Query 048294
Match_columns 375
No_of_seqs 166 out of 1525
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 14:10:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e31_A FBS1, F-box only protei 99.1 1.6E-11 5.4E-16 110.0 2.2 50 3-52 49-99 (297)
2 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3E-11 1E-15 79.8 1.3 43 4-46 8-50 (53)
3 3ii7_A Kelch-like protein 7; p 99.0 1.5E-07 5.2E-12 85.5 23.6 210 103-336 50-279 (306)
4 1zgk_A Kelch-like ECH-associat 99.0 3E-07 1E-11 83.7 24.2 209 103-336 65-294 (308)
5 4asc_A Kelch repeat and BTB do 98.9 2.5E-07 8.6E-12 84.5 23.1 196 119-336 68-284 (315)
6 2xn4_A Kelch-like protein 2; s 98.9 5.3E-07 1.8E-11 81.7 25.1 209 103-336 56-283 (302)
7 2vpj_A Kelch-like protein 12; 98.9 4.8E-07 1.6E-11 81.9 23.6 209 103-336 57-285 (301)
8 2woz_A Kelch repeat and BTB do 98.9 4E-07 1.4E-11 83.2 22.8 193 120-335 80-293 (318)
9 2vpj_A Kelch-like protein 12; 98.8 3.8E-06 1.3E-10 75.9 25.6 213 119-356 32-261 (301)
10 3ii7_A Kelch-like protein 7; p 98.7 2.4E-06 8.3E-11 77.4 22.5 213 118-356 24-255 (306)
11 2uvk_A YJHT; unknown function, 98.7 1.8E-06 6.1E-11 80.1 21.1 238 103-356 14-324 (357)
12 2xn4_A Kelch-like protein 2; s 98.7 5.3E-06 1.8E-10 75.0 23.0 213 119-356 31-259 (302)
13 1zgk_A Kelch-like ECH-associat 98.7 2E-06 6.9E-11 78.1 19.0 218 118-356 39-270 (308)
14 4asc_A Kelch repeat and BTB do 98.6 5.3E-06 1.8E-10 75.5 21.9 200 118-336 13-228 (315)
15 2ovr_B FBW7, F-BOX/WD repeat p 98.6 1.4E-05 4.7E-10 76.1 24.0 47 4-50 18-64 (445)
16 3v7d_B Cell division control p 98.5 4.3E-05 1.5E-09 73.0 25.5 44 6-49 16-60 (464)
17 2woz_A Kelch repeat and BTB do 98.5 1.2E-05 4E-10 73.3 19.2 230 108-357 15-262 (318)
18 2uvk_A YJHT; unknown function, 98.5 2.1E-05 7.3E-10 72.8 20.7 218 103-336 60-349 (357)
19 1p22_A F-BOX/WD-repeat protein 98.5 1.3E-05 4.6E-10 76.1 19.6 45 6-50 12-60 (435)
20 2zwa_A Leucine carboxyl methyl 98.4 1.4E-05 4.7E-10 81.1 20.0 214 107-338 396-644 (695)
21 3l2o_B F-box only protein 4; s 97.9 3E-06 1E-10 75.1 1.1 50 4-53 4-53 (312)
22 1k3i_A Galactose oxidase precu 97.5 0.0018 6.1E-08 65.1 16.0 197 120-334 168-383 (656)
23 2zwa_A Leucine carboxyl methyl 97.4 0.0016 5.4E-08 66.0 13.7 168 181-357 411-616 (695)
24 2ast_B S-phase kinase-associat 97.4 2.5E-05 8.5E-10 71.6 0.4 42 3-44 7-48 (336)
25 1k3i_A Galactose oxidase precu 97.4 0.002 6.8E-08 64.8 13.6 193 119-336 220-448 (656)
26 2p1m_B Transport inhibitor res 96.7 0.00025 8.5E-09 70.1 -0.4 35 4-38 5-40 (594)
27 3ogk_B Coronatine-insensitive 96.2 0.00067 2.3E-08 67.0 -0.4 34 5-38 13-47 (592)
28 2z2n_A Virginiamycin B lyase; 95.5 1.1 3.7E-05 38.8 20.0 190 106-333 107-299 (299)
29 3jrp_A Fusion protein of prote 93.3 4.2 0.00014 36.2 18.1 138 183-331 80-242 (379)
30 3jro_A Fusion protein of prote 91.8 8.8 0.0003 38.6 18.3 66 264-331 169-240 (753)
31 1q7f_A NHL, brain tumor CG1071 91.4 6.2 0.00021 33.8 21.9 189 107-329 87-280 (286)
32 3dsm_A Uncharacterized protein 91.1 7.8 0.00027 34.4 22.7 198 108-337 2-221 (328)
33 3e5z_A Putative gluconolactona 90.5 8 0.00027 33.4 22.4 197 110-338 42-255 (296)
34 4gga_A P55CDC, cell division c 90.3 11 0.00037 34.6 21.5 197 106-335 114-316 (420)
35 1rwi_B Serine/threonine-protei 87.8 11 0.00039 31.6 18.4 185 106-331 75-266 (270)
36 3hfq_A Uncharacterized protein 87.1 15 0.00052 32.3 22.8 74 262-336 248-326 (347)
37 4aez_A CDC20, WD repeat-contai 86.7 18 0.00061 32.8 21.9 195 104-334 99-298 (401)
38 2qc5_A Streptogramin B lactona 86.1 15 0.00051 31.2 19.3 184 107-328 113-299 (300)
39 3hfq_A Uncharacterized protein 84.6 12 0.00041 33.0 12.3 105 230-335 16-124 (347)
40 2z2n_A Virginiamycin B lyase; 84.6 18 0.0006 30.8 21.1 195 103-337 62-262 (299)
41 3dsm_A Uncharacterized protein 82.9 24 0.00083 31.1 20.6 194 107-333 52-257 (328)
42 3scy_A Hypothetical bacterial 82.4 26 0.00088 31.0 14.5 116 216-336 220-346 (361)
43 2ojh_A Uncharacterized protein 82.2 21 0.00072 29.9 17.3 199 106-336 50-265 (297)
44 4e54_B DNA damage-binding prot 81.9 31 0.0011 31.6 16.6 57 276-334 377-435 (435)
