BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048281
(660 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/623 (54%), Positives = 444/623 (71%), Gaps = 14/623 (2%)
Query: 8 INPFSSCFNFSTSSGNQTFNHP-----FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG 62
I P S+ + ++ Q +P +ATCIA+LQ CA + + GQ+IH +M+R G
Sbjct: 31 IKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKG 90
Query: 63 IID-SPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDF 121
+D SP + TSL+NMY+KC M+ A+ VF E +VF YNA+ISGF N ++
Sbjct: 91 FLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG--SERDVFGYNALISGFVVNGSPLDAMET 148
Query: 122 FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLK 181
+ MR G+LPDKYTFP L+K D M + +VKK+HGL FKLG D D Y+GS LV +Y K
Sbjct: 149 YREMRANGILPDKYTFPSLLKGS-DAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSK 207
Query: 182 CQFMEEALKVFEELPLRD-VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG 240
+E+A KVF+ELP RD VLWNA+VNGY+QI F AL VF +M +EG+ +SR T+T
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 241 VLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
VLSA + G NGR +HG+ VK G S + V NALIDMYGK K + EA IFE M+E+D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
+F+WNS++ VH+ CG+HDGTL LF+RML +G +PD+VT +TVLP C LA+L GR+IHG
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGY 420
Y++V+GL S + F++N+LMDMY KCG +RDA+MVF M KD ASWNIMI GY
Sbjct: 388 YMIVSGLLNRKSSNE----FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY 443
Query: 421 GMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPT 480
G+ G+ ALDMFSCMC A +KPDE+TFVG+L ACSHSGFL++GR FL ME+ Y ++PT
Sbjct: 444 GVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPT 503
Query: 481 IEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF 540
+HY CVIDMLGRA +L EAYELA++ P NPVVWR++L++ RLHGN DLA +A +R+
Sbjct: 504 SDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLH 563
Query: 541 QLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSD 600
+LEP HCG YVLMSN+YV GKYEEVLD+R MRQQNV+K PGCSWI LK+G+HTF + +
Sbjct: 564 ELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGN 623
Query: 601 RSHPEAKSIYAELHSLTARLREH 623
++HPE KSI+ L + + + H
Sbjct: 624 QTHPEFKSIHDWLSLVISHMHGH 646
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/609 (35%), Positives = 359/609 (58%), Gaps = 24/609 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
FTL + + + L G+++H+Y LR G ++S + I +L+ MY K ++ + +
Sbjct: 200 FTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFI-INTLVAMYGKLGKLASSKVL 258
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
+ ++ T+N ++S N+ + L++ M GV PD++T ++ C +
Sbjct: 259 LGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 150 VLEVKKIHGLVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++H K G LD + ++GSALV+ Y C+ + +VF+ + R + LWNAM+
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 209 GYAQIGEFHKALEVFRRMSKE-GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY+Q +AL +F M + G+ + T+ GV+ A + G F +HG VVK G D
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF--- 324
V N L+DMY + + A+ IF ME++D+ +WN+++T + +H+ L L
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 325 ---DRMLSAG-----FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
+R +S G +P+ +T T+LP+C+ L+AL G++IH Y + N LA
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLAT------- 550
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM 436
DV + +AL+DMY KCG ++ ++ VF ++ +K+V +WN++I+ YGM G G+EA+D+ M
Sbjct: 551 -DVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMM 609
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
+KP+EVTF+ V +ACSHSG + +G +M+ YGV P+ +HY CV+D+LGRAG+
Sbjct: 610 MVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGR 669
Query: 497 LNEAYELALAMPNEANPV-VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSN 555
+ EAY+L MP + N W +LL ASR+H N ++ EIAAQ + QLEP +YVL++N
Sbjct: 670 IKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLAN 729
Query: 556 IYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHS 615
IY + G +++ ++R M++Q VRK PGCSWIE D +H F++ D SHP+++ + L +
Sbjct: 730 IYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLET 789
Query: 616 LTARLREHG 624
L R+R+ G
Sbjct: 790 LWERMRKEG 798
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 266/558 (47%), Gaps = 34/558 (6%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSC 95
A L+ A +++ G++IH+++ + G +DS +L+N+Y KC VF+ +S
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRIS- 160
Query: 96 EPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV---MAVLE 152
E N ++N++IS S + L+ F M V P +T ++ C ++ ++
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
K++H + G +L+ +I + LV Y K + + + RD+V WN +++ Q
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVP 271
+ +ALE R M EG+ FT++ VL A + + G+ +H +K G D
Sbjct: 280 NEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSF 339
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LSA 330
V +AL+DMY K V +F+ M ++ I WN+++ + Q + L LF M SA
Sbjct: 340 VGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESA 399
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G + T + V+PAC A IHG++V GL + D F+ N LMDMY+
Sbjct: 400 GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDR--------DRFVQNTLMDMYS 451
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-----------CEA 439
+ G + A +F KM +D+ +WN MI GY ++AL + M
Sbjct: 452 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 511
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
LKP+ +T + +L +C+ L++G+E + + + + + ++DM + G L
Sbjct: 512 SLKPNSITLMTILPSCAALSALAKGKE-IHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
+ ++ +P + N + W ++ A +HGN A I R+ ++ G N V +++ A
Sbjct: 571 SRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEA-IDLLRMMMVQ-GVKPNEVTFISVFAA 627
Query: 560 ---GGKYEEVLDIRHTMR 574
G +E L I + M+
Sbjct: 628 CSHSGMVDEGLRIFYVMK 645
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 228/471 (48%), Gaps = 26/471 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
H Y+LR +P S T + + ++F+ + S E + + + S SN
Sbjct: 29 HPYLLRA----TPTSATEDV---ASAVSGAPSIFISQSRSPE---WWIDLLRSKVRSNLL 78
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD-VYIGS 173
L + + M LG+ PD Y FP L+K D+ + K+IH V+K G +D V + +
Sbjct: 79 REAVLTYVD-MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
LVN Y KC KVF+ + R+ V WN++++ ++ ALE FR M E +
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 234 SRFTVTGVLSA---LIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S FT+ V++A L M G+ VH ++ G + ++N L+ MYGK + +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+ +D+ +WN++++ Q L M+ G +PD T S+VLPACSHL
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G+++H Y + KNGS ++ F+ +AL+DMY C + + VF M + +
Sbjct: 317 MLRTGKELHAYAL-----KNGSLD--ENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKI 369
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
WN MI GY + KEAL +F M E A L + T GV+ AC SG S+ +E +
Sbjct: 370 GLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIH 428
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G+ ++DM R G+++ A + M + + V W T++
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMI 478
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 346/586 (59%), Gaps = 9/586 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C + L+ G+EIH ++++G ++T L NMY+KC Q+ A VF+ + E +
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERD 200
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N +++G+ N A L+ M + + P T ++ + + K+IHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ G D V I +ALV+ Y KC +E A ++F+ + R+VV WN+M++ Y Q +
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+ +F++M EG+ + +V G L A +G + GR +H + V++G D V V+N+LI
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K K V A +F ++ + + SWN+++ Q G L F +M S +PD T
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFT 440
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ +V+ A + L+ H + IHG ++ + L KN VF+ AL+DMY KCG++ A
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKN--------VFVTTALVDMYAKCGAIMIA 492
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
+++F MS++ V +WN MI GYG G GK AL++F M + +KP+ VTF+ V+SACSHS
Sbjct: 493 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G + G + +M+ Y + +++HY ++D+LGRAG+LNEA++ + MP + V+
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
+L A ++H N + AE AA+R+F+L P G +VL++NIY A +E+V +R +M +Q +
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
RK PGCS +E+K+ +H+F S +HP++K IYA L L ++E G
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Score = 245 bits (626), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 157/503 (31%), Positives = 257/503 (51%), Gaps = 19/503 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
+ HP L L+ C ++L++ ++I + + G+ T L++++ + +
Sbjct: 35 VYEHPAALL-----LERC---SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVD 86
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A VF + + NV Y+ M+ GF K L FF MR V P Y F L+K C
Sbjct: 87 EAARVFEPIDSKLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 145 CDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWN 204
D + K+IHGL+ K G LD++ + L N Y KC+ + EA KVF+ +P RD+V WN
Sbjct: 146 GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN 205
Query: 205 AMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM 264
+V GY+Q G ALE+ + M +E + S T+ VL A+ + G+ +HG ++
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 265 GYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
G+DS V + AL+DMY K + A ++F+ M E+++ SWNS++ + Q N + +F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ML G +P V+ L AC+ L L GR IH V GL +N V + N+
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN--------VSVVNS 377
Query: 385 LMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPD 444
L+ MY KC + A +F K+ + + SWN MILG+ +G+ +AL+ FS M +KPD
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
Query: 445 EVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELA 504
T+V V++A + ++ +++ + R + + T ++DM + G + A L
Sbjct: 438 TFTYVSVITAIAELS-ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLI 495
Query: 505 LAMPNEANPVVWRTLLAASRLHG 527
M +E + W ++ HG
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHG 518
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/588 (36%), Positives = 342/588 (58%), Gaps = 12/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEP 97
L +CA + + G ++H ++ +G+ D SI SL++MYSKC + A +F +S
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGV-DFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RA 303
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ T+N MISG+ + + L FF M GVLPD TF L+ + K+IH
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ + + LD+++ SAL++ Y KC+ + A +F + DVV++ AM++GY G +
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+LE+FR + K I + T+ +L + ++ K GR +HG ++K G+D+ + A+I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DMY K + A EIFE + ++DI SWNS++T Q N + +F +M +G D V
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
+ S L AC++L + G+ IHG+++ + LA DV+ + L+DMY KCG+++
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLAS--------DVYSESTLIDMYAKCGNLKA 595
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCE-AKLKPDEVTFVGVLSACS 456
A VF M +K++ SWN +I G G+ K++L +F M E + ++PD++TF+ ++S+C
Sbjct: 596 AMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G F M YG+ P EHY CV+D+ GRAG+L EAYE +MP + VW
Sbjct: 656 HVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVW 715
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
TLL A RLH N +LAE+A+ ++ L+P + G YVL+SN + ++E V +R M+++
Sbjct: 716 GTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKER 775
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
V+K PG SWIE+ H F+S D +HPE+ IY+ L+SL LR G
Sbjct: 776 EVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 250/495 (50%), Gaps = 11/495 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE-P 97
LQ C++ L++G+++H++++ I + ++ MY+ C +F L
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
++ +N++IS F N + L F+ M GV PD TFPCL+K C + + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V LG+D + ++ S+L+ YL+ ++ K+F+ + +D V+WN M+NGYA+ G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
++ F M + I + T VLS G +HG+VV G D + N+L+
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY K +A ++F MM D +WN +++ + Q G + +L F M+S+G PD +
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAI 341
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
TFS++LP+ S L + +QIH YI+ + ++ D+F+ +AL+D Y KC +
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISL--------DIFLTSALIDAYFKCRGVSM 393
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
AQ +F++ + DV + MI GY +G ++L+MF + + K+ P+E+T V +L
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L GRE + + G VIDM + G++N AYE+ + ++ + V W
Sbjct: 454 LLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL-SKRDIVSWN 511
Query: 518 TLLAASRLHGNTDLA 532
+++ N A
Sbjct: 512 SMITRCAQSDNPSAA 526
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 163/343 (47%), Gaps = 13/343 (3%)
Query: 117 KGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSAL 175
K L N R L +P + + L++ C + + + K++H + + D Y +
Sbjct: 19 KSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI 76
Query: 176 VNTYLKCQFMEEALKVFEELPLR--DVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
+ Y C + K+F L LR + WN++++ + + G ++AL + +M G+
Sbjct: 77 LGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSP 136
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
T ++ A + + FK + V +G D V ++LI Y + + ++F
Sbjct: 137 DVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF 196
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ + +KD WN ++ + +CG D ++ F M P+ VTF VL C+ +
Sbjct: 197 DRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID 256
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG +VV+G+ GS K N+L+ MY+KCG DA +F MS+ D +W
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIK--------NSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
N MI GY G +E+L F M + + PD +TF +L + S
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A+L CA+ + G+ IH +M++ + S ++LI+MY+KC +K A+ VF + E
Sbjct: 547 AALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-E 605
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDKYTFPCLIKCCCDVMAVLE-VK 154
N+ ++N++I+ ++ L F+ M + G+ PD+ TF +I CC V V E V+
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 155 KIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-RDVVLWNAMVNGYAQI 213
+ G+ + +V+ + + + EA + + +P D +W ++
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA---- 721
Query: 214 GEFHKALEV 222
HK +E+
Sbjct: 722 CRLHKNVEL 730
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/650 (35%), Positives = 354/650 (54%), Gaps = 57/650 (8%)
Query: 15 FNFSTSSGNQTF----NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI 70
F+F SS + + NHP SL L + LQ + IH+ M++ G+ ++ ++
Sbjct: 17 FHFLPSSSDPPYDSIRNHP--------SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYAL 68
Query: 71 TSLIN---MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+ LI + + YA+ VF + EPN+ +N M G + L + M
Sbjct: 69 SKLIEFCILSPHFEGLPYAISVFKTIQ-EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQ---- 183
LG+LP+ YTFP ++K C A E ++IHG V KLG DLD+Y+ ++L++ Y++
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187
Query: 184 ---------------------------FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
++E A K+F+E+P++DVV WNAM++GYA+ G +
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F+ M K + T+ V+SA G + GR VH + G+ S + ++NAL
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
ID+Y K + A +FE + KD+ SWN+++ + + L LF ML +G P+
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 367
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI--VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
VT ++LPAC+HL A+ GR IH YI + G+ S + +L+DMY KCG
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS--------LRTSLIDMYAKCGD 419
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A VF + K ++SWN MI G+ M G+ + D+FS M + ++PD++TFVG+LSA
Sbjct: 420 IEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
CSHSG L GR M Y + P +EHY C+ID+LG +G EA E+ M E + V
Sbjct: 480 CSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGV 539
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W +LL A ++HGN +L E A+ + ++EP + G+YVL+SNIY + G++ EV R +
Sbjct: 540 IWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLN 599
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ ++K PGCS IE+ +H FI D+ HP + IY L + L + G
Sbjct: 600 DKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 360/631 (57%), Gaps = 24/631 (3%)
Query: 1 MLSKISRINPFSSC---FNFSTSSGNQTFNHPFT-LATCIASLQLCAHQTNLQKGQEIHS 56
+++++++ FS F SSG + ++ F+ ++ +SL+ ++ G+++H
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR------SVHGGEQLHG 219
Query: 57 YMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAF 116
++L++G + SL+ Y K ++ A VF+ ++ E +V ++N++I+G+ SN A
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAE 278
Query: 117 KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
KGL F M G+ D T + C D + + +H + K + + L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 177 NTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRF 236
+ Y KC ++ A VF E+ R VV + +M+ GYA+ G +A+++F M +EGI +
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 237 TVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDSGVPVMNALIDMYGKGKCVGEALEIFE 294
TVT VL+ G+ VH + + +G+D + V NAL+DMY K + EA +F
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD--IFVSNALMDMYAKCGSMQEAELVFS 456
Query: 295 MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPDLVTFSTVLPACSHLAALM 353
M KDI SWN+I+ + + + L LF+ +L F PD T + VLPAC+ L+A
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
GR+IHGYI+ NG D + N+L+DMY KCG++ A M+F ++ KD+ SW
Sbjct: 517 KGREIHGYIMRNGY--------FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 568
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+MI GYGM G GKEA+ +F+ M +A ++ DE++FV +L ACSHSG + +G F +M
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ PT+EHY C++DML R G L +AY MP + +W LL R+H + LAE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
A++VF+LEP + G YVLM+NIY K+E+V +R + Q+ +RKNPGCSWIE+K +
Sbjct: 689 KVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ F++ D S+PE ++I A L + AR+ E G
Sbjct: 749 NIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Score = 253 bits (646), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/501 (33%), Positives = 256/501 (51%), Gaps = 17/501 (3%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTG-IIDSPLSITSLINMYSKCCQMKYAL 87
P TL + LQLCA +L+ G+E+ +++ G +IDS L + L MY+ C +K A
Sbjct: 94 PRTLCSV---LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG-SKLSLMYTNCGDLKEAS 149
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + E +F M S DF+ + F M GV D YTF C+ K +
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFS-GSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+V +++HG + K G +G++LV YLK Q ++ A KVF+E+ RDV+ WN+++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSII 268
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
NGY G K L VF +M GI + T+ V + GR VH I VK +
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
N L+DMY K + A +F M ++ + S+ S++ + + G ++LF+ M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
G PD+ T + VL C+ L G+++H +I N L D+F++NALMD
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF--------DIFVSNALMD 440
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAK-LKPDEV 446
MY KCGSM++A++VF++M KD+ SWN +I GY + EAL +F+ + E K PDE
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T VL AC+ +GRE + R G ++DM + G L A+ L
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD 559
Query: 507 MPNEANPVVWRTLLAASRLHG 527
+ ++ + V W ++A +HG
Sbjct: 560 IASK-DLVSWTVMIAGYGMHG 579
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 197/391 (50%), Gaps = 12/391 (3%)
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D T +++ C D ++ + K++ + G +D +GS L Y C ++EA +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+ + + WN ++N A+ G+F ++ +F++M G+ M +T + V + +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG ++K G+ V N+L+ Y K + V A ++F+ M E+D+ SWNSI+ +
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G + L +F +ML +G + DL T +V C+ + GR +H V +
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV-------KA 325
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
C +D F N L+DMY+KCG + A+ VF +MS + V S+ MI GY +G EA+ +
Sbjct: 326 CFSREDRFC-NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP-LMESRYGVVPTIEHYTCVIDML 491
F M E + PD T VL+ C+ L +G+ + E+ G + + ++DM
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMY 442
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ G + EA EL + + + W T++
Sbjct: 443 AKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 344/633 (54%), Gaps = 44/633 (6%)
Query: 27 NHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSKCCQMK 84
N P T + L +L++ ++ H +M+RTG P S + L M S ++
Sbjct: 22 NQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLE 81
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSN-DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
YA VF+ + +PN F +N +I + S D F + + + P+KYTFP LIK
Sbjct: 82 YARKVFDEIP-KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKA 140
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
+V ++ + +HG+ K + DV++ ++L++ Y C ++ A KVF + +DVV W
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M+NG+ Q G KALE+F++M E + S T+ GVLSA + + GR V + +
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD----------------------- 300
+ + + NA++DMY K + +A +F+ MEEKD
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 301 --------IFSWNSIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAA 351
I +WN++++ +EQ G + L +F + L + + +T + L AC+ + A
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L GR IH YI +G+ N + +AL+ MY+KCG + ++ VF + K+DV
Sbjct: 381 LELGRWIHSYIKKHGIRMN--------FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
W+ MI G M G G EA+DMF M EA +KP+ VTF V ACSH+G + + M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
ES YG+VP +HY C++D+LGR+G L +A + AMP + VW LL A ++H N +L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 532 AEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKD 591
AE+A R+ +LEP + G +VL+SNIY GK+E V ++R MR ++K PGCS IE+
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 592 GLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F+S D +HP ++ +Y +LH + +L+ +G
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNG 645
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/623 (34%), Positives = 344/623 (55%), Gaps = 31/623 (4%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
Q N + + + L+ CA + L+ G ++H++ L++ + T+ ++MY+KC M
Sbjct: 273 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 332
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKC 143
+ A +F+N S N +YNAMI+G+ + FK L F+ + G+ D+ + + +
Sbjct: 333 QDAQILFDN-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 144 CCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLW 203
C V + E +I+GL K L LDV + +A ++ Y KCQ + EA +VF+E+ RD V W
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSW 451
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
NA++ + Q G+ ++ L +F M + I FT +L A G G +H +VK
Sbjct: 452 NAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVK 510
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEA----------------LEIFEMMEEKDI----FS 303
G S V +LIDMY K + EA +E E M K + S
Sbjct: 511 SGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS 570
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
WNSI++ + + LF RM+ G PD T++TVL C++LA+ G+QIH ++
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
L DV++ + L+DMY+KCG + D++++F K ++D +WN MI GY
Sbjct: 631 KKELQS--------DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G+G+EA+ +F M +KP+ VTF+ +L AC+H G + +G E+ +M+ YG+ P + H
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLH-GNTDLAEIAAQRVFQL 542
Y+ ++D+LG++G++ A EL MP EA+ V+WRTLL +H N ++AE A + +L
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 802
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
+P Y L+SN+Y G +E+V D+R MR ++K PGCSW+ELKD LH F+ D++
Sbjct: 803 DPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKA 862
Query: 603 HPEAKSIYAELHSLTARLREHGD 625
HP + IY EL + + ++ D
Sbjct: 863 HPRWEEIYEELGLIYSEMKPFDD 885
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/532 (27%), Positives = 259/532 (48%), Gaps = 38/532 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L++C+ + G +IH ++R G ++ ++L++MY+K + +L VF + E N
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKN 245
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+++A+I+G N+ L FF M+++ + + +++ C + + ++H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K D + +A ++ Y KC M++A +F+ + +NAM+ GY+Q K
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL +F R+ G+ +++GV A ++ G ++G+ +K V V NA ID
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MYGK + + EA +F+ M +D SWN+I+ HEQ G TL LF ML + +PD T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F ++L AC+ +L +G +IH IV +G+A N S + +L+DMY+KCG + +A
Sbjct: 486 FGSILKACTG-GSLGYGMEIHSSIVKSGMASNSS--------VGCSLIDMYSKCGMIEEA 536
Query: 399 QMVFT----------------KMSKKDV----ASWNIMILGYGMDGQGKEALDMFSCMCE 438
+ + + KM K + SWN +I GY M Q ++A +F+ M E
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 439 AKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTC--VIDMLGRAGQ 496
