++GS+L++ Y K + ++EA +VF+ LP RDVV A+++GYAQ G
Sbjct: 166 HSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLD 225
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+AL++FR++ EG+ + T T +++AL + G+ VH ++++ V + N+L
Sbjct: 226 EEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSL 285
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
IDMY K + + +F+ M E+ + SWN+++ + + G + LF + L +PD
Sbjct: 286 IDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPDS 344
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIV 363
VT VL CSH + G I +V
Sbjct: 345 VTLLAVLSGCSHGGLVDEGLDIFDTVV 371
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 19/287 (6%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
+TLAT + S C+ ++ +G+++HS +++T +SL++MY+K ++ A V
Sbjct: 144 YTLATVLTS---CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRV 200
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ L E +V + A+ISG+ + LD F + G+ + TF L+ + +
Sbjct: 201 FDTLP-ERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLAS 259
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ K++H L+ + L V + ++L++ Y KC + + +VF+ + R VV WNAM+ G
Sbjct: 260 LDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMG 319
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK------ 263
Y + G H+ + +F+ + KE + T+ VLS G G + VVK
Sbjct: 320 YGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALL 378
Query: 264 -MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIM 308
G+ +ID+ G+ + +AL + E M + S W S++
Sbjct: 379 HTGH------YGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLL 419
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
LR M G + + AC AL GRQ+H ++ + + VF
Sbjct: 27 LRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMI--------TARYRPAVF 78
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ L+ MY +CG++ DA+ V +M ++ V SW MI GY + EALD+F M A
Sbjct: 79 LGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAG 138
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY----TCVIDMLGRAGQ 496
P+E T VL++CS + QG++ L+ V E + + ++DM ++
Sbjct: 139 CIPNEYTLATVLTSCSGPQSIYQGKQVHSLL-----VKTNFESHMFVGSSLLDMYAKSEN 193
Query: 497 LNEAYELALAMPNE 510
+ EA + +P
Sbjct: 194 IQEARRVFDTLPER 207
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/574 (32%), Positives = 321/574 (55%), Gaps = 19/574 (3%)
Query: 58 MLRTGIIDSPLSITSLI----NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
M+ TG I S+ LI +M S Y++F E +V T+N+M+ F +++
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTR---ELDVLTWNSMLRAFVNSN 57
Query: 114 FAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L + M + +PD++TFP L+K C ++ K +HG V K L D+YI
Sbjct: 58 MPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIE 117
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
+ L+N Y C ++ A +FE + R+ V+W +M++GY + ++AL ++++M ++G
Sbjct: 118 TTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFS 177
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
T+ ++SA + G +H + +M + +AL++MY K + A ++
Sbjct: 178 PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG--FQPDLVTFSTVLPACSHLA 350
F+ + +KD+++W++++ + + L+LF R ++ G +P+ VT V+ AC+ L
Sbjct: 238 FDKLSDKDVYAWSALIFGYVKNNRSTEALQLF-REVAGGSNMRPNEVTILAVISACAQLG 296
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L GR +H YI + V +NN+L+DM++KCG + A+ +F MS KD+
Sbjct: 297 DLETGRWVHDYIT--------RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDL 348
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN M+ G+ + G G+EAL F M L+PDE+TF+GVL+ACSH+G + +G++
Sbjct: 349 ISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYE 408
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
+E+ YGV EHY C++D+L RAG L EA E MP + + +W ++L A R++ N +
Sbjct: 409 IEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLE 468
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L E AA+ + +LEP + G Y+L+SNIY + EV +R M ++ ++K PGCS + +
Sbjct: 469 LGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVID 528
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ H+F++ D SHPE I L + +L+ G
Sbjct: 529 NIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAG 562
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +A + CA +L+ G+ +H Y+ RT S SLI+M+SKC + A +F+++
Sbjct: 284 TILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM 343
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
S + ++ ++N+M++GF + + L F M+ + PD+ TF ++ C V E
Sbjct: 344 SYK-DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402
Query: 154 KKIHGLVFKL-GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
KK+ + L G+ L +V+ + + EA + +PL+ D +W +M+
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/543 (34%), Positives = 304/543 (55%), Gaps = 13/543 (2%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTY 102
A +N KG IH+Y ++ I + L+NMY KC + AL +F+ + E NV ++
Sbjct: 16 AQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP-ERNVVSW 74
Query: 103 NAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+++++G N A L F+ M + G V P+++TF ++ C V + +I+ LV
Sbjct: 75 SSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVV 134
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ GL+ +V++ +A + ++ + EAL++FE P+RD V WN M+ GY + + +
Sbjct: 135 RSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSS--EQIP 192
Query: 222 VF-RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
VF R M++EG+ FT L+ L + K G VH +V+ GY + V N+L+DMY
Sbjct: 193 VFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMY 252
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K + + E + F+ + KD+ SW + Q G L + +M G +P+ T +
Sbjct: 253 LKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLA 312
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
T L AC+ LA++ G+Q HG + K GS D+D V ++NAL+DMY KCG M A
Sbjct: 313 TALNACACLASMEEGKQFHGLRI-----KLGS--DVD-VCVDNALLDMYAKCGCMDSAWT 364
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF + + V SW MI+ +GQ EAL +F M E ++P+ +TF+ VL ACS GF
Sbjct: 365 VFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGF 424
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +G ++L M+ YG++P +HY C++ +LGRAG + EA EL L MP VW+TLL
Sbjct: 425 VDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLL 484
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRK 580
+A ++HG+ + ++AA+ + + +YVL+SN+ ++ V+ +R M +NV+K
Sbjct: 485 SACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKK 544
Query: 581 NPG 583
PG
Sbjct: 545 VPG 547
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 169/316 (53%), Gaps = 4/316 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +++LQ C+ N+ + +I+S ++R+G+ + + + + + ++ AL +F
Sbjct: 109 TFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETS 168
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
V T+N M+ G+ +F+ + + F+ +M + GV PD++TF + + ++
Sbjct: 169 PIRDTV-TWNTMMGGYL--EFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKM 225
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H + + G D+ +G++LV+ YLK Q +EE K F+E+P +DV W M +G Q
Sbjct: 226 GMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQ 285
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
GE AL V +M K G+ ++FT+ L+A + + G+ HG+ +K+G D V V
Sbjct: 286 WGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCV 345
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY K C+ A +F + + SW +++ Q G L++FD M
Sbjct: 346 DNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSV 405
Query: 333 QPDLVTFSTVLPACSH 348
+P+ +TF VL ACS
Sbjct: 406 EPNYITFICVLYACSQ 421
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 6/282 (2%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT A+ + L A ++L+ G ++H+ ++R+G D SL++MY K +++
Sbjct: 208 FTFASALTGL---ATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKA 264
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F+ + +V ++ M G L M+++GV P+K+T + C + +
Sbjct: 265 FDEIP-HKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLAS 323
Query: 150 VLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNG 209
+ E K+ HGL KLG D+DV + +AL++ Y KC M+ A VF R VV W M+
Sbjct: 324 MEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMA 383
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDS 268
AQ G+ +AL++F M + + + T VL A GF G + + + G
Sbjct: 384 CAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIP 443
Query: 269 GVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMT 309
G ++ + G+ + EA E I M + W ++++
Sbjct: 444 GEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLS 485
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/602 (32%), Positives = 318/602 (52%), Gaps = 17/602 (2%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
++T + ++ C +++G ++H Y++R+G +D P SL++MY+ M+ A +F+
Sbjct: 136 VSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADN-DMERAEELFD 194
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP-DKYTFPCLIKCCCDVMAV 150
+ CE +V +++ MI G+ A L F M + D T ++K C + +
Sbjct: 195 EM-CERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDI 253
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ +HG+V GLD D+++G+++++ Y KC E A K F E+P R+ V WN++++G
Sbjct: 254 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGL 313
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
+ + +AL +F M K G T+ +L + + +H IV++ GY+
Sbjct: 314 VRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNE 373
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
V+N+LID Y K + A ++F+ ++ KD SW++++ CG D + LF M A
Sbjct: 374 FVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQA 433
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+P+ VT ++L A S A L + HG + GLA +V + A++DMY
Sbjct: 434 QEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAA--------EVAVGTAILDMYA 485
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
KCG + ++ F ++ +K++ SW MI GM+G ++AL + S M LKP+ VT +
Sbjct: 486 KCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLS 545
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
VLSACSH G + +G F M +GV P +EHY+C++DML RAG+LN A L MP
Sbjct: 546 VLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER 605
Query: 511 AN--PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
+W LL+A R GN+ L AA RV +LEP Y L S++Y A G + +
Sbjct: 606 MRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAAR 665
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYA---ELHS-LTARLREHG 624
+R ++ + VR G S + ++D F++ D SHP A I+ +LH + R
Sbjct: 666 MRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRAGEIWGVVEQLHDCMKIAERNES 725
Query: 625 DC 626
DC
Sbjct: 726 DC 727
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 256/513 (49%), Gaps = 24/513 (4%)
Query: 72 SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL 131
S+++ Y K + ALFVF+++ +V ++N MI G S + KGL +F R +
Sbjct: 75 SVLDFYMKTGALDSALFVFDSMRSRDSV-SWNIMIHGHLSRGASDKGLWWFRQARVIAFE 133
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV-YIGSALVNTYLKCQFMEEALK 190
P+ T I C + A+ E K+HG + + G LD+ + ++L++ Y ME A +
Sbjct: 134 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGF-LDIPSVQNSLLSMYADND-MERAEE 191
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM-SKEGIWMSRFTVTGVLSALIMMG 249
+F+E+ RDV+ W+ M+ GY Q GE AL++F M S I + T+ VL A G
Sbjct: 192 LFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTG 251
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
GR VHG+V+ G D + V N++IDMY K A + F M ++ SWNSI++
Sbjct: 252 DISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIIS 311
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
+ H L LF M AGF+ D VT +L +C + + IH ++ G
Sbjct: 312 GLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYEL 371
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEA 429
N F+ N+L+D Y+KC + A +F ++ KD SW+ MI G+ G+ EA
Sbjct: 372 NE--------FVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEA 423
Query: 430 LDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
+ +F M +A+ KP+ VT + +L A S S L + + + + R G+ + T ++D
Sbjct: 424 IALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSK-WAHGIAIRRGLAAEVAVGTAILD 482
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG--NTDLAEIAAQRVFQLEPGHC 547
M + G++ + + +P E N V W ++AA ++G LA ++ ++ L+P
Sbjct: 483 MYAKCGEIGLSRKAFDQIP-EKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKP--- 538
Query: 548 GNYVLMSNIYVA---GGKYEEVLDIRHTMRQQN 577
N V ++ A GG EE L M Q +
Sbjct: 539 -NVVTTLSVLSACSHGGLVEEGLSFFENMVQDH 570
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 191/392 (48%), Gaps = 16/392 (4%)
Query: 164 GLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVF 223
G D G+++++ Y+K ++ AL VF+ + RD V WN M++G+ G K L F
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
R+ + T+ + A +G + G +HG +++ G+ V N+L+ MY
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADN 184
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTV 342
+ A E+F+ M E+D+ SW+ ++ + Q G L+LF M S A + D +T +V
Sbjct: 185 D-MERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMV 401
L AC++ + GR +HG ++ C+ +D D+F+ N+++DMY+KC A
Sbjct: 244 LKACANTGDISMGRSVHGVVI---------CRGLDYDLFVGNSIIDMYSKCDDHESAFKA 294
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M ++ SWN +I G + EAL +F M +A + DEVT V +L +C + F+
Sbjct: 295 FNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY--FV 352
Query: 462 SQGR-EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ +F+ + R+G +ID + + A++L + + + V W ++
Sbjct: 353 DPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTK-DTVSWSAMI 411
Query: 521 AASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
A G D A Q + Q + G +L
Sbjct: 412 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTIL 443
>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 634
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 307/593 (51%), Gaps = 20/593 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ S A L +H++ +R+ + S T+L ++Y+K + AL
Sbjct: 19 PFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALK 78
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + NV ++ +++ + L F+ MR GV D Y + + C D
Sbjct: 79 VFDEMP-HKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAG 137
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLGLD Y+ + L Y +C ++ AL + RDV W +++
Sbjct: 138 LLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVIS 197
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMS----RFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
Y Q G +A+E F RM +E ++ +T V++A + + G +H +
Sbjct: 198 AYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARK 257
Query: 265 GYDSGVPVMNALIDMYGKGK-CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G+ V N+L+ +Y + C+ A +F KD+ SW++I++ + Q G + L
Sbjct: 258 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFAL 317