45 4e54_B DNA damage-binding prot 80.6 31 0.0011 31.6 13.9 195 108-333 131-331 (435)
46 1k8k_C P40, ARP2/3 complex 41 80.5 29 0.001 30.4 16.4 68 264-335 213-282 (372)
47 3ei3_B DNA damage-binding prot 80.4 31 0.0011 30.7 18.4 192 110-332 88-285 (383)
48 3q7m_A Lipoprotein YFGL, BAMB; 80.4 32 0.0011 30.7 14.0 110 213-335 49-168 (376)
49 3fm0_A Protein CIAO1; WDR39,SG 78.5 35 0.0012 30.1 14.2 69 264-334 116-186 (345)
50 2qc5_A Streptogramin B lactona 78.4 30 0.001 29.3 20.7 193 103-336 25-224 (300)
51 1q7f_A NHL, brain tumor CG1071 78.3 30 0.001 29.3 23.5 202 106-337 38-246 (286)
52 1k8k_C P40, ARP2/3 complex 41 78.0 24 0.0008 31.0 11.8 99 230-331 28-129 (372)
53 4gqb_B Methylosome protein 50; 76.7 40 0.0014 29.9 18.2 198 106-335 91-295 (344)
54 3q7m_A Lipoprotein YFGL, BAMB; 76.4 42 0.0014 29.9 21.3 192 103-335 98-302 (376)
55 3o4h_A Acylamino-acid-releasin 76.1 56 0.0019 31.2 14.9 186 109-335 123-320 (582)
56 3g4e_A Regucalcin; six bladed 75.7 38 0.0013 29.1 21.0 198 108-338 24-239 (297)
57 3mmy_A MRNA export factor; mRN 75.6 40 0.0014 29.3 17.2 29 305-333 279-308 (368)
58 1ri6_A Putative isomerase YBHE 74.2 42 0.0014 28.9 21.8 147 183-336 152-317 (343)
59 2dg1_A DRP35, lactonase; beta 73.7 41 0.0014 29.1 12.1 113 216-335 54-177 (333)
60 3bws_A Protein LP49; two-domai 73.5 44 0.0015 30.2 12.6 186 119-335 102-298 (433)
61 3hrp_A Uncharacterized protein 68.9 70 0.0024 29.2 13.8 110 216-335 140-255 (409)
62 2be1_A Serine/threonine-protei 68.1 37 0.0013 30.5 10.3 114 108-244 10-133 (339)
63 3dwl_C Actin-related protein 2 67.1 66 0.0023 28.2 12.4 66 264-331 216-283 (377)
64 3e5z_A Putative gluconolactona 66.6 60 0.002 27.6 19.7 202 103-334 74-291 (296)
65 3dr2_A Exported gluconolactona 66.4 63 0.0022 27.8 21.2 103 231-338 168-276 (305)
66 3g4e_A Regucalcin; six bladed 61.7 76 0.0026 27.1 13.6 106 213-329 18-139 (297)
67 3mbr_X Glutamine cyclotransfer 61.6 75 0.0026 27.0 14.2 114 213-337 25-142 (243)
68 3vgz_A Uncharacterized protein 61.5 79 0.0027 27.2 26.6 203 106-334 97-308 (353)
69 4a2l_A BT_4663, two-component 60.5 1.4E+02 0.0048 29.8 19.7 140 183-332 378-529 (795)
70 1kv9_A Type II quinohemoprotei 59.3 1.1E+02 0.0036 30.2 12.7 112 213-335 62-193 (668)
71 3jrp_A Fusion protein of prote 59.3 89 0.003 27.1 13.1 65 265-331 69-136 (379)
72 2hqs_A Protein TOLB; TOLB, PAL 59.2 1E+02 0.0036 27.9 19.6 185 118-336 159-351 (415)
73 3dwl_C Actin-related protein 2 58.1 16 0.00053 32.5 6.0 137 183-330 34-178 (377)
74 3no2_A Uncharacterized protein 57.9 88 0.003 26.7 16.1 185 110-334 7-200 (276)
75 4ggc_A P55CDC, cell division c 57.3 87 0.003 26.4 21.4 27 106-133 34-60 (318)
76 1r5m_A SIR4-interacting protei 57.2 1E+02 0.0035 27.2 17.3 189 104-328 213-424 (425)
77 1rwi_B Serine/threonine-protei 56.1 85 0.0029 25.9 20.2 192 103-335 29-228 (270)
78 1l0q_A Surface layer protein; 55.3 1.1E+02 0.0037 26.9 21.0 187 110-334 3-194 (391)
79 1ri6_A Putative isomerase YBHE 54.8 1E+02 0.0034 26.3 17.0 110 217-334 48-166 (343)
80 2ad6_A Methanol dehydrogenase 54.4 1.2E+02 0.004 29.3 11.9 109 213-334 58-190 (571)
81 2iwa_A Glutamine cyclotransfer 53.8 1.1E+02 0.0037 26.4 12.7 110 218-337 32-144 (266)
82 1kb0_A Quinohemoprotein alcoho 52.7 83 0.0028 31.1 10.7 111 213-334 73-204 (677)
83 3fvz_A Peptidyl-glycine alpha- 52.7 1.2E+02 0.0039 26.4 16.5 202 107-329 100-322 (329)
84 1nir_A Nitrite reductase; hemo 52.4 1.6E+02 0.0055 28.0 12.7 113 217-333 334-462 (543)
85 1yfq_A Cell cycle arrest prote 52.3 1.1E+02 0.0038 26.1 17.0 100 230-333 168-286 (342)
86 3nol_A Glutamine cyclotransfer 51.6 1.2E+02 0.004 26.1 12.8 113 214-337 49-164 (262)
87 3nok_A Glutaminyl cyclase; bet 51.3 1.2E+02 0.0041 26.2 10.5 111 213-337 59-173 (268)
88 3i2n_A WD repeat-containing pr 51.2 1.2E+02 0.004 26.0 19.5 65 264-330 270-354 (357)
89 3vl1_A 26S proteasome regulato 50.7 1.3E+02 0.0046 26.6 18.9 96 230-329 311-419 (420)
90 3jro_A Fusion protein of prote 50.5 1.8E+02 0.0063 28.8 13.0 98 231-331 30-134 (753)