+ PD+ T+ VL C++ G++ + + + Y C ++DM + G
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYSKCGD 653
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVF--QLEPGH 546
L+++ L + V W ++ HG + A +R+ ++P H
Sbjct: 654 LHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNH 704
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 151/524 (28%), Positives = 256/524 (48%), Gaps = 45/524 (8%)
Query: 42 CAHQTNLQKGQEIHSYMLRTG--------------------------IIDS-PL----SI 70
CA Q L+ G++ H++M+ +G + D PL S
Sbjct: 58 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 117
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
+IN YSK M A FN + +V ++N+M+SG+ N + K ++ F M + G+
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVR-DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGI 176
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALK 190
D TF ++K C + +IHG+V ++G D DV SAL++ Y K + E+L+
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 191 VFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGF 250
VF+ +P ++ V W+A++ G Q AL+ F+ M K +S+ VL + +
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 251 FKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTV 310
+ G +H +K + + V A +DMY K + +A +F+ E + S+N+++T
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 311 HEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKN 370
+ Q + L LF R++S+G D ++ S V AC+ + L G QI+G + + L+
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL- 415
Query: 371 GSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEAL 430
DV + NA +DMY KC ++ +A VF +M ++D SWN +I + +G+G E L
Sbjct: 416 -------DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 431 DMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDM 490
+F M ++++PDE TF +L AC+ G L G E + + G+ +IDM
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLIDM 526
Query: 491 LGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEI 534
+ G + EA ++ AN V T+ ++H N L E+
Sbjct: 527 YSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMH-NKRLQEM 567
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 201/444 (45%), Gaps = 53/444 (11%)
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
DF N + + F + K C A+ K+ H + G ++ + L+ Y
Sbjct: 38 DFLNQVNSVSTT----NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVY 93
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYA---------------------------- 211
+ A VF+++PLRDVV WN M+NGY+
Sbjct: 94 TNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLS 153
Query: 212 ---QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Q GE K++EVF M +EGI T +L + G +HGIVV++G D+
Sbjct: 154 GYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT 213
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V +AL+DMY KGK E+L +F+ + EK+ SW++I+ Q L+ F M
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+++VL +C+ L+ L G Q+H + + + A +G + A +DM
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADG--------IVRTATLDM 325
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KC +M+DAQ++F + S+N MI GY + G +AL +F + + L DE++
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELA 504
GV AC+ LS+G + L + ++ CV IDM G+ L EA+ +
Sbjct: 386 SGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 505 LAMPNEANPVVWRTLLAASRLHGN 528
M + V W ++AA +G
Sbjct: 441 DEMRRR-DAVSWNAIIAAHEQNGK 463
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/581 (34%), Positives = 342/581 (58%), Gaps = 12/581 (2%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
T+ + ++IH+ +L G+ S IT LI+ S + +A VF++L P +F +NA+
Sbjct: 32 THKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP-RPQIFPWNAI 90
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
I G+ N+ L +++M+ V PD +TFP L+K C + + + +H VF+LG
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLWNAMVNGYAQIGEFHKALEVF 223
D DV++ + L+ Y KC+ + A VFE LPL R +V W A+V+ YAQ GE +ALE+F
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 224 RRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKG 283
+M K + + VL+A + K GR +H VVKMG + ++ +L MY K
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKC 270
Query: 284 KCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVL 343
V A +F+ M+ ++ WN++++ + + G + +F M++ +PD ++ ++ +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
AC+ + +L R ++ Y+ G DDVF+++AL+DM+ KCGS+ A++VF
Sbjct: 331 SACAQVGSLEQARSMYEYV--------GRSDYRDDVFISSALIDMFAKCGSVEGARLVFD 382
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ +DV W+ MI+GYG+ G+ +EA+ ++ M + P++VTF+G+L AC+HSG + +
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVRE 442
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G F M + + + P +HY CVID+LGRAG L++AYE+ MP + VW LL+A
Sbjct: 443 GWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501
Query: 524 RLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPG 583
+ H + +L E AAQ++F ++P + G+YV +SN+Y A ++ V ++R M+++ + K+ G
Sbjct: 502 KKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVG 561
Query: 584 CSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
CSW+E++ L F D+SHP + I ++ + +RL+E G
Sbjct: 562 CSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 163/318 (51%), Gaps = 1/318 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSC-EP 97
L+ C+ ++LQ G+ +H+ + R G LI +Y+KC ++ A VF L E
Sbjct: 126 LKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER 185
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ ++ A++S + N + L+ F+ MR++ V PD ++ + + + + IH
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
V K+GL+++ + +L Y KC + A +F+++ +++LWNAM++GYA+ G
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+++F M + + ++T +SA +G + R ++ V + Y V + +ALI
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
DM+ K V A +F+ ++D+ W++++ + G + L+ M G P+ V
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 338 TFSTVLPACSHLAALMHG 355
TF +L AC+H + G
Sbjct: 426 TFLGLLMACNHSGMVREG 443
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 95/189 (50%), Gaps = 7/189 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
+ +++ CA +L++ + ++ Y+ R+ D ++LI+M++KC ++ A VF+
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR- 383
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + +V ++AMI G+ + A + + + M + GV P+ TF L+ C V E
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD-VVLWNAMVNG--- 209
+ ++ + +++ + +++A +V + +P++ V +W A+++
Sbjct: 444 WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKK 503
Query: 210 --YAQIGEF 216
+ ++GE+
Sbjct: 504 HRHVELGEY 512
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/599 (34%), Positives = 353/599 (58%), Gaps = 18/599 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
+ FT A A+L + A + +G ++H+ +++ G+ + SLIN+Y KC ++ A
Sbjct: 193 NSFTFA---AALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKAR 249
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
+F+ + +V T+N+MISG+ +N + L F MR V + +F +IK C ++
Sbjct: 250 ILFDKTEVK-SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAM 206
+ +++H V K G D I +AL+ Y KC M +AL++F+E+ + +VV W AM
Sbjct: 309 KELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAM 368
Query: 207 VNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
++G+ Q +A+++F M ++G+ + FT + +L+AL ++ + VH VVK Y
Sbjct: 369 ISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNY 424
Query: 267 DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ V AL+D Y K V EA ++F +++KDI +W++++ + Q G + +++F
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALM-HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ G +P+ TFS++L C+ A M G+Q HG+ + + L + + +++AL
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS--------LCVSSAL 536
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY K G++ A+ VF + +KD+ SWN MI GY GQ +ALD+F M + K+K D
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDG 596
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
VTF+GV +AC+H+G + +G ++ +M + PT EH +C++D+ RAGQL +A ++
Sbjct: 597 VTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIE 656
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MPN A +WRT+LAA R+H T+L +AA+++ ++P YVL+SN+Y G ++E
Sbjct: 657 NMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQE 716
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+R M ++NV+K PG SWIE+K+ ++F++ DRSHP IY +L L+ RL++ G
Sbjct: 717 RAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 233/484 (48%), Gaps = 25/484 (5%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H ++ G +D TSL++ Y K K VF+ + E NV T+ +ISG+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK-ERNVVTWTTLISGYA 170
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
N + L F M+ G P+ +TF + + ++H +V K GLD +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ ++L+N YLKC + +A +F++ ++ VV WN+M++GYA G +AL +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ +S + V+ + + +H VVK G+ + AL+ Y K + +AL
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 291 EIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
+F E+ ++ SW ++++ Q + + LF M G +P+ T+S +L A
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL--- 407
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ ++H +V ++ + + AL+D Y K G + +A VF+ + KD
Sbjct: 408 -PVISPSEVHAQVVKTNYERSST--------VGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS-GFLSQGREFL 468
+ +W+ M+ GY G+ + A+ MF + + +KP+E TF +L+ C+ + + QG++F
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF- 517
Query: 469 PLMESRYGVVPTIEHYTCV----IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+ + ++ CV + M + G + A E+ E + V W ++++
Sbjct: 518 ----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEV-FKRQREKDLVSWNSMISGYA 572
Query: 525 LHGN 528
HG
Sbjct: 573 QHGQ 576
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 217/433 (50%), Gaps = 15/433 (3%)
Query: 101 TYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
+Y +++ GF + + F ++ +LG+ D F ++K + L +++H
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 161 FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKAL 220
K G DV +G++LV+TY+K ++ KVF+E+ R+VV W +++GYA+ + L
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
+F RM EG + FT L L G G VH +VVK G D +PV N+LI++Y
Sbjct: 180 TLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
K V +A +F+ E K + +WNS+++ + G L +F M + +F+
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
+V+ C++L L Q+H +V G + D + ALM Y+KC +M DA
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGF--------LFDQNIRTALMVAYSKCTAMLDALR 351
Query: 401 VFTKMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+F ++ +V SW MI G+ + +EA+D+FS M ++P+E T+ +L+A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP--- 408
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+S ++++ Y T+ T ++D + G++ EA ++ + ++ + V W +
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKV-FSGIDDKDIVAWSAM 465
Query: 520 LAASRLHGNTDLA 532
LA G T+ A
Sbjct: 466 LAGYAQTGETEAA 478
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ +D S+ S++ + G RLF + G + D FS+VL +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L + GRQ+H + G +DDV + +L+D Y K + +D + VF +M ++
Sbjct: 106 LCDELFGRQLHCQCIKFGF--------LDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
+V +W +I GY + E L +F M +P+ TF L + G +G +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ + G+ TI +I++ + G + +A + + V W ++++ +G
Sbjct: 218 TVV-VKNGLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANG 274
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/624 (33%), Positives = 340/624 (54%), Gaps = 48/624 (7%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
+ +++H+ +RT + S S + +I++Y+ + AL +F L P V + ++I F
Sbjct: 23 QAKQLHAQFIRTQSL-SHTSASIVISIYTNLKLLHEALLLFKTLKSPP-VLAWKSVIRCF 80
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
K L F MR G PD FP ++K C +M + + +HG + +LG+D D+
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 170 YIGSALVNTYLKCQFM------------------------------------EEALKVFE 193
Y G+AL+N Y K M + +VFE
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
+P +DVV +N ++ GYAQ G + AL + R M + FT++ VL
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ +HG V++ G DS V + ++L+DMY K + ++ +F + +D SWNS++ + Q
Sbjct: 261 GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQ 320
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G ++ LRLF +M++A +P V FS+V+PAC+HLA L G+Q+HGY++ G N
Sbjct: 321 NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN--- 377
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
+F+ +AL+DMY+KCG+++ A+ +F +M+ D SW +I+G+ + G G EA+ +F
Sbjct: 378 -----IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M +KP++V FV VL+ACSH G + + + M YG+ +EHY V D+LGR
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 494 AGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLM 553
AG+L EAY M E VW TLL++ +H N +LAE A+++F ++ + G YVLM
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 554 SNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAEL 613
N+Y + G+++E+ +R MR++ +RK P CSWIE+K+ H F+S DRSHP I L
Sbjct: 553 CNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Query: 614 HSLTARLREHGDCC--AGTLFDSD 635
++ ++ + G +G L D D
Sbjct: 613 KAVMEQMEKEGYVADTSGVLHDVD 636
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 198/431 (45%), Gaps = 47/431 (10%)
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
K LIK + + + K++H + L S +++ Y + + EAL +F+
Sbjct: 5 KALIKTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFK 63
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
L V+ W +++ + F KAL F M G VL + MM +
Sbjct: 64 TLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL----------------------- 290
G VHG +V++G D + NAL++MY K +G +
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 291 -------------EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
+FE+M KD+ S+N+I+ + Q G ++ LR+ M + +PD
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+VLP S ++ G++IHGY++ G+ DV++ ++L+DMY K + D
Sbjct: 244 TLSSVLPIFSEYVDVIKGKEIHGYVIRKGID--------SDVYIGSSLVDMYAKSARIED 295
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
++ VF+++ +D SWN ++ GY +G+ EAL +F M AK+KP V F V+ AC+H
Sbjct: 296 SERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
L G++ + R G I + ++DM + G + A ++ M N + V W
Sbjct: 356 LATLHLGKQLHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWT 413
Query: 518 TLLAASRLHGN 528
++ LHG+
Sbjct: 414 AIIMGHALHGH 424
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 177/356 (49%), Gaps = 19/356 (5%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ L + + ++ KG+EIH Y++R G IDS + I +SL++MY+K +++ +
Sbjct: 243 FTLSSV---LPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L C + ++N++++G+ N + L F M V P F +I C +
Sbjct: 299 VFSRLYCRDGI-SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K++HG V + G +++I SALV+ Y KC ++ A K+F+ + + D V W A++
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-GYD 267
G+A G H+A+ +F M ++G+ ++ VL+A +G + K+ G +
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 268 SGVPVMNALIDMYGKGKCVGEALE-IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR 326
+ A+ D+ G+ + EA I +M E W+++++ C H L L ++
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS---SCSVHK-NLELAEK 533
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGR-----QIHGYIVVNGLAKNGSCKDID 377
+ F D + C+ A+ +GR ++ + GL K +C I+
Sbjct: 534 VAEKIFTVDSENMGAYVLMCNMYAS--NGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/552 (38%), Positives = 306/552 (55%), Gaps = 42/552 (7%)
Query: 73 LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
L+ Y+ + A VF+ + E NV N MI + +N F +G+ F M V P
Sbjct: 80 LMRAYASLKDVASARKVFDEIP-ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
D YTFPC++K C ++ +KIHG K+GL +++G+ LV+ Y KC F+ EA V
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+E+ RDVV WN++V GYAQ F ALEV R M I T+ +L A+
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV------- 251
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
S N MY K ++F M +K + SWN ++ V+
Sbjct: 252 ---------------SNTTTENV---MYVK--------DMFFKMGKKSLVSWNVMIGVYM 285
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ + L+ RM + GF+PD V+ ++VLPAC +AL G++IHGYI L
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKL----- 340
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
I ++ + NAL+DMY KCG + A+ VF M +DV SW MI YG G+G +A+ +
Sbjct: 341 ---IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
FS + ++ L PD + FV L+ACSH+G L +GR LM Y + P +EH C++D+LG
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG++ EAY M E N VW LL A R+H +TD+ +AA ++FQL P G YVL
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SNIY G++EEV +IR+ M+ + ++KNPG S +E+ +HTF+ DRSHP++ IY E
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 613 LHSLTARLREHG 624
L L +++E G
Sbjct: 578 LDVLVKKMKELG 589
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 169/375 (45%), Gaps = 43/375 (11%)
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++ +H + L + +G L+ Y + + A KVF+E+P R+V++ N M+ Y
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
G + + ++VF M + +T VL A G GR +HG K+G S + V
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+ MYGK + EA + + M +D+ SWNS++ + Q D L + M S
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D T +++LPA S N + +++ MY K
Sbjct: 238 SHDAGTMASLLPAVS----------------------NTTTENV-----------MYVK- 263
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
+F KM KK + SWN+MI Y + EA++++S M +PD V+ VL
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
AC + LS G++ +E R ++P + +IDM + G L +A ++ M + +
Sbjct: 317 PACGDTSALSLGKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-D 374
Query: 513 PVVWRTLLAASRLHG 527
V W +++A G
Sbjct: 375 VVSWTAMISAYGFSG 389
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 34/318 (10%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C+ + G++IH + G+ + L++MY KC + A V + +S +
Sbjct: 147 LKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS-RRD 205
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N+++ G+ N L+ M + + D T L+ + V +
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENVMYVKD 264
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
+ FK+G + +V WN M+ Y + +
Sbjct: 265 MFFKMG--------------------------------KKSLVSWNVMIGVYMKNAMPVE 292
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A+E++ RM +G ++T VL A G+ +HG + + + + NALID
Sbjct: 293 AVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALID 352
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K C+ +A ++FE M+ +D+ SW ++++ + G + LF ++ +G PD +
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 339 FSTVLPACSHLAALMHGR 356
F T L ACSH L GR
Sbjct: 413 FVTTLAACSHAGLLEEGR 430
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/635 (33%), Positives = 348/635 (54%), Gaps = 66/635 (10%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNA--------- 104
+H+ ++++G + LI+ YSKC ++ VF+ + + N++T+N+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP-QRNIYTWNSVVTGLTKLG 100
Query: 105 ----------------------MISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIK 142
M+SGF +D + L +F M + G + ++Y+F ++
Sbjct: 101 FLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 143 CCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVL 202
C + + + ++H L+ K DVYIGSALV+ Y KC + +A +VF+E+ R+VV
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 203 WNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
WN+++ + Q G +AL+VF+ M + + T+ V+SA + K G+ VHG VV
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 263 KMG-YDSGVPVMNALIDMYGKGKCVGEALEIFE--------------------------- 294
K + + + NA +DMY K + EA IF+
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 295 ----MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
M E+++ SWN+++ + Q G ++ L LF + P +F+ +L AC+ LA
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
L G Q H +++ +G + DD+F+ N+L+DMY KCG + + +VF KM ++D
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSG--EEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN MI+G+ +G G EAL++F M E+ KPD +T +GVLSAC H+GF+ +GR +
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M +GV P +HYTC++D+LGRAG L EA + MP + + V+W +LLAA ++H N
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 531 LAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELK 590
L + A+++ ++EP + G YVL+SN+Y GK+E+V+++R +MR++ V K PGCSWI+++
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 591 DGLHTFISSDRSHPEAKSIYAELHSLTARLREHGD 625
H F+ D+SHP K I++ L L A +R D
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQD 673
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 239/529 (45%), Gaps = 98/529 (18%)
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F L D F L+ C ++ + V+ +H V K G +++I + L++ Y
Sbjct: 6 FLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAY 65
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS------------ 227
KC +E+ +VF+++P R++ WN++V G ++G +A +FR M
Sbjct: 66 SKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVS 125
Query: 228 -------------------KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
KEG ++ ++ VLSA + G VH ++ K + S
Sbjct: 126 GFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLS 185
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + +AL+DMY K V +A +F+ M ++++ SWNS++T EQ G L +F ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+ +PD VT ++V+ AC+ L+A+ G+++HG +V N +N D+ ++NA +DM
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN-------DIILSNAFVDM 298
Query: 389 YTKCGSMRDAQMV-------------------------------FTKMSKKDVASWNIMI 417
Y KC +++A+ + FTKM++++V SWN +I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 418 LGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC-----------SHSGFLSQGRE 466
GY +G+ +EAL +F + + P +F +L AC +H L G +
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 467 FLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA--ASR 524
F + G I +IDM + G + E Y L E + V W ++ A
Sbjct: 419 F------QSGEEDDIFVGNSLIDMYVKCGCVEEGY-LVFRKMMERDCVSWNAMIIGFAQN 471
Query: 525 LHGNTDLAEIAAQRVFQ--LEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+GN L +F+ LE G +++ M + A G V + RH
Sbjct: 472 GYGNEAL------ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH 514
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 200/418 (47%), Gaps = 47/418 (11%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L C+ ++ KG ++HS + ++ + ++L++MYSKC + A VF+ + + N
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRN 217
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V ++N++I+ F N A + LD F M + V PD+ T +I C + A+ +++HG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 159 LVFKLG-LDLDVYIGSALVNTYLKCQFMEEALKVFEELPL-------------------- 197
V K L D+ + +A V+ Y KC ++EA +F+ +P+
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 198 -----------RDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
R+VV WNA++ GY Q GE +AL +F + +E + + ++ +L A
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 247 MMGFFKNGRVVHGIVVKMGY------DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKD 300
+ G H V+K G+ + + V N+LIDMY K CV E +F M E+D
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 301 IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHG 360
SWN+++ Q G + L LF ML +G +PD +T VL AC H + GR
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRH--- 514
Query: 361 YIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
+ + ++ + D + ++D+ + G + +A+ + +M + D W ++
Sbjct: 515 --YFSSMTRDFGVAPLRDHY--TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLL 568
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 50/322 (15%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFV 89
TLA+ I++ CA + ++ GQE+H +++ + + + ++ + ++MY+KC ++K A F+
Sbjct: 255 TLASVISA---CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 90 FNNLS------------------------------CEPNVFTYNAMISGFYSNDFAFKGL 119
F+++ E NV ++NA+I+G+ N + L
Sbjct: 312 FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDV-------MAVLEVKKIHGLVFKLGLDLDVYIG 172
F +++ V P Y+F ++K C D+ A + V K HG F+ G + D+++G
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK-HGFKFQSGEEDDIFVG 430
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
++L++ Y+KC +EE VF ++ RD V WNAM+ G+AQ G ++ALE+FR M + G
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM----NALIDMYGKGKCVGE 288
T+ GVLSA GF + GR M D GV + ++D+ G+ + E
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGR---HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 289 ALEIFEMME-EKDIFSWNSIMT 309
A + E M + D W S++
Sbjct: 548 AKSMIEEMPMQPDSVIWGSLLA 569
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/586 (35%), Positives = 326/586 (55%), Gaps = 12/586 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C +L +G+E+H +++R G + +LI MY KC +K A +F+ + +
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP-RRD 261
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++NAMISG++ N +GL+ F MR L V PD T +I C + + IH
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
V G +D+ + ++L YL EA K+F + +D+V W M++GY K
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDK 381
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
A++ +R M ++ + TV VLSA +G G +H + +K S V V N LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K KC+ +AL+IF + K++ SW SI+ + N +F R + QP+ +T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIA-GLRLNNRCFEALIFLRQMKMTLQPNAIT 500
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
+ L AC+ + ALM G++IH +++ G+ +DD F+ NAL+DMY +CG M A
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVG-------LDD-FLPNALLDMYVRCGRMNTA 552
Query: 399 QMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHS 458