Query: 324 FDRML--SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
F M S +P+ T +++L C+ A+L GRQ+H V GL + +
Sbjct: 318 FREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHA--------MI 369
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL+DMY K GSM DA +VF+ K DV SW MI+GY G K+AL++F MC L
Sbjct: 370 RSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGL 429
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KPD VTF+GVL+AC H+G + G +L M YG+ P EHY CV+D+LGRAG++NEA
Sbjct: 430 KPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAE 489
Query: 502 EL-ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
EL NE + VVW +LL A G + + AA+R + EP G +V M+N+Y +
Sbjct: 490 ELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASK 549
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIEL-KDG--LHTFISSDRSHPEAKSIY 610
G++ E RH M+Q+ V K G S I + +G + F++SDR+HP+ +IY
Sbjct: 550 GQWHEAAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIY 602
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 313/612 (51%), Gaps = 48/612 (7%)
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
S +L++ + + A +F+ + +V TYN MIS ++ +F+ L
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSV-TYNVMISSHANHGLVSLARHYFD----L 156
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
D ++ ++ V E + + F + DV +AL++ Y++ M EA
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGL----FNSRTEWDVISWNALMSGYVQWGKMSEA 212
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++F+ +P RDVV WN MV+GYA+ G+ +A +F + FT T V+S
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQN 268
Query: 249 GFFKNGR----------------VVHGIVVKMGYDSG-----------VPVMNALIDMYG 281
G + R +V + + D V N ++ Y
Sbjct: 269 GMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+ + EA +F+ M +KD SW +++ + Q G + TL+LF M G + F+
Sbjct: 329 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 388
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL C+ +AAL G Q+HG ++ G F+ NAL+ MY KCG+M DA+
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVG--------CFVGNALLAMYFKCGNMEDARNA 440
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M ++DV SWN MI GY G GKEAL++F M KPD++T VGVL+ACSHSG +
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G + M +GV EHYTC+ID+LGRAG+L EA++L MP E + +W LL
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
ASR+H N +L AA+++F+LEP + G YVL+SNIY + GK+ + +R M ++ V+K
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGF 641
PG SWIE+++ +HTF + D HPE + IYA L L R+++ G A + D
Sbjct: 621 PGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEK 680
Query: 642 EKHRLYLEEVIA 653
E Y E +A
Sbjct: 681 EHMLKYHSEKLA 692
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 165/389 (42%), Gaps = 43/389 (11%)
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
L+ +V + + +++ + +A ++F +P R +NAM+ GY+ G A +FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+ + ++ +L AL + + R G+ +M V N +I +
Sbjct: 94 AIPRP----DNYSYNTLLHALAVSSSLADAR---GLFDEMPVRDSV-TYNVMISSHANHG 145
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A F++ EKD SWN ++ + + G + LF+ + + D+++++ ++
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTEWDVISWNALMS 201
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ R++ + DV N ++ Y + G M +A+ +F
Sbjct: 202 GYVQWGKMSEARELFDRMPGR------------DVVSWNIMVSGYARRGDMVEARRLFDA 249
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+DV +W ++ GY +G +EA +F M E + V++ +++A + +
Sbjct: 250 APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEA 305
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+E +M R + + ++ +AG L EA + MP + + V W +LAA
Sbjct: 306 KELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYS 359
Query: 525 LHGNTDLAEIAAQRVFQL--EPGHCGNYV 551
G ++ QL E G CG +V
Sbjct: 360 QGG-------CSEETLQLFIEMGRCGEWV 381
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 52/332 (15%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N I + + V +A +F M + ++N+++ + +G L L + A +
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSA----NGRLPLAASLFRAIPR 97
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +++T+L A + ++L R + + V D N ++ + G
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVR------------DSVTYNVMISSHANHG 145
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A+ F +KD SWN M+ Y +G+ +EA +F+ E D +++ ++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW----DVISWNALMS 201
Query: 454 ACSHSGFLSQGREFLPLMESR------------------------YGVVPTIE--HYTCV 487
G +S+ RE M R + P + +T V
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GH 546
+ + G L EA + AMP E N V W ++AA D A+ +F + P +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMD----EAKELFNMMPCRN 316
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
++ M Y G EE + TM Q++
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA L+ G ++H ++R G +L+ MY KC M+ A F + E +
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERD 448
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIH 157
V ++N MI+G+ + F + L+ F+ MR PD T ++ C V + + +
Sbjct: 449 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFY 508
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
+ G+ + +++ + + EA + +++P D +W A++ G ++I
Sbjct: 509 SMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL-GASRI--- 564
Query: 217 HKALEVFRRMSKE 229
H+ E+ R +++
Sbjct: 565 HRNPELGRSAAEK 577
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/469 (36%), Positives = 273/469 (58%), Gaps = 8/469 (1%)
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+V+++H G+ ++ + + LV Y + +++A +F+ + +RD V W+ MV G+A
Sbjct: 753 QVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFA 812
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
++G++ FR + + G +T+ V+ A + + GR++H IV K G D
Sbjct: 813 KVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 872
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V AL+DMYGK + + +A +F+ M E+D+ +W ++ + +CGN + +L LFD+M G
Sbjct: 873 VCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 932
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD V TV+ AC+ L A+ R I YI DV + A++DM+ K
Sbjct: 933 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL--------DVILGTAMIDMHAK 984
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CG + A+ +F +M +K+V SW+ MI YG GQG++ALD+F M + + P+++T V +
Sbjct: 985 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL 1044
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
L ACSH+G + +G F M Y V ++HYTCV+D+LGRAG+L+EA +L +M E
Sbjct: 1045 LYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEK 1104
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ +W L A R H + LAE AA + +L+P + G+Y+L+SNIY G++E+V IR
Sbjct: 1105 DEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRD 1164
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
M Q+ ++K PG +WIE+ + H F D +HP +K IY L SL +L
Sbjct: 1165 LMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKL 1213
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 171/493 (34%), Positives = 279/493 (56%), Gaps = 12/493 (2%)
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
L L K+ L+ C + +V+++H G+ ++ + + L+ Y + +++
Sbjct: 57 LQRLNPKFYISALVNC----RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDD 112
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+ + +RD V W+ MV G+A++G++ FR + + G +T+ V+ A
Sbjct: 113 AYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD 172
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + GR++H IV K G D V AL+DMY K + + +A +F+ M+E+D+ +W +
Sbjct: 173 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVM 232
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ + +CG + +L LF++M G PD V TV+ AC+ L A+ R I YI
Sbjct: 233 IGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKF 292
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
DV + A++DMY KCG + A+ +F +M +K+V SW+ MI YG GQG+
Sbjct: 293 QL--------DVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 344
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+ALD+F M + + PD++T +L ACSH+G + +G F M Y V ++HYTCV
Sbjct: 345 KALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCV 404
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
+D+LGRAG+L+EA +L +M E + +W L A R H + LAE AA + +L+ +
Sbjct: 405 VDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNP 464
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
G+YVL+SNIY G++E+V IR M Q+ ++K PG +WIE+ + H F D +HP +K
Sbjct: 465 GHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSK 524
Query: 608 SIYAELHSLTARL 620
IY L SL+ +L
Sbjct: 525 EIYEMLKSLSNKL 537
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 197/368 (53%), Gaps = 9/368 (2%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL + +++H+ G++++ + LI YS + A +F+ + C + +++ M+
Sbjct: 74 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM-CVRDSVSWSVMV 132
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
GF F + + G PD YT P +I+ C D+ + + IH +V+K GLD
Sbjct: 133 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 192
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
LD ++ +ALV+ Y+KC+ +E+A +F+++ RD+V W M+ GYA+ G+ +++L +F +M
Sbjct: 193 LDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 252
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
+EG+ + + V+ A +G R++ + + + V + A+IDMY K CV
Sbjct: 253 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 312
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
A EIF+ MEEK++ SW++++ + G L LF MLS+G PD +T +++L AC
Sbjct: 313 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYAC 372
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
SH + G + + + ++ S + DV ++D+ + G + +A + M+
Sbjct: 373 SHAGLVEEGLRF-----FSSMWEDYSVR--TDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425
Query: 407 -KKDVASW 413
+KD W
Sbjct: 426 IEKDEGLW 433
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 192/369 (52%), Gaps = 9/369 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
TNL + +++H G++ + + L+ YS + A +F+ + C + +++ M
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGM-CVRDSVSWSVM 807
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ GF F + + G PD YT P +I+ C D+ + + IH +V+K GL
Sbjct: 808 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGL 867
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
DLD ++ +ALV+ Y KC+ +E+A +F+++ RD+V W M+ GYA+ G +++L +F +
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M +EG+ + + V+ A +G R + + + + V + A+IDM+ K C
Sbjct: 928 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
V A EIF+ MEEK++ SW++++ + G L LF ML +G P+ +T ++L A
Sbjct: 988 VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYA 1047
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA-QMVFTK 404
CSH + G + + + ++ S + DV ++D+ + G + +A +++ +
Sbjct: 1048 CSHAGLVEEGLRF-----FSXMWEDYSVR--XDVKHYTCVVDLLGRAGRLDEALKLIXSM 1100
Query: 405 MSKKDVASW 413
+KD W
Sbjct: 1101 TXEKDEGLW 1109
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 153/315 (48%), Gaps = 15/315 (4%)
Query: 1 MLSKISRINPFSSCFN-----FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIH 55
M+ +++ + +CF + + PF + + C NLQ G+ IH
Sbjct: 807 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVI-------RACRDLKNLQMGRLIH 859
Query: 56 SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
+ + G+ +L++MY KC +++ A F+F+ + E ++ T+ MI G+ A
Sbjct: 860 HIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMX-ERDLVTWTVMIGGYAECGNA 918
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L F+ MR+ GV+PDK ++ C + A+ + + I + + LDV +G+A+
Sbjct: 919 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 978
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ + KC +E A ++F+ + ++V+ W+AM+ Y G+ KAL++F M + GI ++
Sbjct: 979 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNK 1038
Query: 236 FTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE-IF 293
T+ +L A G + G R + V ++D+ G+ + EAL+ I
Sbjct: 1039 ITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIX 1098
Query: 294 EMMEEKDIFSWNSIM 308
M EKD W + +
Sbjct: 1099 SMTXEKDEGLWGAFL 1113
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 152/315 (48%), Gaps = 15/315 (4%)
Query: 1 MLSKISRINPFSSCFN-----FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIH 55
M+ +++ + +CF + + PF + + C NLQ G+ IH
Sbjct: 131 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVI-------RACRDLKNLQMGRLIH 183
Query: 56 SYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFA 115
+ + G+ +L++MY KC +++ A F+F+ + E ++ T+ MI G+ A
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQ-ERDLVTWTVMIGGYAECGKA 242
Query: 116 FKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
+ L F MR+ GV+PDK ++ C + A+ + + I + + LDV +G+A+
Sbjct: 243 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 302
Query: 176 VNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSR 235
++ Y KC +E A ++F+ + ++V+ W+AM+ Y G+ KAL++F M G+ +
Sbjct: 303 IDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDK 362
Query: 236 FTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
T+ +L A G + G R + + V ++D+ G+ + EAL++ +
Sbjct: 363 ITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIK 422
Query: 295 MME-EKDIFSWNSIM 308
M EKD W + +
Sbjct: 423 SMTIEKDEGLWGAFL 437
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/612 (33%), Positives = 313/612 (51%), Gaps = 48/612 (7%)
Query: 69 SITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
S +L++ + + A +F+ + +V TYN MIS ++ +F+ L
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVRDSV-TYNVMISSHANHGLVSLARHYFD----L 156
Query: 129 GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEA 188
D ++ ++ V E + + F + DV +AL++ Y++ M EA
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGL----FNSRTEWDVISWNALMSGYVQWGKMSEA 212
Query: 189 LKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMM 248
++F+ +P RDVV WN MV+GYA+ G+ +A +F + FT T V+S
Sbjct: 213 RELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQN 268
Query: 249 GFFKNGR----------------VVHGIVVKMGYDSG-----------VPVMNALIDMYG 281
G + R +V + + D V N ++ Y
Sbjct: 269 GMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYA 328
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
+ + EA +F+ M +KD SW +++ + Q G + TL+LF M G + F+
Sbjct: 329 QAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFAC 388
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
VL C+ +AAL G Q+HG ++ G F+ NAL+ MY KCG+M DA+
Sbjct: 389 VLSTCADIAALECGMQLHGRLIRAGYGVG--------CFVGNALLAMYFKCGNMEDARNA 440
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F +M ++DV SWN MI GY G GKEAL++F M KPD++T VGVL+ACSHSG +
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 462 SQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