91 2fp8_A Strictosidine synthase; 50.4 1.2E+02 0.0042 26.1 11.7 110 217-335 29-180 (322)
92 1yiq_A Quinohemoprotein alcoho 50.4 1.4E+02 0.0047 29.6 11.9 112 213-334 66-197 (689)
93 4a11_B DNA excision repair pro 50.2 1.3E+02 0.0045 26.3 18.0 68 264-333 256-327 (408)
94 3u4y_A Uncharacterized protein 50.0 1.2E+02 0.0041 25.8 23.5 191 108-332 9-210 (331)
95 3v65_B Low-density lipoprotein 49.6 1.5E+02 0.005 26.7 18.7 103 108-243 87-192 (386)
96 3mmy_A MRNA export factor; mRN 48.9 1.3E+02 0.0044 25.8 12.3 70 265-336 54-124 (368)
97 3fvz_A Peptidyl-glycine alpha- 48.4 1.3E+02 0.0046 25.9 17.9 190 119-335 70-283 (329)
98 1jmx_B Amine dehydrogenase; ox 48.4 1.3E+02 0.0044 25.7 10.9 109 217-331 10-136 (349)
99 3f3f_A Nucleoporin SEH1; struc 46.4 1.3E+02 0.0045 25.3 13.3 109 217-331 22-145 (351)
100 3k26_A Polycomb protein EED; W 46.2 1.4E+02 0.0048 25.5 18.9 63 265-329 299-366 (366)
101 2ghs_A AGR_C_1268P; regucalcin 44.6 1.6E+02 0.0053 25.6 12.3 102 218-335 61-174 (326)
102 1npe_A Nidogen, entactin; glyc 44.6 1.4E+02 0.0046 24.9 21.7 193 106-337 45-247 (267)
103 3iuj_A Prolyl endopeptidase; h 44.5 2.4E+02 0.0081 27.7 19.0 112 217-336 291-412 (693)
104 1evh_A WH1 domain, protein (ME 44.0 26 0.00088 25.9 4.0 41 119-168 12-52 (112)
105 2aq5_A Coronin-1A; WD40 repeat 43.8 1.7E+02 0.0059 25.9 22.3 204 108-336 93-308 (402)
106 3dr2_A Exported gluconolactona 43.7 1.3E+02 0.0043 25.8 9.5 110 217-336 55-185 (305)
107 4a2l_A BT_4663, two-component 43.7 2.6E+02 0.0088 27.9 21.0 203 107-336 272-487 (795)
108 4aez_A CDC20, WD repeat-contai 42.8 1.8E+02 0.0062 25.8 23.1 100 231-334 283-385 (401)
109 1n7d_A LDL receptor, low-densi 42.3 2.6E+02 0.0091 27.6 14.2 109 213-334 500-619 (699)
110 3mkq_A Coatomer beta'-subunit; 42.0 2.6E+02 0.009 27.5 21.7 192 106-334 64-264 (814)
111 3fm0_A Protein CIAO1; WDR39,SG 41.5 1.8E+02 0.006 25.3 18.2 62 264-327 161-223 (345)
112 1gxr_A ESG1, transducin-like e 39.9 1.7E+02 0.0058 24.6 22.3 187 108-334 108-301 (337)
113 3v9f_A Two-component system se 39.7 2.9E+02 0.01 27.4 18.7 111 213-336 367-485 (781)
114 1gxr_A ESG1, transducin-like e 38.3 1.8E+02 0.0061 24.5 21.6 197 105-335 59-261 (337)
115 3tc9_A Hypothetical hydrolase; 38.1 2.4E+02 0.0081 25.8 12.8 109 217-334 149-262 (430)
116 1flg_A Protein (quinoprotein e 38.1 2.8E+02 0.0096 26.7 11.7 113 213-335 64-199 (582)
117 1pby_B Quinohemoprotein amine 37.7 1.8E+02 0.0063 24.4 11.1 98 233-337 220-319 (337)
118 3lrv_A PRE-mRNA-splicing facto 37.3 2E+02 0.0069 24.8 10.5 97 230-331 147-246 (343)
119 4hw6_A Hypothetical protein, I 36.8 2.5E+02 0.0086 25.7 11.8 112 213-332 143-262 (433)
120 1egx_A VAsp, vasodilator-stimu 36.6 31 0.001 25.6 3.5 42 119-168 12-53 (115)
121 2bkl_A Prolyl endopeptidase; m 36.5 3.1E+02 0.011 26.7 21.2 142 183-336 253-404 (695)
122 2kwv_A RAD30 homolog B, DNA po 36.3 15 0.00053 22.1 1.4 16 6-21 22-37 (48)
123 3sre_A PON1, serum paraoxonase 36.3 2.4E+02 0.0081 25.3 15.1 199 108-328 60-297 (355)
124 4gga_A P55CDC, cell division c 36.3 2.3E+02 0.008 25.2 13.6 87 244-334 94-183 (420)
125 3v9f_A Two-component system se 36.0 3.3E+02 0.011 26.9 20.7 204 106-336 321-531 (781)
126 1w6s_A Methanol dehydrogenase 35.0 2.6E+02 0.009 27.0 10.9 29 213-246 58-90 (599)
127 2aq5_A Coronin-1A; WD40 repeat 35.0 2.4E+02 0.0081 24.9 19.7 96 231-331 153-256 (402)
128 2dg1_A DRP35, lactonase; beta 34.3 2.2E+02 0.0074 24.3 21.1 205 106-337 53-271 (333)
129 3scy_A Hypothetical bacterial 33.5 2.3E+02 0.008 24.4 12.9 96 230-329 27-129 (361)
130 2dk7_A Transcription elongatio 33.5 36 0.0012 22.9 3.0 21 313-333 23-43 (73)
131 1sq9_A Antiviral protein SKI8; 33.0 2.4E+02 0.0084 24.5 19.3 59 275-333 205-271 (397)
132 2hqs_A Protein TOLB; TOLB, PAL 32.7 2.8E+02 0.0094 25.0 21.9 186 118-337 203-395 (415)
133 3m0c_C LDL receptor, low-densi 32.3 4.1E+02 0.014 26.8 15.8 80 182-272 537-620 (791)
134 3sjl_D Methylamine dehydrogena 32.2 2.9E+02 0.0099 25.1 12.0 118 216-339 236-374 (386)
135 1n7d_A LDL receptor, low-densi 32.2 3.6E+02 0.012 26.6 11.6 29 213-245 544-575 (699)
