BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048292
MELVASKNNETEHQEHANTCFHRTAENEVTTNLRSGKGQSFSHGRHHARTAHGILNIIGW
GILLPIGVIIARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKT
HRILGILVFAFATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQS
HAEKWKWLYVAILALLAFLAAALEIFRWIVKSKLQLPIAFHNNNIYNFT

High Scoring Gene Products

Symbol, full name Information P value
AT4G17280 protein from Arabidopsis thaliana 2.0e-24
AT5G47530 protein from Arabidopsis thaliana 1.4e-23
AT5G35735 protein from Arabidopsis thaliana 6.2e-23
AT4G12980 protein from Arabidopsis thaliana 8.4e-23
AT3G25290 protein from Arabidopsis thaliana 1.7e-21
AT2G04850 protein from Arabidopsis thaliana 1.9e-17
AT3G59070 protein from Arabidopsis thaliana 1.3e-16
AT3G07570 protein from Arabidopsis thaliana 2.9e-11
AT3G61750 protein from Arabidopsis thaliana 4.3e-10
AT2G30890 protein from Arabidopsis thaliana 7.5e-05
AT4G18260 protein from Arabidopsis thaliana 0.00087

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048292
        (229 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2130789 - symbol:AT4G17280 species:3702 "Arabi...   279  2.0e-24   1
TAIR|locus:2168948 - symbol:AT5G47530 species:3702 "Arabi...   271  1.4e-23   1
TAIR|locus:505006660 - symbol:AT5G35735 "AT5G35735" speci...   266  6.2e-23   1
TAIR|locus:2123271 - symbol:AT4G12980 "AT4G12980" species...   264  8.4e-23   1
TAIR|locus:2090240 - symbol:AT3G25290 "AT3G25290" species...   253  1.7e-21   1
TAIR|locus:2049254 - symbol:AT2G04850 species:3702 "Arabi...   218  1.9e-17   1
TAIR|locus:2077690 - symbol:AT3G59070 species:3702 "Arabi...   212  1.3e-16   1
TAIR|locus:2091097 - symbol:AT3G07570 species:3702 "Arabi...   161  2.9e-11   1
TAIR|locus:2076770 - symbol:AT3G61750 species:3702 "Arabi...   151  4.3e-10   1
TAIR|locus:2052846 - symbol:AT2G30890 "AT2G30890" species...   114  7.5e-05   1
TAIR|locus:2141882 - symbol:AT4G18260 species:3702 "Arabi...   110  0.00087   1


>TAIR|locus:2130789 [details] [associations]
            symbol:AT4G17280 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002687 GenomeReviews:CT486007_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 InterPro:IPR005018 SMART:SM00664
            PROSITE:PS50836 UniGene:At.48869 UniGene:At.63700 EMBL:AY072011
            EMBL:BT002717 IPI:IPI00526777 RefSeq:NP_193461.5
            ProteinModelPortal:Q8VYH6 PRIDE:Q8VYH6 EnsemblPlants:AT4G17280.1
            GeneID:827442 KEGG:ath:AT4G17280 TAIR:At4g17280
            HOGENOM:HOG000239819 OMA:GRCAGES PhylomeDB:Q8VYH6
            ProtClustDB:CLSN2686387 Genevestigator:Q8VYH6 InterPro:IPR017214
            Pfam:PF04526 PIRSF:PIRSF037471 Uniprot:Q8VYH6
        Length = 402

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 66/211 (31%), Positives = 95/211 (45%)

Query:    22 HRTAENEV----TTNLRSG----KGQSFSHGRHHARTAHXXXXXXXXXXXXXXXXXXARY 73
             H T+ N V    T NL SG     G +    +   R  H                  ARY
Sbjct:   181 HPTSGNNVRSVSTLNLVSGVSAAAGGAGGSSKLRKRNIHGILNGVSWGIMMPLGAIIARY 240