+G + M +GV EHYTC+ID+LGRAG+L EA++L MP E + +W LL
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560
Query: 522 ASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
ASR+H N +L AA+++F+LEP + G YVL+SNIY + GK+ + +R M ++ V+K
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620
Query: 582 PGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGF 641
PG SWIE+++ +HTF + D HPE + IYA L L R+++ G A + D
Sbjct: 621 PGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEK 680
Query: 642 EKHRLYLEEVIA 653
E Y E +A
Sbjct: 681 EHMLKYHSEKLA 692
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 165/389 (42%), Gaps = 43/389 (11%)
Query: 165 LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
L+ +V + + +++ + +A ++F +P R +NAM+ GY+ G A +FR
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
+ + ++ +L AL + + R G+ +M V N +I +
Sbjct: 94 AIPRP----DNYSYNTLLHALAVSSSLADAR---GLFDEMPVRDSV-TYNVMISSHANHG 145
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A F++ EKD SWN ++ + + G + LF+ + + D+++++ ++
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTEWDVISWNALMS 201
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
+ R++ + DV N ++ Y + G M +A+ +F
Sbjct: 202 GYVQWGKMSEARELFDRMPGR------------DVVSWNIMVSGYARRGDMVEARRLFDA 249
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
+DV +W ++ GY +G +EA +F M E + V++ +++A + +
Sbjct: 250 APVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEA 305
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+E +M R + + ++ +AG L EA + MP + + V W +LAA
Sbjct: 306 KELFNMMPCR-----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQK-DAVSWAAMLAAYS 359
Query: 525 LHGNTDLAEIAAQRVFQL--EPGHCGNYV 551
G ++ QL E G CG +V
Sbjct: 360 QGG-------CSEETLQLFIEMGRCGEWV 381
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 132/332 (39%), Gaps = 52/332 (15%)
Query: 274 NALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQ 333
N I + + V +A +F M + ++N+++ + + +G L L + A +
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGY----SANGRLPLAASLFRAIPR 97
Query: 334 PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
PD +++T+L A + ++L R + + V D N ++ + G
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVR------------DSVTYNVMISSHANHG 145
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
+ A+ F +KD SWN M+ Y +G+ +EA +F+ E D +++ ++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEW----DVISWNALMS 201
Query: 454 ACSHSGFLSQGREFLPLMESR------------------------YGVVPTIE--HYTCV 487
G +S+ RE M R + P + +T V
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP-GH 546
+ + G L EA + AMP E N V W ++AA D A+ +F + P +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMD----EAKELFNMMPCRN 316
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
++ M Y G EE + TM Q++
Sbjct: 317 VASWNTMLTGYAQAGMLEEAKAVFDTMPQKDA 348
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA L+ G ++H ++R G +L+ MY KC M+ A F + E +
Sbjct: 390 LSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME-ERD 448
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIH 157
V ++N MI+G+ + F + L+ F+ MR PD T ++ C V + + +
Sbjct: 449 VVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFY 508
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
+ G+ + +++ + + EA + +++P D +W A++ G ++I
Sbjct: 509 SMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALL-GASRI--- 564
Query: 217 HKALEVFRRMSKE 229
H+ E+ R +++
Sbjct: 565 HRNPELGRSAAEK 577
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 289/533 (54%), Gaps = 50/533 (9%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
SLI+MY+KC +M A+ VF +L + ++N +I+GF K ++ + M++ G
Sbjct: 12 NSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGF 70
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
P++ T+ L+ C +K + + A
Sbjct: 71 EPNEVTYSNLLASC-----------------------------------IKARDVHSARA 95
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+F+++ V WN +++GY Q + +E+FRRM + + R T+ +LS+ +G
Sbjct: 96 MFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGI 155
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI--- 307
GR VH V+ + + V + L+DMY K +G A IF M E+D+ WNSI
Sbjct: 156 LDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISG 215
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+T+H + F +M G P ++++++ +CS L+++ HGRQIH ++ +G
Sbjct: 216 LTIHSL---NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGY 272
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+N V++ +AL+DMY KCG+M DA++ F M K++ +WN MI GY +G G
Sbjct: 273 DQN--------VYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGD 324
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
+A+++F M + KPD VTF+ VL+ CSHSG + + F ME+ YG++P EHYTC+
Sbjct: 325 KAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCL 384
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHC 547
ID LGRAG+ E L MP + +P++W LLAA +H N +L + AA+ +F+++P +
Sbjct: 385 IDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNP 444
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
YVL+SNIY + G++ + +R M + V K G SWI+ KDG+ F+ +D
Sbjct: 445 SPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKDGVRAFMVAD 497
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 176/372 (47%), Gaps = 47/372 (12%)
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
+ G D ++G++L++ Y KC M+EA+KVFE LP +V WN ++ G+ Q G KA+E
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYG 281
V M + G + T + +L++ I
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASCI----------------------------------- 85
Query: 282 KGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFST 341
K + V A +F+ + + +WN++++ + Q H T+ LF RM QPD T +
Sbjct: 86 KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 145
Query: 342 VLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMV 401
+L +CS L L GRQ+H V L N D+F+ + L+DMY+KCG + A+ +
Sbjct: 146 ILSSCSKLGILDFGRQVHS-ASVRFLLHN-------DMFVASGLVDMYSKCGQIGIARSI 197
Query: 402 FTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFL 461
F KM+++DV WN +I G + KEA D F M E + P E ++ ++++CS +
Sbjct: 198 FNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSI 257
Query: 462 SQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
GR+ +M+ Y + + +IDM + G +++A L N V W ++
Sbjct: 258 PHGRQIHAQVMKDGYD--QNVYVGSALIDMYAKCGNMDDA-RLFFDTMMMKNIVAWNEMI 314
Query: 521 AASRLHGNTDLA 532
+G D A
Sbjct: 315 HGYAQNGLGDKA 326
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 182/373 (48%), Gaps = 17/373 (4%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
K E+ S M G + ++ ++L+ K + A +F+ +S P+V T+N ++SG+
Sbjct: 57 KAVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKIS-RPSVTTWNTLLSGY 115
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ ++ F M+ V PD+ T ++ C + + +++H + L D+
Sbjct: 116 CQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDM 175
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ S LV+ Y KC + A +F ++ RDVV WN++++G +A + F++M +
Sbjct: 176 FVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMREN 235
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
GI + + ++++ + +GR +H V+K GYD V V +ALIDMY K + +A
Sbjct: 236 GIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDA 295
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
F+ M K+I +WN ++ + Q G D + LF+ ML+ +PD VTF VL CSH
Sbjct: 296 RLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHS 355
Query: 350 A----ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
A+ + + LA++ +C L+D + G + + + KM
Sbjct: 356 GLVDKAMAFFNSMENSYGIIPLAEHYTC-----------LIDALGRAGRFVEVEALIHKM 404
Query: 406 S-KKDVASWNIMI 417
K D W +++
Sbjct: 405 PCKDDPIIWEVLL 417
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 18/287 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLA ++S C+ L G+++HS +R + + + L++MYSKC Q+ A +F
Sbjct: 142 TLAVILSS---CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 198
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N ++ E +V +N++ISG + + DFF MR+ G++P + ++ +I C + ++
Sbjct: 199 NKMT-ERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSI 257
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH V K G D +VY+GSAL++ Y KC M++A F+ + ++++V WN M++GY
Sbjct: 258 PHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGY 317
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL-----SALI--MMGFFKNGRVVHGIVVK 263
AQ G KA+E+F M T VL S L+ M FF + +GI+
Sbjct: 318 AQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPL 377
Query: 264 MGYDSGVPVMNALIDMYGK-GKCVGEALEIFEMMEEKDIFSWNSIMT 309
+ LID G+ G+ V I +M + D W ++
Sbjct: 378 AEH------YTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 418
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/597 (31%), Positives = 311/597 (52%), Gaps = 21/597 (3%)
Query: 25 TFNHPFTLATC--IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
F PF C +A + C + +H++++++ T+ ++M+ KC
Sbjct: 648 NFTFPFVAKACARLAYIGYC---------EMVHTHLIKSPFWSDVFVGTATVDMFVKCDS 698
Query: 83 MKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
+ YA VF + + T+NAM+SGF + K F MR + PD T LI+
Sbjct: 699 LDYAAKVFERMPVR-DATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQ 757
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDV 200
++ +K +H +LG+DL + + ++ Y KC ++ A VFE + R V
Sbjct: 758 SASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTV 817
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGI 260
V WN++ +A GE A +R M ++ T + ++ GR++H
Sbjct: 818 VSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSH 877
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+ +G D + +N I MY K A +F++M + SW +++ + + G+ D
Sbjct: 878 AIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEA 937
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
L LF M G PDLVT +++ C +L G+ I G + G K D+V
Sbjct: 938 LALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKK-------DNVM 990
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK 440
+ NAL+DMY+KCGS+ +A+ +F S+K + +W MI GY ++G EA+++FS M +
Sbjct: 991 VCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLD 1050
Query: 441 LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
KP+ +TF+ VL AC+HSG L +G E+ +M+ Y + P ++HY+C++D+LGR G+L+EA
Sbjct: 1051 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEA 1110
Query: 501 YELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
EL M + + +W LL+A ++H N +AE AA +F LEP YV MSNIY A
Sbjct: 1111 LELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLEPQMAAPYVEMSNIYAAA 1170
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
G ++ IR M+ N++K PG S I++ HTF +R H E ++IY+ L+ L+
Sbjct: 1171 GMWDGFARIRSMMKLWNIKKYPGESVIQVNGKNHTFTVGERGHMENEAIYSTLNGLS 1227
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 211/446 (47%), Gaps = 16/446 (3%)
Query: 88 FVFNNLSCEPNVFTYNA---MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
+ L C P + + NA + + + + L F M++ G P+ +TFP + K C
Sbjct: 599 LIHRRLKCFPGLSSVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC 658
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
+ + + +H + K DV++G+A V+ ++KC ++ A KVFE +P+RD WN
Sbjct: 659 ARLAYIGYCEMVHTHLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWN 718
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
AM++G+ Q G K +FR M + I TV ++ + K +V+H +++
Sbjct: 719 AMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRL 778
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD--IFSWNSIMTVHEQCGNHDGTLR 322
G D V N I YGK + A +FE ++ D + SWNS+ G
Sbjct: 779 GVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFG 838
Query: 323 LFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMN 382
+ ML F+PDL TF + +C + L GR IH + + G+ +DI+ +
Sbjct: 839 HYRLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAI-----HLGTDQDIEAI--- 890
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N + MY+K G A+++F M + SW +MI GY G EAL +F M + +
Sbjct: 891 NTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVN 950
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP-TIEHYTCVIDMLGRAGQLNEAY 501
PD VT + ++S C G L G+ ++ YG + +IDM + G ++EA
Sbjct: 951 PDLVTLLSLISGCGKFGSLEIGK-WIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEAR 1009
Query: 502 ELALAMPNEANPVVWRTLLAASRLHG 527
++ +E V W T++A L+G
Sbjct: 1010 DI-FDNTSEKTMVTWTTMIAGYALNG 1034
>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
Length = 704
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 307/593 (51%), Gaps = 20/593 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
PF L+ S A L +H++ +R+ + S T+L ++Y+K + AL
Sbjct: 70 PFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALK 129
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ + NV ++ +++ + L F+ MR GV D Y + + C D
Sbjct: 130 VFDEMP-HKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACADAG 188
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLGLD Y+ + L Y +C ++ AL + RDV W +++
Sbjct: 189 LLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVIS 248
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMS----RFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
Y Q G +A+E F RM +E ++ +T V++A + + G +H +
Sbjct: 249 AYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARK 308
Query: 265 GYDSGVPVMNALIDMYGKGK-CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
G+ V N+L+ +Y + C+ A +F KD+ SW++I++ + Q G + L
Sbjct: 309 GFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFAL 368
Query: 324 FDRML--SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFM 381
F M S +P+ T +++L C+ A+L GRQ+H V GL + +
Sbjct: 369 FREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHA--------MI 420
Query: 382 NNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
+AL+DMY K GSM DA +VF+ K DV SW MI+GY G K+AL++F MC L
Sbjct: 421 RSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHVGL 480
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
KPD VTF+GVL+AC H+G + G +L M YG+ P EHY CV+D+LGRAG++NEA
Sbjct: 481 KPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAE 540
Query: 502 EL-ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAG 560
EL NE + VVW +LL A G + + AA+R + EP G +V M+N+Y +
Sbjct: 541 ELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYASK 600
Query: 561 GKYEEVLDIRHTMRQQNVRKNPGCSWIEL-KDG--LHTFISSDRSHPEAKSIY 610
G++ E RH M+Q+ V K G S I + +G + F++SDR+HP+ +IY
Sbjct: 601 GQWHEAAQERHMMKQKGVVKGAGWSSITVGGEGRRVGVFVASDRTHPQDSAIY 653
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 18/304 (5%)
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
A + + + +A ++F+ +P RD V + ++ G+A G+F A+ +F R+ +
Sbjct: 6 ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 65