136 1pgu_A Actin interacting prote 32.2 3.2E+02 0.011 25.5 17.1 97 230-330 508-615 (615)
137 2oiz_A Aromatic amine dehydrog 31.5 1.2E+02 0.004 27.0 7.3 56 279-336 286-341 (361)
138 2z3z_A Dipeptidyl aminopeptida 31.1 3.7E+02 0.013 25.9 19.6 191 118-332 235-438 (706)
139 4g56_B MGC81050 protein; prote 31.0 2.7E+02 0.0091 24.3 18.7 196 106-334 103-306 (357)
140 2ovr_B FBW7, F-BOX/WD repeat p 31.0 2.9E+02 0.01 24.7 22.0 111 213-330 324-443 (445)
141 3u4y_A Uncharacterized protein 30.8 2.4E+02 0.0083 23.8 22.2 113 216-336 185-311 (331)
142 1l0q_A Surface layer protein; 30.2 2.7E+02 0.0094 24.2 20.8 191 105-333 39-237 (391)
143 1ddw_A GLGF-domain protein hom 29.8 93 0.0032 23.2 5.2 39 119-168 12-51 (120)
144 4gqb_B Methylosome protein 50; 29.5 2.8E+02 0.0097 24.1 10.1 59 275-334 101-163 (344)
145 3k26_A Polycomb protein EED; W 28.5 2.7E+02 0.0093 23.6 18.4 65 265-331 241-320 (366)
146 3lrv_A PRE-mRNA-splicing facto 28.0 2.9E+02 0.0098 23.7 18.5 199 103-334 89-299 (343)
147 1yfq_A Cell cycle arrest prote 27.4 2.8E+02 0.0095 23.4 12.6 70 264-336 22-96 (342)
148 2jp2_A Spred-2, sprouty-relate 26.8 64 0.0022 24.3 3.8 42 119-168 21-65 (126)
149 3v7d_B Cell division control p 26.3 3.5E+02 0.012 24.2 22.9 27 106-132 171-197 (464)
150 2pm9_A Protein WEB1, protein t 26.3 3.3E+02 0.011 23.8 18.1 94 233-331 241-339 (416)
151 3vgz_A Uncharacterized protein 26.0 3E+02 0.01 23.3 20.3 112 217-334 151-267 (353)
152 3hxj_A Pyrrolo-quinoline quino 25.9 2.9E+02 0.0099 23.2 8.8 103 217-336 70-173 (330)
153 2mad_H Methylamine dehydrogena 25.1 3.6E+02 0.012 23.9 13.3 56 279-335 298-356 (373)
154 3bg1_A Protein SEC13 homolog; 24.5 3.2E+02 0.011 23.1 15.4 55 275-329 187-247 (316)
155 2hes_X YDR267CP; beta-propelle 24.2 3.3E+02 0.011 23.2 10.9 62 275-336 127-191 (330)
156 1pjx_A Dfpase, DIISOPROPYLFLUO 24.1 3.1E+02 0.011 22.8 22.8 195 116-337 44-265 (314)
157 2ojh_A Uncharacterized protein 24.0 2.9E+02 0.0098 22.4 20.8 184 118-336 22-213 (297)
158 3zwl_B Eukaryotic translation 23.1 3.4E+02 0.012 22.9 23.5 67 264-334 186-254 (369)
159 3frx_A Guanine nucleotide-bind 23.1 3.5E+02 0.012 23.0 10.0 66 266-333 31-100 (319)
160 1yr2_A Prolyl oligopeptidase; 22.6 5.5E+02 0.019 25.1 18.6 141 182-335 294-447 (741)
161 3v64_C Agrin; beta propeller, 22.2 4E+02 0.014 23.3 20.4 104 108-244 44-150 (349)
162 3no2_A Uncharacterized protein 22.2 3.5E+02 0.012 22.7 15.6 141 181-337 14-163 (276)
163 1sq9_A Antiviral protein SKI8; 22.2 3.8E+02 0.013 23.1 17.5 98 232-331 258-397 (397)
164 2pm7_B Protein transport prote 22.0 3.5E+02 0.012 22.6 11.5 108 217-330 20-133 (297)
165 3v65_B Low-density lipoprotein 21.8 4.3E+02 0.015 23.5 19.1 191 107-336 126-326 (386)
166 4ggc_A P55CDC, cell division c 21.7 3.4E+02 0.012 22.4 14.2 59 276-334 44-103 (318)
167 1i2h_A PSD-ZIP45(homer-1C/VESL 21.4 1.4E+02 0.0047 23.8 4.9 39 119-168 17-56 (168)
168 3odt_A Protein DOA1; ubiquitin 21.4 3.4E+02 0.012 22.3 23.2 188 106-333 27-218 (313)
169 3hrp_A Uncharacterized protein 21.1 4.5E+02 0.016 23.6 21.7 197 106-336 139-361 (409)
170 3vl1_A 26S proteasome regulato 20.9 4.2E+02 0.014 23.1 22.5 195 107-336 107-331 (420)
171 1got_B GT-beta; complex (GTP-b 20.9 4E+02 0.014 22.8 13.1 112 217-335 66-179 (340)
172 2pm9_A Protein WEB1, protein t 20.4 3.2E+02 0.011 23.8 8.1 66 264-331 78-147 (416)
173 3m0c_C LDL receptor, low-densi 20.4 6.6E+02 0.023 25.2 22.8 137 181-333 492-636 (791)
174 2ysi_A Transcription elongatio 20.1 78 0.0027 18.3 2.5 17 317-333 17-33 (40)
No 1
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.11 E-value=1.6e-11 Score=109.96 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=46.9
Q ss_pred ccCCCchHHHHHHHHccCCccccc-eeeeccccchhhcCChHHHHHHhhcc
Q 048294 3 ISTGDFYEDAVRAILLKQPVKSLL-RFKCVCKSWYALFEDSMFIREHLKNE 52 (375)
Q Consensus 3 ~~~~~LP~Dll~eIL~rLP~ksl~-r~r~VcK~W~~li~~p~F~~~~~~~~ 52 (375)
..+..||+||+.+||+|||+++|+ ||++|||+|+++|+++.|.+.+..+.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 466799999999999999999999 99999999999999999999998765
No 2