Query:    74 LRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFAFAT 133
             LR        W  +H+ CQ S YI+G  GW  GL LG  S      THR +GI +F+ AT
Sbjct:   241 LRVAKSADPAWFYIHVFCQASAYIIGVAGWATGLKLGGDSPGIQYSTHRAIGIALFSLAT 300

Query:   134 IQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEKWKWXXXXXX 193
             +Q+   FL+P+ E++   +W I+H ++GYT++ L + N+F+G+   S  ++WK       
Sbjct:   301 VQVFAMFLRPKPEHKHRLYWNIYHHTIGYTIIILGVVNVFKGLGILSPKKQWKNAYIGII 360

Query:   194 XXXXXXXXXXEIFRWIV---KSKLQLPIAFH 221
                       E F W V   + KL+   A H
Sbjct:   361 VVLAIVATLLEAFTWYVVIKRRKLEAKTAQH 391


>TAIR|locus:2168948 [details] [associations]
            symbol:AT5G47530 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:AB025628 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 eggNOG:NOG281275 UniGene:At.66684
            UniGene:At.7964 HOGENOM:HOG000239819 ProtClustDB:CLSN2686387
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:BT012551
            EMBL:AK176454 IPI:IPI00532608 RefSeq:NP_199564.1 PaxDb:Q9FGK4
            PRIDE:Q9FGK4 EnsemblPlants:AT5G47530.1 GeneID:834803
            KEGG:ath:AT5G47530 TAIR:At5g47530 InParanoid:Q9FGK4 OMA:PLANGGI
            PhylomeDB:Q9FGK4 ArrayExpress:Q9FGK4 Genevestigator:Q9FGK4
            Uniprot:Q9FGK4
        Length = 395

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 66/201 (32%), Positives = 91/201 (45%)

Query:    22 HRTAENEV----TTNLRSGKGQSFSHGRHHA-----RTAHXXXXXXXXXXXXXXXXXXAR 72
             H T+ N V    T NL SG   S S G   A     R  H                  AR
Sbjct:   172 HPTSGNNVRSVSTLNLVSGASGSTSTGAGGASKLRKRNIHGILNGVSWGIMMPIGAIIAR 231

Query:    73 YLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFAFA 132
             YL+        W  LH+ CQ S YI+G  GW  GL LGN S       HR +GI +F  A
Sbjct:   232 YLKVSKSADPAWFYLHVFCQSSAYIIGVAGWATGLKLGNESAGIQFTFHRAVGIALFCLA 291

Query:   133 TIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEKWKWXXXXX 192
             TIQ+   FL+P+ E++   +W I+H ++GY+V+ L++ N+F+G+   S  ++W+      
Sbjct:   292 TIQVFAMFLRPKPEHKYRVYWNIYHHTVGYSVIILAVVNVFKGLDILSPEKQWRNAYTAI 351

Query:   193 XXXXXXXXXXXEIFRWIVKSK 213
                        E F W V  K
Sbjct:   352 IVVLGIVAVVLEGFTWYVVIK 372


>TAIR|locus:505006660 [details] [associations]
            symbol:AT5G35735 "AT5G35735" species:3702 "Arabidopsis
            thaliana" [GO:0016020 "membrane" evidence=ISS] [GO:0005886 "plasma
            membrane" evidence=IDA] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009625 "response to insect" evidence=RCA]
            [GO:0009862 "systemic acquired resistance, salicylic acid mediated
            signaling pathway" evidence=RCA] [GO:0009963 "positive regulation
            of flavonoid biosynthetic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            [GO:0031348 "negative regulation of defense response" evidence=RCA]
            InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021 GO:GO:0005886
            EMBL:CP002688 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AB011485 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:AF372955
            EMBL:BT002220 IPI:IPI00522562 RefSeq:NP_568531.1 UniGene:At.7499
            ProteinModelPortal:Q9FKH6 STRING:Q9FKH6 PRIDE:Q9FKH6
            EnsemblPlants:AT5G35735.1 GeneID:833550 KEGG:ath:AT5G35735
            TAIR:At5g35735 InParanoid:Q9FKH6 OMA:YIGILIF PhylomeDB:Q9FKH6
            ProtClustDB:CLSN2917720 Genevestigator:Q9FKH6 Uniprot:Q9FKH6
        Length = 404