Query: 234 S---RFTVTGVL---SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ F ++ V +A F + +H V+ S V V AL D+Y K C+G
Sbjct: 66 APADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSSVFVATALADVYAKAGCLG 125
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
AL++F+ M K++ SW +++ + G LR F M ++G D ++ L AC+
Sbjct: 126 LALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTACA 185
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
L GR++H + GL ++ N L +Y +C + A ++M
Sbjct: 186 DAGLLSRGREVHAFCAKLGLDSTP--------YVANTLATLYARCSDVDRALAAVSRMGT 237
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAK----LKPDEVTFVGVLSACSHSGFLSQ 463
+DVA+W +I Y G+ KEA++ F M + P+E T+ V++AC+ ++
Sbjct: 238 RDVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCL 297
Query: 464 GREF 467
G +
Sbjct: 298 GEQL 301
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 321/611 (52%), Gaps = 37/611 (6%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
NL K +E+ M + S ++++ Y++ + A VF+ + E N ++NA++
Sbjct: 141 NLGKARELFEIMPERDVC----SWNTMLSGYAQNGCVDDARSVFDRMP-EKNDVSWNALL 195
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLD 166
S + N + F ++ ++ CL+ ++E ++ F
Sbjct: 196 SAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQF----FDSMNV 247
Query: 167 LDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRM 226
DV + ++ Y + ++EA ++F+E P++DV W AMV+GY Q +A E+F +M
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 227 SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD----SGVPVMNALIDMYGK 282
+ V ++ G+ + R+ + K +D V N +I Y +
Sbjct: 308 PER---------NEVSWNAMLAGYVQGERME---MAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 283 GKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTV 342
+ EA +F+ M ++D SW +++ + Q G+ LRLF +M G + + +FS+
Sbjct: 356 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA 415
Query: 343 LPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVF 402
L C+ + AL G+Q+HG +V G F+ NAL+ MY KCGS+ +A +F
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETG--------CFVGNALLLMYCKCGSIEEANDLF 467
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+M+ KD+ SWN MI GY G G+ AL F M LKPD+ T V VLSACSH+G +
Sbjct: 468 KEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVD 527
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+GR++ M YGV+P +HY C++D+LGRAG L +A+ L MP E + +W TLL A
Sbjct: 528 KGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
Query: 523 SRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP 582
SR+HGNT+LAE AA ++F +EP + G YVL+SN+Y + G++ +V +R MR + V+K P
Sbjct: 588 SRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVP 647
Query: 583 GCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTASGFE 642
G SWIE+++ HTF D HPE I+A L L R+++ G ++ D E
Sbjct: 648 GYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKE 707
Query: 643 KHRLYLEEVIA 653
+ Y E +A
Sbjct: 708 RMVRYHSERLA 718
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 126/508 (24%), Positives = 219/508 (43%), Gaps = 74/508 (14%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSITSL-INMYSKCCQMKYALFVFNNLSCEPNVFT 101
A QT +QK Q +L+ G DS + ++ I+ Y + + AL VF + +V +
Sbjct: 43 ATQTQIQKSQT--KPLLKCG--DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV-S 97
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
YN MISG+ N F+ M P++
Sbjct: 98 YNGMISGYLRNGEFELARKLFDEM------PER--------------------------- 124
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALE 221
D+ + ++ Y++ + + +A ++FE +P RDV WN M++GYAQ G A
Sbjct: 125 ------DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 222 VFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG-IVVKMGYDSGVPVMNALIDMY 280
VF RM ++ + + +LSA + +N ++ ++ K + + N L+ +
Sbjct: 179 VFDRMPEK----NDVSWNALLSA-----YVQNSKMEEACMLFKSRENWALVSWNCLLGGF 229
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR-----------MLS 329
K K + EA + F+ M +D+ SWN+I+T + Q G D +LFD M+S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 330 AGFQPDLVTFSTVL-PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI---DDVFMNNAL 385
Q +V + L + + GY+ + D+ +V N +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ Y +CG + +A+ +F KM K+D SW MI GY G EAL +F M + +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 446 VTFVGVLSACSHSGFLSQGREFL-PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
+F LS C+ L G++ L++ Y + + ++ M + G + EA +L
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN--ALLLMYCKCGSIEEANDLF 467
Query: 505 LAMPNEANPVVWRTLLAASRLHGNTDLA 532
M + + V W T++A HG ++A
Sbjct: 468 KEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++L CA L+ G+++H +++ G +L+ MY KC ++ A +F ++ +
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK- 155
++ ++N MI+G+ + F L FF M++ G+ PD T ++ C V + ++
Sbjct: 474 -DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Query: 156 IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM-----VNG 209
+ + G+ + + +V+ + +E+A + + +P D +W + V+G
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 210 YAQIGE 215
++ E
Sbjct: 593 NTELAE 598
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 83/214 (38%), Gaps = 19/214 (8%)
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+Q+H Y +NGL + C + N + T+ + K D+ W
Sbjct: 12 RAQQLH-YTSLNGLKRR--CNNAHGA-ANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEW 67
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N+ I Y G+ EAL +F M + V++ G++S +G R+ M
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLFDEMPE 123
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
R + + +I R L +A EL MP E + W T+L+ +G D
Sbjct: 124 R-----DLVSWNVMIKGYVRNRNLGKARELFEIMP-ERDVCSWNTMLSGYAQNGCVD--- 174
Query: 534 IAAQRVFQLEPGHCG-NYVLMSNIYVAGGKYEEV 566
A+ VF P ++ + + YV K EE
Sbjct: 175 -DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEA 207
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/554 (33%), Positives = 293/554 (52%), Gaps = 40/554 (7%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P T+ LI+ C A+ E KK+H + G + I + L+ Y KC + +A KV
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS------AL 245
F+E+P RD+ WN MVNGYA++G +A ++F M+++ + VTG + AL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 246 IMMGF--------------------------FKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
++ + G+ +HG +V+ G DS + ++L+DM
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
YGK C+ EA IF+ + EKD+ SW S++ + + LF ++ + +P+ TF
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ VL AC+ L G+Q+HGY+ G F +++L+DMYTKCG++ A+
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRVGFDPYS--------FASSSLVDMYTKCGNIESAK 374
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
V K D+ SW +I G +GQ EAL F + ++ KPD VTFV VLSAC+H+G
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G EF + ++ + T +HYTC++D+L R+G+ + + MP + + +W ++
Sbjct: 435 LVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L +GN DLAE AAQ +F++EP + YV M+NIY A GK+EE +R M++ V
Sbjct: 495 LGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDSTAS 639
K PG SW E+K H FI++D SHP I L L +++E G A +L D
Sbjct: 555 KRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDE 614
Query: 640 GFEKHRLYLEEVIA 653
E++ +Y E +A
Sbjct: 615 QKEENLVYHSEKLA 628
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 215/458 (46%), Gaps = 50/458 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
+Q+C+ L++G+++H ++ +G + + L+ MY+KC + A VF+ +
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 95 CEPNV--------------------------FTYNAMISGFYSNDFAFKGLDFFNHMRQL 128
C NV +++ AM++G+ D + L ++ M+++
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 129 -GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
P+ +T + V + K+IHG + + GLD D + S+L++ Y KC ++E
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
A +F+++ +DVV W +M++ Y + + + +F + + +T GVL+A
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + G+ VHG + ++G+D ++L+DMY K + A + + + D+ SW S+
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSL 391
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
+ Q G D L+ FD +L +G +PD VTF VL AC+H + G + I
Sbjct: 392 IGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHR 451
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG----YG-M 422
+ S D + L+D+ + G + V ++M K +LG YG +
Sbjct: 452 LSHTS-----DHY--TCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNI 504
Query: 423 DGQGKEALDMFSCMCEAKLKPDE-VTFVGVLSACSHSG 459
D + A ++F K++P+ VT+V + + + +G
Sbjct: 505 DLAEEAAQELF------KIEPENPVTYVTMANIYAAAG 536
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 321 LRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVF 380
LR ++L +P T+ ++ CS AL G+++H +I +G + +
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF--------VPGIV 121
Query: 381 MNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ N L+ MY KCGS+ DA+ VF +M +D+ SWN+M+ GY G +EA +F M E
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 203/585 (34%), Positives = 311/585 (53%), Gaps = 42/585 (7%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
LS T+ + + K ++ A +F+ + PN+ Y MI+G+ ND L F+ M
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIP-SPNLHLYTKMIAGYTRNDRLCDALKLFDRMS- 70
Query: 128 LGVLPDKYTFPCLIKCCCD-------------------------VMAVLEVKKIHGLVFK 162
+ D ++ +IK C D V L+ ++ L +
Sbjct: 71 ---VRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVE-LAQR 126
Query: 163 LGLDL---DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKA 219
L LD+ DV +A+V+ Y + +EE +++FEE+P+RDV+ W +M+ G G+ +A
Sbjct: 127 LFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEA 186
Query: 220 LEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
L VF++M + G+ + T VLSA F G VHG VVK+G + +LI
Sbjct: 187 LFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITF 246
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
Y + A +IF K++ W +++T + H LR+F M G P+ TF
Sbjct: 247 YANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTF 306
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
S L AC L AL G++IH + GL DVF+ N+L+ MYT+CG++ A
Sbjct: 307 SITLKACCGLEALDKGKEIHTMAIKLGLET--------DVFVGNSLVVMYTECGNVNSAV 358
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF +++KD+ SWN +I+G G G AL F+ M + P+E+TF G+LSACS SG
Sbjct: 359 AVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSG 418
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
L +GR F + V +HY C++D+LGR G+L+EA EL MP +AN ++W L
Sbjct: 419 MLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLAL 478
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L+A R+H N ++AE AA+ + LEP YVL+SNIY + G++ +V +R M+Q +
Sbjct: 479 LSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMKQGGLV 538
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PG SW+ L+ H F+S+DRSHP ++ IY +L L +L+E G
Sbjct: 539 KQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFG 583
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 2/270 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T +T L CA+ G ++H ++++ G SLI Y+ C ++++A +F
Sbjct: 201 TWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIF 260
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + NV + A+++ + N+ L F M ++G LP++ TF +K CC + A+
Sbjct: 261 NE-TLTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEAL 319
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K+IH + KLGL+ DV++G++LV Y +C + A+ VF + +D+V WN+++ G
Sbjct: 320 DKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGS 379
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
AQ G AL F +M + G+ + T TG+LSA G GR + + +
Sbjct: 380 AQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLR 439
Query: 271 PVMNA-LIDMYGKGKCVGEALEIFEMMEEK 299
P A ++D+ G+ + EA E+ M K
Sbjct: 440 PQHYACMVDILGRCGKLDEAEELVRYMPVK 469
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C L KG+EIH+ ++ G+ SL+ MY++C + A+ VF N++ E
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNIN-EK 367
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ ++N++I G + F L FFN M + GV P++ TF L+ C +L+ +
Sbjct: 368 DIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFF 427
Query: 158 GLVFKLGLD-LDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGE 215
+ + + L + +V+ +C ++EA ++ +P++ + ++W A+++
Sbjct: 428 EYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSA----CR 483
Query: 216 FHKALEVFRRMSK 228
H LEV R +K
Sbjct: 484 VHSNLEVAERAAK 496
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 183/618 (29%), Positives = 328/618 (53%), Gaps = 43/618 (6%)
Query: 42 CAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN-NLSCEPNVF 100
C + +L +G++IH++++ GI +P+ ++ LIN Y+ + A V + S +P
Sbjct: 102 CTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDP--L 159
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
+N +IS + N + + M GV+PD YT+P ++K C +++ +H +
Sbjct: 160 HWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAI 219
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
+ + +++ +ALV Y + +E A ++F+ +P RD V WN M++ YA G + +A
Sbjct: 220 QESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAF 279
Query: 221 EVFRRMSKEGI------W-------------------MSRFTVTGVLSALIM-------- 247
+F M + GI W S+ L ++ M
Sbjct: 280 RLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACS 339
Query: 248 -MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+G K G+ +HG V+ +D V N LI MY + + + A +F ++EK + +WN+
Sbjct: 340 HIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNA 399
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
+++ + L ML G +P+ VT +++LP C+ +A L HG++ H Y+V
Sbjct: 400 MLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKRE 459
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
G + + N+L++MY++ G + +A+ VF +S+KD ++ MI+GYG+ G G
Sbjct: 460 EQFKGY------LLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDG 513
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC 486
+ AL +F+ M +KPD VT V VL ACSHSG ++QG+ M YG+ P +EHY+C
Sbjct: 514 ETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSC 573
Query: 487 VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH 546
++D+ GRAG L++A E+ M + +W TL+ A ++HGNT + E AA ++ +++P H
Sbjct: 574 MVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDH 633
Query: 547 CGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEA 606
G Y+L++N+Y A + ++ + R MR ++ PGC+W+++ L F++ D S+P +
Sbjct: 634 SGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRS 693
Query: 607 KSIYAELHSLTARLREHG 624
I + L +++ G
Sbjct: 694 CEISPMMKRLNILMKDAG 711
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 209/444 (47%), Gaps = 46/444 (10%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
L+ C ++ ++ + K+IH + LG+ + + S L+N Y + +A V E D
Sbjct: 98 LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFD 157