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.05 E-value=3e-11 Score=79.82 Aligned_cols=43 Identities=26% Similarity=0.432 Sum_probs=39.1
Q ss_pred cCCCchHHHHHHHHccCCccccceeeeccccchhhcCChHHHH
Q 048294 4 STGDFYEDAVRAILLKQPVKSLLRFKCVCKSWYALFEDSMFIR 46 (375)
Q Consensus 4 ~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~ 46 (375)
....||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 5678999999999999999999999999999999999998754
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.99 E-value=1.5e-07 Score=85.47 Aligned_cols=210 Identities=12% Similarity=-0.038 Sum_probs=132.1
Q ss_pred EeeeecceEEEeeC-----CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCC
Q 048294 103 AGGPYDGIFCILGN-----DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSD 177 (375)
Q Consensus 103 ~~~s~nGLl~~~~~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 177 (375)
.....+|.|.+..+ ...+.++||.|++|..+|+.+... .... ...++ =+++.+......
T Consensus 50 ~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~--~~~~~-----~~iyv~GG~~~~---- 113 (306)
T 3ii7_A 50 ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR-----DSLA--ACAAE-----GKIYTSGGSEVG---- 113 (306)
T ss_dssp EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC-----BSCE--EEEET-----TEEEEECCBBTT----
T ss_pred EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc-----ccee--EEEEC-----CEEEEECCCCCC----
Confidence 44456776655442 246899999999999998776421 1111 11122 255555443211
Q ss_pred CCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccC-C----ceEEEEEECCCceeeeec-CCC
Q 048294 178 LYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSN-G----HKVVLSFDLGDEVYEEIQ-GPC 251 (375)
Q Consensus 178 ~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~----~~~il~fDl~~e~~~~i~-lP~ 251 (375)
......+++|+..+++|+.+...+.+.. ... ++.++|.+|.+...... . ...+..||+.+++|+.++ +|.
T Consensus 114 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 189 (306)
T 3ii7_A 114 NSALYLFECYDTRTESWHTKPSMLTQRC---SHG-MVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIE 189 (306)
T ss_dssp BSCCCCEEEEETTTTEEEEECCCSSCCB---SCE-EEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSS
T ss_pred CcEeeeEEEEeCCCCceEeCCCCcCCcc---eeE-EEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccc
Confidence 1235689999999999999976654322 122 78889999998843221 1 457899999999999884 443
Q ss_pred CCCCccceeEEecCeEEEEEecCCC-cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeE
Q 048294 252 LPQSVYVVMGLYKECISLLVLKTIE-FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQM 322 (375)
Q Consensus 252 ~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~ 322 (375)
... ...+...+|+|.++...... ..-++|+++- ..|++.-.++.. .....++.-++.+++.-. ...+
T Consensus 190 ~r~--~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~ 265 (306)
T 3ii7_A 190 ARK--NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK--GVTVKCAAVGSIVYVLAGFQGVGRLGHI 265 (306)
T ss_dssp CCB--SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC--BSCCEEEEETTEEEEEECBCSSSBCCEE
T ss_pred hhh--cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC--ccceeEEEECCEEEEEeCcCCCeeeeeE
Confidence 322 22344679998888664322 2245777776 889987544322 122222333566655532 2578
Q ss_pred EEEeCCCCcEEEEE
Q 048294 323 ILYDPRTEEMKNFG 336 (375)
Q Consensus 323 ~~yd~~~~~~~~v~ 336 (375)
..||+++++|+++.
T Consensus 266 ~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 266 LEYNTETDKWVANS 279 (306)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEcCCCCeEEeCC
Confidence 99999999999986
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.95 E-value=3e-07 Score=83.71 Aligned_cols=209 Identities=11% Similarity=0.059 Sum_probs=130.4
Q ss_pred EeeeecceEEEeeCC----------CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEec
Q 048294 103 AGGPYDGIFCILGND----------NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWD 172 (375)
Q Consensus 103 ~~~s~nGLl~~~~~~----------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~ 172 (375)
-....+|.|.+..+. +.++++||.|++|..+|+++... .... ...++ =|++.+.....