 Score = 266 (98.7 bits), Expect = 6.2e-23, P = 6.2e-23
 Identities = 46/117 (39%), Positives = 72/117 (61%)

Query:    71 ARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFA 130
             ARY++ F      W  LH+  Q+SGY++G  GW  G+ LGN S   +  THR LGI +F 
Sbjct:   230 ARYMKVFADP--TWFYLHIAFQVSGYVIGVAGWATGIKLGNDSPGTSYSTHRNLGIALFT 287

Query:   131 FATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEKWKW 187
             FAT+Q+    ++P+ +++   +W ++H ++GYT + LSI NIF+G       +KW+W
Sbjct:   288 FATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTIILSIVNIFKGFDILDPEDKWRW 344


>TAIR|locus:2123271 [details] [associations]
            symbol:AT4G12980 "AT4G12980" species:3702 "Arabidopsis
            thaliana" [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002687 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AL161535 EMBL:AL079349 InterPro:IPR005018 SMART:SM00664
            PROSITE:PS50836 InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471
            ProtClustDB:CLSN2685792 EMBL:BT003827 EMBL:BT005128 IPI:IPI00528765
            PIR:T10200 RefSeq:NP_193034.1 UniGene:At.3514 STRING:Q9SV71
            PRIDE:Q9SV71 EnsemblPlants:AT4G12980.1 GeneID:826910
            KEGG:ath:AT4G12980 TAIR:At4g12980 InParanoid:Q9SV71 OMA:NTHRNIG
            PhylomeDB:Q9SV71 Genevestigator:Q9SV71 Uniprot:Q9SV71
        Length = 394

 Score = 264 (98.0 bits), Expect = 8.4e-23, P = 8.4e-23
 Identities = 54/179 (30%), Positives = 84/179 (46%)

Query:    35 SGKGQSFSHGRHHARTAHXXXXXXXXXXXXXXXXXXARYLRRFPIEYDEWHPLHMLCQIS 94
             SG G +  + R H R  H                  ARY+R F      W  LH+ CQ S
Sbjct:   205 SGGGGA-GNSRIHKRNIHGILNAVSWGLLFPIGAMIARYMRIFESADPAWFYLHVSCQFS 263

Query:    95 GYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFAFATIQILTSFLQPRRENECSKWWE 154
              Y++G  GW  GL LG+ SK     THR +GI +F+ AT+Q+    L+PR++++    W 
Sbjct:   264 AYVIGVAGWATGLKLGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRKDHKFRFVWN 323

Query:   155 IFHQSMGYTVVALSIANIFQGIIHQSHAEKWKWXXXXXXXXXXXXXXXXEIFRWIVKSK 213
             I+H  +GY+++ L I N+F+G+   +    +K                 E+  W++  K
Sbjct:   324 IYHHGVGYSILILGIINVFKGLSILNPKHTYKTAYIAVIGTLGGITLLLEVVTWVIVLK 382


>TAIR|locus:2090240 [details] [associations]
            symbol:AT3G25290 "AT3G25290" species:3702 "Arabidopsis
            thaliana" [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR004877
            Pfam:PF03188 GO:GO:0016021 GO:GO:0005886 GO:GO:0009506
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:AB026647 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 eggNOG:NOG235840 HOGENOM:HOG000239819
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:AY057704
            EMBL:BT002214 IPI:IPI00524418 RefSeq:NP_001030764.1
            RefSeq:NP_566763.1 UniGene:At.20203 ProteinModelPortal:Q9LSE7
            PaxDb:Q9LSE7 PRIDE:Q9LSE7 EnsemblPlants:AT3G25290.1
            EnsemblPlants:AT3G25290.2 GeneID:822123 KEGG:ath:AT3G25290
            TAIR:At3g25290 InParanoid:Q9LSE7 OMA:FTLATIQ PhylomeDB:Q9LSE7
            ProtClustDB:CLSN2685792 Genevestigator:Q9LSE7 Uniprot:Q9LSE7
        Length = 393