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+ WN +++ Y + F A+ V+RRM +G+ +T VL A + + +G VH
Sbjct: 158 PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHK 217
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ + + V NAL+ MYG+ + A E+F++M +D SWN++++ + G D
Sbjct: 218 AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDE 277
Query: 320 TLRLFDRMLSAGFQPDLVTFSTV----------------------------------LPA 345
RLF M AG + +++ ++T+ L A
Sbjct: 278 AFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNA 337
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CSH+ A+ G++IHG+ V +C D+ D + N L+ MY++C + A ++F K+
Sbjct: 338 CSHIGAVKLGKEIHGHAV-------RTCFDVFD-NVKNTLITMYSRCRDLNHAYLLFRKI 389
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
+K + +WN M+ G+ + +E + M ++P+ VT +L C+ L G+
Sbjct: 390 DEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGK 449
Query: 466 EFLPLMESRYGVVPT-IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
EF M R + + +++M R+G++ EA ++ ++ + + V + +++
Sbjct: 450 EFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSL-SRKDEVTYTSMIMGYG 508
Query: 525 LHGN--TDLAEIAAQRVFQLEPGH 546
+ G+ T L A R ++P H
Sbjct: 509 VSGDGETALKLFAEMRRLNIKPDH 532
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 186/421 (44%), Gaps = 55/421 (13%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + G +H + + I S +L+ MY + +++ A +F+ + +
Sbjct: 200 LKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDD 259
Query: 99 VFTYNAMISGFYSN---DFAFK--------------------------------GLDFFN 123
V ++N MIS + S D AF+ L F+
Sbjct: 260 V-SWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFS 318
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
MR + L D + C + AV K+IHG + D+ + + L+ Y +C+
Sbjct: 319 QMRAVIQL-DSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCR 377
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ A +F ++ + ++ WNAM++G+A + + + R M +EG+ + T+ +L
Sbjct: 378 DLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILP 437
Query: 244 ALIMMGFFKNGRVVHGIVVKM--GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
+ ++G+ H +VK + + + N+L++MY + V EA ++F+ + KD
Sbjct: 438 LCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDE 497
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGY 361
++ S++ + G+ + L+LF M +PD VT VL ACSH + G+ +
Sbjct: 498 VTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRK 557
Query: 362 IV----VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIM 416
++ ++ ++ SC ++D++ + G + A+ V T MS K A W +
Sbjct: 558 MIEVYGIDPRVEHYSC-----------MVDLFGRAGLLDKAKEVITGMSCKPTSAIWATL 606
Query: 417 I 417
I
Sbjct: 607 I 607
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
+ L C+H ++ G+EIH + +RT +LI MYS+C + +A +F +
Sbjct: 332 VVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKID- 390
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK 155
E + T+NAM+SGF D + + M + GV P+ T ++ C + + K+
Sbjct: 391 EKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKE 450
Query: 156 IHGLVFKLGLDLDVY--IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
H + K Y + ++LV Y + + EA KVF+ L +D V + +M+ GY
Sbjct: 451 FHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVS 510
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYDSGVPV 272
G+ AL++F M + I T+ VL A G G+V+ ++++ G D V
Sbjct: 511 GDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEH 570
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFS-WNSIMTVHEQCGN 316
+ ++D++G+ + +A E+ M K + W +++ + GN
Sbjct: 571 YSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGN 615
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLR-----TGIIDSPLSITSLINMYSKCCQMKYALF 88
T + L LCA NLQ G+E H YM++ G + L SL+ MYS+ ++ A
Sbjct: 431 TIASILPLCARIANLQHGKEFHCYMVKREEQFKGYL---LLWNSLVEMYSRSGKVLEARK 487
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF++LS + V TY +MI G+ + L F MR+L + PD T ++ C
Sbjct: 488 VFDSLSRKDEV-TYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSG 546
Query: 149 AVLEVKKI-HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
V + + + ++ G+D V S +V+ + + +++A +V + + +W +
Sbjct: 547 LVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATL 606
Query: 207 -----VNGYAQIGEF 216
++G IGE+
Sbjct: 607 IGACKIHGNTVIGEW 621
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/480 (37%), Positives = 267/480 (55%), Gaps = 11/480 (2%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D Y+ I V ++ + H L KL L D ++ +AL+N Y C + A V
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 151
Query: 193 EELP--LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
+ P DVV WN ++ GY + G +KAL+ F +M+KE + + T+ VL A G
Sbjct: 152 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 211
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
K G + H +VV G++ + ++L+ MY K V EA +F M E+++ W S++
Sbjct: 212 MKVGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAG 271
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
Q G + LF M AG + D T +TV+ +C + AL GR +H Y +GL K
Sbjct: 272 CTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKE 331
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
S K N+L+DMY+KCG + A +F ++K+DV +W +MI+G+ M+G EAL
Sbjct: 332 LSVK--------NSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEAL 383
Query: 431 DMFSCM-CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVID 489
D+F+ M E K+ P+EV F+GVL+ACSH G + QG M Y +VP IEHY C++D
Sbjct: 384 DLFAQMEGEDKVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVD 443
Query: 490 MLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+LGRA L EA + MP + VVWR+LL A R G LAE AA+R+ QLEP CG
Sbjct: 444 LLGRAKLLAEAEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGG 503
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSI 609
+VL+SN+Y ++ +V ++R M K PGCS+IE+ +H F + D SH E ++I
Sbjct: 504 HVLLSNVYATTLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAGDESHFETEAI 563
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS-CE 96
++ A +L G + H+ L+ + + +LINMYS C A V ++
Sbjct: 99 AISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVLDSAPRWA 158
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V ++N +I+G+ K L F+ M + V D+ T ++ C A+
Sbjct: 159 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 218
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H LV G +++ YIGS+LV+ Y KC +EEA +VF +P R+VV W +M+ G Q G F
Sbjct: 219 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 278
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+A+++FR M G+ T+ V+S+ MG GR +H G + V N+L
Sbjct: 279 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELSVKNSL 338
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPD 335
IDMY K V +A +IF + ++D+F+W ++ G L LF +M P+
Sbjct: 339 IDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPN 398
Query: 336 LVTFSTVLPACSH 348
V F VL ACSH
Sbjct: 399 EVIFLGVLTACSH 411
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 328/600 (54%), Gaps = 23/600 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F TC L C+ G ++HS +L+ G+ +LI MYS+CC++ A V
Sbjct: 174 FDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRV 233
Query: 90 FNNLSCEPNVFTYNAMISGF-YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
F+ + ++ ++NAM+SG+ + + + F M + G+ D +F I C
Sbjct: 234 FDEMR-NKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGK 292
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
++IH L K+G D V + + L++TY KC+ +E+A VFE + R+VV W M++
Sbjct: 293 EFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS 352
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
I E A +F M ++G++ + T G++ A+ M + G+++HG+ VK + S
Sbjct: 353 ----ISE-EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLS 407
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ V N+LI MY K + + +++++FE + ++I SWNS+++ + Q G L+ F L
Sbjct: 408 ELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSAL 467
Query: 329 SAGFQPDLVTFSTVLP--ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
+P+ TF +VL A + ++ HG++ H +I+ GL N +++AL+
Sbjct: 468 MES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNP--------IVSSALL 518
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY K GS+ ++ VF++ K+ +W +I + G + +++F M +KPD +
Sbjct: 519 DMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSI 578
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
TF+ V++AC G + G + M + + P+ EHY+ ++DMLGRAG+L EA E
Sbjct: 579 TFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQ 638
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
+P A V ++LL A R+HGN D+A+ A + ++EP G+YVLMSN+Y G++E+V
Sbjct: 639 IPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKV 698
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDG-----LHTFISSDRSHPEAKSIYAELHSLTARLR 621
IR MR++ VRK G SW+++ D LH F S D+ HP+++ IY +L ++
Sbjct: 699 AKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAETLGLEMK 758
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 266/510 (52%), Gaps = 49/510 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T L+ C + L G +IH++ + +G I SL+NMY K AL VF NL
Sbjct: 82 TVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENL 139
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ P++ ++N ++SGF +D A L+F M GV D T ++ C D +
Sbjct: 140 N-NPDIVSWNTVLSGFQRSDDA---LNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFG 195
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++H + K GLD +V++G+AL+ Y +C + EA +VF+E+ +D+V WNAM++GYAQ
Sbjct: 196 FQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQE 255
Query: 214 GEFH-KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G +A+ VF M KEG+ + + TG +SA F+ GR +H + VK+GYD+ V V
Sbjct: 256 GNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKV 315
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N LI Y K + + +A +FE + ++++ SW +++++ E+ D T LF+ M G
Sbjct: 316 CNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE----DAT-SLFNEMRRDGV 370
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
P+ VTF ++ A + + G+ IHG V + ++ ++N+L+ MY K
Sbjct: 371 YPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSF--------LSELNVSNSLITMYAKF 422
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF-SCMCEAKLKPDEVTFVGV 451
SM D+ VF +++ +++ SWN +I GY +G +EAL F S + E+ +P+E TF V
Sbjct: 423 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES--RPNEFTFGSV 480
Query: 452 LSACS-------------HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
LS+ + HS L G P++ S ++DM + G +
Sbjct: 481 LSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSS------------ALLDMYAKRGSIC 528
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGN 528
E+ + P + N V W +++A HG+
Sbjct: 529 ESLGVFSETPLK-NEVAWTAIISAHARHGD 557
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%)
Query: 218 KALEVFRRMSKEGIW--MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+AL++F++ + G + + TV VL A G K G +H + G+ S V V N+
Sbjct: 61 EALDLFKKQLQWGFVGNIDQVTVAIVLKACC--GDSKLGCQIHAFAISSGFISHVTVPNS 118
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
L++MY K AL +FE + DI SWN++++ ++ D L RM G D
Sbjct: 119 LMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFTGVAFD 175
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
VT +TVL CS + G Q+H I+ GL C +VF+ NAL+ MY++C +
Sbjct: 176 AVTCTTVLAFCSDHEGFIFGFQLHSRILKCGL----DC----EVFVGNALITMYSRCCRL 227
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQ-GKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+A+ VF +M KD+ SWN M+ GY +G G EA+ +F M + +K D V+F G +SA
Sbjct: 228 VEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISA 287
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C H GR+ L + G ++ +I + + +A +L + N V
Sbjct: 288 CGHGKEFELGRQIHSL-AVKIGYDTHVKVCNVLISTYSKCEDIEDA-KLVFESIIDRNVV 345
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVF 540
W T+++ S + E+ V+
Sbjct: 346 SWTTMISISEEDATSLFNEMRRDGVY 371
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 290/525 (55%), Gaps = 41/525 (7%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
P + L+K C A+ E K++H + G + +YI + L++ Y KC + +A KV
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKA-------------------------------L 220
F+E+ RD+ WN M++GY + G F KA L
Sbjct: 176 FDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEAL 235
Query: 221 EVFRRMSKEGIWMS-RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDM 279
E++R M K S + T++ L+A + G+ +HG +++MG DS V +L+DM
Sbjct: 236 ELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDM 295
Query: 280 YGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
YGK + EA IF+ MEE+D+ SW +++ + + G + LF ++++ P+ TF
Sbjct: 296 YGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTF 355
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+ VL AC+ LAA G+QIH Y+V G S +AL+ MY+KCG + +A+
Sbjct: 356 AGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAA--------SALVHMYSKCGDIENAK 407
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF + + D+ SW +++GY GQ +AL F + ++ KPD + F+GVLSAC+H+G
Sbjct: 408 SVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAG 467
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G E+ ++ ++G+ TI+HY C+ID+L RAGQ EA + MP + + +W L
Sbjct: 468 LVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAAL 527
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L R+HGN +LA+ AA+ +F++EP + YV ++NIY + G E +IR TM + +
Sbjct: 528 LGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIV 587
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
K PG SWIE++ +H F D SHP++K I L L+ R++E G
Sbjct: 588 KKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVG 632
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 228/478 (47%), Gaps = 54/478 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C Q L++G+++H+++ +G I +S L++MY+KC + A VF+ + +
Sbjct: 126 LKFCLKQRALKEGKQVHAHIKTSGSIGLYIS-NRLLDMYAKCGSLVDAEKVFDEM-VHRD 183
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC-------------- 144
+ ++N MISG+ K + F+ M D +++ +I C
Sbjct: 184 LCSWNIMISGYVKGGNFEKARNLFDKMPN----RDNFSWTAIISGCVQHNRPEEALELYR 239
Query: 145 ------------CDVMAVLEV----------KKIHGLVFKLGLDLDVYIGSALVNTYLKC 182
C + + L KKIHG + ++GLD D + +L++ Y KC
Sbjct: 240 LMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKC 299
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+EEA +F+++ RDVV W M++ Y + G + +FR + I + FT GVL
Sbjct: 300 GSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVL 359
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+A + G+ +H +V++G+DS +AL+ MY K + A +FE++ + D+F
Sbjct: 360 NACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLF 419
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
SW S++ + Q G HD L F+ +L +G +PD + F VL AC+H + G + I
Sbjct: 420 SWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSI 479