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~--~~~~~-----~~iyv~GG~~~ 132 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPR-----NRIG--VGVID-----GHIYAVGGSHG 132 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCC-----BTCE--EEEET-----TEEEEECCEET
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCc-----cccE--EEEEC-----CEEEEEcCCCC
Confidence 344557766554321 35899999999999999776521 1111 11122 15665543322
Q ss_pred CCCCCCCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeec-cCCceEEEEEECCCceeeeec-CC
Q 048294 173 EKNSDLYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELR-SNGHKVVLSFDLGDEVYEEIQ-GP 250 (375)
Q Consensus 173 ~~~~~~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~il~fDl~~e~~~~i~-lP 250 (375)
. .....+++|+..+++|+.+...+.+.. ... ++.++|.+|-+.... ......+..||+.+++|..++ +|
T Consensus 133 ~-----~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 203 (308)
T 1zgk_A 133 C-----IHHNSVERYEPERDEWHLVAPMLTRRI---GVG-VAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN 203 (308)
T ss_dssp T-----EECCCEEEEETTTTEEEECCCCSSCCB---SCE-EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS
T ss_pred C-----cccccEEEECCCCCeEeECCCCCcccc---ceE-EEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC
Confidence 1 123579999999999999886543322 122 778899999987421 112457999999999999884 34
Q ss_pred CCCCCccceeEEecCeEEEEEecC-CCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCe
Q 048294 251 CLPQSVYVVMGLYKECISLLVLKT-IEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQ 321 (375)
Q Consensus 251 ~~~~~~~~~l~~~~g~L~l~~~~~-~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~ 321 (375)
.... ...+...+++|.++.... ....-++|+++- ..|++...++... .....+.-++.|++.-. ...
T Consensus 204 ~~r~--~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~ 279 (308)
T 1zgk_A 204 TIRS--GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR--SALGITVHQGRIYVLGGYDGHTFLDS 279 (308)
T ss_dssp SCCB--SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBCSSCBCCE
T ss_pred Cccc--cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc--cceEEEEECCEEEEEcCcCCCcccce
Confidence 3322 123446799998887643 222456777775 8999876443322 22222233566655532 356
Q ss_pred EEEEeCCCCcEEEEE
Q 048294 322 MILYDPRTEEMKNFG 336 (375)
Q Consensus 322 ~~~yd~~~~~~~~v~ 336 (375)
+..||+++++|+++.
T Consensus 280 v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 280 VECYDPDTDTWSEVT 294 (308)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEeecC
Confidence 899999999999985
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.94 E-value=2.5e-07 Score=84.45 Aligned_cols=196 Identities=8% Similarity=-0.054 Sum_probs=124.2
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceeec
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYFE 198 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~~ 198 (375)
.++++||.|++|..+|+.+... ...+... .+ =+++.+....... .......+++|+..+++|+.+.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~--~~-----~~lyv~GG~~~~~--~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR-----CLFGLGE--AL-----NSIYVVGGREIKD--GERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE-----ESCEEEE--ET-----TEEEEECCEESST--TCCBCCCEEEEETTTTEEEECC
T ss_pred ceEEecCCCCeEEECCCCCcch-----hceeEEE--EC-----CEEEEEeCCcCCC--CCcccceEEEECCCCCcEeECC
Confidence 3889999999999998876421 1111111 11 2566664432100 0123567999999999999988
Q ss_pred ccCCcccccCCCCcceEeCccEEEeeee--ccCCceEEEEEECCCceeeeec-CCCCCCCccceeEEecCeEEEEEecCC
Q 048294 199 SFKSSHYHMPWYHDCVNLDGGCYWLLEL--RSNGHKVVLSFDLGDEVYEEIQ-GPCLPQSVYVVMGLYKECISLLVLKTI 275 (375)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~~G~lywl~~~--~~~~~~~il~fDl~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~~ 275 (375)
..+.+.. ... ++.++|.+|.+... .......+..||+.+.+|+.++ +|..... ......+|+|.++.....
T Consensus 134 ~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~ 207 (315)
T 4asc_A 134 PLPYVVY---GHT-VLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL--FGATVHDGRIIVAAGVTD 207 (315)
T ss_dssp CCSSCCB---SCE-EEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEEEEECS
T ss_pred CCCCccc---cee-EEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc--eEEEEECCEEEEEeccCC
Confidence 6554321 122 78899999998843 1122457999999999999884 4443321 234567999999887543
Q ss_pred C-cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec---------------CCeEEEEeCCCCcEEEEE
Q 048294 276 E-FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ---------------SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 276 ~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~---------------~~~~~~yd~~~~~~~~v~ 336 (375)
. ..-++|+++- ..|++.-.++... .....+.-++.+++.-. ...+..||+++++|+++.
T Consensus 208 ~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 208 TGLTSSAEVYSITDNKWAPFEAFPQER--SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp SSEEEEEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred CCccceEEEEECCCCeEEECCCCCCcc--cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 2 3457888876 8999876443221 22222233455544321 135789999999999983
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.94 E-value=5.3e-07 Score=81.67 Aligned_cols=209 Identities=10% Similarity=0.061 Sum_probs=131.6
Q ss_pred EeeeecceEEEeeC------CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCC
Q 048294 103 AGGPYDGIFCILGN------DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNS 176 (375)
Q Consensus 103 ~~~s~nGLl~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 176 (375)
.....+|.|.+..+ ...+.++||.|++|..+|+.+... .... ...++ =+++.+......
T Consensus 56 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~~--~~~~~-----~~iyv~GG~~~~--- 120 (302)
T 2xn4_A 56 GMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR-----STLG--AAVLN-----GLLYAVGGFDGS--- 120 (302)
T ss_dssp EEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC-----BSCE--EEEET-----TEEEEEEEECSS---
T ss_pred eEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc-----cceE--EEEEC-----CEEEEEcCCCCC---
Confidence 34455776665432 135899999999999999776521 1111 11122 156666543322
Q ss_pred CCCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCC---ceEEEEEECCCceeeee-cCCCC
Q 048294 177 DLYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNG---HKVVLSFDLGDEVYEEI-QGPCL 252 (375)
Q Consensus 177 ~~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~---~~~il~fDl~~e~~~~i-~lP~~ 252 (375)
.....+++|+..+++|+.+...+.+.. ... ++.++|.+|-+....... ...+..||+.+++|+.+ ++|..
T Consensus 121 --~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 194 (302)
T 2xn4_A 121 --TGLSSVEAYNIKSNEWFHVAPMNTRRS---SVG-VGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR 194 (302)
T ss_dssp --CEEEEEEEEETTTTEEEEECCCSSCCB---SCE-EEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC
T ss_pred --ccCceEEEEeCCCCeEeecCCCCCccc---Cce-EEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc
Confidence 123579999999999999976543322 122 678899999987432211 35689999999999988 34433
Q ss_pred CCCccceeEEecCeEEEEEecCCC-cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEE
Q 048294 253 PQSVYVVMGLYKECISLLVLKTIE-FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMI 323 (375)
Q Consensus 253 ~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~ 323 (375)
.. ...+...+++|.++...... ..-++|+++- ..|++...++... .....+.-++.+++.-. ...+.