F KKDV SWNI++ GY GQG +++F M +++++PDE+TF+ +L CS S
Sbjct: 553 WSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKS 611
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
+ QG + ME YGV P ++HY CV+D+LGRAG+L EA++ MP +P VW
Sbjct: 612 QMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGA 670
Query: 519 LLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNV 578
LL A R+H DL E++AQ +F+L+ G Y+L+ N+Y GK+ EV +R M++ +
Sbjct: 671 LLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 579 RKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+ GCSW+E+K +H F+S D+ HP+ K I L ++ E G
Sbjct: 731 TVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/470 (29%), Positives = 247/470 (52%), Gaps = 18/470 (3%)
Query: 36 IASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI---TSLINMYSKCCQMKYALFVFNN 92
+A ++LC + ++G +++S L + S L + + + M+ + + A +VF
Sbjct: 98 VALVRLCEWKRAQEEGSKVYSIALSSM---SSLGVELGNAFLAMFVRFGNLVDAWYVFGK 154
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVL 151
+S E N+F++N ++ G+ + + + ++ M +G V PD YTFPC+++ C + +
Sbjct: 155 MS-ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
K++H V + G +LD+ + +AL+ Y+KC ++ A +F+ +P RD++ WNAM++GY
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
+ G H+ LE+F M + T+T V+SA ++G + GR +H V+ G+ +
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N+L MY EA ++F ME KDI SW ++++ +E D + + M
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
+PD +T + VL AC+ L L G ++H + L I V + N L++MY+K
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL--------ISYVIVANNLINMYSK 445
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
C + A +F + +K+V SW +I G ++ + EAL +F + L+P+ +T
Sbjct: 446 CKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAA 504
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
L+AC+ G L G+E + R GV ++DM R G++N A+
Sbjct: 505 LAACARIGALMCGKEIHAHV-LRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 219/423 (51%), Gaps = 13/423 (3%)
Query: 106 ISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ G +N + + N M++L V D+ F L++ C A E K++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
L V +G+A + +++ + +A VF ++ R++ WN +V GYA+ G F +A+ ++ R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 226 M-SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M G+ +T VL + G+ VH VV+ GY+ + V+NALI MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
V A +F+ M +DI SWN++++ + + G L LF M PDL+T ++V+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
AC L GR IH Y++ G A D+ + N+L MY GS R+A+ +F++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAV--------DISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M +KD+ SW MI GY + +A+D + M + +KPDE+T VLSAC+ G L G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 465 REFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
E L +++R ++ + +I+M + +++A ++ +P + N + W +++A
Sbjct: 418 VELHKLAIKAR--LISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSIIAGL 474
Query: 524 RLH 526
RL+
Sbjct: 475 RLN 477
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 193/394 (48%), Gaps = 27/394 (6%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TL + I++ +L + + G++IH+Y++ TG SL MY + A +F
Sbjct: 299 TLTSVISACELLGDR---RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
+ + ++ ++ MISG+ N K +D + M Q V PD+ T ++ C + +
Sbjct: 356 SRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDL 414
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++H L K L V + + L+N Y KC+ +++AL +F +P ++V+ W +++ G
Sbjct: 415 DTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGL 474
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK--MGYDS 268
+AL +F R K + + T+T L+A +G G+ +H V++ +G D
Sbjct: 475 RLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+P NAL+DMY + + A F ++KD+ SWN ++T + + G + LFDRM+
Sbjct: 534 FLP--NALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMV 590
Query: 329 SAGFQPDLVTFSTVLPACSH----LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNA 384
+ +PD +TF ++L CS LM+ ++ Y V L K+ +C
Sbjct: 591 KSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL-KHYAC----------- 638
Query: 385 LMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++D+ + G +++A KM D A W ++
Sbjct: 639 VVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 334/571 (58%), Gaps = 10/571 (1%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+ IH+ ++++G + + +SL+ MY+K + +L VF+ + E +V ++N +IS FY
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVISCFY 184
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ A K L+ F M G P+ + I C ++ + K+IH K G +LD Y
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ SALV+ Y KC +E A +VF+++P + +V WN+M+ GY G+ +E+ RM EG
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
S+ T+T +L A +G+ +HG V++ ++ + V +LID+Y K A
Sbjct: 305 TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAE 364
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
+F ++ SWN +++ + GN + ++D+M+S G +PD+VTF++VLPACS LA
Sbjct: 365 TVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLA 424
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
AL G+QIH L+ + S + D++ + +AL+DMY+KCG+ ++A +F + KKDV
Sbjct: 425 ALEKGKQIH-------LSISESRLETDELLL-SALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SW +MI YG GQ +EAL F M + LKPD VT + VLSAC H+G + +G +F
Sbjct: 477 VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQ 536
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA-NPVVWRTLLAASRLHGNT 529
M S+YG+ P IEHY+C+ID+LGRAG+L EAYE+ P + N + TL +A LH
Sbjct: 537 MRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEH 596
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
L + A+ + + P Y+++ N+Y +G ++ +R M++ +RK PGCSWIE+
Sbjct: 597 SLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
D + F + DRSH A+++Y L L+ +
Sbjct: 657 SDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
Score = 272 bits (696), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/514 (32%), Positives = 271/514 (52%), Gaps = 22/514 (4%)
Query: 39 LQLCAHQT-NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+ C + T +L++ + +H +L G+ + SLIN+Y C A VF N
Sbjct: 10 LRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRS 69
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV-LPDKYTFPCLIKCCCDVMAVLEVKKI 156
+V+ +N+++SG+ N L+ F + + +PD +TFP +IK + + I
Sbjct: 70 DVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMI 129
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H LV K G DV + S+LV Y K E +L+VF+E+P RDV WN +++ + Q GE
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEA 189
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
KALE+F RM G + ++T +SA + + + G+ +H VK G++ V +AL
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK C+ A E+F+ M K + +WNS++ + G+ + + +RM+ G +P
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQ 309
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYI---VVNGLAKNGSCKDIDDVFMNNALMDMYTKCG 393
T +++L ACS L+HG+ IHGY+ VVN D+++N +L+D+Y KCG
Sbjct: 310 TTLTSILMACSRSRNLLHGKFIHGYVIRSVVNA-----------DIYVNCSLIDLYFKCG 358
Query: 394 SMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLS 453
A+ VF+K K SWN+MI Y G +A++++ M +KPD VTF VL
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 454 ACSHSGFLSQGREF-LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACS L +G++ L + ESR + + ++DM + G EA+ + ++P + +
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELL--LSALLDMYSKCGNEKEAFRIFNSIPKK-D 475
Query: 513 PVVWRTLLAASRLHGNTD--LAEIAAQRVFQLEP 544
V W +++A HG L + + F L+P
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 32 LATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFN 91
+ T + L C+ L+KG++IH + + + L +++L++MYSKC K A +FN
Sbjct: 410 VVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFN 469
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
++ + +V ++ MIS + S+ + L F+ M++ G+ PD T ++ C +
Sbjct: 470 SIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 152 E-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
E +K + K G++ + S +++ + + EA ++ ++ P
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTP 574
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 319/600 (53%), Gaps = 17/600 (2%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
TLA+ + + C+ L +GQ++H+Y + G + +L+N+Y+KC ++ AL F
Sbjct: 391 TLASLVVA---CSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
E NV +N M+ + D F M+ ++P++YT+P ++K C + +
Sbjct: 448 LETEVE-NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
++IH + K L+ Y+ S L++ Y K ++ A + +DVV W M+ GY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
Q KAL FR+M GI +T +SA + K G+ +H G+ S +
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
P NAL+ +Y + + E+ FE E D +WN++++ +Q GN++ LR+F RM
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL-AKNGSCKDIDDVFMNNALMDMY 389
G + TF + + A S A + G+Q+H I G ++ C NAL+ MY
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC---------NALISMY 737
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFV 449
KCGS+ DA+ F ++S K+ SWN +I Y G G EALD F M + ++P+ VT V
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 450 GVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
GVLSACSH G + +G + M S YG+ P EHY CV+DML RAG L+ A E MP
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 510 EANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDI 569
+ + +VWRTLL+A +H N ++ E AA + +LEP YVL+SN+Y K++
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLT 917
Query: 570 RHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG---DC 626
R M+++ V+K PG SWIE+K+ +H+F D++HP A I+ LT R E G DC
Sbjct: 918 RQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC 977
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 240/499 (48%), Gaps = 14/499 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P+ ++ +++ C +L+ G+++H +L+ G +L+++Y + A
Sbjct: 288 PYAFSSVLSA---CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEH 344
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+N+S + + TYN +I+G + K ++ F M G+ PD T L+ C
Sbjct: 345 IFSNMS-QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ +++H KLG + I AL+N Y KC +E AL F E + +VVLWN M+
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
Y + + + +FR+M E I +++T +L I +G + G +H ++K +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V + LIDMY K + A +I KD+ SW +++ + Q D L F +ML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
G + D V + + AC+ L AL G+QIH V+G + D+ NAL+ +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS--------DLPFQNALVTL 635
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y++CG + ++ + F + D +WN ++ G+ G +EAL +F M + + TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ A S + + QG++ ++ ++ G E +I M + G +++A + L +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 509 NEANPVVWRTLLAASRLHG 527
+ N V W ++ A HG
Sbjct: 755 TK-NEVSWNAIINAYSKHG 772
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 236/489 (48%), Gaps = 15/489 (3%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++IH+ +L G+ DS + LI++YS+ + A VF+ L + + ++ AMISG
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVAMISGLSK 265
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N+ + + F M LG++P Y F ++ C + ++ +++HGLV KLG D Y+
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ALV+ Y + A +F + RD V +N ++NG +Q G KA+E+F+RM +G+
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALE 291
T+ ++ A G G+ +H K+G+ S + AL+++Y K + AL+
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 292 IFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAA 351
F E +++ WN ++ + + + R+F +M P+ T+ ++L C L
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 352 LMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVA 411
L G QIH I+ N ++ + L+DMY K G + A + + + KDV
Sbjct: 506 LELGEQIHSQIIKTNFQLNA--------YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 412 SWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLM 471
SW MI GY +AL F M + ++ DEV +SAC+ L +G++ +
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQ 616
Query: 472 ESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL 531
G + ++ + R G++ E+Y LA + + W L++ + GN +
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNE- 674
Query: 532 AEIAAQRVF 540
A RVF
Sbjct: 675 ---EALRVF 680
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 238/480 (49%), Gaps = 18/480 (3%)
Query: 47 NLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMI 106
+L +G+++HS +L+ G+ + L + Y + A VF+ + E +FT+N MI
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-ERTIFTWNKMI 158
Query: 107 SGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV-KKIHGLVFKLGL 165
S + + F M V P++ TF +++ C +V ++IH + GL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 166 DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRR 225
+ + L++ Y + F++ A +VF+ L L+D W AM++G ++ +A+ +F
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 226 MSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKC 285
M GI + + + VLSA + + G +HG+V+K+G+ S V NAL+ +Y
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN 338
Query: 286 VGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+ A IF M ++D ++N+++ QCG + + LF RM G +PD T ++++ A
Sbjct: 339 LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVA 398
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L G+Q+H Y G A N + AL+++Y KC + A F +
Sbjct: 399 CSADGTLFRGQQLHAYTTKLGFASNNK--------IEGALLNLYAKCADIETALDYFLET 450
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++V WN+M++ YG+ + + +F M ++ P++ T+ +L C G L G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 466 EF-LPLMESRYGVVPTIEHYTC--VIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ ++++ + + Y C +IDM + G+L+ A+++ + + + V W T++A
Sbjct: 511 QIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 100/221 (45%), Gaps = 11/221 (4%)
Query: 249 GFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY-GKGKCVGEALEIFEMMEEKDIFSWNSI 307
G GR +H ++K+G DS + L D Y KG G A ++F+ M E+ IF+WN +
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG-AFKVFDEMPERTIFTWNKM 157
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC-SHLAALMHGRQIHGYIVVNG 366
+ LF RM+S P+ TFS VL AC A QIH I+ G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L D + N L+D+Y++ G + A+ VF + KD +SW MI G +
Sbjct: 218 LR--------DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
EA+ +F M + P F VLSAC L G +
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/545 (35%), Positives = 315/545 (57%), Gaps = 17/545 (3%)
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + +VF++N++I+ + + + L F+ MR+L + P + +FPC IK C +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ K+ H F G D+++ SAL+ Y C +E+A KVF+E+P R++V W +M+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 209 GYAQIGEFHKALEVFRRM------SKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
GY G A+ +F+ + + +++ + V+SA + +H V+
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 263 KMGYDSGVPVMNALIDMYGKGK--CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGT 320
K G+D GV V N L+D Y KG V A +IF+ + +KD S+NSIM+V+ Q G +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 321 LRLFDRMLSAGFQP-DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
+F R++ + +T STVL A SH AL G+ IH ++ GL DDV
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLE--------DDV 322
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+ +++DMY KCG + A+ F +M K+V SW MI GYGM G +AL++F M ++
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
++P+ +TFV VL+ACSH+G +G + M+ R+GV P +EHY C++D+LGRAG L +
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AY+L M + + ++W +LLAA R+H N +LAEI+ R+F+L+ +CG Y+L+S+IY
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
G++++V +R M+ + + K PG S +EL +H F+ D HP+ + IY L L +
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 620 LREHG 624
L E G
Sbjct: 563 LLEAG 567
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 167/327 (51%), Gaps = 10/327 (3%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+++ C+ ++ G++ H G ++LI MYS C +++ A VF+ + +
Sbjct: 82 AIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP-KR 140
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHM------RQLGVLPDKYTFPCLIKCCCDVMAVL 151
N+ ++ +MI G+ N A + F + + D +I C V A
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF--MEEALKVFEELPLRDVVLWNAMVNG 209
+ IH V K G D V +G+ L++ Y K + A K+F+++ +D V +N++++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 210 YAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G ++A EVFRR+ K + + T++ VL A+ G + G+ +H V++MG +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
V V ++IDMY K V A + F+ M+ K++ SW +++ + G+ L LF M+
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 329 SAGFQPDLVTFSTVLPACSHLAALMHG 355
+G +P+ +TF +VL ACSH + G
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEG 407
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 99/185 (53%), Gaps = 7/185 (3%)
Query: 25 TFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMK 84
TFN TL+T + ++ +H L+ G+ IH ++R G+ D + TS+I+MY KC +++
Sbjct: 284 TFN-AITLSTVLLAV---SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 85 YALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCC 144
A F+ + NV ++ AMI+G+ + A K L+ F M GV P+ TF ++ C
Sbjct: 340 TARKAFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAAC 398
Query: 145 CDV-MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVL 202
+ V + + + + G++ + +V+ + F+++A + + + ++ D ++
Sbjct: 399 SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII 458
Query: 203 WNAMV 207
W++++
Sbjct: 459 WSSLL 463
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/645 (32%), Positives = 339/645 (52%), Gaps = 79/645 (12%)
Query: 50 KGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGF 109
K + H+ +L++G + LI YS A V ++ +P +++++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP-DPTIYSFSSLIYAL 91
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
+ + F+ M G++PD + P L K C ++ A K+IH + GLD+D
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ ++ + Y++C M +A KVF+ + +DVV +A++ YA+ G + + + M
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 230 GIWMSRFTVTGVLSALIMMGFFKN-----------------------------------G 254
GI + + G+LS G+ K G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGK-------------------GKC---------- 285
R++HG V+K G V++A+IDMYGK G C
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 286 --VGEALEIFEMMEEK----DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
V +ALE+FE+ +E+ ++ SW SI+ Q G L LF M AG +P+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
++LPAC ++AAL HGR HG+ V L +D+V + +AL+DMY KCG + +Q
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHL--------LDNVHVGSALIDMYAKCGRINLSQ 443
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSG 459
+VF M K++ WN ++ G+ M G+ KE + +F + +LKPD ++F +LSAC G
Sbjct: 444 IVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 460 FLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTL 519
+G ++ +M YG+ P +EHY+C++++LGRAG+L EAY+L MP E + VW L
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Query: 520 LAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVR 579
L + RL N DLAEIAA+++F LEP + G YVL+SNIY A G + EV IR+ M ++
Sbjct: 564 LNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLK 623
Query: 580 KNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
KNPGCSWI++K+ ++T ++ D+SHP+ I ++ ++ +R+ G
Sbjct: 624 KNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 166/381 (43%), Gaps = 69/381 (18%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
++CA + + G++IH +G+ S+ +MY +C +M A VF+ +S
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 95 ------------------------------CEPNVFTYNAMISGFYSNDFAFKGLDFFNH 124
E N+ ++N ++SGF + + + + F
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 125 MRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKC-- 182
+ LG PD+ T ++ D + + IHG V K GL D + SA+++ Y K
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 183 ---------QF--------------------MEEALKVFEELPLR----DVVLWNAMVNG 209
QF +++AL++FE + +VV W +++ G
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAG 362
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
AQ G+ +ALE+FR M G+ + T+ +L A + +GR HG V++
Sbjct: 363 CAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN 422
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V V +ALIDMY K + + +F MM K++ WNS+M G + +F+ ++
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMR 482
Query: 330 AGFQPDLVTFSTVLPACSHLA 350
+PD ++F+++L AC +
Sbjct: 483 TRLKPDFISFTSLLSACGQVG 503
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C + L G+ H + +R ++D+ ++LI+MY+KC ++ + VFN +
Sbjct: 390 TIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ N+ +N++++GF + A + + F + + + PD +F L+ C V E
Sbjct: 450 PTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 154 KKIHGLVF-KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
K ++ + G+ + S +VN + ++EA + +E+P D +W A++N
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLN 565
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/586 (34%), Positives = 330/586 (56%), Gaps = 11/586 (1%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
+L C+ N G++IH +++ G+ + P TSL++MYSKC + A VF+ + +
Sbjct: 277 GALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV-VD 335
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
+ +NAM++ + ND+ + LD F MRQ VLPD +T +I CC + K +
Sbjct: 336 KRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSV 395
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H +FK + I SAL+ Y KC +A VF+ + +D+V W ++++G + G+F
Sbjct: 396 HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKF 455
Query: 217 HKALEVFRRMSKE--GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMN 274
+AL+VF M + + +T V +A + + G VHG ++K G V V +
Sbjct: 456 KEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGS 515
Query: 275 ALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+LID+Y K AL++F M +++ +WNS+++ + + + ++ LF+ MLS G P
Sbjct: 516 SLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFP 575
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D V+ ++VL A S A+L+ G+ +HGY + G+ D + NAL+DMY KCG
Sbjct: 576 DSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPS--------DTHLKNALIDMYVKCGF 627
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
+ A+ +F KM K + +WN+MI GYG G AL +F M +A PD+VTF+ ++SA
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+HSGF+ +G+ M+ YG+ P +EHY ++D+LGRAG L EAY AMP EA+
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W LL+ASR H N +L ++A+++ ++EP YV + N+Y+ G E + M+
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
++ + K PGCSWIE+ D + F S S P I+ L+ L + +
Sbjct: 808 EKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 237/494 (47%), Gaps = 21/494 (4%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLS---- 94
L+ C+ TNL G+ IH ++ G P TSL+NMY KC + YA+ VF+ S
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 95 --CEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAV 150
+V +N+MI G++ +G+ F M GV PD ++ ++ C
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR 186
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNG 209
E K+IHG + + LD D ++ +AL++ Y K +A +VF E+ + +VVLWN M+ G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 210 YAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSG 269
+ G +L+++ + + + TG L A GR +H VVKMG +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 270 VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLS 329
V +L+ MY K VGEA +F + +K + WN+++ + + L LF M
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMY 389
PD T S V+ CS L +G+ +H + + + + +AL+ +Y
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST--------IESALLTLY 418
Query: 390 TKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC--EAKLKPDEVT 447
+KCG DA +VF M +KD+ +W +I G +G+ KEAL +F M + LKPD
Sbjct: 419 SKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDI 478
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
V +AC+ L G + M + G+V + + +ID+ + G A ++ +M
Sbjct: 479 MTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537
Query: 508 PNEANPVVWRTLLA 521
E N V W ++++
Sbjct: 538 STE-NMVAWNSMIS 550
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 206/401 (51%), Gaps = 26/401 (6%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE- 193
+TFP L+K C + + K IHG V LG D +I ++LVN Y+KC F++ A++VF+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 194 ------ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
+ RDV +WN+M++GY + F + + FRRM G+ F+++ V+S +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 248 MGFFK--NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSW 304
G F+ G+ +HG +++ D+ + ALIDMY K +A +F +E+K ++ W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 305 NSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV--TFSTVLPACSHLAALMHGRQIHGYI 362
N ++ G + +L L+ ML+ LV +F+ L ACS GRQIH +
Sbjct: 241 NVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
V GL +D ++ +L+ MY+KCG + +A+ VF+ + K + WN M+ Y
Sbjct: 299 VKMGLH--------NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF-LPLMESRYGVVPTI 481
+ G ALD+F M + + PD T V+S CS G + G+ L + TI
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 482 EHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
E + ++ + + G +AY + +M E + V W +L++
Sbjct: 411 E--SALLTLYSKCGCDPDAYLVFKSM-EEKDMVAWGSLISG 448
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 31/335 (9%)
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVV 262
N+ + Q GE+ +AL ++ + W S FT +L A + G+ +HG VV