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYG 421
K+G + ID ++D+ + G +A+ + +M K D W ++ G
Sbjct: 480 K----EKHGLTRTIDHY---ACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCR 532
Query: 422 MDGQGKEALDMFSCMCEAKLKPDE-VTFVGVLSACSHSGFLSQGREFLPLMESRYGVV 478
+ G + A + E ++P+ T+V + + + +G ++ M+SR G+V
Sbjct: 533 IHGNLELAKRAAKSLFE--IEPENPATYVTLANIYASAGMRAEEANIRETMDSR-GIV 587
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 21/271 (7%)
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
CG LR ++L +P + T+L C AL G+Q+H +I +G
Sbjct: 99 CGQ--SRLREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSI----- 151
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
++++N L+DMY KCGS+ DA+ VF +M +D+ SWNIMI GY G ++A ++F
Sbjct: 152 ----GLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLF 207
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESR-YGVVP--TIEHYTCVIDM 490
M D ++ ++S C + E LM+ Y TI
Sbjct: 208 DKMPNR----DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAA 263
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
+ + + + M +++ VVW +LL ++G E A ++E ++
Sbjct: 264 IPSLHMGKKIHGHIMRMGLDSDEVVWCSLLD---MYGKCGSIEEARYIFDKMEERDVVSW 320
Query: 551 VLMSNIYVAGGKYEEVLDIRHTMRQQNVRKN 581
M + Y+ G+ EE + + N+ N
Sbjct: 321 TTMIHTYLKNGRREEGFALFRHLMNSNIMPN 351
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 313/559 (55%), Gaps = 12/559 (2%)
Query: 65 DSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
+S L+++ S++NMY KC ++ A +F ++ C ++ ++N+++S + + L
Sbjct: 179 ESDLALSNSMVNMYGKCGRIADARRLFQSIDCR-DIVSWNSLLSAYSKIGATEEILQLLQ 237
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKC 182
M+ + PDK TF C + L + K +HGL+ K GL++D ++ SALV YL+C
Sbjct: 238 AMKIEDIKPDKQTF-CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+ ++ A KVF+ +DVV+W AM++G Q KAL VF +M + + S T+ L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+A +G G +HG V++ G +P N+L+ MY K + ++ IF M EKD+
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
SWN+I+ H + G + F+ M + +PD +T +++L AC AL G+ IH ++
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+ + L I + AL+DMY KCG++ +AQ F M ++D+ +W+ +I+GYG
Sbjct: 477 LRSSL--------IPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+G+G+ AL +S ++P+ V F+ VLSACSH G +S+G M + + P +E
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLE 588
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
H CV+D+L RAG+++EAY M E + VV LL A R++G +L ++ A+ +F+L
Sbjct: 589 HRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFEL 648
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P GN+V ++N Y + +++ V MR ++K PG S IE+ TF +S S
Sbjct: 649 KPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNS 708
Query: 603 HPEAKSIYAELHSLTARLR 621
HP+ + I + +L+ +R
Sbjct: 709 HPKIEKIILTVKALSKNIR 727
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 209/427 (48%), Gaps = 13/427 (3%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++N+++S + L + M++ D YTFP L K C ++ +H V
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
GL D YIGS+L++ Y K + KVF+ + R+VV W ++ Y++ G+ A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F++M + GI + T +LS L + +H +++ G++S + + N++++MY
Sbjct: 136 SMFKQMRESGIQPTSVT---LLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
GK + +A +F+ ++ +DI SWNS+++ + + G + L+L M +PD TF
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+ L A + L G+ +HG ++ +GL +ID + +AL+ +Y +C + A
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGL-------NIDQ-HVESALVVLYLRCRCLDPAYK 304
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF ++KDV W MI G + +AL +F M E+ +KP T L+AC+ G
Sbjct: 305 VFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGC 364
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
G + R G++ I ++ M + +L ++ + M E + V W ++
Sbjct: 365 CDIGASIHGYVL-RQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMV-EKDLVSWNAIV 422
Query: 521 AASRLHG 527
A +G
Sbjct: 423 AGHAKNG 429
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 13/332 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++L A + +L+ G+ +H ML+ G+ ID + ++L+ +Y +C + A VF +
Sbjct: 250 TFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVE-SALVVLYLRCRCLDPAYKVFKS 308
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF-----PCLIKCCCDV 147
+ E +V + AMISG ND A K L F M + V P T C CCD+
Sbjct: 309 -TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A IHG V + G+ LD+ ++LV Y KC ++++ +F ++ +D+V WNA+V
Sbjct: 368 GA-----SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+A+ G K + F M K + TVT +L A G G+ +H V++
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ AL+DMY K + A + F+ M ++D+ +W++++ + G + LR +
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
L G +P+ V F +VL ACSH + G I+
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIY 574
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+ AT + L CA G IH Y+LR GI+ + SL+ MY+KC +++ + +F
Sbjct: 348 STATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIF 407
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + E ++ ++NA+++G N + KG+ FFN MR+ + PD T L++ C A+
Sbjct: 408 NKM-VEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGAL 466
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K IH V + L + +ALV+ Y KC +E A K F+ + RD+V W+ ++ GY
Sbjct: 467 CQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGY 526
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSG 269
G+ AL + G+ + VLSA G G ++ + K
Sbjct: 527 GFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPN 586
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMM 296
+ ++D+ + V EA ++MM
Sbjct: 587 LEHRACVVDLLSRAGKVDEAYSFYKMM 613
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 322/591 (54%), Gaps = 17/591 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L C + +L G+ +H ++ G+ I LI+MYSKC ++ A+ +F+
Sbjct: 150 TYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 209
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E + ++N++ISG+ A + L+ M + G+ Y ++K CC + +
Sbjct: 210 D-ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 154 KK---IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+K IH KLG++ D+ + +AL++ Y K ++EA+K+F +P ++VV +NAM++G+
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 211 AQIGEF-----HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
Q+ E +A ++F M + G+ S T + VL A + GR +H ++ K
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ S + +ALI++Y + ++ F ++DI SW S++ H Q + LF
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
++ S+ +P+ T S ++ AC+ AAL G QI GY + +G+ S K +
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVK--------TSS 500
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G+M A VF ++ DVA+++ MI G EAL++F M +KP++
Sbjct: 501 ISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQ 560
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
F+GVL AC H G ++QG ++ M++ Y + P +H+TC++D+LGR G+L++A L L
Sbjct: 561 QAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLIL 620
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+ + +PV WR LL++ R++ ++ + + A+R+ +LEP G+YVL+ NIY G
Sbjct: 621 SSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSS 680
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
++R MR + V+K P SWI + + H+F +D SHP ++ IY L ++
Sbjct: 681 AEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 259/506 (51%), Gaps = 27/506 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
Q A ++ G+ H +M+++ + + +L+NMY KC ++ +A +F+ + E N
Sbjct: 54 FQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP-ERN 112
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N++ISG+ F + ++ F R+ + DK+T+ + C + + + +HG
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
LV GL V++ + L++ Y KC +++A+ +F+ RD V WN++++GY ++G +
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIM---MGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
L + +M ++G+ ++ + + VL A + GF + G +H K+G + + V A
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN-----HDGTLRLFDRMLSA 330
L+DMY K + EA+++F +M K++ ++N++++ Q +LF M
Sbjct: 293 LLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRR 352
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P TFS VL ACS L +GRQIH I N D F+ +AL+++Y
Sbjct: 353 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS--------DEFIGSALIELYA 404
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
GS D F SK+D+ASW MI + + Q + A D+F + + ++P+E T
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSL 464
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALA 506
++SAC+ LS G + Y + I+ +T V I M ++G + A ++ +
Sbjct: 465 MMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE 519
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLA 532
+ N + + ++++ HG+ + A
Sbjct: 520 VQN-PDVATYSAMISSLAQHGSANEA 544
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 175/347 (50%), Gaps = 16/347 (4%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D + L + +V+ K HG + K L+ +Y+ + L+N Y KC+ + A ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+ +P R+++ +N++++GY Q+G + +A+E+F + + + +FT G L
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G ++HG+VV G V ++N LIDMY K + +A+ +F+ +E+D SWNS+++ +
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS---HLAALMHGRQIHGYIVVNGLAK 369
+ G + L L +M G +VL AC + + G IH Y G+
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM-----DG 424
D+ + AL+DMY K GS+++A +F+ M K+V ++N MI G+ D
Sbjct: 286 --------DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
EA +F M L+P TF VL ACS + L GR+ L+
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALI 384
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 179/367 (48%), Gaps = 30/367 (8%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G++ HG ++K + + ++N L++MY K + +G A ++F+ M E++I S+NS+++ + Q
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ + LF A + D T++ L C L G +HG +VVNGL++
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ--- 182
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
VF+ N L+DMY+KCG + A +F + ++D SWN +I GY G +E L++
Sbjct: 183 -----VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 434 SCMCEAKLKPDEVTFVGVLSACS---HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+ M L VL AC + GF+ +G + ++ G+ I T ++DM
Sbjct: 238 AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMA-IHCYTAKLGMEFDIVVRTALLDM 296
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAA-SRLHGNTDLAEIAAQRVFQ------LE 543
+ G L EA +L MP++ N V + +++ ++ TD A A ++F LE
Sbjct: 297 YAKNGSLKEAIKLFSLMPSK-NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Query: 544 PGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNP--GCSWIEL-------KDGLH 594
P V++ A E I + + N + + G + IEL +DG+
Sbjct: 356 PSPSTFSVVLKAC-SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQ 414
Query: 595 TFISSDR 601
F S+ +
Sbjct: 415 CFASTSK 421
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/620 (32%), Positives = 326/620 (52%), Gaps = 46/620 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYML-RTGIIDSPLSITS-LINMYSKCCQMKYAL 87
+L T + CA + LQ G +H Y+L + I + + +T+ +INMY KC + YA
Sbjct: 88 LSLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYAR 147
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN----HMRQLGVLPDKYTFPCLIKC 143
+VF+ +S N+ ++ A+ISG + + F+ H R P+++ F L+
Sbjct: 148 YVFDQMS-HRNIVSWTALISGHAQSGLVRECFSLFSGLLAHFR-----PNEFAFASLLSA 201
Query: 144 C--CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK--------CQFMEEALKVFE 193
C D+ ++V H + K+ LD +VY+ ++L+ Y K Q ++A +F+
Sbjct: 202 CEEHDIKCGMQV---HAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFK 258
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSAL-------I 246
+ R++V WN+M+ + G KA+ +F M GI R T+ V S+L +
Sbjct: 259 SMEFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDV 318
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVGEALEIF-EMMEEKDIFSW 304
+ + + +H + +K G S + V+ ALI Y G + + IF + + DI SW
Sbjct: 319 INTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSW 378
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
++++V + + + LF ++ + PD TFS L AC++ H IH ++
Sbjct: 379 TALISVFAE-RDPEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIK 437
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G +D + NALM Y +CGS+ ++ VF +M D+ SWN M+ Y + G
Sbjct: 438 KGFQ--------EDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHG 489
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
Q K+AL++F M + PD TFV +LSACSH G + +G + M +GVVP ++HY
Sbjct: 490 QAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHY 546
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEP 544
+C++D+ GRAG++ EA EL MP + + V+W +LL + R HG T LA++AA + +LEP
Sbjct: 547 SCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEP 606
Query: 545 GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHP 604
+ YV MSNIY +GG + + IR+ M VRK PG SW+E+ +H F S + HP
Sbjct: 607 NNSLGYVQMSNIYSSGGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHP 666
Query: 605 EAKSIYAELHSLTARLREHG 624
+I + L + +L+E G
Sbjct: 667 NRGAILSRLEIVIGQLKEMG 686
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 322/591 (54%), Gaps = 17/591 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T +L C + +L G+ +H ++ G+ I LI+MYSKC ++ A+ +F+
Sbjct: 151 TYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRC 210
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ E + ++N++ISG+ A + L+ M + G+ Y ++K CC + +
Sbjct: 211 N-ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLM 269
Query: 154 KK---IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+K IH KLG++ D+ + +AL++ Y K ++EA+K+F +P ++VV +NAM++G+
Sbjct: 270 EKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGF 329
Query: 211 AQIGEF-----HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
Q+ + +A ++F M + G+ S T + VL A + GR +H ++ K
Sbjct: 330 LQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 389
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ S + +ALI++Y + ++ F ++DI SW SI+ H Q + LF
Sbjct: 390 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFR 449
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
++ S+ +P+ T S ++ AC+ AAL G QI GY + +G+ S K +
Sbjct: 450 QLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVK--------TSS 501
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G+M A VF ++ DVA+++ MI G +AL++F M +KP++
Sbjct: 502 ISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQ 561
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
F+GVL AC H G ++ G + M++ YG+ P +H+TC+ D+LGR G+L++A L L
Sbjct: 562 QAFLGVLIACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLIL 621
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+ + +PV+WR LL++ R++ ++ + + A+R+ +LEP G+YVL+ NIY G