T Consensus 195 r~--~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 270 (302)
T 2xn4_A 195 RS--GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCR--RNAGVCAVNGLLYVVGGDDGSCNLASVE 270 (302)
T ss_dssp CB--SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred cc--cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcc--ccCeEEEECCEEEEECCcCCCcccccEE
Confidence 32 12345679999988764322 2346777776 8999876444322 12222333566655532 24599
Q ss_pred EEeCCCCcEEEEE
Q 048294 324 LYDPRTEEMKNFG 336 (375)
Q Consensus 324 ~yd~~~~~~~~v~ 336 (375)
.||+++++|+.+.
T Consensus 271 ~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 271 YYNPTTDKWTVVS 283 (302)
T ss_dssp EEETTTTEEEECS
T ss_pred EEcCCCCeEEECC
Confidence 9999999999885
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.91 E-value=4.8e-07 Score=81.86 Aligned_cols=209 Identities=11% Similarity=0.045 Sum_probs=130.2
Q ss_pred EeeeecceEEEeeC------CCeEEEEcccccc---eeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecC
Q 048294 103 AGGPYDGIFCILGN------DNRLTLWNPANKE---YRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDE 173 (375)
Q Consensus 103 ~~~s~nGLl~~~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~ 173 (375)
.....+|.|.+..+ ...++++||.|++ |..+++.+... .... ...++ =|++.+......
T Consensus 57 ~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r-----~~~~--~~~~~-----~~lyv~GG~~~~ 124 (301)
T 2vpj_A 57 ASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR-----GLAG--ATTLG-----DMIYVSGGFDGS 124 (301)
T ss_dssp EEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC-----BSCE--EEEET-----TEEEEECCBCSS
T ss_pred cEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc-----ccee--EEEEC-----CEEEEEcccCCC
Confidence 44455676655432 1359999999999 99998776521 1111 11122 255555433221
Q ss_pred CCCCCCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeec-cCCceEEEEEECCCceeeeec-CCC
Q 048294 174 KNSDLYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELR-SNGHKVVLSFDLGDEVYEEIQ-GPC 251 (375)
Q Consensus 174 ~~~~~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~il~fDl~~e~~~~i~-lP~ 251 (375)
.....+++|+..+++|+.+...+.+.. ... ++.++|.+|.+.... ......+..||+.+.+|+.+. +|.
T Consensus 125 -----~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 195 (301)
T 2vpj_A 125 -----RRHTSMERYDPNIDQWSMLGDMQTARE---GAG-LVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMAT 195 (301)
T ss_dssp -----CBCCEEEEEETTTTEEEEEEECSSCCB---SCE-EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSS
T ss_pred -----cccceEEEEcCCCCeEEECCCCCCCcc---cce-EEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCc
Confidence 124579999999999999876543321 122 678899999987421 112457899999999999883 444
Q ss_pred CCCCccceeEEecCeEEEEEecCCC-cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec-C-----CeE
Q 048294 252 LPQSVYVVMGLYKECISLLVLKTIE-FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ-S-----NQM 322 (375)
Q Consensus 252 ~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~-~-----~~~ 322 (375)
... ...+...+++|.++...... ..-++|+++- ..|.+...++... ....++.-++.+++.-. + ..+
T Consensus 196 ~r~--~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~v 271 (301)
T 2vpj_A 196 KRS--GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPR--CYVGATVLRGRLYAIAGYDGNSLLSSI 271 (301)
T ss_dssp CCB--SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCBCSSSBEEEE
T ss_pred ccc--cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcc--cceeEEEECCEEEEEcCcCCCcccccE
Confidence 332 12344679999888765322 2345677765 8999876444322 22222333566655532 1 468
Q ss_pred EEEeCCCCcEEEEE
Q 048294 323 ILYDPRTEEMKNFG 336 (375)
Q Consensus 323 ~~yd~~~~~~~~v~ 336 (375)
..||+++++|+.+.
T Consensus 272 ~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 272 ECYDPIIDSWEVVT 285 (301)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEcCCCCeEEEcC
Confidence 99999999999885
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.89 E-value=4e-07 Score=83.21 Aligned_cols=193 Identities=10% Similarity=0.067 Sum_probs=123.4
Q ss_pred EEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceeecc
Q 048294 120 LTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYFES 199 (375)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~~~ 199 (375)
++++||.|++|..+|+.+... ...+... .+ =+++.+....... ......+++|+..+++|+.+..
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~--~~-----~~iyv~GG~~~~~---~~~~~~~~~yd~~~~~W~~~~~ 144 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSAR-----CLFGLGE--VD-----DKIYVVAGKDLQT---EASLDSVLCYDPVAAKWSEVKN 144 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCB-----CSCEEEE--ET-----TEEEEEEEEBTTT---CCEEEEEEEEETTTTEEEEECC
T ss_pred EEEEeCCCCcEEECCCCCccc-----cccceEE--EC-----CEEEEEcCccCCC---CcccceEEEEeCCCCCEeECCC
Confidence 889999999999998776521 1111111 11 2566665543211 1124579999999999999986
Q ss_pred cCCcccccCCCCcceEeCccEEEeeeec--cCCceEEEEEECCCceeeeec-CCCCCCCccceeEEecCeEEEEEecCCC
Q 048294 200 FKSSHYHMPWYHDCVNLDGGCYWLLELR--SNGHKVVLSFDLGDEVYEEIQ-GPCLPQSVYVVMGLYKECISLLVLKTIE 276 (375)
Q Consensus 200 ~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~il~fDl~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~~~ 276 (375)
.+.+... .. ++.++|.+|.+.... ......+..||+.+.+|+.++ +|..... ..+...+|+|.++......