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 263 KMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEE-------KDIFSWNSIMTVHEQCG 315
+G+ + +L++MY K + A+++F+ + +D+ WNS++ + +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMH--GRQIHGYIVVNGLAKNGSC 373
+ F RML G +PD + S V+ G+QIHG+++ N L
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT---- 203
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMILGYGMDGQGKEALDM 432
D F+ AL+DMY K G DA VF ++ K +V WN+MI+G+G G + +LD+
Sbjct: 204 ----DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH---YTC--V 487
+ +K +F G L ACS S GR+ VV H Y C +
Sbjct: 260 YMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI------HCDVVKMGLHNDPYVCTSL 313
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ M + G + EA E + + +W ++AA
Sbjct: 314 LSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAMVAA 347
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 341/656 (51%), Gaps = 64/656 (9%)
Query: 16 NFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLIN 75
+ S + N TF PF + C ++++ G+ H+ L TG I + +L+
Sbjct: 120 SLSWTPDNYTF--PFVF-------KACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170
Query: 76 MYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-RQLGVLPDK 134
MYS+C + A VF+ +S +V ++N++I + L+ F+ M + G PD
Sbjct: 171 MYSRCRSLSDARKVFDEMSVW-DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDN 229
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
T ++ C + K++H + ++++G+ LV+ Y KC M+EA VF
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM--------------------- 233
+ ++DVV WNAMV GY+QIG F A+ +F +M +E I M
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 234 --------------SRFTVTGVLSALIMMGFFKNGRVVHGIVVKM-------GYDSGVPV 272
+ T+ VLS +G +G+ +H +K G+ V
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 273 MNALIDMYGKGKCVGEALEIFEMM--EEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+N LIDMY K K V A +F+ + +E+D+ +W ++ + Q G+ + L L M
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 331 GFQ--PDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
Q P+ T S L AC+ LAAL G+QIH Y + N ++ +F++N L+DM
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ-------QNAVPLFVSNCLIDM 522
Query: 389 YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTF 448
Y KCGS+ DA++VF M K+ +W ++ GYGM G G+EAL +F M K D VT
Sbjct: 523 YAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTL 582
Query: 449 VGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMP 508
+ VL ACSHSG + QG E+ M++ +GV P EHY C++D+LGRAG+LN A L MP
Sbjct: 583 LVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMP 642
Query: 509 NEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLD 568
E PVVW L+ R+HG +L E AA+++ +L H G+Y L+SN+Y G++++V
Sbjct: 643 MEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTR 702
Query: 569 IRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
IR MR + V+K PGCSW+E G TF D++HP AK IY L R+++ G
Sbjct: 703 IRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIG 758
Score = 228 bits (582), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 253/519 (48%), Gaps = 52/519 (10%)
Query: 54 IHSYMLRTGIIDSPLSITS-LINMYSKCCQMKYALFVFNNLS-CEPNVFTYNAMISGFYS 111
IH +L GI+ L++TS LI+ Y + +A+ + + V+ +N++I +
Sbjct: 47 IHQKLLSFGILT--LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGD 104
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
N A K L F M L PD YTFP + K C ++ +V + H L G +V++
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 172 GSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE-G 230
G+ALV Y +C+ + +A KVF+E+ + DVV WN+++ YA++G+ ALE+F RM+ E G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
T+ VL +G G+ +H V + V N L+DMY K + EA
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDR------------------------ 326
+F M KD+ SWN+++ + Q G + +RLF++
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 327 -----------MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN--GLAKNGSC 373
MLS+G +P+ VT +VL C+ + ALMHG++IH Y + L KNG
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK--DVASWNIMILGYGMDGQGKEALD 431
D+ + N L+DMY KC + A+ +F +S K DV +W +MI GY G +AL+
Sbjct: 405 ---DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 432 MFSCMCE--AKLKPDEVTFVGVLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVI 488
+ S M E + +P+ T L AC+ L G++ + ++ VP C+I
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS-NCLI 520
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
DM + G +++A L N V W +L+ +HG
Sbjct: 521 DMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMHG 558
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 323/575 (56%), Gaps = 12/575 (2%)
Query: 53 EIHSYMLRTGIIDSPLSITS--LINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
++H++ ++ G +P S L+ Y + ++ A +F + E + T+N +I+G+
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIP-EKDSVTFNTLITGYE 226
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
+ + + F MRQ G P +TF ++K + +++H L G D
Sbjct: 227 KDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS 286
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G+ +++ Y K + E +F+E+P D V +N +++ Y+Q ++ +L FR M G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
F +LS + + GR +H + DS + V N+L+DMY K + EA
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
IF+ + ++ SW ++++ + Q G H L+LF +M + + D TF+TVL A + A
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 351 ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDV 410
+L+ G+Q+H +I+ +G ++++VF + L+DMY KCGS++DA VF +M ++
Sbjct: 467 SLLLGKQLHAFIIRSG--------NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 518
Query: 411 ASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPL 470
SWN +I + +G G+ A+ F+ M E+ L+PD V+ +GVL+ACSH GF+ QG E+
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQA 578
Query: 471 MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTD 530
M YG+ P +HY C++D+LGR G+ EA +L MP E + ++W ++L A R+H N
Sbjct: 579 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQS 638
Query: 531 LAEIAAQRVFQLEP-GHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LAE AA+++F +E YV MSNIY A G++E+V D++ MR++ ++K P SW+E+
Sbjct: 639 LAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+H F S+D++HP I +++ LTA + G
Sbjct: 699 NHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREG 733
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 234/469 (49%), Gaps = 15/469 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
+S ++I+ + K + A +F+ + + V T+ ++ + N + F M +
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMP-DRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 128 LG--VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY--IGSALVNTYLKCQ 183
LPD TF L+ C D + V ++H KLG D + + + + L+ +Y + +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 184 FMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLS 243
++ A +FEE+P +D V +N ++ GY + G + +++ +F +M + G S FT +GVL
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 244 ALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFS 303
A++ + F G+ +H + V G+ V N ++D Y K V E +F+ M E D S
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 304 WNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIV 363
+N +++ + Q ++ +L F M GF F+T+L ++L++L GRQ+H +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 364 VNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMD 423
LA S + + N+L+DMY KC +A+++F + ++ SW +I GY
Sbjct: 379 ---LATADSI-----LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 424 GQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEH 483
G L +F+ M + L+ D+ TF VL A + L G++ + R G + +
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI-IRSGNLENVFS 489
Query: 484 YTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ ++DM + G + +A ++ MP+ N V W L++A +G+ + A
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISAHADNGDGEAA 537
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 198/421 (47%), Gaps = 30/421 (7%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
GQ++H+ + TG +++ YSK ++ +F+ + E + +YN +IS +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYS 327
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
D L FF M+ +G + F ++ ++ ++ +++H D ++
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+G++LV+ Y KC+ EEA +F+ LP R V W A+++GY Q G L++F +M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ + T VL A G+ +H +++ G V + L+DMY K + +A+
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 291 EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLA 350
++FE M +++ SWN++++ H G+ + + F +M+ +G QPD V+ VL ACSH
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 351 ALMHG---------------RQIHGYIVVNGLAKNGSCKDID----------DVFMNNAL 385
+ G ++ H +++ L +NG + + D M +++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 386 MDM----YTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKL 441
++ + + R A+ +F+ +D A++ M Y G+ ++ D+ M E +
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 442 K 442
K
Sbjct: 688 K 688
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 191/456 (41%), Gaps = 67/456 (14%)
Query: 111 SNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVY 170
SN+ + L +RQ P TF L+ +++ + K G D D
Sbjct: 7 SNEVRSRTLATLRQLRQ----PSPATF-------------LDTRRVDARIIKTGFDTDTC 49
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ +V L+ + A KV++E+P ++ V N M++G+ + G+ A ++F M
Sbjct: 50 RSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRT 109
Query: 231 I--------WMSR-------------------------FTVTGVLSALIMMGFFKNGRVV 257
+ W +R T T +L V
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV 169
Query: 258 HGIVVKMGYDSG--VPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCG 315
H VK+G+D+ + V N L+ Y + + + A +FE + EKD ++N+++T +E+ G
Sbjct: 170 HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG 229
Query: 316 NHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKD 375
+ ++ LF +M +G QP TFS VL A L G+Q+H V G +++ S
Sbjct: 230 LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS--- 286
Query: 376 IDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSC 435
+ N ++D Y+K + + +M+F +M + D S+N++I Y Q + +L F
Sbjct: 287 -----VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 436 MCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY-TCVIDMLGRA 494
M F +LS ++ L GR+ ++ +I H ++DM +
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQL--HCQALLATADSILHVGNSLVDMYAKC 399
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAA---SRLHG 527
EA + ++P V W L++ LHG
Sbjct: 400 EMFEEAELIFKSLPQRTT-VSWTALISGYVQKGLHG 434
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 108/239 (45%), Gaps = 44/239 (18%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
+T L+ A +L G+++H++++R+G +++ S + L++MY+KC +K A+ VF
Sbjct: 453 STFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 93 LSCEPNVFTYNAMISGFYSN-----------------------------------DFAFK 117
+ + N ++NA+IS N F +
Sbjct: 513 MP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQ 571
Query: 118 GLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALV 176
G ++F M + G+ P K + C++ E +K L+ ++ + D + S+++
Sbjct: 572 GTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK---LMDEMPFEPDEIMWSSVL 628
Query: 177 NT--YLKCQFMEE--ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
N K Q + E A K+F LRD + +M N YA GE+ K +V + M + GI
Sbjct: 629 NACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/596 (33%), Positives = 334/596 (56%), Gaps = 18/596 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALF 88
+ L+T +++ C+ L+ G++IH+++LR G+ +D+ L + LI+ Y KC ++ A
Sbjct: 250 YILSTVLSA---CSILPFLEGGKQIHAHILRYGLEMDASL-MNVLIDSYVKCGRVIAAHK 305
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+FN + N+ ++ ++SG+ N + ++ F M + G+ PD Y ++ C +
Sbjct: 306 LFNGMP-NKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLH 364
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ ++H K L D Y+ ++L++ Y KC + +A KVF+ DVVL+NAM+
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 209 GYAQIG---EFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
GY+++G E H+AL +FR M I S T +L A + + +HG++ K G
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
+ + +ALID+Y C+ ++ +F+ M+ KD+ WNS+ + Q ++ L LF
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+ + +PD TF+ ++ A +LA++ G++ H ++ GL N ++ NAL
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNP--------YITNAL 596
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+DMY KCGS DA F + +DV WN +I Y G+GK+AL M M ++P+
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNY 656
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
+TFVGVLSACSH+G + G + LM R+G+ P EHY C++ +LGRAG+LN+A EL
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
MP + +VWR+LL+ GN +LAE AA+ +P G++ ++SNIY + G + E
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTE 775
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
+R M+ + V K PG SWI + +H F+S D+SH +A IY L L ++R
Sbjct: 776 AKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 245/495 (49%), Gaps = 27/495 (5%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGI-IDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
LQL A L +H ++ G+ +D+ LS LIN+YS+ M YA VF + E
Sbjct: 51 LQLRASDDLLHYQNVVHGQIIVWGLELDTYLS-NILINLYSRAGGMVYARKVFEKMP-ER 108
Query: 98 NVFTYNAMIS-----GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC--DVMAV 150
N+ +++ M+S G Y F R P++Y I+ C D
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVV----FLEFWRTRKDSPNEYILSSFIQACSGLDGRGR 164
Query: 151 LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGY 210
V ++ + K G D DVY+G+ L++ YLK ++ A VF+ LP + V W M++G
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
++G + +L++F ++ ++ + + ++ VLSA ++ F + G+ +H +++ G +
Sbjct: 225 VKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA 330
+MN LID Y K V A ++F M K+I SW ++++ ++Q H + LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 331 GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
G +PD+ S++L +C+ L AL G Q+H Y + L +D ++ N+L+DMY
Sbjct: 345 GLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG--------NDSYVTNSLIDMYA 396
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGY---GMDGQGKEALDMFSCMCEAKLKPDEVT 447
KC + DA+ VF + DV +N MI GY G + EAL++F M ++P +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAM 507
FV +L A + L ++ LM +YG+ I + +ID+ L ++ L
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLM-FKYGLNLDIFAGSALIDVYSNCYCLKDS-RLVFDE 514
Query: 508 PNEANPVVWRTLLAA 522
+ V+W ++ A
Sbjct: 515 MKVKDLVIWNSMFAG 529
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 335/593 (56%), Gaps = 13/593 (2%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I L +L GQ++H L+ G+ D L+++ SLINMY K + +A VF+N
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGL-DLMLTVSNSLINMYCKLRKFGFARTVFDN 375
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+S E ++ ++N++I+G N + + F + + G+ PD+YT ++K + L
Sbjct: 376 MS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 153 V-KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ K++H K+ D ++ +AL++ Y + + M+EA +FE D+V WNAM+ GY
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYT 493
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q + HK L++F M K+G FT+ V + G+ VH +K GYD +
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V + ++DMY K + A F+ + D +W ++++ + G + +F +M G
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 332 FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK 391
PD T +T+ A S L AL GRQIH N L N + +D F+ +L+DMY K
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHA----NALKLNCT----NDPFVGTSLVDMYAK 665
Query: 392 CGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGV 451
CGS+ DA +F ++ ++ +WN M++G G+GKE L +F M +KPD+VTF+GV
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 452 LSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEA 511
LSACSHSG +S+ + + M YG+ P IEHY+C+ D LGRAG + +A L +M EA
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 512 NPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRH 571
+ ++RTLLAA R+ G+T+ + A ++ +LEP YVL+SN+Y A K++E+ R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 572 TMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
M+ V+K+PG SWIE+K+ +H F+ DRS+ + + IY ++ + +++ G
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 211/416 (50%), Gaps = 24/416 (5%)
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNT 178
L F M + V D+ TF ++ V ++ +++H + KLGLDL + + ++L+N
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 179 YLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTV 238
Y K + A VF+ + RD++ WN+++ G AQ G +A+ +F ++ + G+ ++T+
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 239 TGVLSALIMM--GFFKNGRV-VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEM 295
T VL A + G + +V VH I + DS V ALID Y + +C+ EA +FE
Sbjct: 420 TSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS--TALIDAYSRNRCMKEAEILFE- 476
Query: 296 MEEKDIFSWNSIMTVHEQCGNHDG--TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
D+ +WN++M + Q +HDG TL+LF M G + D T +TV C L A+
Sbjct: 477 RHNFDLVAWNAMMAGYTQ--SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+Q+H Y + +G D+ D+++++ ++DMY KCG M AQ F + D +W
Sbjct: 535 QGKQVHAYAIKSGY-------DL-DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
MI G +G+ + A +FS M + PDE T + A S L QGR+ + +
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ---IHAN 643
Query: 474 RYGVVPTIEHY--TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ T + + T ++DM + G +++AY L N W +L HG
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCL-FKRIEMMNITAWNAMLVGLAQHG 698
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 131/563 (23%), Positives = 250/563 (44%), Gaps = 89/563 (15%)
Query: 46 TNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAM 105
++L G+ H+ +L I +LI+MYSKC + YA VF+ + + ++ ++N++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSI 111
Query: 106 ISGF-YSNDFAFKGLD----FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLV 160
++ + S++ + + F +RQ V + T ++K C V + HG
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 161 FKLGLDLDVYIGSALVN-------------------------------TYLKCQFMEEAL 189
K+GLD D ++ ALVN YL+ F EEA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 190 KVFE----------ELPLR----------------------------DVVLWNAMVNGYA 211
+ E+ LR +++ N ++ Y
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
G++ L+ F M + + + T +L+ + + G+ VH + +K+G D +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
V N+LI+MY K + G A +F+ M E+D+ SWNS++ Q G + LF ++L G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 332 FQPDLVTFSTVLPACSHLA-ALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
+PD T ++VL A S L L +Q+H + + ++ D F++ AL+D Y+
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI--------KINNVSDSFVSTALIDAYS 463
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+ M++A+++F + + D+ +WN M+ GY G + L +F+ M + + D+ T
Sbjct: 464 RNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 451 VLSACSHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPN 509
V C ++QG++ ++S Y + + + ++DM + G ++ A + A
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAA-QFAFDSIP 579
Query: 510 EANPVVWRTLLAASRLHGNTDLA 532
+ V W T+++ +G + A
Sbjct: 580 VPDDVAWTTMISGCIENGEEERA 602
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/557 (35%), Positives = 317/557 (56%), Gaps = 13/557 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G++ H+ +++ TSL+ MY K ++ L VF + E N +T++ M+SG+
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYA 195
Query: 111 SN---DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ + A K + F ++ G D Y F ++ + V ++IH + K GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
V + +ALV Y KC+ + EA K+F+ R+ + W+AMV GY+Q GE +A+++F RM
Sbjct: 255 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
GI S +T+ GVL+A + + + G+ +H ++K+G++ + AL+DMY K C+
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 374
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+A + F+ ++E+D+ W S+++ + Q +++ L L+ RM +AG P+ T ++VL ACS
Sbjct: 375 DARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
LA L G+Q+HG+ + +G +V + +AL MY+KCGS+ D +VF +
Sbjct: 435 SLATLELGKQVHGHTIKHGFGL--------EVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
KDV SWN MI G +GQG EAL++F M ++PD+VTFV ++SACSH GF+ +G +
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+M + G+ P ++HY C++D+L RAGQL EA E + + +WR LL+A + HG
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 528 NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWI 587
+L A +++ L YV +S IY A G+ +V + MR V K GCSWI
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Query: 588 ELKDGLHTFISSDRSHP 604
ELK+ H F+ D HP
Sbjct: 667 ELKNQYHVFVVGDTMHP 683
Score = 242 bits (618), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 265/515 (51%), Gaps = 19/515 (3%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQM 83
QT +P T +T + L + Q NL G+ +H ++RTG L+N Y+KC ++
Sbjct: 7 QTELNPHT-STLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 84 KYALFVFNNLSCEPNVFTYNAMISGFYSN---DFAFKGLDFFNHMRQLGVLPDKYTFPCL 140
A +FN + C+ +V ++N++I+G+ N ++ + F MR +LP+ YT +
Sbjct: 66 AKAHSIFNAIICK-DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 141 IKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV 200
K + + ++ H LV K+ D+Y+ ++LV Y K +E+ LKVF +P R+
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 201 VLWNAMVNGYAQIGEFHKALEVFR---RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVV 257
W+ MV+GYA G +A++VF R +EG S + T VLS+L + GR +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 258 HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH 317
H I +K G V + NAL+ MY K + + EA ++F+ +++ +W++++T + Q G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
++LF RM SAG +P T VL ACS + L G+Q+H +++ G ++
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH------- 356
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
+F AL+DMY K G + DA+ F + ++DVA W +I GY + +EAL ++ M
Sbjct: 357 -LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 438 EAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQL 497
A + P++ T VL ACS L G++ + ++G + + + M + G L
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQ-VHGHTIKHGFGLEVPIGSALSTMYSKCGSL 474
Query: 498 NEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
+ + PN+ + V W +++ +G D A
Sbjct: 475 EDGNLVFRRTPNK-DVVSWNAMISGLSHNGQGDEA 508
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 333/557 (59%), Gaps = 13/557 (2%)
Query: 71 TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV 130
T+LI Y + ++ A +F+ + + +V + AMI+G+ S+++ + + F+ M + G
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMP-DRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 131 LPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQF-MEEAL 189
P+++T ++K C ++ + +HG+V KLG++ +Y+ +A++N Y C ME A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 190 KVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMG 249
+F ++ +++ V W ++ G+ +G+ L+++++M E ++ + +T + A +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 250 FFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMT 309
G+ +H V+K G+ S +PVMN+++D+Y + + EA F ME+KD+ +WN++++
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 310 VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAK 369
E+ + + L +F R S GF P+ TF++++ AC+++AAL G+Q+HG I G K
Sbjct: 288 ELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 370 NGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKE 428
N V + NAL+DMY KCG++ D+Q VF ++ ++++ SW M++GYG G G E
Sbjct: 347 N--------VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 429 ALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVI 488
A+++F M + ++PD + F+ VLSAC H+G + +G ++ +MES YG+ P + Y CV+
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 489 DMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDL-AEIAAQRVFQLEPGHC 547
D+LGRAG++ EAYEL MP + + W +L A + H + L + +AA++V +L+P
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMV 518
Query: 548 GNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAK 607
G YV++S IY A GK+ + +R MR +K G SWI +++ + +F SD+ P A
Sbjct: 519 GTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNAS 578
Query: 608 SIYAELHSLTARLREHG 624
S+Y+ L L RE G
Sbjct: 579 SVYSVLGLLIEETREAG 595
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 180/358 (50%), Gaps = 11/358 (3%)
Query: 171 IGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+ + L+ +Y + +EEA +F+E+P RDVV W AM+ GYA +A E F M K+G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEAL 290
+ FT++ VL + M G +VHG+VVK+G + + V NA+++MY EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 291 -EIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
IF ++ K+ +W +++T G+ G L+++ +ML + + + A + +
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
++ G+QIH ++ G N + + N+++D+Y +CG + +A+ F +M KD
Sbjct: 227 DSVTTGKQIHASVIKRGFQSN--------LPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
+ +WN +I EAL MF P+ TF +++AC++ L+ G++
Sbjct: 279 LITWNTLISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHG 337
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
+ R G +E +IDM + G + ++ + + + N V W +++ HG
Sbjct: 338 RIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 201/407 (49%), Gaps = 17/407 (4%)
Query: 14 CFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
CF+ G T + FTL++ + S C + L G +H +++ G+ S ++
Sbjct: 98 CFHEMVKQG--TSPNEFTLSSVLKS---CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAM 152
Query: 74 INMYSKC-CQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLP 132
+NMY+ C M+ A +F ++ + +V T+ +I+GF GL + M