Sbjct: 622 SSGFQDHPVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSS 681
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
++R MR + V+K P SWI L + H+F +D SHP ++ IY L ++
Sbjct: 682 AEEVRELMRDRGVKKEPALSWIVLGNQTHSFAVADWSHPSSQMIYTMLDTM 732
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 255/503 (50%), Gaps = 27/503 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
Q A +L G+ H +M+++ + + +L+NMY KC ++ +A +F+ + E N
Sbjct: 55 FQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP-ERN 113
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N++ISG+ F + ++ F R + DK+T+ + C + + K +HG
Sbjct: 114 IISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHG 173
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
LV GL V++ + L++ Y KC +++A+ +F+ RD V WN++++GY ++G +
Sbjct: 174 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEE 233
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIM---MGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
L + +M + G+ ++ + + VL A + G + G +H K+G + + V A
Sbjct: 234 PLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTA 293
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN-----HDGTLRLFDRMLSA 330
L+DMY K + EA+++F +M K++ ++N++++ Q + +LF M
Sbjct: 294 LLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRR 353
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +P TFS VL ACS L +GRQIH I N D F+ +AL+++Y
Sbjct: 354 GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ--------SDEFIGSALIELYA 405
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
GS D F SK+D+ASW +I + + Q + A D+F + + ++P+E T
Sbjct: 406 LMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSL 465
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALA 506
++SAC+ LS G + Y + I+ YT V I M ++G + A ++ +
Sbjct: 466 MMSACADFAALSSGEQI-----QGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIE 520
Query: 507 MPNEANPVVWRTLLAASRLHGNT 529
+ N + + ++++ HG+
Sbjct: 521 VQN-PDVATYSAMISSLAQHGSA 542
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 152/292 (52%), Gaps = 15/292 (5%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G++ HG +VK + + ++N L++MY K + +G A ++F+ M E++I S+NS+++ + Q
Sbjct: 67 GKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 126
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ + LF + D T++ L C L G+ +HG +VVNGL++
Sbjct: 127 VGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQ--- 183
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
VF+ N L+DMY+KCG + A +F + +++D SWN +I GY G +E L++
Sbjct: 184 -----VFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLL 238
Query: 434 SCMCEAKLKPDEVTFVGVLSACS---HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+ M A LK VL AC + G + +G + ++ G+ I T ++DM
Sbjct: 239 AKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMA-IHCYAAKLGMEFDIVVRTALLDM 297
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
+ G L EA +L MP + N V + ++ S D+ + A+ F+L
Sbjct: 298 YAKNGSLKEAIKLFSLMPAK-NVVTYNAMI--SGFLQMDDITDEASSEAFKL 346
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/648 (30%), Positives = 322/648 (49%), Gaps = 96/648 (14%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ L G ++H+ ++TG+ + ++L++MY KC + AL F + E N
Sbjct: 156 LKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERN 214
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
++ + I+G N+ +GL+ F M++LG+ + ++ + C + + +++H
Sbjct: 215 WVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D +G+A+V+ Y K + +A + F LP V NAM+ +G F
Sbjct: 275 HAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM-----VGLF-- 327
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
M + I +++GV SA + G+ VH + +K +++D
Sbjct: 328 -------MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK-----------SVLD 369
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ------------------------- 313
+YGK K + EA IF+ M++KD SWN+I+ EQ
Sbjct: 370 LYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTV 429
Query: 314 ------CGNHDGTLRLFDR-------------------------------MLSAGFQPDL 336
CG D +L DR ML G +PD
Sbjct: 430 VDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDH 489
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
TF+TVL C++LA + G+QIHG I+ + +DD ++++ L+DMY KCG M
Sbjct: 490 FTFATVLDTCANLATIELGKQIHGQIIKQEM--------LDDEYISSTLVDMYAKCGDMP 541
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
D+ +VF K+ K+D SWN MI GY + G G EAL MF M + + P+ TFV VL ACS
Sbjct: 542 DSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACS 601
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G G + LM + Y + P +EH+ C++D+LGR+ EA + +MP +A+ V+W
Sbjct: 602 HVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIW 661
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLL+ ++ + ++AE+AA V L+P Y+L+SN+Y GK+ +V R ++Q
Sbjct: 662 KTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQG 721
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
++K PGCSWIE + +H F+ D++HP + +Y L+ L ++ G
Sbjct: 722 RLKKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSG 769
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 233/509 (45%), Gaps = 72/509 (14%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S +++ YS + A+ +F+ + +P+V ++NA++SG+ + +D F M +
Sbjct: 84 VSWNTMLTAYSHAGDISTAVALFDGMP-DPDVVSWNALVSGYCQRGMFQESVDLFVEMAR 142
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
GV PD+ TF L+K C + + ++H L K GL++DV GSALV+ Y KC+ +++
Sbjct: 143 RGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDD 202
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL F +P R+ V W + + G Q ++ + LE+F M + G+ +S+ + +
Sbjct: 203 ALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAA 262
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
M GR +H +K + S V A++D+Y K + +A F + + + N++
Sbjct: 263 MSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAM 322
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH-------- 359
M + LF M+ + + D+V+ S V AC+ G+Q+H
Sbjct: 323 M------------VGLF--MIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVL 368
Query: 360 -----------GYIVVNG---------------LAKNGSCKDID---------DVFMNNA 384
Y++ G L +NG D D F+ +
Sbjct: 369 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVAST 428
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
++DMY KCG + +AQ + ++ + V SWN ++ G+ ++ + + A FS M + LKPD
Sbjct: 429 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPD 488
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY------TCVIDMLGRAGQLN 498
TF VL C++ + G++ +G + E + ++DM + G +
Sbjct: 489 HFTFATVLDTCANLATIELGKQI-------HGQIIKQEMLDDEYISSTLVDMYAKCGDMP 541
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHG 527
++ L + + V W ++ LHG
Sbjct: 542 DSL-LVFEKVEKRDFVSWNAMICGYALHG 569
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 35/363 (9%)
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D + ++ Y + A+ +F+ +P DVV WNA+V+GY Q G F +++++F M+
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
+ G+ R T +L + + G VH + VK G + V +AL+DMYGK + +
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+AL F M E++ SW S + Q + L LF M G ++++ +C+
Sbjct: 202 DALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
++ L GRQ+H + + N + D + A++D+Y K S+ DA+ F +
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSS--------DRVVGTAIVDVYAKANSLTDARRAFFGLPN 313
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
V + N M++G +F M + ++ D V+ GV SAC+ + G++
Sbjct: 314 HTVETSNAMMVG------------LF--MIRSSIRFDVVSLSGVFSACAETKGYFPGQQV 359
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
L V+D+ G+ L EAY + M + + V W ++AA +G
Sbjct: 360 HCLA------------IKSVLDLYGKCKALMEAYLIFQGM-KQKDSVSWNAIIAALEQNG 406
Query: 528 NTD 530
+ D
Sbjct: 407 HYD 409
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 42/358 (11%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
++ + CA + L G+++H++ ++ + T+++++Y+K + A F L
Sbjct: 255 SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGL--- 311
Query: 97 PN--VFTYNAMISGFY----SNDFAFKGLD--FFNHMRQLGVLPDKYTFPCLIKCCCD-- 146
PN V T NAM+ G + S F L F G P + IK D
Sbjct: 312 PNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSVLDLY 371
Query: 147 --------------------------VMAVLEVKKIHG---LVFKLGLDLDVYIGSALVN 177
++A LE + L F L D ++ S +V+
Sbjct: 372 GKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVD 431
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y KC ++EA K+ + + + VV WNA+++G++ E A + F M G+ FT
Sbjct: 432 MYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFT 491
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
VL + + G+ +HG ++K + + L+DMY K + ++L +FE +E
Sbjct: 492 FATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 551
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHG 355
++D SWN+++ + G LR+F+RM P+ TF VL ACSH+ G
Sbjct: 552 KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDG 609
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 42/281 (14%)
Query: 261 VVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
+V G+ V N L+ MY + A +F+ M +D SWN+++T + G+
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 321 LRLFD-------------------------------RMLSAGFQPDLVTFSTVLPACSHL 349
+ LFD M G PD TF+ +L +CS L
Sbjct: 103 VALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
L G Q+H V GL DV +AL+DMY KC S+ DA F M +++
Sbjct: 163 EELSLGVQVHALAVKTGLEI--------DVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
SW I G + Q L++F M L + ++ +C+ L+ GR+
Sbjct: 215 WVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 470 -LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
+++++ + T ++D+ +A L +A +PN
Sbjct: 275 HAIKNKFSSDRVVG--TAIVDVYAKANSLTDARRAFFGLPN 313
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 93/181 (51%), Gaps = 6/181 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FT AT L CA+ ++ G++IH +++ ++D ++L++MY+KC M +L V
Sbjct: 490 FTFATV---LDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLV 546
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
F + + + ++NAMI G+ + + L F M++ V+P+ TF +++ C V
Sbjct: 547 FEKVE-KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGL 605
Query: 150 VLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ + H + L+ + + +V+ + + +EA+K +P + D V+W ++
Sbjct: 606 FDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLL 665
Query: 208 N 208
+
Sbjct: 666 S 666
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 281/524 (53%), Gaps = 41/524 (7%)
Query: 132 PDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
PD TFP L+K C + + G V LG DV++ +A ++ C M EA K+
Sbjct: 118 PDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKL 177
Query: 192 FEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGF 250
F+ +RD+V WN ++ GY + G +ALE+F RM +G + T+ GV+S +
Sbjct: 178 FDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRD 237
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK------GKCVGEALE------------- 291
+ GR +HG V G V +MN ++DMY K K V E ++
Sbjct: 238 LELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVG 297
Query: 292 ------------IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
+F+ M E+D+F WN++MT + QC LRLF M A +PD +T
Sbjct: 298 YAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITM 357
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+L ACS L AL G +H YI ++ + V + L+DMY+KCG++ A
Sbjct: 358 VNLLSACSQLGALEMGMWVHHYIDRRRVSLS--------VMLGTNLVDMYSKCGNIEKAI 409
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
VF ++ +K+ +W MI G G A+ F M E L+PDE+TF+GVLSAC H+G
Sbjct: 410 RVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAG 469
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+ +G+EF LM S+Y + ++HY+C++D+LGRAG L+EA L MP E + VVW L
Sbjct: 470 LVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGAL 529
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
A R+HGN L E AA ++ +L+PG G YVL++N+Y ++ +R MR V
Sbjct: 530 FFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVE 589
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREH 623
K PGCS IEL +H FI D+SH + +IY LH +T ++ EH
Sbjct: 590 KVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQI-EH 632
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 32/315 (10%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T I + A +L+ G+ +H Y+ G+ + + +++MY KC ++ A VF +
Sbjct: 224 TMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGI 283
Query: 94 S------------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
E +VF +NA+++G+ + L F+
Sbjct: 284 DKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFH 343
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
M++ V PD T L+ C + A+ +H + + + L V +G+ LV+ Y KC
Sbjct: 344 DMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCG 403
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+E+A++VF+E+P ++ + W AM++G A G A++ F+RM + G+ T GVLS
Sbjct: 404 NIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLS 463
Query: 244 ALIMMGFFKNGRVVHGIVV-KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDI 301
A G K G+ ++V K + + + ++D+ G+ + EA + M E D
Sbjct: 464 ACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDA 523
Query: 302 FSWNSIMTVHEQCGN 316
W ++ GN
Sbjct: 524 VVWGALFFACRMHGN 538
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
+PD +TF +L AC+ L +G + G ++ G DVF+ NA M C
Sbjct: 117 RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHA--------DVFVVNAAMHFLAVC 168
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC-EAKLKPDEVTFVGV 451
SM +A+ +F +D+ SWN +I GY G +EAL+MF M + + PDEVT +GV
Sbjct: 169 SSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGV 228
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
+S + L GR +ES +GV T+ V+DM + G L A + + ++
Sbjct: 229 VSGSAQLRDLELGRRLHGYVES-HGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGI-DKK 286
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGH-CGNYVLMSNIYVAGGKYEEVLDIR 570
V W T++ G D A++VF P + + YV + +E L +
Sbjct: 287 TIVSWTTMIVGYAQFGLMD----DARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLF 342
Query: 571 HTMRQQNVRKN 581
H M++ V +
Sbjct: 343 HDMQEAMVEPD 353
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 313/559 (55%), Gaps = 12/559 (2%)
Query: 65 DSPLSIT-SLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFN 123
+S L+++ S++NMY KC ++ A +F ++ C ++ ++N+++S + + L
Sbjct: 179 ESDLALSNSMVNMYGKCGRIADARRLFESIGCR-DIVSWNSLLSAYSKIGATEEILQLLQ 237
Query: 124 HMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKC 182
M+ + PDK TF C + L + K +HGL+ K GL++D ++ SALV YL+C
Sbjct: 238 AMKIEDIKPDKQTF-CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296
Query: 183 QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVL 242