 Score = 253 (94.1 bits), Expect = 1.7e-21, P = 1.7e-21
 Identities = 47/143 (32%), Positives = 72/143 (50%)

Query:    71 ARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFA 130
             ARY+R F      W  LH+ CQ S Y++G  GW  GL LGN S+      HR +GI +F 
Sbjct:   239 ARYMRVFDSADPAWFYLHVSCQFSAYVIGVAGWATGLKLGNESEGIRFSAHRNIGIALFT 298

Query:   131 FATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEKWKWXXX 190
              ATIQ+    L+P+++++   +W I+H  +GY ++ L I N+F+G+      + +K    
Sbjct:   299 LATIQMFAMLLRPKKDHKYRFYWNIYHHGVGYAILTLGIINVFKGLNILKPQDTYKTAYI 358

Query:   191 XXXXXXXXXXXXXEIFRWIVKSK 213
                          E   W+V  K
Sbjct:   359 AVIAVLGGIALLLEAITWVVVLK 381


>TAIR|locus:2049254 [details] [associations]
            symbol:AT2G04850 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002685 InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939
            EMBL:AC006955 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            InterPro:IPR017214 Pfam:PF04526 PIRSF:PIRSF037471 EMBL:BT025973
            IPI:IPI00543883 PIR:C84462 RefSeq:NP_565316.1 UniGene:At.41253
            UniGene:At.68913 ProteinModelPortal:Q9SJ74
            EnsemblPlants:AT2G04850.1 GeneID:815031 KEGG:ath:AT2G04850
            TAIR:At2g04850 InParanoid:Q9SJ74 OMA:GYSPTIH PhylomeDB:Q9SJ74
            ProtClustDB:CLSN2687971 ArrayExpress:Q9SJ74 Genevestigator:Q9SJ74
            Uniprot:Q9SJ74
        Length = 404

 Score = 218 (81.8 bits), Expect = 1.9e-17, P = 1.9e-17
 Identities = 39/105 (37%), Positives = 62/105 (59%)

Query:    71 ARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFA 130
             ARYLR+       W  +H   Q++G++LGT+G+ IG+ LG++S   T   HR LGI  F 
Sbjct:   238 ARYLRQMQSIGPTWFYIHAAIQLTGFLLGTIGFSIGIVLGHNSPGVTYGLHRSLGIATFT 297

Query:   131 FATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQG 175
              A +Q L    +P+  N+  ++W+ +H  +GY  V + + N+FQG
Sbjct:   298 AAALQTLALLFRPKTTNKFRRYWKSYHHFVGYACVVMGVVNVFQG 342


>TAIR|locus:2077690 [details] [associations]
            symbol:AT3G59070 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0007275
            "multicellular organismal development" evidence=ISS] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL163527
            InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939 InterPro:IPR005018
            SMART:SM00664 PROSITE:PS50836 HOGENOM:HOG000239819
            InterPro:IPR017214 Pfam:PF04526 IPI:IPI00548030 PIR:T47789
            RefSeq:NP_191466.1 UniGene:At.66523 ProteinModelPortal:Q9LYS9
            EnsemblPlants:AT3G59070.1 GeneID:825076 KEGG:ath:AT3G59070
            TAIR:At3g59070 eggNOG:NOG249827 InParanoid:Q9LYS9 OMA:TIICCIA
            PhylomeDB:Q9LYS9 ProtClustDB:CLSN2915540 Genevestigator:Q9LYS9
            Uniprot:Q9LYS9
        Length = 466

 Score = 212 (79.7 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 39/118 (33%), Positives = 72/118 (61%)

Query:    71 ARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKT--HRILGILV 128
             ARY++ + +    W  +H++CQ +GY  G +G G+G  +   ++H  ++T  H ++G+L+
Sbjct:   239 ARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIG-GLGTAI-YMARHTGMRTTLHTVIGLLL 296