Sbjct: 153 MNMYATCSVTMEAACLIFRDIKVKNDV-TWTTLITGFTHLGDGIGGLKMYKQMLLENAEV 211
Query: 133 DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVF 192
Y ++ + +V K+IH V K G ++ + +++++ Y +C ++ EA F
Sbjct: 212 TPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYF 271
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
E+ +D++ WN +++ + + +AL +F+R +G + +T T +++A +
Sbjct: 272 HEMEDKDLITWNTLISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALN 330
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVH 311
G+ +HG + + G++ V + NALIDMY K + ++ +F E+++ +++ SW S+M +
Sbjct: 331 CGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGY 390
Query: 312 EQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNG 371
G + LFD+M+S+G +PD + F VL AC H + G + N +
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-----YFNVMESEY 445
Query: 372 SCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
D++ N ++D+ + G + +A + +M K D ++W ++
Sbjct: 446 GINPDRDIY--NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 101/209 (48%), Gaps = 5/209 (2%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
++S++ R + + F + +T + +A+ CA+ L GQ++H + R
Sbjct: 285 LISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAA---CANIAALNCGQQLHGRIFR 341
Query: 61 TGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLD 120
G + +LI+MY+KC + + VF + N+ ++ +M+ G+ S+ + + ++
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 121 FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE-VKKIHGLVFKLGLDLDVYIGSALVNTY 179
F+ M G+ PD+ F ++ C V + +K + + + G++ D I + +V+
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 180 LKCQFMEEALKVFEELPLR-DVVLWNAMV 207
+ + EA ++ E +P + D W A++
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAIL 490
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 362 bits (929), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 208/588 (35%), Positives = 336/588 (57%), Gaps = 15/588 (2%)
Query: 43 AHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFT 101
A + L+KG+E+H +++ TG++D + I L+NMY+KC + A VF ++ + +V +
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV-S 382
Query: 102 YNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVF 161
+N+MI+G N + ++ + MR+ +LP +T + C + ++IHG
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 162 KLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE-FHKAL 220
KLG+DL+V + +AL+ Y + ++ E K+F +P D V WN+++ A+ +A+
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
F + G ++R T + VLSA+ + F + G+ +HG+ +K NALI Y
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACY 562
Query: 281 GKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTF 339
GK + +IF M E +D +WNS+++ + L L ML G + D +
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY 622
Query: 340 STVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQ 399
+TVL A + +A L G ++H V L DV + +AL+DMY+KCG + A
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLE--------SDVVVGSALVDMYSKCGRLDYAL 674
Query: 400 MVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCM-CEAKLKPDEVTFVGVLSACSHS 458
F M ++ SWN MI GY GQG+EAL +F M + + PD VTFVGVLSACSH+
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 459 GFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRT 518
G L +G + M YG+ P IEH++C+ D+LGRAG+L++ + MP + N ++WRT
Sbjct: 735 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 519 LLAAS-RLHG-NTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+L A R +G +L + AA+ +FQLEP + NYVL+ N+Y AGG++E+++ R M+
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+V+K G SW+ +KDG+H F++ D+SHP+A IY +L L ++R+ G
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 22/490 (4%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYS 111
++I + ++G++ + L++ ++K + YA VFN + N T N ++ G
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR-NAVTLNGLMVGLVR 286
Query: 112 NDFAFKGLDFFNHMRQL-GVLPDKY-----TFPCLIKCCCDVMAVLEVKKIHGLVFKLGL 165
+ + F M + V P+ Y +FP + + + + +++HG V GL
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEY--SLAEEVGLKKGREVHGHVITTGL 344
Query: 166 -DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFR 224
D V IG+ LVN Y KC + +A +VF + +D V WN+M+ G Q G F +A+E ++
Sbjct: 345 VDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 225 RMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGK 284
M + I FT+ LS+ + + K G+ +HG +K+G D V V NAL+ +Y +
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 285 CVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNH-DGTLRLFDRMLSAGFQPDLVTFSTVL 343
+ E +IF M E D SWNSI+ + + F AG + + +TFS+VL
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 344 PACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFT 403
A S L+ G+QIHG + N +A D+ NAL+ Y KCG M + +F+
Sbjct: 525 SAVSSLSFGELGKQIHGLALKNNIA--------DEATTENALIACYGKCGEMDGCEKIFS 576
Query: 404 KMS-KKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
+M+ ++D +WN MI GY + +ALD+ M + + D + VLSA + L
Sbjct: 577 RMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLE 636
Query: 463 QGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+G E + R + + + ++DM + G+L+ A MP N W ++++
Sbjct: 637 RGME-VHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISG 694
Query: 523 SRLHGNTDLA 532
HG + A
Sbjct: 695 YARHGQGEEA 704
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 234/481 (48%), Gaps = 27/481 (5%)
Query: 55 HSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
HS + + + +LIN Y + A VF+ + N ++ ++SG+ N
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR-NCVSWACIVSGYSRNGE 82
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV--MAVLEVKKIHGLVFKLGLDLDVYIG 172
+ L F M + G+ ++Y F +++ C ++ + +L ++IHGL+FKL +D +
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 173 SALVNTYLKC-QFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGI 231
+ L++ Y KC + AL F ++ +++ V WN++++ Y+Q G+ A +F M +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 232 WMSRFTVTGVLSALIMMGFFKNGRVVHGI---VVKMGYDSGVPVMNALIDMYGKGKCVGE 288
+ +T +++ + + R++ I + K G + + V + L+ + K +
Sbjct: 203 RPTEYTFGSLVTTACSLT-EPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSY 261
Query: 289 ALEIFEMMEEKDIFSWNSIMT--VHEQCGNHDGTLRL-FDRMLSAGFQPDLVTFSTVLP- 344
A ++F ME ++ + N +M V ++ G L + + M+ + ++ S+ P
Sbjct: 262 ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS-FPE 320
Query: 345 -ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID-DVFMNNALMDMYTKCGSMRDAQMVF 402
+ + L GR++HG+++ GL +D V + N L++MY KCGS+ DA+ VF
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGL--------VDFMVGIGNGLVNMYAKCGSIADARRVF 372
Query: 403 TKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLS 462
M+ KD SWN MI G +G EA++ + M + P T + LS+C+ +
Sbjct: 373 YFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAK 432
Query: 463 QGREFLPLMES-RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLA 521
G++ ES + G+ + ++ + G LNE ++ +MP E + V W +++
Sbjct: 433 LGQQIHG--ESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIG 489
Query: 522 A 522
A
Sbjct: 490 A 490
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 224/488 (45%), Gaps = 33/488 (6%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCC-QMKYALFVFNNLSCEPNVFTYNAMISGF 109
G++IH M + + LI+MY KC + YAL F ++ + N ++N++IS +
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK-NSVSWNSIISVY 181
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA--VLEVKKIHGLVFKLGLDL 167
F+ M+ G P +YTF L+ C + V +++I + K GL
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
D+++GS LV+ + K + A KVF ++ R+ V N ++ G + +A ++F M+
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 228 KEGIWMSRFTVTGVLSALIMMGF----------FKNGRVVHGIVVKMG-YDSGVPVMNAL 276
S V+ +++ F K GR VHG V+ G D V + N L
Sbjct: 302 ------SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
++MY K + +A +F M +KD SWNS++T +Q G + + M P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGS 415
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T + L +C+ L G+QIHG + G+ N V ++NALM +Y + G +
Sbjct: 416 FTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN--------VSVSNALMTLYAETGYLN 467
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQG-KEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
+ + +F+ M + D SWN +I + EA+ F A K + +TF VLSA
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAV 527
Query: 456 SHSGFLSQGREFLPL-MESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
S F G++ L +++ T E+ +I G+ G+++ ++ M + V
Sbjct: 528 SSLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNV 585
Query: 515 VWRTLLAA 522
W ++++
Sbjct: 586 TWNSMISG 593
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 6/326 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSIT-SLINMYSKCCQMKYALFVFNN 92
T I+SL CA + GQ+IH L+ G ID +S++ +L+ +Y++ + +F++
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLG-IDLNVSVSNALMTLYAETGYLNECRKIFSS 475
Query: 93 LSCEPNVFTYNAMISGFYSNDFAF-KGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
+ E + ++N++I ++ + + + F + ++ G ++ TF ++ +
Sbjct: 476 MP-EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGY 210
K+IHGL K + + +AL+ Y KC M+ K+F + RD V WN+M++GY
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 211 AQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGV 270
KAL++ M + G + F VLSA + + G VH V+ +S V
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 271 PVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM-LS 329
V +AL+DMY K + AL F M ++ +SWNS+++ + + G + L+LF+ M L
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 330 AGFQPDLVTFSTVLPACSHLAALMHG 355
PD VTF VL ACSH L G
Sbjct: 715 GQTPPDHVTFVGVLSACSHAGLLEEG 740
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 16/210 (7%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F AT +++ A L++G E+H+ +R + + ++L++MYSKC ++ YAL
Sbjct: 620 FMYATVLSAF---ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLG-VLPDKYTFPCLIKCCCDVM 148
FN + N +++N+MISG+ + + L F M+ G PD TF ++ C
Sbjct: 677 FNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 149 AVLE-VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM 206
+ E K + GL + S + + + +++ E++P++ +V++W +
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTV 795
Query: 207 V------NGY-AQIGEFHKALEVFRRMSKE 229
+ NG A++G+ KA E+ ++ E
Sbjct: 796 LGACCRANGRKAELGK--KAAEMLFQLEPE 823
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 204/641 (31%), Positives = 349/641 (54%), Gaps = 17/641 (2%)
Query: 1 MLSKISRINPFSSC-FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
+L +SR + ++FS ++ FTL +L+ C + G+ IH ++
Sbjct: 31 LLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV---ALKACGELREVNYGEMIHGFVK 87
Query: 60 RTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ + S L + +SLI MY KC +M AL +F+ L +P++ T+++M+SGF N ++
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTWSSMVSGFEKNGSPYQA 146
Query: 119 LDFFNHMRQLG-VLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
++FF M V PD+ T L+ C + + +HG V + G D+ + ++L+N
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y K + +EA+ +F+ + +DV+ W+ ++ Y Q G +AL VF M +G + T
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVAT 266
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
V VL A + GR H + ++ G ++ V V AL+DMY K EA +F +
Sbjct: 267 VLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP 326
Query: 298 EKDIFSWNSIMTVHEQCGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGR 356
KD+ SW ++++ G ++ F ML +PD + VL +CS L L +
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK 386
Query: 357 QIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIM 416
H Y++ G N F+ +L+++Y++CGS+ +A VF ++ KD W +
Sbjct: 387 CFHSYVIKYGFDSNP--------FIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 438
Query: 417 ILGYGMDGQGKEALDMFSCMCEA-KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRY 475
I GYG+ G+G +AL+ F+ M ++ ++KP+EVTF+ +LSACSH+G + +G LM + Y
Sbjct: 439 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 498
Query: 476 GVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIA 535
+ P +EHY ++D+LGR G L+ A E+ MP P + TLL A R+H N ++AE
Sbjct: 499 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 558
Query: 536 AQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHT 595
A+++F+LE H G Y+LMSN+Y G++E V +R++++Q+ ++K S IE++ +H
Sbjct: 559 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHR 618
Query: 596 FISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLFDSDS 636
F++ D HPE + +Y L L ++E + C ++ DS
Sbjct: 619 FVADDELHPEKEPVYGLLKELDLHMKEDLENCVYFEYEGDS 659
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 182/343 (53%), Gaps = 12/343 (3%)
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
+A ++F E+ R + WN ++ ++ ++ + L F M ++ FT+ L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 247 MMGFFKNGRVVHGIVVK-MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWN 305
+ G ++HG V K + S + V ++LI MY K + EAL +F+ +E+ DI +W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 306 SIMTVHEQCGNHDGTLRLFDRM-LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV 364
S+++ E+ G+ + F RM +++ PD VT T++ AC+ L+ GR +HG+++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 365 NGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDG 424
G + +D+ + N+L++ Y K + ++A +F +++KDV SW+ +I Y +G
Sbjct: 192 RGFS--------NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 425 QGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY 484
EAL +F+ M + +P+ T + VL AC+ + L QGR+ L R G+ ++
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELA-IRKGLETEVKVS 302
Query: 485 TCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
T ++DM + EAY + +P + + V W L++ L+G
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNG 344
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
K S DA+ +F +M+K+ + WN ++ + Q +E L FS M + KPD T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 451 VLSAC 455
L AC
Sbjct: 66 ALKAC 70
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 360 bits (925), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 201/600 (33%), Positives = 333/600 (55%), Gaps = 11/600 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALFVFNN 92
T +++L C + + G+EIH+ +L++ S L + +LI MY++C +M A +
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
++ +V T+N++I G+ N + L+FF+ M G D+ + +I + +L
Sbjct: 346 MN-NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 404
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
++H V K G D ++ +G+ L++ Y KC + F + +D++ W ++ GYAQ
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
+ALE+FR ++K+ + + + +L A ++ + +H +++ G V +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-I 523
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
N L+D+YGK + +G A +FE ++ KD+ SW S+++ GN + LF RM+ G
Sbjct: 524 QNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGL 583
Query: 333 QPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKC 392
D V +L A + L+AL GR+IH Y++ G GS + A++DMY C
Sbjct: 584 SADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS--------IAVAVVDMYACC 635
Query: 393 GSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVL 452
G ++ A+ VF ++ +K + + MI YGM G GK A+++F M + PD ++F+ +L
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 453 SACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
ACSH+G L +GR FL +ME Y + P EHY C++DMLGRA + EA+E M E
Sbjct: 696 YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPT 755
Query: 513 PVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHT 572
VW LLAA R H ++ EIAAQR+ +LEP + GN VL+SN++ G++ +V +R
Sbjct: 756 AEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAK 815
Query: 573 MRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHGDCCAGTLF 632
M+ + K+PGCSWIE+ +H F + D+SHPE+K IY +L +T +L A T F
Sbjct: 816 MKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKF 875
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 228/473 (48%), Gaps = 11/473 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P L++ A L+ CA +++ G E+HS +++ G + + +L++MY+K + A
Sbjct: 179 PLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARR 238
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
+F+ + + +N+++S + ++ + + L+ F M G P+ YT + C
Sbjct: 239 LFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFS 298
Query: 149 AVLEVKKIHGLVFKLGL-DLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
K+IH V K ++Y+ +AL+ Y +C M +A ++ ++ DVV WN+++
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY Q + +ALE F M G ++T +++A + G +H V+K G+D
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
S + V N LIDMY K F M +KD+ SW +++ + Q H L LF +
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+ D + ++L A S L +++ ++IH +I+ GL D + N L+D
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL---------DTVIQNELVD 529
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
+Y KC +M A VF + KDV SW MI ++G EA+++F M E L D V
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEA 500
+ +LSA + L++GRE + R G V+DM G L A
Sbjct: 590 LLCILSAAASLSALNKGREIHCYL-LRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 250/497 (50%), Gaps = 15/497 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRT-GIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
L+LC + + +G+++HS + +T + L+ MY KC + A VF+ + +
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMP-DR 145
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
F +N MI + SN L + +MR GV +FP L+K C + + ++H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVNGYAQIGEF 216
L+ KLG +I +ALV+ Y K + A ++F+ + D VLWN++++ Y+ G+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNA 275
+ LE+FR M G + +T+ L+A + K G+ +H V+K + S + V NA
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LI MY + + +A I M D+ +WNS++ + Q + L F M++AG + D
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
V+ ++++ A L+ L+ G ++H Y++ +G N + + N L+DMY+KC
Sbjct: 386 EVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN--------LQVGNTLIDMYSKCNLT 437
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
F +M KD+ SW +I GY + EAL++F + + +++ DE+ +L A
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S + +E + R G++ T+ ++D+ G+ + A + ++ + + V
Sbjct: 498 SVLKSMLIVKE-IHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGK-DVVS 554
Query: 516 WRTLLAASRLHGNTDLA 532
W +++++S L+GN A
Sbjct: 555 WTSMISSSALNGNESEA 571
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 171/335 (51%), Gaps = 11/335 (3%)
Query: 136 TFPCLIKCCCDVMAVLEVKKIHGLVFKL--GLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
F +++ C AV + +++H +FK +LD ++ LV Y KC +++A KVF+
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+P R WN M+ Y GE AL ++ M EG+ + + +L A + ++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK-DIFSWNSIMTVHE 312
G +H ++VK+GY S ++NAL+ MY K + A +F+ +EK D WNSI++ +
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G TL LF M G P+ T + L AC + G++IH ++ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL-------KS 313
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
++++ NAL+ MYT+CG M A+ + +M+ DV +WN +I GY + KEAL+
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
FS M A K DEV+ +++A L G E
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 408
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 209/636 (32%), Positives = 337/636 (52%), Gaps = 49/636 (7%)
Query: 23 NQTFNHPFTLATCIASL-QLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM--YSK 79
N H F L + SL + C +L+ +I + M+ G+I P + + LI S+
Sbjct: 43 NWNSTHSFVLHNPLLSLLEKCKLLLHLK---QIQAQMIINGLILDPFASSRLIAFCALSE 99
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV---LPDKYT 136
+ Y++ + + PN+F++N I GF ++ + + M + G PD +T
Sbjct: 100 SRYLDYSVKILKGIE-NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFT 158
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
+P L K C D+ I G V KL L+L ++ +A ++ + C ME A KVF+E P
Sbjct: 159 YPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESP 218
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
+RD+V WN ++NGY +IGE KA+ V++ M EG+ T+ G++S+ M+G G+
Sbjct: 219 VRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
+ V + G +P++NAL+DM+ K + EA IF+ +E++ I SW ++++ + +CG
Sbjct: 279 FYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGL 338
Query: 317 HDGTLRLFD-------------------------------RMLSAGFQPDLVTFSTVLPA 345
D + +LFD M ++ +PD +T L A
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM 405
CS L AL G IH YI L+ N V + +L+DMY KCG++ +A VF +
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLN--------VALGTSLVDMYAKCGNISEALSVFHGI 450
Query: 406 SKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
++ ++ +I G + G A+ F+ M +A + PDE+TF+G+LSAC H G + GR
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
++ M+SR+ + P ++HY+ ++D+LGRAG L EA L +MP EA+ VW LL R+
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRM 570
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
HGN +L E AA+++ +L+P G YVL+ +Y +E+ R M ++ V K PGCS
Sbjct: 571 HGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
IE+ + FI D+S PE++ IY LH L +R
Sbjct: 631 SIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 330/600 (55%), Gaps = 18/600 (3%)
Query: 20 SSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK 79
SSG + FT + L CA +L+ G + HS +++ + + +L++MY+K
Sbjct: 421 SSGYNIDDFTFT-----SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 80 CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPC 139
C ++ A +F + C+ + T+N +I + ++ + D F M G++ D
Sbjct: 476 CGALEDARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAS 534
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+K C V + + K++H L K GLD D++ GS+L++ Y KC +++A KVF LP
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWS 594
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
VV NA++ GY+Q +A+ +F+ M G+ S T ++ A G HG
Sbjct: 595 VVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 260 IVVKMGYDS-GVPVMNALIDMYGKGKCVGEALEIF-EMMEEKDIFSWNSIMTVHEQCGNH 317
+ K G+ S G + +L+ MY + + EA +F E+ K I W +M+ H Q G +
Sbjct: 654 QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 318 DGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDID 377
+ L+ + M G PD TF TVL CS L++L GR IH I LA D+D
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIF--HLAH-----DLD 766
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKK-DVASWNIMILGYGMDGQGKEALDMFSCM 436
++ +N L+DMY KCG M+ + VF +M ++ +V SWN +I GY +G ++AL +F M
Sbjct: 767 EL-TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSM 825
Query: 437 CEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQ 496
++ + PDE+TF+GVL+ACSH+G +S GR+ +M +YG+ ++H C++D+LGR G
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 497 LNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNI 556
L EA + A + + +W +LL A R+HG+ EI+A+++ +LEP + YVL+SNI
Sbjct: 886 LQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNI 945
Query: 557 YVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
Y + G +E+ +R MR + V+K PG SWI+++ H F + D+SH E I L L
Sbjct: 946 YASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 238/462 (51%), Gaps = 14/462 (3%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQ 127
L+ ++IN Y + ++K A +F +S P+V +N MISG +++F +MR+
Sbjct: 262 LAFVTVINTYIRLGKLKDARLLFGEMS-SPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 128 LGVLPDKYTFPCLIKCCCDVMAVLEVK-KIHGLVFKLGLDLDVYIGSALVNTYLKCQFME 186
V + T ++ ++A L++ +H KLGL ++Y+GS+LV+ Y KC+ ME
Sbjct: 321 SSVKSTRSTLGSVLSAI-GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 187 EALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALI 246
A KVFE L ++ V WNAM+ GYA GE HK +E+F M G + FT T +LS
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 247 MMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNS 306
+ G H I++K + V NAL+DMY K + +A +IFE M ++D +WN+
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 307 IMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNG 366
I+ + Q N LF RM G D ++ L AC+H+ L G+Q+H V G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 367 LAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQG 426
L + D+ ++L+DMY+KCG ++DA+ VF+ + + V S N +I GY +
Sbjct: 560 LDR--------DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL- 610
Query: 427 KEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHY-T 485
+EA+ +F M + P E+TF ++ AC L+ G +F + R G E+
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLGI 669
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHG 527
++ M + + EA L + + + V+W +++ +G
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 257/509 (50%), Gaps = 21/509 (4%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
FN SS T + TL + ++++ + A NL G +H+ ++ G+ + +SL+
Sbjct: 316 FNMRKSSVKSTRS---TLGSVLSAIGIVA---NLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
+MYSKC +M+ A VF L + +VF +NAMI G+ N + K ++ F M+ G D
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+TF L+ C + + H ++ K L ++++G+ALV+ Y KC +E+A ++FE
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+ RD V WN ++ Y Q +A ++F+RM+ GI + L A + G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ VH + VK G D + ++LIDMY K + +A ++F + E + S N+++ + Q
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ- 607
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
N + + LF ML+ G P +TF+T++ AC +L G Q HG I G + G
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE-- 665
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK-KDVASWNIMILGYGMDGQGKEALDMF 433
++ +L+ MY M +A +F+++S K + W M+ G+ +G +EAL +
Sbjct: 666 -----YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFY 720
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT--CVIDML 491
M + PD+ TFV VL CS L +GR L+ + + ++ T +IDM