+ ++ A KVF+ +DVV+W AM++G Q KAL VF +M + + S T+ L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356
Query: 243 SALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIF 302
+A +G G +HG V++ G +P N+L+ MY K + ++ IF M EKD+
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
SWN+I+ H + G + F+ M + +PD +T +++L AC AL G+ IH ++
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
+ + L I + AL+DMY KCG++ +AQ F M ++D+ +W+ +I+GYG
Sbjct: 477 LRSSL--------IPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGF 528
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
+G+G+ AL +S ++P+ V F+ VLSACSH G +S+G M + + P +E
Sbjct: 529 NGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLE 588
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
H CV+D+L RAG+++EAY M E + VV LL A R++G +L ++ A+ +F+L
Sbjct: 589 HRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFEL 648
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P GN+V ++N Y + +++ V MR ++K PG S IE+ TF +S S
Sbjct: 649 KPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFFASHNS 708
Query: 603 HPEAKSIYAELHSLTARLR 621
HP+ + I + +L+ +R
Sbjct: 709 HPKIEKIILTVKALSKNIR 727
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 208/427 (48%), Gaps = 13/427 (3%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++N+++S + L + M++ D YTFP L K C ++ +H V
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
GL D YIGS+L++ Y K + KVF+ + R+VV W ++ Y++ G+ A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F++M + GI + T +LS L + +H +++ G++S + + N++++MY
Sbjct: 136 SMFKQMRESGIQPTSVT---LLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
GK + +A +FE + +DI SWNS+++ + + G + L+L M +PD TF
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+ L A + L G+ +HG ++ +GL +ID + +AL+ +Y +C + A
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGL-------NIDQ-HVESALVVLYLRCRCLDPAYK 304
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
VF ++KDV W MI G + +AL +F M E+ +KP T L+AC+ G
Sbjct: 305 VFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGC 364
Query: 461 LSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
G + R G++ I ++ M + +L ++ + M E + V W ++
Sbjct: 365 CDIGASIHGYVL-RQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMV-EKDLVSWNAIV 422
Query: 521 AASRLHG 527
A +G
Sbjct: 423 AGHAKNG 429
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 168/332 (50%), Gaps = 13/332 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNN 92
T ++L A + +L+ G+ +H ML+ G+ ID + ++L+ +Y +C + A VF +
Sbjct: 250 TFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVE-SALVVLYLRCRCLDPAYKVFKS 308
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTF-----PCLIKCCCDV 147
+ E +V + AMISG ND A K L F M + V P T C CCD+
Sbjct: 309 -TTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
A IHG V + G+ LD+ ++LV Y KC ++++ +F ++ +D+V WNA+V
Sbjct: 368 GA-----SIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
G+A+ G K + F M K + TVT +L A G G+ +H V++
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
+ AL+DMY K + A + F+ M ++D+ +W++++ + G + LR +
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
L G +P+ V F +VL ACSH + G I+
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIY 574
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
+ AT + L CA G IH Y+LR GI+ + SL+ MY+KC +++ + +F
Sbjct: 348 STATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIF 407
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + E ++ ++NA+++G N + KG+ FFN MR+ + PD T L++ C A+
Sbjct: 408 NKM-VEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGAL 466
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
+ K IH V + L + +ALV+ Y KC +E A K F+ + RD+V W+ ++ GY
Sbjct: 467 CQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGY 526
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK-MGYDSG 269
G+ AL + G+ + VLSA G G ++ + K
Sbjct: 527 GFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPN 586
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMM 296
+ ++D+ + V EA ++MM
Sbjct: 587 LEHRACVVDLLSRAGKVDEAYSFYKMM 613
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 197/596 (33%), Positives = 310/596 (52%), Gaps = 23/596 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ A + + G ++H +L+ G + +LI+MY+KC +++ A VF + E N
Sbjct: 11 LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP-ERN 69
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++ A++ GF + A + L MR L V P+++T +K C V + IH
Sbjct: 70 VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + G + + ++LV Y K + +A +VF+ R++V WNAM++GYA G
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189
Query: 218 KALEVFR-----RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD--SGV 270
+L VFR R +E FT +L A +G + G VH +V G S
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249
Query: 271 PVMNALIDMYGKGKCV-GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
+ AL+DMY K +C+ A+++F +E+K+ W +++ H Q G + LF R S
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWS 309
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSCKDIDDVFMNNALMD 387
+G + D S+V+ + A + GRQ+H Y V GL DV + N+L+D
Sbjct: 310 SGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL----------DVSVANSLID 359
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KCG +A F ++ ++V SW MI G G G G+EA+ MF M ++PDEV
Sbjct: 360 MYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVA 419
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
++ +LSACSHSG + + R + + + P EHY C++D+LGRAG+L+EA +L M
Sbjct: 420 YLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATM 479
Query: 508 PNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVL 567
P VW+TLL+A R+H N + A + + ++ + NYV++SNI+ G + E
Sbjct: 480 PMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQ 539
Query: 568 DIRHTMRQQNVRKNPGCSWIELKDGLHTFI-SSDRSHPEAKSIYAELHSLTARLRE 622
+R MR++ +RK GCSW+E+ H F D SHP A I L + +RE
Sbjct: 540 RVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRE 595
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 177/373 (47%), Gaps = 27/373 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL+ ASL+ C ++ G IH +R G + SL+ +YSK ++ A V
Sbjct: 107 FTLS---ASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRV 163
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-----LPDKYTFPCLIKCC 144
F+ + N+ T+NAMISG+ L F M+Q PD++TF L+K C
Sbjct: 164 FDG-TVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKAC 222
Query: 145 CDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQ-FMEEALKVFEELPLRDVV 201
+ A E ++H + G+ + + AL++ Y+KC+ + A++VF L ++ +
Sbjct: 223 GSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAI 282
Query: 202 LWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIV 261
W ++ G+AQ G+ +A+E+F R G+ ++ V+ + GR VH
Sbjct: 283 QWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYT 342
Query: 262 VKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTL 321
VK V V N+LIDMY K EA F + +++ SW +++ + G+ +
Sbjct: 343 VKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAI 402
Query: 322 RLFDRMLSAGFQPDLVTFSTVLPACSH----------LAALMHGRQI-----HGYIVVNG 366
+F+ M + G +PD V + +L ACSH +A+ H R++ H +V+
Sbjct: 403 HMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDL 462
Query: 367 LAKNGSCKDIDDV 379
L + G + D+
Sbjct: 463 LGRAGELSEAKDL 475
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 14/246 (5%)
Query: 235 RFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
R + +L A G +HG ++K+G+ S + N LIDMY K + A E+F
Sbjct: 4 RKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFG 63
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS-AGFQPDLVTFSTVLPACSHLAALM 353
M E+++ SW ++M + G+ LRL M S + P+ T S L AC + +
Sbjct: 64 GMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMA 123
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G IHG V G + + N+L+ +Y+K G + DA+ VF +++ +W
Sbjct: 124 AGVWIHGACVRAGFEGHH--------VVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTW 175
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKL-----KPDEVTFVGVLSACSHSGFLSQGREFL 468
N MI GY G G+++L +F M + + +PDE TF +L AC G +G +
Sbjct: 176 NAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVH 235
Query: 469 PLMESR 474
M R
Sbjct: 236 AAMVIR 241
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 169/503 (33%), Positives = 295/503 (58%), Gaps = 13/503 (2%)
Query: 127 QLGVLPDKYTFP---CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
Q+ +L + F ++ C A+ E +++H + K VY+ + L+ Y KC
Sbjct: 80 QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 139
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ +A ++F+E+P ++VV W AM++ Y+Q G +AL +F M + + FT +L+
Sbjct: 140 CLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 199
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
+ F+ GR +H I +K Y+S + V ++L+DMY K + +A +F + E+D+ +
Sbjct: 200 SCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVA 259
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+I++ + Q G + L+LF ++ G + VT+++VL A S LAAL HG+Q+H +++
Sbjct: 260 CTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVL 319
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+G V + N+L+DMY+KCG++ A+ +F M ++ SWN M++GY
Sbjct: 320 RSG--------QYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKH 371
Query: 424 GQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTI 481
G +E L++F M E K+KPD +T++ VLS CSH G E F ++ + G+ P I
Sbjct: 372 GMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDI 431
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
HY CV+D+LGRAG++ EA++ MP +W +LL + R+H + ++ I Q++ +
Sbjct: 432 GHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 491
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
LEP + GNYV++SN+Y + GK+E++ +IR M+++ V K PG SW+EL +HTF +SD
Sbjct: 492 LEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDH 551
Query: 602 SHPEAKSIYAELHSLTARLREHG 624
+HP + + ++ L+ + +E G
Sbjct: 552 THPRREEVAKKVKELSIKFKEDG 574
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 196/368 (53%), Gaps = 8/368 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C Q +++GQ +H++M++T + S T LI +Y+KC + A +F+ + + N
Sbjct: 97 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP-QKN 155
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ AMIS + FAF+ L+ F M + P+ +TF ++ C + ++IH
Sbjct: 156 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 215
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K + +++GS+L++ Y K + +A VF LP RDVV A+++GYAQ+G +
Sbjct: 216 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 275
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++FR++ EG+ + T VL+AL + +G+ VH V++ G S V ++N+LID
Sbjct: 276 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 335
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLV 337
MY K V A IF+ M E+ SWN+++ + + G L LF M +PD +
Sbjct: 336 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 395
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ VL CSH G +I Y +VNG K+G DI ++D+ + G + +
Sbjct: 396 TYLAVLSGCSHGQLEDMGLEIF-YNMVNG--KDGIEPDIGHY---GCVVDLLGRAGRVEE 449
Query: 398 AQMVFTKM 405
A KM
Sbjct: 450 AFDFIKKM 457
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 294/503 (58%), Gaps = 13/503 (2%)
Query: 127 QLGVLPDKYTFP---CLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ 183
Q+ +L + F ++ C A+ E +++H + K VY+ + L+ Y KC
Sbjct: 52 QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCD 111
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
+ +A +F+E+P R+VV W AM++ Y+Q G +AL +F M + + FT +L+
Sbjct: 112 CLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILT 171
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
+ F+ GR +H I +K Y+S + V ++L+DMY K + +A +F + E+D+ +
Sbjct: 172 SCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVA 231
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+I++ + Q G + L+LF ++ G + VT+++VL A S LAAL HG+Q+H +++
Sbjct: 232 CTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVL 291
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
+G V + N+L+DMY+KCG++ A+ +F M ++ SWN M++GY
Sbjct: 292 RSG--------QYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKH 343
Query: 424 GQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTI 481
G +E L++F M E K+KPD +T++ VLS CSH G E F ++ + G+ P I
Sbjct: 344 GMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDI 403
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQ 541
HY CV+D+LGRAG++ EA++ MP +W +LL + R+H + ++ I Q++ +
Sbjct: 404 GHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE 463
Query: 542 LEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDR 601
LEP + GNYV++SN+Y + GK+E++ +IR M+++ V K PG SW+EL +HTF +SD
Sbjct: 464 LEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDH 523
Query: 602 SHPEAKSIYAELHSLTARLREHG 624
+HP + + ++ L+ + +E G
Sbjct: 524 THPRREEVANKVKELSIKFKEDG 546
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 196/368 (53%), Gaps = 8/368 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C Q +++GQ +H++M++T + S T LI +Y+KC + A +F+ + + N
Sbjct: 69 LNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP-QRN 127
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++ AMIS + FAF+ L+ F M + P+ +TF ++ C + ++IH
Sbjct: 128 VVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHS 187
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ K + +++GS+L++ Y K + +A VF LP RDVV A+++GYAQ+G +
Sbjct: 188 IAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEE 247
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL++FR++ EG+ + T VL+AL + +G+ VH V++ G S V ++N+LID
Sbjct: 248 ALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLID 307
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLV 337
MY K V A IF+ M E+ SWN+++ + + G L LF M +PD +
Sbjct: 308 MYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSI 367
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T+ VL CSH G +I Y +VNG K+G DI ++D+ + G + +
Sbjct: 368 TYLAVLSGCSHGQLEDMGLEIF-YNMVNG--KDGIEPDIGHY---GCVVDLLGRAGRVEE 421
Query: 398 AQMVFTKM 405
A KM
Sbjct: 422 AFDFIKKM 429
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,271,921,559
Number of Sequences: 23463169
Number of extensions: 426387338
Number of successful extensions: 1402242
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8924
Number of HSP's successfully gapped in prelim test: 2700
Number of HSP's that attempted gapping in prelim test: 1181508
Number of HSP's gapped (non-prelim): 62561
length of query: 660
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 511
effective length of database: 8,863,183,186
effective search space: 4529086608046
effective search space used: 4529086608046
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 80 (35.4 bits)