Query:   129 FAFATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEKWK 186
             FA   +QIL+   +P ++++  K+W  +H +MGY V+ LSI NI++G+        WK
Sbjct:   297 FALGFLQILSLKARPNKDHKYRKYWNWYHHTMGYIVIVLSIYNIYKGLSILQPGSIWK 354


>TAIR|locus:2091097 [details] [associations]
            symbol:AT3G07570 species:3702 "Arabidopsis thaliana"
            [GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
            "membrane" evidence=ISS] [GO:0016132 "brassinosteroid biosynthetic
            process" evidence=RCA] InterPro:IPR004877 Pfam:PF03188 Pfam:PF03351
            GO:GO:0016021 EMBL:CP002686 InterPro:IPR006593 SMART:SM00665
            PROSITE:PS50939 InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836
            eggNOG:NOG281275 EMBL:AK228175 IPI:IPI00547399 RefSeq:NP_566313.2
            UniGene:At.27235 ProteinModelPortal:Q0WRW8 PaxDb:Q0WRW8
            PRIDE:Q0WRW8 EnsemblPlants:AT3G07570.1 GeneID:819948
            KEGG:ath:AT3G07570 OMA:YHHNIGR ProtClustDB:CLSN2690771
            Genevestigator:Q0WRW8 Uniprot:Q0WRW8
        Length = 369

 Score = 161 (61.7 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 35/116 (30%), Positives = 63/116 (54%)

Query:    71 ARYLRRFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFA 130
             AR+++++      W   H+  Q +G++LG  G   GL L N  K   +  H+ LGI +  
Sbjct:   232 ARHMKQWD---PTWFYAHIALQTTGFLLGLTGVICGLVLENRLKANNVSKHKGLGITILV 288

Query:   131 FATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHA-EKW 185
                +Q+L    +P ++++  K+W  +H ++G  ++ L+I+NIF GI H + A   W
Sbjct:   289 MGVLQMLALLARPDKQSKYRKYWNWYHHNIGRLLIILAISNIFYGI-HLAKAGTSW 343


>TAIR|locus:2076770 [details] [associations]
            symbol:AT3G61750 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016020 "membrane"
            evidence=ISS] InterPro:IPR004877 Pfam:PF03188 Pfam:PF03351
            GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR006593 SMART:SM00665 PROSITE:PS50939 EMBL:AL132959
            InterPro:IPR005018 SMART:SM00664 PROSITE:PS50836 eggNOG:NOG281275
            IPI:IPI00534466 PIR:T47967 RefSeq:NP_191734.1 UniGene:At.50302
            ProteinModelPortal:Q9M363 PRIDE:Q9M363 EnsemblPlants:AT3G61750.1
            GeneID:825348 KEGG:ath:AT3G61750 TAIR:At3g61750
            HOGENOM:HOG000238174 InParanoid:Q9M363 OMA:MIYLAFQ PhylomeDB:Q9M363
            ProtClustDB:CLSN2720235 Genevestigator:Q9M363 Uniprot:Q9M363
        Length = 398

 Score = 151 (58.2 bits), Expect = 4.3e-10, P = 4.3e-10
 Identities = 39/139 (28%), Positives = 66/139 (47%)

Query:    71 ARYLR-RFPIEYDEWHPLHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVF 129
             ARYLR + P+    W+ LH+  Q +G+I G     +G+ L N  +   +  HR +GI + 
Sbjct:   239 ARYLRHKDPL----WYYLHIGFQFTGFIFGLAAVILGIQLYNRIQP-DIPAHRGIGIFLL 293

Query:   130 AFATIQILTSFLQPRRENECSKWWEIFHQSMGYTVVALSIANIFQGI-IHQSHAEKWKWX 188
               +T+Q+L  F +P++E +  ++W  +H  +G   +     NI  GI +  +  + WK  
Sbjct:   294 VLSTLQVLAFFARPQKETKMRRYWNWYHHWIGRISLFFGAVNIVLGIRMADNGGDGWKIG 353