Sbjct: 721 KEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI---FHLAHDLDELTSNTLIDMY 777
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLL 520
+ G + + ++ M +N V W +L+
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/523 (28%), Positives = 254/523 (48%), Gaps = 50/523 (9%)
Query: 1 MLSKISRI-NPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYML 59
MLS S I P +F + NQ F + FT + +++ CA +TN++ G++IH M+
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST---CARETNVEFGRQIHCSMI 187
Query: 60 RTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGL 119
+ G+ + +L++MY+KC ++ A VF + +PN + + SG+ + +
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 120 DFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY 179
F MR G PD F +I NTY
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVI-----------------------------------NTY 271
Query: 180 LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVT 239
++ +++A +F E+ DVV WN M++G+ + G A+E F M K + +R T+
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 240 GVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEK 299
VLSA+ ++ G VVH +K+G S + V ++L+ MY K + + A ++FE +EEK
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 300 DIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIH 359
+ WN+++ + G + LF M S+G+ D TF+++L C+ L G Q H
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFH 451
Query: 360 GYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILG 419
I+ LAKN +F+ NAL+DMY KCG++ DA+ +F +M +D +WN +I
Sbjct: 452 SIIIKKKLAKN--------LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGS 503
Query: 420 YGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVP 479
Y D EA D+F M + D L AC+H L QG++ + + + G+
Sbjct: 504 YVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ-VHCLSVKCGLDR 562
Query: 480 TIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
+ + +IDM + G + +A ++ ++P E + V L+A
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG 604
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 219/475 (46%), Gaps = 47/475 (9%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
L+ G+ +HS L GI +++++Y+KC Q+ YA F+ L E +V +N+M+S
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLS 133
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
+ S K L F + + + P+K+TF ++ C V ++IH + K+GL+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+ Y G ALV+ Y KC + +A +VFE + + V W + +GY + G +A+ VF RM
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 228 KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVG 287
EG V++ I +G K+ R+
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARL------------------------------- 282
Query: 288 EALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACS 347
+F M D+ +WN +++ H + G + F M + + T +VL A
Sbjct: 283 ----LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIG 338
Query: 348 HLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSK 407
+A L G +H + GLA N +++ ++L+ MY+KC M A VF + +
Sbjct: 339 IVANLDLGLVVHAEAIKLGLASN--------IYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 408 KDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
K+ WN MI GY +G+ + +++F M + D+ TF +LS C+ S L G +F
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 468 LPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAA 522
++ + + + ++DM + G L +A ++ M + N V W T++ +
Sbjct: 451 HSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGS 503
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 137/309 (44%), Gaps = 25/309 (8%)
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G+ VH + +G DS + NA++D+Y K V A + F+ +E KD+ +WNS+++++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSS 137
Query: 314 CGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSC 373
G LR F + P+ TFS VL C+ + GRQIH ++ GL +N C
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 374 KDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMF 433
AL+DMY KC + DA+ VF + + W + GY G +EA+ +F
Sbjct: 198 --------GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVF 249
Query: 434 SCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGR 493
M + +PD + FV V++ G L R M S P + + +I G+
Sbjct: 250 ERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGK 304
Query: 494 AGQLNEAYELALAMPNEANPVVWRTL---LAASRLHGNTDLAEIAAQRVFQLEPGHCGNY 550
G A E M + TL L+A + N DL + +L
Sbjct: 305 RGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG------- 357
Query: 551 VLMSNIYVA 559
L SNIYV
Sbjct: 358 -LASNIYVG 365
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 298/485 (61%), Gaps = 8/485 (1%)
Query: 140 LIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD 199
+++ C AV+E K HG + ++ L+ DV + + L+N Y KC F+E A +VF+ + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 200 VVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+V WN M+ Y + +AL++F M EG S FT++ VLSA + + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+ VK D + V AL+D+Y K + +A+++FE M++K +W+S++ + Q N++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ R + + T S+V+ ACS+LAAL+ G+Q+H I +G N V
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN--------V 298
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
F+ ++ +DMY KCGS+R++ ++F+++ +K++ WN +I G+ + KE + +F M +
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 440 KLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNE 499
+ P+EVTF +LS C H+G + +GR F LM + YG+ P + HY+C++D+LGRAG L+E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 500 AYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVA 559
AYEL ++P + +W +LLA+ R++ N +LAE+AA+++F+LEP + GN+VL+SNIY A
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 560 GGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTAR 619
++EE+ R +R +V+K G SWI++KD +HTF + HP + I + L +L +
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 538
Query: 620 LREHG 624
R+ G
Sbjct: 539 FRKFG 543
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 174/319 (54%), Gaps = 1/319 (0%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQLCA + + + H ++R + + LIN YSKC ++ A VF+ + E +
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LERS 126
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ ++N MI + N + LD F MR G ++T ++ C LE KK+H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
L K +DL++Y+G+AL++ Y KC +++A++VFE + + V W++MV GY Q + +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
AL ++RR + + ++FT++ V+ A + G+ +H ++ K G+ S V V ++ +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + E+ IF ++EK++ WN+I++ + + LF++M G P+ VT
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 339 FSTVLPACSHLAALMHGRQ 357
FS++L C H + GR+
Sbjct: 367 FSSLLSVCGHTGLVEEGRR 385
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 149/308 (48%), Gaps = 10/308 (3%)
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+R V +L G + HG ++++ + V ++N LI+ Y K V A ++F
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ M E+ + SWN+++ ++ + L +F M + GF+ T S+VL AC +
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
+++H V +C D+ ++++ AL+D+Y KCG ++DA VF M K +W
Sbjct: 180 ECKKLHCLSV-------KTCIDL-NLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTW 231
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
+ M+ GY + +EAL ++ L+ ++ T V+ ACS+ L +G++ ++
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVI-C 290
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+ G + + +DM + G L E+Y + + E N +W T+++ H
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLELWNTIISGFAKHARPKEVM 349
Query: 534 IAAQRVFQ 541
I +++ Q
Sbjct: 350 ILFEKMQQ 357
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 336/640 (52%), Gaps = 53/640 (8%)
Query: 23 NQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQ 82
NQT P+ T L + +L G+ +H+ +++ + S +N+YSKC +
Sbjct: 2 NQT---PWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGR 58
Query: 83 MKYALFVFNNLSCEPNVFTYN-------------------------------AMISGFYS 111
+ YA F + EPNVF+YN +ISG+
Sbjct: 59 LSYARAAFYSTE-EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYAD 117
Query: 112 NDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYI 171
F + F MR+LG D +T LI CCD + + +K++H G D +
Sbjct: 118 ARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSV 175
Query: 172 GSALVNTYLKCQFMEEALKVFEEL-PLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEG 230
+A V Y K + EA+ VF + LRD V WN+M+ Y Q E KAL +++ M +G
Sbjct: 176 NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG 235
Query: 231 IWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK-GKCVG-- 287
+ FT+ VL+AL + GR HG ++K G+ V + LID Y K G C G
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 288 EALEIFEMMEEKDIFSWNSIMT---VHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLP 344
++ ++F+ + D+ WN++++ ++E+ + ++ F +M G +PD +F V
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELS--EEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 345 ACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTK 404
ACS+L++ +QIHG + + + N + +NNAL+ +Y K G+++DA+ VF +
Sbjct: 354 ACSNLSSPSQCKQIHGLAIKSHIPSN-------RISVNNALISLYYKSGNLQDARWVFDR 406
Query: 405 MSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQG 464
M + + S+N MI GY G G EAL ++ M ++ + P+++TFV VLSAC+H G + +G
Sbjct: 407 MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEG 466
Query: 465 REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASR 524
+E+ M+ + + P EHY+C+ID+LGRAG+L EA AMP + V W LL A R
Sbjct: 467 QEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACR 526
Query: 525 LHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGC 584
H N LAE AA + ++P YV+++N+Y K+EE+ +R +MR + +RK PGC
Sbjct: 527 KHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGC 586
Query: 585 SWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
SWIE+K H F++ D SHP + + L + ++++ G
Sbjct: 587 SWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVG 626
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/516 (34%), Positives = 295/516 (57%), Gaps = 11/516 (2%)
Query: 109 FYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLD 168
F SND + N + + D+ + L+K C +++ + +H + + D
Sbjct: 37 FPSNDLLLRTSS--NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHD 94
Query: 169 VYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
+ +G+ L+N Y KC +EEA KVFE++P RD V W +++GY+Q AL F +M +
Sbjct: 95 IVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGE 288
G + FT++ V+ A G +HG VK G+DS V V +AL+D+Y + + +
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 289 ALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
A +F+ +E ++ SWN+++ H + + L LF ML GF+P +++++ ACS
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 349 LAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKK 408
L G+ +H Y++ +G + F N L+DMY K GS+ DA+ +F +++K+
Sbjct: 275 TGFLEQGKWVHAYMIKSG--------EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
Query: 409 DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFL 468
DV SWN ++ Y G GKEA+ F M ++P+E++F+ VL+ACSHSG L +G +
Sbjct: 327 DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYY 386
Query: 469 PLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGN 528
LM+ + G+VP HY V+D+LGRAG LN A MP E +W+ LL A R+H N
Sbjct: 387 ELMK-KDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKN 445
Query: 529 TDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIE 588
T+L AA+ VF+L+P G +V++ NIY +GG++ + +R M++ V+K P CSW+E
Sbjct: 446 TELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Query: 589 LKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+++ +H F+++D HP+ + I + + A+++E G
Sbjct: 506 IENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 196/380 (51%), Gaps = 10/380 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C L +G+ +H+++L++ + +L+NMY+KC ++ A VF + + +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP-QRD 125
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
T+ +ISG+ +D L FFN M + G P+++T +IK ++HG
Sbjct: 126 FVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHK 218
K G D +V++GSAL++ Y + M++A VF+ L R+ V WNA++ G+A+ K
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 219 ALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALID 278
ALE+F+ M ++G S F+ + A GF + G+ VH ++K G N L+D
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 279 MYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVT 338
MY K + +A +IF+ + ++D+ SWNS++T + Q G + F+ M G +P+ ++
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 339 FSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDA 398
F +VL ACSH L G + + +G+ + + + ++D+ + G + A
Sbjct: 366 FLSVLTACSHSGLLDEGWHYYELMKKDGI--------VPEAWHYVTVVDLLGRAGDLNRA 417
Query: 399 QMVFTKMSKKDVAS-WNIMI 417
+M + A+ W ++
Sbjct: 418 LRFIEEMPIEPTAAIWKALL 437
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 137/293 (46%), Gaps = 10/293 (3%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSI-TSLINMYSKCCQMKYALF 88
FTL++ I + A + G ++H + ++ G DS + + ++L+++Y++ M A
Sbjct: 162 FTLSSVIKA---AAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+ L +V ++NA+I+G K L+ F M + G P +++ L C
Sbjct: 218 VFDALESRNDV-SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTG 276
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
+ + K +H + K G L + G+ L++ Y K + +A K+F+ L RDVV WN+++
Sbjct: 277 FLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLT 336
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
YAQ G +A+ F M + GI + + VL+A G G + ++ K G
Sbjct: 337 AYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVP 396
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGT 320
++D+ G+ + AL E M E W +++ C H T
Sbjct: 397 EAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA---CRMHKNT 446
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 191/584 (32%), Positives = 322/584 (55%), Gaps = 11/584 (1%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
++ CA +++ G+++H+ +++ ++ +LI MY + QM A VF + + +
Sbjct: 175 IKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-D 233
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVMAVLEVKKIH 157
+ +++++I+GF F F+ L M GV P++Y F +K C ++ +IH
Sbjct: 234 LISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
GL K L + G +L + Y +C F+ A +VF+++ D WN ++ G A G
Sbjct: 294 GLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYAD 353
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A+ VF +M G ++ +L A G +H ++K G+ + + V N+L+
Sbjct: 354 EAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLL 413
Query: 278 DMYGKGKCVGEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
MY + +FE D SWN+I+T Q LRLF ML + +PD
Sbjct: 414 TMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDH 473
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
+T +L C +++L G Q+H Y + GLA + F+ N L+DMY KCGS+
Sbjct: 474 ITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP--------EQFIKNGLIDMYAKCGSLG 525
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+ +F M +DV SW+ +I+GY G G+EAL +F M A ++P+ VTFVGVL+ACS
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS 585
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +G + M++ +G+ PT EH +CV+D+L RAG+LNEA M E + VVW
Sbjct: 586 HVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVW 645
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
+TLL+A + GN LA+ AA+ + +++P + +VL+ +++ + G +E +R +M++
Sbjct: 646 KTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+V+K PG SWIE++D +H F + D HPE IY LH++ +++
Sbjct: 706 DVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/568 (25%), Positives = 264/568 (46%), Gaps = 24/568 (4%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
F + N +F L T I+ + C+ +L +G++IH ++L + + +++M
Sbjct: 54 FDFAQKNSSFK--IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM 111
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
Y KC ++ A VF+ + E N+ +Y ++I+G+ N + + + M Q ++PD++
Sbjct: 112 YGKCGSLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
F +IK C V K++H V KL + +AL+ Y++ M +A +VF +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTG----VLSALIMMGFFK 252
++D++ W++++ G++Q+G +AL + M G++ + G S+L+ +
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDY-- 288
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G +HG+ +K +L DMY + + A +F+ +E D SWN I+
Sbjct: 289 -GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLA 347
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
G D + +F +M S+GF PD ++ ++L A + AL G QIH YI+ G
Sbjct: 348 NNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF----- 402
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKM-SKKDVASWNIMILGYGMDGQGKEALD 431
+ D+ + N+L+ MYT C + +F + D SWN ++ Q E L
Sbjct: 403 ---LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 432 MFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDML 491
+F M ++ +PD +T +L C L G + + + G+ P +IDM
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-VHCYSLKTGLAPEQFIKNGLIDMY 518
Query: 492 GRAGQLNEAYELALAMPNEANPVVWRTLLA--ASRLHGNTDLAEIAAQRVFQLEPGHCGN 549
+ G L +A + +M N + V W TL+ A G L + +EP H
Sbjct: 519 AKCGSLGQARRIFDSMDNR-DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV-T 576
Query: 550 YVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
+V + G EE L + TM+ ++
Sbjct: 577 FVGVLTACSHVGLVEEGLKLYATMQTEH 604
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 213/462 (46%), Gaps = 34/462 (7%)
Query: 92 NLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVL 151
N C+ N Y + F DFA K F +R T+ LI C ++
Sbjct: 39 NSLCKSNF--YREALEAF---DFAQKNSSFKIRLR---------TYISLICACSSSRSLA 84
Query: 152 EVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYA 211
+ +KIH + D + + +++ Y KC + +A +VF+ +P R++V + +++ GY+
Sbjct: 85 QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYS 144
Query: 212 QIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVP 271
Q G+ +A+ ++ +M +E + +F ++ A G+ +H V+K+ S +
Sbjct: 145 QNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLI 204
Query: 272 VMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
NALI MY + + +A +F + KD+ SW+SI+ Q G L MLS G
Sbjct: 205 AQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFG 264
Query: 332 -FQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYT 390
F P+ F + L ACS L +G QIHG + + LA N +L DMY
Sbjct: 265 VFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA--------IAGCSLCDMYA 316
Query: 391 KCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVG 450
+CG + A+ VF ++ + D ASWN++I G +G EA+ +FS M + PD ++
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 451 VLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNE 510
+L A + LSQG + + ++G + + ++ M L + L N
Sbjct: 377 LLCAQTKPMALSQGMQIHSYI-IKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN 435
Query: 511 ANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL------EPGH 546
A+ V W T+L A H + R+F+L EP H
Sbjct: 436 ADSVSWNTILTACLQHEQP----VEMLRLFKLMLVSECEPDH 473
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 313/571 (54%), Gaps = 9/571 (1%)
Query: 54 IHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSND 113
+HS +++ G + +LIN YS C + A VF + C+ ++ + ++S + N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVENG 226
Query: 114 FAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGS 173
+ L + MR G +P+ YTF +K + A K +HG + K LD +G
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 174 ALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWM 233
L+ Y + M +A KVF E+P DVV W+ M+ + Q G ++A+++F RM + +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ FT++ +L+ + G +HG+VVK+G+D + V NALID+Y K + + A+++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ K+ SWN+++ +E G +F L VTFS+ L AC+ LA++
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G Q+HG + AK V ++N+L+DMY KCG ++ AQ VF +M DVASW
Sbjct: 467 LGVQVHGLAIKTNNAKK--------VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASW 518
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMES 473
N +I GY G G++AL + M + KP+ +TF+GVLS CS++G + QG+E M
Sbjct: 519 NALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR 578
Query: 474 RYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAE 533
+G+ P +EHYTC++ +LGR+GQL++A +L +P E + ++WR +L+AS N + A
Sbjct: 579 DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Query: 534 IAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGL 593
+A+ + ++ P YVL+SN+Y ++ V IR +M++ V+K PG SWIE + +
Sbjct: 639 RSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDV 698
Query: 594 HTFISSDRSHPEAKSIYAELHSLTARLREHG 624
H F HP+ K I L L + G
Sbjct: 699 HYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 229/494 (46%), Gaps = 21/494 (4%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L+ C + + + IH +L+ G + L+N Y K K AL +F+ + E
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMP-E 112
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
N ++ + G+ D + ++ + + G + + F +K + +
Sbjct: 113 RNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
H + KLG D + ++G+AL+N Y C ++ A VFE + +D+V+W +V+ Y + G F
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+L++ M G + +T L A I +G F + VHG ++K Y V L
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ +Y + + +A ++F M + D+ W+ ++ Q G + + LF RM A P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S++L C+ G Q+HG +V G D+ D++++NAL+D+Y KC M
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGF-------DL-DIYVSNALIDVYAKCEKMD 400
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A +F ++S K+ SWN +I+GY G+G +A MF ++ EVTF L AC+
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV-- 514
+ G + L + + +IDM + G + + A ++ NE +
Sbjct: 461 SLASMDLGVQVHGL-AIKTNNAKKVAVSNSLIDMYAKCGDI----KFAQSVFNEMETIDV 515
Query: 515 -VWRTLLAASRLHG 527
W L++ HG
Sbjct: 516 ASWNALISGYSTHG 529
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 16/393 (4%)
Query: 130 VLP--DKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE 187
++P D + + +++ C + K IH + K G LD++ + L+N Y+K F ++
Sbjct: 43 IIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD 102
Query: 188 ALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIM 247
AL +F+E+P R+ V + + GYA + ++ R+ +EG ++ T L +
Sbjct: 103 ALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 248 MGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSI 307
+ + +H +VK+GYDS V ALI+ Y V A +FE + KDI W I
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 308 MTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGL 367
++ + + G + +L+L M AGF P+ TF T L A L A + +HG I+
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL---- 274
Query: 368 AKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGK 427
+C +D + L+ +YT+ G M DA VF +M K DV W+ MI + +G
Sbjct: 275 ---KTCYVLDPR-VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 428 EALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCV 487
EA+D+F M EA + P+E T +L+ C+ G + L+ + G I +
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV-VKVGFDLDIYVSNAL 389
Query: 488 IDMLGRAGQLNEAYELALAMPNEANPVVWRTLL 520
ID+ + +++ A +L A + N V W T++
Sbjct: 390 IDVYAKCEKMDTAVKL-FAELSSKNEVSWNTVI 421
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 99/203 (48%), Gaps = 8/203 (3%)
Query: 31 TLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVF 90
T T ++L CA ++ G ++H ++T SLI+MY+KC +K+A VF
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 91 NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAV 150
N + +V ++NA+ISG+ ++ + L + M+ P+ TF ++ C + +
Sbjct: 508 NEME-TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 151 LEVKK-IHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAMVN 208
+ ++ ++ G++ + + +V + +++A+K+ E +P V++W AM++
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 209 GYAQIGEFHKALEVFRRMSKEGI 231
++ E F R S E I
Sbjct: 627 -----ASMNQNNEEFARRSAEEI 644
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 351 bits (901), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 330/645 (51%), Gaps = 50/645 (7%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L CA G +IH +++ G SL++ Y++C ++ A VF+ +S E N
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ERN 199
Query: 99 VFTYNAMISGFYSNDFAFKGLD-FFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
V ++ +MI G+ DFA +D FF +R V P+ T C+I C + + +K++
Sbjct: 200 VVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ G++++ + SALV+ Y+KC ++ A ++F+E ++ L NAM + Y + G
Sbjct: 260 AFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTR 319
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+AL VF M G+ R ++ +S+ + G+ HG V++ G++S + NALI
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSA------- 330
DMY K A IF+ M K + +WNSI+ + + G D F+ M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 331 -------------------------GFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVN 365
G D VT ++ AC HL AL + I+ YI N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 366 GLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQ 425
G+ DV + L+DM+++CG A +F ++ +DV++W I M G
Sbjct: 500 GIQL--------DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGN 551
Query: 426 GKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYT 485
+ A+++F M E LKPD V FVG L+ACSH G + QG+E M +GV P HY
Sbjct: 552 AERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG 611
Query: 486 CVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPG 545
C++D+LGRAG L EA +L MP E N V+W +LLAA R+ GN ++A AA+++ L P
Sbjct: 612 CMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPE 671
Query: 546 HCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPE 605
G+YVL+SN+Y + G++ ++ +R +M+++ +RK PG S I+++ H F S D SHPE
Sbjct: 672 RTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Query: 606 AKSIYAELHSLTARLREHGDC--CAGTLFDSDSTASGFEKHRLYL 648
+I A L ++ R G + L D D EK ++++
Sbjct: 732 MPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD------EKEKIFM 770
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 253/549 (46%), Gaps = 56/549 (10%)
Query: 1 MLSKISRINPFSSCFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLR 60
ML + ++P +T++ N +SL+ C L+ H + +
Sbjct: 3 MLGNVLHLSPM--VLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKM---FHRSLTK 57
Query: 61 TGIIDSPLSITSLINMYSKCCQM------KYALFVFNNLSCEPNVFTYNAMISGFYSNDF 114
G+ + +IT L+ ++ C++ +A VF N F YN++I G+ S+
Sbjct: 58 QGLDNDVSTITKLV---ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGL 114
Query: 115 AFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSA 174
+ + F M G+ PDKYTFP + C A +IHGL+ K+G D+++ ++
Sbjct: 115 CNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNS 174
Query: 175 LVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK-EGIWM 233
LV+ Y +C ++ A KVF+E+ R+VV W +M+ GYA+ A+++F RM + E +
Sbjct: 175 LVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTP 234
Query: 234 SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIF 293
+ T+ V+SA + + G V+ + G + +++AL+DMY K + A +F
Sbjct: 235 NSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Query: 294 EMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALM 353
+ ++ N++ + + + G L +F+ M+ +G +PD ++ + + +CS L ++
Sbjct: 295 DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 354 HGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASW 413
G+ HGY++ NG + D++ NAL+DMY KC A +F +MS K V +W
Sbjct: 355 WGKSCHGYVLRNGF------ESWDNIC--NALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 414 NIMILGYGMDGQGKEALDMFSCMCEAKL-------------------------------- 441
N ++ GY +G+ A + F M E +
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 442 KPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAY 501
D VT + + SAC H G L + +E + G+ + T ++DM R G A
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTTLVDMFSRCGDPESAM 525
Query: 502 ELALAMPNE 510
+ ++ N
Sbjct: 526 SIFNSLTNR 534
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 33/357 (9%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + CA +L+ G+++++++ +GI + L +++L++MY KC + A +F+
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
N+ NAM S + + L FN M GV PD+ + I C + +L
Sbjct: 298 GAS-NLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
K HG V + G + I +AL++ Y+KC + A ++F+ + + VV WN++V GY +
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 214 GE-------------------------------FHKALEVFRRM-SKEGIWMSRFTVTGV 241
GE F +A+EVF M S+EG+ T+ +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 242 LSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDI 301
SA +G + ++ + K G V + L+DM+ + A+ IF + +D+
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 302 FSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQI 358
+W + + GN + + LFD M+ G +PD V F L ACSH + G++I
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 211/447 (47%), Gaps = 27/447 (6%)
Query: 138 PCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEE---ALKVFEE 194
P +K C + E+K H + K GLD DV + LV + E A +VFE
Sbjct: 36 PSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 195 LPLRDV-VLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
++N+++ GYA G ++A+ +F RM GI ++T LSA N
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 254 GRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQ 313
G +HG++VKMGY + V N+L+ Y + + A ++F+ M E+++ SW S++ + +
Sbjct: 153 GIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 314 CGNHDGTLRLFDRML-SAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ LF RM+ P+ VT V+ AC+ L L G +++ +I +G+ N
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND- 271
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDM 432
M +AL+DMY KC ++ A+ +F + ++ N M Y G +EAL +
Sbjct: 272 -------LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 433 FSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLG 492
F+ M ++ ++PD ++ + +S+CS + G+ + R G +IDM
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFESWDNICNALIDMYM 383
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
+ + + A+ + M N+ V W +++A +G D AA F+ P N V
Sbjct: 384 KCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVD----AAWETFETMPEK--NIVS 436
Query: 553 MSNI---YVAGGKYEEVLDIRHTMRQQ 576
+ I V G +EE +++ +M+ Q
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQ 463
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/600 (32%), Positives = 330/600 (55%), Gaps = 17/600 (2%)
Query: 29 PFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALF 88
P ++ L++C + +G ++H Y+L++G + ++ LI+MY KC + A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 89 VFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVM 148
VF+++ E NV +++A++SG N L F+ M + G+ P+++TF +K C +
Sbjct: 63 VFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
A+ + +IHG K+G ++ V +G++LV+ Y KC + EA KVF + R ++ WNAM+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWM--SRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGY 266
G+ G KAL+ F M + I FT+T +L A G G+ +HG +V+ G+
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 267 --DSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLF 324
S + +L+D+Y K + A + F+ ++EK + SW+S++ + Q G + LF
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 325 DRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVV--NGLAKNGSCKDIDDVFMN 382
R+ Q D S+++ + A L G+Q+ V +GL + +
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL----------ETSVL 351
Query: 383 NALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLK 442
N+++DMY KCG + +A+ F +M KDV SW ++I GYG G GK+++ +F M ++
Sbjct: 352 NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Query: 443 PDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYE 502
PDEV ++ VLSACSHSG + +G E + +G+ P +EHY CV+D+LGRAG+L EA
Sbjct: 412 PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKH 471
Query: 503 LALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGK 562
L MP + N +W+TLL+ R+HG+ +L + + + +++ + NYV+MSN+Y G
Sbjct: 472 LIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGY 531
Query: 563 YEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ E + R + ++K G SW+E++ +H F S + SHP I L RLRE
Sbjct: 532 WNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLRE 591
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 207/406 (50%), Gaps = 16/406 (3%)
Query: 17 FSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINM 76
FS + + FT +T +L+ C L+KG +IH + L+ G SL++M
Sbjct: 95 FSEMGRQGIYPNEFTFST---NLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 151
Query: 77 YSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGV--LPDK 134
YSKC ++ A VF + + ++ ++NAMI+GF + K LD F M++ + PD+
Sbjct: 152 YSKCGRINEAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL--DVYIGSALVNTYLKCQFMEEALKVF 192
+T L+K C + K+IHG + + G I +LV+ Y+KC ++ A K F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 193 EELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFK 252
+++ + ++ W++++ GYAQ GEF +A+ +F+R+ + + F ++ ++ +
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 253 NGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHE 312
G+ + + VK+ V+N+++DMY K V EA + F M+ KD+ SW ++T +
Sbjct: 331 QGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 313 QCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGS 372
+ G ++R+F ML +PD V + VL ACSH + G ++ + L +G
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL----LETHGI 446
Query: 373 CKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
++ ++D+ + G +++A+ + M K +V W ++
Sbjct: 447 KPRVEHY---ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/552 (34%), Positives = 318/552 (57%), Gaps = 11/552 (1%)
Query: 38 SLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEP 97
+L+ C +L G++IH +++ D+ + +T L++MY+KC ++K A VFN+++
Sbjct: 148 ALKACTELQDLDNGKKIHCQLVKVPSFDNVV-LTGLLDMYAKCGEIKSAHKVFNDITLR- 205
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
NV + +MI+G+ ND +GL FN MR+ VL ++YT+ LI C + A+ + K H
Sbjct: 206 NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
G + K G++L + ++L++ Y+KC + A +VF E D+V+W AM+ GY G +
Sbjct: 266 GCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVN 325
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+AL +F++M I + T+ VLS ++ + GR VHG+ +K+G +D+ V NAL
Sbjct: 326 EALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVA--NAL 383
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+ MY K +A +FEM EKDI +WNSI++ Q G+ L LF RM S P+
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
VT +++ AC+ L +L G +H Y V G + S V + AL+D Y KCG +
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSS------VHVGTALLDFYAKCGDPQ 497
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
A+++F + +K+ +W+ MI GYG G +L++F M + + KP+E TF +LSAC
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACG 557
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H+G +++G+++ M Y P+ +HYTC++DML RAG+L +A ++ MP + + +
Sbjct: 558 HTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCF 617
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L +H DL EI +++ L P YVL+SN+Y + G++ + ++R+ M+Q+
Sbjct: 618 GAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQR 677
Query: 577 NVRKNPGCSWIE 588
+ K G S +E
Sbjct: 678 GLSKIAGHSTME 689
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 233/504 (46%), Gaps = 18/504 (3%)
Query: 28 HPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYAL 87
H + C L C TN+ ++ H + G++ T L+++Y K A
Sbjct: 40 HYAASSPCFLLLSKC---TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDAR 96
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
VF+ + EP+ + + M+ + N + + + ++ + + G D F +K C ++
Sbjct: 97 LVFDQIP-EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMV 207
+ KKIH + K+ D + + L++ Y KC ++ A KVF ++ LR+VV W +M+
Sbjct: 156 QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 208 NGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYD 267
GY + + L +F RM + + + +T ++ A + G+ HG +VK G +
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 268 SGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRM 327
++ +L+DMY K + A +F D+ W +++ + G+ + L LF +M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 328 LSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMD 387
+P+ VT ++VL C + L GR +HG + G I D + NAL+
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG---------IWDTNVANALVH 385
Query: 388 MYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVT 447
MY KC RDA+ VF S+KD+ +WN +I G+ +G EAL +F M + P+ VT
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 448 FVGVLSACSHSGFLSQGREFLPLMESRYGVVP--TIEHYTCVIDMLGRAGQLNEAYELAL 505
+ SAC+ G L+ G L + G + ++ T ++D + G A L
Sbjct: 446 VASLFSACASLGSLAVGSS-LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIF 503
Query: 506 AMPNEANPVVWRTLLAASRLHGNT 529
E N + W ++ G+T
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDT 527
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 338/588 (57%), Gaps = 14/588 (2%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
L+ C + ++ + I ++ML++G + +S + L++ KC + YA VF+ +S E +
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGMS-ERH 129
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
+ T+N++I+ + + + ++ + M VLPD+YT + K D+ E ++ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 159 LVFKLGLDL-DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
L LGL++ +V++GSALV+ Y+K EA V + + +DVVL A++ GY+Q GE
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
+A++ F+ M E + + +T VL + + NG+++HG++VK G++S + +L+
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 278 DMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLV 337
MY + V ++L +F+ +E + SW S+++ Q G + L F +M+ +P+
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSF 369
Query: 338 TFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRD 397
T S+ L CS+LA GRQIHG + G + D + + L+D+Y KCG
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR--------DKYAGSGLIDLYGKCGCSDM 421
Query: 398 AQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSH 457
A++VF +S+ DV S N MI Y +G G+EALD+F M L+P++VT + VL AC++
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 458 SGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWR 517
S + +G E + ++ T +HY C++D+LGRAG+L EA L + N + V+WR
Sbjct: 482 SRLVEEGCELFDSFR-KDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVIN-PDLVLWR 539
Query: 518 TLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQN 577
TLL+A ++H ++AE +++ ++EPG G +LMSN+Y + GK+ V++++ M+
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 578 VRKNPGCSWIELKDGLHTFISSDR-SHPEAKSIYAELHSLTARLREHG 624
++KNP SW+E+ HTF++ D SHP ++ I L L + ++ G
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLG 647
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/582 (33%), Positives = 315/582 (54%), Gaps = 21/582 (3%)
Query: 39 LQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPN 98
LQ NL + +++H+ ++R + + LI+ S C Q A+ VFN + EPN
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ-EPN 81
Query: 99 VFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHG 158
V N++I N ++ F+ M++ G+ D +T+P L+K C + VK +H
Sbjct: 82 VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN 141
Query: 159 LVFKLGLDLDVYIGSALVNTYLKCQFM--EEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
+ KLGL D+Y+ +AL++ Y +C + +A+K+FE++ RD V WN+M+ G + GE
Sbjct: 142 HIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
A +F M + + + G M F+ + KM + V + +
Sbjct: 202 RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFE-------LFEKMPERNTVS-WSTM 253
Query: 277 IDMYGKGKCVGEALEIFEMME--EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQP 334
+ Y K + A +F+ M K++ +W I+ + + G RL D+M+++G +
Sbjct: 254 VMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKF 313
Query: 335 DLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGS 394
D ++L AC+ L G +IH + + L N ++ NAL+DMY KCG+
Sbjct: 314 DAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNA--------YVLNALLDMYAKCGN 365
Query: 395 MRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSA 454
++ A VF + KKD+ SWN M+ G G+ G GKEA+++FS M ++PD+VTF+ VL +
Sbjct: 366 LKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCS 425
Query: 455 CSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
C+H+G + +G ++ ME Y +VP +EHY C++D+LGR G+L EA ++ MP E N V
Sbjct: 426 CNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVV 485
Query: 515 VWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMR 574
+W LL A R+H D+A+ + +L+P GNY L+SNIY A +E V DIR M+
Sbjct: 486 IWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMK 545
Query: 575 QQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSL 616
V K G S +EL+DG+H F D+SHP++ IY L SL
Sbjct: 546 SMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 30 FTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFV 89
F A I+ L C L G IHS + R+ + + + +L++MY+KC +K A V
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMA 149
FN++ + ++ ++N M+ G + + ++ F+ MR+ G+ PDK TF ++ C C+
Sbjct: 373 FNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVL-CSCNHAG 430
Query: 150 VLE--------VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DV 200
+++ ++K++ LV + V LV+ + ++EA+KV + +P+ +V
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQ------VEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSK 228
V+W A++ E A EV + K
Sbjct: 485 VIWGALLGACRMHNEVDIAKEVLDNLVK 512
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/633 (30%), Positives = 326/633 (51%), Gaps = 44/633 (6%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L C +L +++H+++LRT I S +++ S + YAL VF+++
Sbjct: 14 TILEKLSFC---KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSI 70
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
P +N + + + F+ +R +G D+++F ++K V A+ E
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEG 130
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++HG+ FK+ D ++ + ++ Y C + A VF+E+ RDVV WN M+ Y +
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVM 273
G +A ++F M + + ++SA G + R ++ +++ ++
Sbjct: 191 GLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLL 250
Query: 274 NALIDMYGKGKCVGEALE-------------------------------IFEMMEEKDIF 302
AL+ MY C+ A E IF+ E+KD+
Sbjct: 251 TALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLV 310
Query: 303 SWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYI 362
W ++++ + + LR+F+ M +G +PD+V+ +V+ AC++L L + +H I
Sbjct: 311 CWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 363 VVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGM 422
VNGL S +NNAL++MY KCG + + VF KM +++V SW+ MI M
Sbjct: 371 HVNGLESELS--------INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSM 422
Query: 423 DGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIE 482
G+ +AL +F+ M + ++P+EVTFVGVL CSHSG + +G++ M Y + P +E
Sbjct: 423 HGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLE 482
Query: 483 HYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQL 542
HY C++D+ GRA L EA E+ +MP +N V+W +L++A R+HG +L + AA+R+ +L
Sbjct: 483 HYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILEL 542
Query: 543 EPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRS 602
EP H G VLMSNIY ++E+V +IR M ++NV K G S I+ H F+ D+
Sbjct: 543 EPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKR 602
Query: 603 HPEAKSIYAELHSLTARLREHGDC--CAGTLFD 633
H ++ IYA+L + ++L+ G C L D
Sbjct: 603 HKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVD 635
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 320/586 (54%), Gaps = 35/586 (5%)
Query: 52 QEIHSYMLRTGIIDSPLSITSLINMYSKCC----QMKYALFVFNNLSCEPNVFT---YNA 104
++IH +L + I + + L + +CC Q +YA L C+ + +++
Sbjct: 18 KQIHCLLLTSPIFYTRRDLF-LSRLLRRCCTAATQFRYA----RRLLCQLQTLSIQLWDS 72
Query: 105 MISGFYSNDFAFKGLDF--FNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVK-----KIH 157
+I F + L F + HMR+ GV+P ++TFP L+K AV +++ + H
Sbjct: 73 LIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLK------AVFKLRDSNPFQFH 126
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K GLD D ++ ++L++ Y + A ++F+ +DVV W AM++G+ + G
Sbjct: 127 AHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSAS 186
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG-YDSGVPVMNAL 276
+A+ F M K G+ + TV VL A + + GR VHG+ ++ G V + ++L
Sbjct: 187 EAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSL 246
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDL 336
+DMYGK C +A ++F+ M +++ +W +++ + Q D + +F+ ML + P+
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 337 VTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMR 396
T S+VL AC+H+ AL GR++H Y++ N + N + L+D+Y KCG +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA--------GTTLIDLYVKCGCLE 358
Query: 397 DAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACS 456
+A +VF ++ +K+V +W MI G+ G ++A D+F M + + P+EVTF+ VLSAC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 457 HSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVW 516
H G + +GR M+ R+ + P +HY C++D+ GR G L EA L MP E VVW
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 517 RTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQ 576
L + LH + +L + AA RV +L+P H G Y L++N+Y ++EV +R M+ Q
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 577 NVRKNPGCSWIELKDGLHTFISSDRSHP-EAKSIYAELHSLTARLR 621
V K+PG SWIE+K L FI+ D P E+ +Y L ++ ++R
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 7/177 (3%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + L CAH L +G+ +H YM++ I + + T+LI++Y KC ++ A+ VF L
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL 367
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
E NV+T+ AMI+GF ++ +A D F M V P++ TF ++ C V E
Sbjct: 368 H-EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 154 KKIHGLV---FKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDV-VLWNAM 206
+++ + F + D Y + +V+ + + +EEA + E +P+ V+W A+
Sbjct: 427 RRLFLSMKGRFNMEPKADHY--ACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 346 bits (887), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 290/511 (56%), Gaps = 14/511 (2%)
Query: 110 YSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
Y D + + + ++ G+ D T+ LIKCC AV E I ++ G +
Sbjct: 38 YQRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM 96
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKE 229
++ + L+N Y+K + +A ++F+++P R+V+ W M++ Y++ KALE+ M ++
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 230 GIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEA 289
+ + +T + VL + M + R++H ++K G +S V V +ALID++ K +A
Sbjct: 157 NVRPNVYTYSSVLRSCNGMS---DVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 290 LEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHL 349
L +F+ M D WNSI+ Q D L LF RM AGF + T ++VL AC+ L
Sbjct: 214 LSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 350 AALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD 409
A L G Q H +IV K D+ +NNAL+DMY KCGS+ DA VF +M ++D
Sbjct: 274 ALLELGMQAHVHIV----------KYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 410 VASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLP 469
V +W+ MI G +G +EAL +F M + KP+ +T VGVL ACSH+G L G +
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 470 LMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNT 529
M+ YG+ P EHY C+ID+LG+AG+L++A +L M E + V WRTLL A R+ N
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 530 DLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIEL 589
LAE AA++V L+P G Y L+SNIY K++ V +IR MR + ++K PGCSWIE+
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 590 KDGLHTFISSDRSHPEAKSIYAELHSLTARL 620
+H FI D SHP+ + +L+ L RL
Sbjct: 504 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRL 534
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 198/390 (50%), Gaps = 22/390 (5%)
Query: 33 ATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNN 92
AT ++ C + +G I ++ G + LINMY K + A +F+
Sbjct: 62 ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQ 121
Query: 93 LSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLE 152
+ + NV ++ MIS + K L+ M + V P+ YT+ +++ C + +
Sbjct: 122 MP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSD 177
Query: 153 VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQ 212
V+ +H + K GL+ DV++ SAL++ + K E+AL VF+E+ D ++WN+++ G+AQ
Sbjct: 178 VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQ 237
Query: 213 IGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPV 272
ALE+F+RM + G + T+T VL A + + G H +VK YD + +
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLIL 295
Query: 273 MNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGF 332
NAL+DMY K + +AL +F M+E+D+ +W+++++ Q G L+LF+RM S+G
Sbjct: 296 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 355
Query: 333 QPDLVTFSTVLPACSHLAALMHG----RQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDM 388
+P+ +T VL ACSH L G R + ++ + ++ C ++D+
Sbjct: 356 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC-----------MIDL 404
Query: 389 YTKCGSMRDAQMVFTKMS-KKDVASWNIMI 417
K G + DA + +M + D +W ++
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 345 bits (884), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 322/576 (55%), Gaps = 14/576 (2%)
Query: 51 GQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFY 110
G+++H +++ G + +SL++MY+KC +++ A F +S EPN ++NA+I+GF
Sbjct: 120 GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFV 178
Query: 111 SNDFAFKGLDFFNHMR-QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDV 169
M + V D TF L+ D M +K++H V KLGL ++
Sbjct: 179 QVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEI 238
Query: 170 YIGSALVNTYLKCQFMEEALKVFEELP-LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSK 228
I +A++++Y C + +A +VF+ L +D++ WN+M+ G+++ A E+F +M +
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 229 EGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGK--GKCV 286
+ +T TG+LSA G+ +HG+V+K G + NALI MY + +
Sbjct: 299 HWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 287 GEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPAC 346
+AL +FE ++ KD+ SWNSI+T Q G + ++ F + S+ + D FS +L +C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 347 SHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS 406
S LA L G+QIH +G N F+ ++L+ MY+KCG + A+ F ++S
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNE--------FVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 407 KK-DVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQGR 465
K +WN MILGY G G+ +LD+FS MC +K D VTF +L+ACSH+G + +G
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 466 EFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAASRL 525
E L LME Y + P +EHY +D+LGRAG +N+A EL +MP +P+V +T L R
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 526 HGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCS 585
G ++A A + ++EP YV +S++Y K+EE ++ M+++ V+K PG S
Sbjct: 591 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Query: 586 WIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLR 621
WIE+++ + F + DRS+P + IY + LT ++
Sbjct: 651 WIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 234/484 (48%), Gaps = 14/484 (2%)
Query: 48 LQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMIS 107
QK H Y ++ G I +++ Y K + YA +F+ + +V ++N MIS
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSV-SWNTMIS 74
Query: 108 GFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDL 167
G+ S F M++ G D Y+F L+K V +++HGLV K G +