Query:   189 XXXXXXXXXXXXXXXEIFR 207
                            EIFR
Sbjct:   354 YGFVLSVTLLAFVVLEIFR 372


>TAIR|locus:2052846 [details] [associations]
            symbol:AT2G30890 "AT2G30890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
            InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004669 InterPro:IPR006593
            SMART:SM00665 PROSITE:PS50939 EMBL:BT010412 EMBL:AK176781
            IPI:IPI00539787 PIR:H84713 RefSeq:NP_180646.1 UniGene:At.48532
            EnsemblPlants:AT2G30890.1 GeneID:817639 KEGG:ath:AT2G30890
            TAIR:At2g30890 eggNOG:NOG308789 HOGENOM:HOG000238150
            InParanoid:O80854 OMA:PANDHKE PhylomeDB:O80854
            ProtClustDB:CLSN2912938 ArrayExpress:O80854 Genevestigator:O80854
            Uniprot:O80854
        Length = 257

 Score = 114 (45.2 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 31/98 (31%), Positives = 54/98 (55%)

Query:    87 LHMLCQISGYILGTVGWGIGLWLGNSSKHYTLKTHRILGILVFAFATIQILTSFLQPRRE 146
             LH+  Q+   IL T+G  + +   N+S  ++   H+ LGI ++     Q L  FL+P RE
Sbjct:    94 LHVTSQMVAVILVTIGAVMSVINFNNS--FS-NHHQQLGIGLYVIVWFQALLGFLRPPRE 150

Query:   147 NECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEK 184
              +  + W + H  +G ++  L I NI+ G+ H ++A+K
Sbjct:   151 EKARRKWFVGHWILGTSIAILGIINIYTGL-H-AYAKK 186


>TAIR|locus:2141882 [details] [associations]
            symbol:AT4G18260 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016020 "membrane" evidence=ISS]
            InterPro:IPR004877 Pfam:PF03188 GO:GO:0016021 EMBL:CP002687
            GenomeReviews:CT486007_GR InterPro:IPR006593 SMART:SM00665
            PROSITE:PS50939 EMBL:AL161548 EMBL:AL021713 IPI:IPI00519587
            PIR:T04928 RefSeq:NP_193560.1 UniGene:At.43247 PaxDb:O49729
            PRIDE:O49729 EnsemblPlants:AT4G18260.1 GeneID:827552
            KEGG:ath:AT4G18260 TAIR:At4g18260 eggNOG:NOG261994
            HOGENOM:HOG000114729 InParanoid:O49729 OMA:TESSIMP PhylomeDB:O49729
            ProtClustDB:CLSN2686045 ArrayExpress:O49729 Genevestigator:O49729
            Uniprot:O49729
        Length = 545

 Score = 110 (43.8 bits), Expect = 0.00087, P = 0.00087
 Identities = 31/99 (31%), Positives = 52/99 (52%)

Query:    87 LHMLCQISGYILGTVGWGIGL-WLGNSSKHYTLKTHRILGILVFAFATIQILTSFLQPRR 145
             LH++ QI   +L T+G  + L  L NS  +     H+ LG+ ++A   +Q LT   +P R
Sbjct:   102 LHVIFQILAVVLATIGAILSLRTLENSFDN----NHQRLGLALYAAMWLQFLTGVFKPSR 157

Query:   146 ENECSKWWEIFHQSMGYTVVALSIANIFQGIIHQSHAEK 184
              ++    W + H  +G  V  + I NI+ GI  Q++ +K
Sbjct:   158 GSKRRLRWFLLHWILGTIVSIVGIVNIYTGI--QAYQKK 194


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.447    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      229       195   0.00078  111 3  11 22  0.41    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  11
  No. of states in DFA:  621 (66 KB)
  Total size of DFA:  207 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.64u 0.12s 15.76t   Elapsed:  00:00:01
  Total cpu time:  15.64u 0.12s 15.76t   Elapsed:  00:00:01
  Start:  Fri May 10 20:32:36 2013   End:  Fri May 10 20:32:37 2013

Back to top