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 168 DVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMS 227
+VY+GS+LV+ Y KC+ +E+A + F+E+ + V WNA++ G+ Q+ + A + M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 228 -KEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCV 286
K + M T +L+ L F + VH V+K+G + + NA+I Y V
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 287 GEALEIFE-MMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPA 345
+A +F+ + KD+ SWNS++ + + LF +M + D+ T++ +L A
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 346 CSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTK--CGSMRDAQMVFT 403
CS + G+ +HG ++ GL + S NAL+ MY + G+M DA +F
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSA--------TNALISMYIQFPTGTMEDALSLFE 366
Query: 404 KMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGFLSQ 463
+ KD+ SWN +I G+ G ++A+ FS + +++K D+ F +L +CS L
Sbjct: 367 SLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 464 GREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVVWRTLLAAS 523
G++ L ++ G V + +I M + G + A + + ++ + V W ++
Sbjct: 427 GQQIHAL-ATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 524 RLHG 527
HG
Sbjct: 486 AQHG 489
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 15 FNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLI 74
F++ SS + ++ F+ A L+ C+ LQ GQ+IH+ ++G + + I+SLI
Sbjct: 396 FSYLRSSEIKVDDYAFS-----ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 75 NMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDK 134
MYSKC ++ A F +S + + +NAMI G+ + LD F+ M V D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 135 YTFPCLIKCCCDVMAV---LEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKV 191
TF ++ C + LE+ + V+K+ ++ Y +A V+ + + +A ++
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHY--AAAVDLLGRAGLVNKAKEL 568
Query: 192 FEELPL 197
E +PL
Sbjct: 569 IESMPL 574
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 290/492 (58%), Gaps = 10/492 (2%)
Query: 135 YTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEE 194
+ + L+ C D A+ + +++H + K Y+ + L+ Y KC +E+A KV +E
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 195 LPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG 254
+P ++VV W AM++ Y+Q G +AL VF M + + FT VL++ I G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 255 RVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQC 314
+ +HG++VK YDS + V ++L+DMY K + EA EIFE + E+D+ S +I+ + Q
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 315 GNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCK 374
G + L +F R+ S G P+ VT++++L A S LA L HG+Q H +++ L
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA--- 289
Query: 375 DIDDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFS 434
+ N+L+DMY+KCG++ A+ +F M ++ SWN M++GY G G+E L++F
Sbjct: 290 -----VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 435 CMC-EAKLKPDEVTFVGVLSACSHSGFLSQGRE-FLPLMESRYGVVPTIEHYTCVIDMLG 492
M E ++KPD VT + VLS CSH G F ++ YG P EHY C++DMLG
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 493 RAGQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVL 552
RAG+++EA+E MP++ V +LL A R+H + D+ E +R+ ++EP + GNYV+
Sbjct: 405 RAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVI 464
Query: 553 MSNIYVAGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAE 612
+SN+Y + G++ +V ++R M Q+ V K PG SWI+ + LH F ++DR+HP + + A+
Sbjct: 465 LSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAK 524
Query: 613 LHSLTARLREHG 624
+ ++ ++++ G
Sbjct: 525 MKEISIKMKQAG 536
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 2/313 (0%)
Query: 37 ASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNLSCE 96
A L C + L+ GQ +H++M++T + + T L+ Y KC ++ A V + + E
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP-E 115
Query: 97 PNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKI 156
NV ++ AMIS + + + L F M + P+++TF ++ C + K+I
Sbjct: 116 KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI 175
Query: 157 HGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEF 216
HGL+ K D +++GS+L++ Y K ++EA ++FE LP RDVV A++ GYAQ+G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 217 HKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNAL 276
+ALE+F R+ EG+ + T +L+AL + +G+ H V++ + N+L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSL 295
Query: 277 IDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG-FQPD 335
IDMY K + A +F+ M E+ SWN+++ + + G L LF M +PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 336 LVTFSTVLPACSH 348
VT VL CSH
Sbjct: 356 AVTLLAVLSGCSH 368
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 152/315 (48%), Gaps = 26/315 (8%)
Query: 221 EVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMY 280
E M+ G M +L+A + ++G+ VH ++K Y + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 281 GKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFS 340
GK C+ +A ++ + M EK++ SW ++++ + Q G+ L +F M+ + +P+ TF+
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 341 TVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQM 400
TVL +C + L G+QIHG IV + +F+ ++L+DMY K G +++A+
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSH--------IFVGSSLLDMYAKAGQIKEARE 209
Query: 401 VFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSACSHSGF 460
+F + ++DV S +I GY G +EAL+MF + + P+ VT+ +L+A S
Sbjct: 210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLAL 269
Query: 461 LSQG--------REFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEAN 512
L G R LP Y V+ +IDM + G L+ A L MP E
Sbjct: 270 LDHGKQAHCHVLRRELPF----YAVLQ-----NSLIDMYSKCGNLSYARRLFDNMP-ERT 319
Query: 513 PVVWRTLLAASRLHG 527
+ W +L HG
Sbjct: 320 AISWNAMLVGYSKHG 334
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 343 bits (880), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 190/589 (32%), Positives = 309/589 (52%), Gaps = 42/589 (7%)
Query: 68 LSITSLINMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHM-R 126
S +L+ YSK + F L V T+N +I G+ + + +N M R
Sbjct: 73 FSWNNLLLAYSKAGLISEMESTFEKLPDRDGV-TWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 127 QLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTY------- 179
+ T ++K V K+IHG V KLG + + +GS L+ Y
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 180 ------------------------LKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGE 215
L C +E+AL++F + +D V W AM+ G AQ G
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGL 250
Query: 216 FHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNA 275
+A+E FR M +G+ M ++ VL A +G G+ +H +++ + + V +A
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 276 LIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
LIDMY K KC+ A +F+ M++K++ SW +++ + Q G + +++F M +G PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
T + AC+++++L G Q HG + +GL I V ++N+L+ +Y KCG +
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGL--------IHYVTVSNSLVTLYGKCGDI 422
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
D+ +F +M+ +D SW M+ Y G+ E + +F M + LKPD VT GV+SAC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 456 SHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPVV 515
S +G + +G+ + LM S YG+VP+I HY+C+ID+ R+G+L EA MP + +
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542
Query: 516 WRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEVLDIRHTMRQ 575
W TLL+A R GN ++ + AA+ + +L+P H Y L+S+IY + GK++ V +R MR+
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602
Query: 576 QNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLREHG 624
+NV+K PG SWI+ K LH+F + D S P IYA+L L ++ ++G
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNG 651
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 199/426 (46%), Gaps = 41/426 (9%)
Query: 24 QTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSK---- 79
+ F+ T T + L+L + ++ G++IH +++ G L + L+ MY+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 80 ---------------------------CCQMKYALFVFNNLSCEPNVFTYNAMISGFYSN 112
C ++ AL +F + E + ++ AMI G N
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM--EKDSVSWAAMIKGLAQN 248
Query: 113 DFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIG 172
A + ++ F M+ G+ D+Y F ++ C + A+ E K+IH + + +Y+G
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 173 SALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIW 232
SAL++ Y KC+ + A VF+ + ++VV W AMV GY Q G +A+++F M + GI
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 233 MSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEI 292
+T+ +SA + + G HG + G V V N+L+ +YGK + ++ +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 293 FEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAAL 352
F M +D SW ++++ + Q G T++LFD+M+ G +PD VT + V+ ACS +
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 353 MHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSMRDAQMVFTKMS-KKDVA 411
G++ + ++ G I + ++D++++ G + +A M D
Sbjct: 489 EKGQRYFKLMT----SEYGIVPSIGHY---SCMIDLFSRSGRLEEAMRFINGMPFPPDAI 541
Query: 412 SWNIMI 417
W ++
Sbjct: 542 GWTTLL 547
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 154/311 (49%), Gaps = 20/311 (6%)
Query: 14 CFNFSTSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSL 73
CF G + +PF + L C + +G++IH+ ++RT D ++L
Sbjct: 257 CFREMKVQGLKMDQYPFG-----SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 74 INMYSKCCQMKYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPD 133
I+MY KC + YA VF+ + + NV ++ AM+ G+ A + + F M++ G+ PD
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 134 KYTFPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFE 193
YT I C +V ++ E + HG GL V + ++LV Y KC ++++ ++F
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 194 ELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKN 253
E+ +RD V W AMV+ YAQ G + +++F +M + G+ T+TGV+SA G +
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490
Query: 254 GRVV-------HGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME-EKDIFSWN 305
G+ +GIV +G+ S +ID++ + + EA+ M D W
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYS------CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 306 SIMTVHEQCGN 316
++++ GN
Sbjct: 545 TLLSACRNKGN 555
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 378 DVFMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMC 437
++F N L+ Y+K G + + + F K+ +D +WN++I GY + G A+ ++ M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 438 -EAKLKPDEVTFVGVLSACSHSGFLSQGREF 467
+ VT + +L S +G +S G++
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/651 (32%), Positives = 336/651 (51%), Gaps = 56/651 (8%)
Query: 9 NPFSSCFNFSTSSGNQTFNHPFTLATC------IASLQLCAHQTNLQKGQEIHSYMLRTG 62
NP S FN S T + I+ L +C + ++HS + G
Sbjct: 5 NPLKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFK---QLHSQSITRG 61
Query: 63 IIDSPLSITSLINMYSKCCQM----KYALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKG 118
+ +P L + C ++ YA +F + EP+V +N MI G+ D +G
Sbjct: 62 VAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIP-EPDVVVWNNMIKGWSKVDCDGEG 118
Query: 119 LDFFNHMRQLGVLPDKYTFPCLIKCCC-DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVN 177
+ + +M + GV PD +TFP L+ D A+ KK+H V K GL ++Y+ +ALV
Sbjct: 119 VRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVK 178
Query: 178 TYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFT 237
Y C M+ A VF+ DV WN M++GY ++ E+ +++E+ M + + + T
Sbjct: 179 MYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 238 VTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMME 297
+ VLSA + + VH V + + + + NAL++ Y + A+ IF M+
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 298 EKDIFSWNSIMTVHEQCGNH----------------------DGTLR---------LFDR 326
+D+ SW SI+ + + GN DG LR +F
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 327 MLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALM 386
M SAG PD T +VL AC+HL +L G I YI N + +DV + NAL+
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK--------NDVVVGNALI 410
Query: 387 DMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEV 446
DMY KCG AQ VF M ++D +W M++G +GQG+EA+ +F M + ++PD++
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 447 TFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELALA 506
T++GVLSAC+HSG + Q R+F M S + + P++ HY C++DMLGRAG + EAYE+
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 507 MPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEEV 566
MP N +VW LL ASRLH + +AE+AA+++ +LEP + Y L+ NIY +++++
Sbjct: 531 MPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDL 590
Query: 567 LDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
++R + ++K PG S IE+ H F++ D+SH +++ IY +L L
Sbjct: 591 REVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 343 bits (879), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/537 (34%), Positives = 292/537 (54%), Gaps = 10/537 (1%)
Query: 88 FVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDV 147
FV N+ +N + + + + M + G PD ++FP ++K C +
Sbjct: 7 FVRNSAVAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASL 66
Query: 148 MAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRD--VVLWNA 205
+ +++H V K G + + ++ +AL++ Y KC + +A KVFEE P V +NA
Sbjct: 67 SLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNA 126
Query: 206 MVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMG 265
+++GY + A +FRRM + G+ + T+ G++ + + GR +HG VK G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 266 YDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFD 325
DS V V+N+ I MY K V +F+ M K + +WN++++ + Q G L L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 326 RMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNAL 385
+M S+G PD T +VL +C+HL A G ++ + NG N VF++NA
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN--------VFVSNAS 298
Query: 386 MDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDE 445
+ MY +CG++ A+ VF M K + SW MI YGM G G+ L +F M + ++PD
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 446 VTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYELAL 505
FV VLSACSHSG +G E M+ Y + P EHY+C++D+LGRAG+L+EA E
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 506 AMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKYEE 565
+MP E + VW LL A ++H N D+AE+A +V + EP + G YVLMSNIY E
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 566 VLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTARLRE 622
+ IR MR++ RK PG S++E K +H F++ DRSH + + ++ L L + E
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME 535
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 174/332 (52%), Gaps = 10/332 (3%)
Query: 19 TSSGNQTFNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYS 78
+ S F+ PF L +C ASL L GQ++H ++ + G P +T+LI+MY
Sbjct: 47 SGSSPDAFSFPFILKSC-ASLSLPV------SGQQLHCHVTKGGCETEPFVLTALISMYC 99
Query: 79 KCCQMKYALFVF--NNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYT 136
KC + A VF N S + +V YNA+ISG+ +N F M++ GV D T
Sbjct: 100 KCGLVADARKVFEENPQSSQLSV-CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVT 158
Query: 137 FPCLIKCCCDVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELP 196
L+ C + + +HG K GLD +V + ++ + Y+KC +E ++F+E+P
Sbjct: 159 MLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMP 218
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
++ ++ WNA+++GY+Q G + LE++ +M G+ FT+ VLS+ +G K G
Sbjct: 219 VKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHE 278
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
V +V G+ V V NA I MY + + +A +F++M K + SW +++ + G
Sbjct: 279 VGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSH 348
+ L LFD M+ G +PD F VL ACSH
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSH 370
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 5/312 (1%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T + + LC L G+ +H ++ G+ + S I MY KC ++ +F+ +
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEV 153
+ + T+NA+ISG+ N A+ L+ + M+ GV PD +T ++ C + A
Sbjct: 218 PVK-GLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG 276
Query: 154 KKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQI 213
++ LV G +V++ +A ++ Y +C + +A VF+ +P++ +V W AM+ Y
Sbjct: 277 HEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMH 336
Query: 214 GEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNG-RVVHGIVVKMGYDSGVPV 272
G L +F M K GI VLSA G G + + + + G
Sbjct: 337 GMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH 396
Query: 273 MNALIDMYGKGKCVGEALEIFEMME-EKDIFSWNSIMTVHEQCGNHDGTLRLFDRMLSAG 331
+ L+D+ G+ + EA+E E M E D W +++ + N D F +++
Sbjct: 397 YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE-- 454
Query: 332 FQPDLVTFSTVL 343
F+P+ + + ++
Sbjct: 455 FEPNNIGYYVLM 466
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 190/594 (31%), Positives = 315/594 (53%), Gaps = 17/594 (2%)
Query: 26 FNHPFTLATCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKY 85
F PF + CA ++ + +H++++++ T+ ++M+ KC + Y
Sbjct: 53 FTFPFVA-------KACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDY 105
Query: 86 ALFVFNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCC 145
A VF + E + T+NAM+SGF + K F MR + PD T LI+
Sbjct: 106 AAKVFERMP-ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Query: 146 DVMAVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPL--RDVVLW 203
++ ++ +H + +LG+D+ V + + ++TY KC ++ A VFE + R VV W
Sbjct: 165 FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 204 NAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVK 263
N+M Y+ GE A ++ M +E T + ++ GR++H +
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 264 MGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRL 323
+G D + +N I MY K + A +F++M + SW +++ + + G+ D L L
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 324 FDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNN 383
F M+ +G +PDLVT +++ C +L G+ I + G CK D+V + N
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG------CKR-DNVMICN 397
Query: 384 ALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKP 443
AL+DMY+KCGS+ +A+ +F +K V +W MI GY ++G EAL +FS M + KP
Sbjct: 398 ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKP 457
Query: 444 DEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLNEAYEL 503
+ +TF+ VL AC+HSG L +G E+ +M+ Y + P ++HY+C++D+LGR G+L EA EL
Sbjct: 458 NHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL 517
Query: 504 ALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYVAGGKY 563
M + + +W LL A ++H N +AE AA+ +F LEP YV M+NIY A G +
Sbjct: 518 IRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMW 577
Query: 564 EEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLT 617
+ IR M+Q+N++K PG S I++ H+F + H E + IY L+ L+
Sbjct: 578 DGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLS 631
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 209/433 (48%), Gaps = 13/433 (3%)
Query: 98 NVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVLPDKYTFPCLIKCCCDVMAVLEVKKIH 157
+V +N I + + + L F M++ G P+ +TFP + K C + V + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 158 GLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVNGYAQIGEFH 217
+ K DV++G+A V+ ++KC ++ A KVFE +P RD WNAM++G+ Q G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 218 KALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDSGVPVMNALI 277
KA +FR M I TV ++ + K +H + +++G D V V N I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 278 DMYGKGKCVGEALEIFEMMEEKD--IFSWNSIMTVHEQCGNHDGTLRLFDRMLSAGFQPD 335
YGK + A +FE ++ D + SWNS+ + G L+ ML F+PD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 336 LVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDVFMNNALMDMYTKCGSM 395
L TF + +C + L GR IH + + G+ +DI+ + N + MY+K
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAI-----HLGTDQDIEAI---NTFISMYSKSEDT 307
Query: 396 RDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEAKLKPDEVTFVGVLSAC 455
A+++F M+ + SW +MI GY G EAL +F M ++ KPD VT + ++S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 456 SHSGFLSQGREFLPLMESRYGVV-PTIEHYTCVIDMLGRAGQLNEAYELALAMPNEANPV 514
G L G+ ++ YG + +IDM + G ++EA ++ P E V
Sbjct: 368 GKFGSLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVV 425
Query: 515 VWRTLLAASRLHG 527
W T++A L+G
Sbjct: 426 TWTTMIAGYALNG 438
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 147/338 (43%), Gaps = 12/338 (3%)
Query: 197 LRDVVLWNAMVNGYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRV 256
L V WN + + ++L +FR M + G + FT V A + +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 257 VHGIVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGN 316
VH ++K + S V V A +DM+ K V A ++FE M E+D +WN++++ Q G+
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 317 HDGTLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDI 376
D LF M PD VT T++ + S +L +H + G+ D+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGV-------DV 186
Query: 377 DDVFMNNALMDMYTKCGSMRDAQMVFTKMSKKD--VASWNIMILGYGMDGQGKEALDMFS 434
V + N + Y KCG + A++VF + + D V SWN M Y + G+ +A ++
Sbjct: 187 -QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYC 245
Query: 435 CMCEAKLKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRA 494
M + KPD TF+ + ++C + L+QGR + G IE I M ++
Sbjct: 246 LMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 495 GQLNEAYELALAMPNEANPVVWRTLLAASRLHGNTDLA 532
A L + V W +++ G+ D A
Sbjct: 305 EDTCSA-RLLFDIMTSRTCVSWTVMISGYAEKGDMDEA 341
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 340 bits (873), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 288/486 (59%), Gaps = 17/486 (3%)
Query: 147 VMAVLEVKKIHGLVFKLGLDL-DVYIGSALVNTYLKCQF---MEEALKVFE--ELPLRDV 200
V ++ ++++IH + G+ + D +G L+ + M A KVF E P+ +V
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPI-NV 85
Query: 201 VLWNAMVNGYAQIGEFHKALEVFRRMSKEG-IWMSRFTVTGVLSALIMMGFFKNGRVVHG 259
+WN ++ GYA+IG A ++R M G + T ++ A+ M + G +H
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 260 IVVKMGYDSGVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDG 319
+V++ G+ S + V N+L+ +Y V A ++F+ M EKD+ +WNS++ + G +
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 320 TLRLFDRMLSAGFQPDLVTFSTVLPACSHLAALMHGRQIHGYIVVNGLAKNGSCKDIDDV 379
L L+ M S G +PD T ++L AC+ + AL G+++H Y++ GL +N +
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN--------L 257
Query: 380 FMNNALMDMYTKCGSMRDAQMVFTKMSKKDVASWNIMILGYGMDGQGKEALDMFSCMCEA 439
+N L+D+Y +CG + +A+ +F +M K+ SW +I+G ++G GKEA+++F M
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 317
Query: 440 K-LKPDEVTFVGVLSACSHSGFLSQGREFLPLMESRYGVVPTIEHYTCVIDMLGRAGQLN 498
+ L P E+TFVG+L ACSH G + +G E+ M Y + P IEH+ C++D+L RAGQ+
Sbjct: 318 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Query: 499 EAYELALAMPNEANPVVWRTLLAASRLHGNTDLAEIAAQRVFQLEPGHCGNYVLMSNIYV 558
+AYE +MP + N V+WRTLL A +HG++DLAE A ++ QLEP H G+YVL+SN+Y
Sbjct: 378 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 437
Query: 559 AGGKYEEVLDIRHTMRQQNVRKNPGCSWIELKDGLHTFISSDRSHPEAKSIYAELHSLTA 618
+ ++ +V IR M + V+K PG S +E+ + +H F+ D+SHP++ +IYA+L +T
Sbjct: 438 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 497
Query: 619 RLREHG 624
RLR G
Sbjct: 498 RLRSEG 503
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 173/328 (52%), Gaps = 9/328 (2%)
Query: 35 CIASLQLCAHQTNLQKGQEIHSYMLRTG--IIDSPLS---ITSLINMYSKCCQMKYALFV 89
CI LQ +++ K ++IH++ +R G I D+ L I L+++ S M YA V
Sbjct: 18 CINLLQTYG-VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP-PMSYAHKV 75
Query: 90 FNNLSCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQLGVL-PDKYTFPCLIKCCCDVM 148
F+ + NVF +N +I G+ + + MR G++ PD +T+P LIK +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 149 AVLEVKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLRDVVLWNAMVN 208
V + IH +V + G +Y+ ++L++ Y C + A KVF+++P +D+V WN+++N
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 209 GYAQIGEFHKALEVFRRMSKEGIWMSRFTVTGVLSALIMMGFFKNGRVVHGIVVKMGYDS 268
G+A+ G+ +AL ++ M+ +GI FT+ +LSA +G G+ VH ++K+G
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 269 GVPVMNALIDMYGKGKCVGEALEIFEMMEEKDIFSWNSIMTVHEQCGNHDGTLRLFDRML 328
+ N L+D+Y + V EA +F+ M +K+ SW S++ G + LF M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 329 SA-GFQPDLVTFSTVLPACSHLAALMHG 355
S G P +TF +L ACSH + G
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEG 343
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Query: 34 TCIASLQLCAHQTNLQKGQEIHSYMLRTGIIDSPLSITSLINMYSKCCQMKYALFVFNNL 93
T ++ L CA L G+ +H YM++ G+ + S L+++Y++C +++ A +F+ +
Sbjct: 224 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Query: 94 SCEPNVFTYNAMISGFYSNDFAFKGLDFFNHMRQL-GVLPDKYTFPCLIKCCCDVMAVLE 152
+ N ++ ++I G N F + ++ F +M G+LP + TF ++ C V E
Sbjct: 284 -VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKE 342
Query: 153 -VKKIHGLVFKLGLDLDVYIGSALVNTYLKCQFMEEALKVFEELPLR-DVVLWNAM---- 206
+ + + ++ + +V+ + +++A + + +P++ +VV+W +
Sbjct: 343 GFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGAC 402
Query: 207 -VNGYAQIGEFHK 218
V+G + + EF +
Sbjct: 403 TVHGDSDLAEFAR 415
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,033,674
Number of Sequences: 539616
Number of extensions: 10258291
Number of successful extensions: 37269
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 27606
Number of HSP's gapped (non-prelim): 2380
length of query: 660
length of database: 191,569,459
effective HSP length: 124
effective length of query: 536
effective length of database: 124,657,075
effective search space: 66816192200
effective search space used: 66816192200
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)