T Consensus 145 ~p~~r~~---~~-~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~~ 218 (318)
T 2woz_A 145 LPIKVYG---HN-VISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM--FGVAIHKGKIVIAGGVTED 218 (318)
T ss_dssp CSSCEES---CE-EEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS--CEEEEETTEEEEEEEEETT
T ss_pred CCCcccc---cE-EEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc--ceEEEECCEEEEEcCcCCC
Confidence 5543321 22 677999999988431 112456999999999999884 4433221 2345679999998875322
Q ss_pred -cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec---------------CCeEEEEeCCCCcEEEE
Q 048294 277 -FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ---------------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 277 -~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~---------------~~~~~~yd~~~~~~~~v 335 (375)
..-++|+++- ..|++...++... .....+.-++.+++.-. ...+..||+++++|+++
T Consensus 219 ~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 219 GLSASVEAFDLKTNKWEVMTEFPQER--SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEEEEEEETTTCCEEECCCCSSCC--BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CccceEEEEECCCCeEEECCCCCCcc--cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 3357788776 8899875544321 12222333566655421 24689999999999998
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.80 E-value=3.8e-06 Score=75.88 Aligned_cols=213 Identities=10% Similarity=0.060 Sum_probs=131.1
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCC---ce
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNS---WR 195 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~---Wr 195 (375)
.++++||.|++|..+|..+... ...+ ....+ =+++.+...... .....+++|+..+++ |+
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~--~~~~~-----~~l~v~GG~~~~-----~~~~~~~~~d~~~~~~~~W~ 94 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKR-----RYVA--SVSLH-----DRIYVIGGYDGR-----SRLSSVECLDYTADEDGVWY 94 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCC-----BSCE--EEEET-----TEEEEECCBCSS-----CBCCCEEEEETTCCTTCCCE
T ss_pred EEEEEcCCCCeEEeCCCCChhh-----cccc--EEEEC-----CEEEEEcCCCCC-----ccCceEEEEECCCCCCCeeE
Confidence 5899999999999999765421 1111 11122 145555432211 124578999999999 99
Q ss_pred eecccCCcccccCCCCcceEeCccEEEeeeec-cCCceEEEEEECCCceeeee-cCCCCCCCccceeEEecCeEEEEEec
Q 048294 196 YFESFKSSHYHMPWYHDCVNLDGGCYWLLELR-SNGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGLYKECISLLVLK 273 (375)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~~ 273 (375)
.+...+.+... .. .+.++|.+|.+.... ......+..||+.+.+|..+ ++|..... ......+|+|.++...
T Consensus 95 ~~~~~p~~r~~---~~-~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 95 SVAPMNVRRGL---AG-ATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREG--AGLVVASGVIYCLGGY 168 (301)
T ss_dssp EECCCSSCCBS---CE-EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBS--CEEEEETTEEEEECCB
T ss_pred ECCCCCCCccc---ee-EEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCccc--ceEEEECCEEEEECCC
Confidence 99765543221 22 778899999987422 11245799999999999987 44543321 2244679999888764
Q ss_pred CC-CcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEEEE-ecc--c
Q 048294 274 TI-EFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNFGL-NSL--H 341 (375)
Q Consensus 274 ~~-~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v~~-~~~--~ 341 (375)
.. ...-++|+++- ..|++.-.++.. .....++.-++.|++.-. ...+..||+++++|+++.- +.. .
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATK--RSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcc--cccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 32 22346777775 899987544322 222223333566655432 2569999999999999862 211 2
Q ss_pred eEEEEeecCcccCCC
Q 048294 342 FQVFNYTETLIPIKG 356 (375)
Q Consensus 342 ~~~~~y~~SLv~l~~ 356 (375)
..++.+-..|.-+.+
T Consensus 247 ~~~~~~~~~i~v~GG 261 (301)
T 2vpj_A 247 VGATVLRGRLYAIAG 261 (301)
T ss_dssp CEEEEETTEEEEECC
T ss_pred eeEEEECCEEEEEcC
Confidence 344555555555554
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.74 E-value=2.4e-06 Score=77.38 Aligned_cols=213 Identities=10% Similarity=-0.007 Sum_probs=131.1
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYF 197 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~ 197 (375)
..+.++||.|++|..+++.+... ...+ ....+ . +++.+..... .....+++|+..+++|+.+
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r-----~~~~--~~~~~----~-~lyv~GG~~~------~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKR-----RDAA--CVFWD----N-VVYILGGSQL------FPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCC-----BSCE--EEEET----T-EEEEECCBSS------SBCCEEEEEETTTTEEEEE
T ss_pred ceEEEecCCCCCEecCCCCCccc-----ceeE--EEEEC----C-EEEEEeCCCC------CCcceEEEEeCCCCeEEEC
Confidence 45999999999999998776521 1111 11122 1 4555543221 1246899999999999998
Q ss_pred cccCCcccccCCCCcceEeCccEEEeeeec--cCCceEEEEEECCCceeeee-cCCCCCCCccceeEEecCeEEEEEecC
Q 048294 198 ESFKSSHYHMPWYHDCVNLDGGCYWLLELR--SNGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGLYKECISLLVLKT 274 (375)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~~~ 274 (375)
...+.+... .. .+.++|.+|.+.... ......+..||+.+.+|+.+ ++|.... ...+...+|+|.++....
T Consensus 86 ~~~p~~r~~---~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 86 LGPPTPRDS---LA-ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC--SHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp ECCSSCCBS---CE-EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB--SCEEEEETTEEEEECCEE
T ss_pred CCCCccccc---ee-EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc--eeEEEEECCEEEEECCCC
Confidence 765533221 22 678899999987432 12245789999999999988 3444332 123446799998887642
Q ss_pred CC-c----EEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEEE-Eecc
Q 048294 275 IE-F----CFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNFG-LNSL 340 (375)
Q Consensus 275 ~~-~----~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v~-~~~~ 340 (375)
.. . .-++|+++- ..|++.-.++.. ......+.-++.|++.-. ...+..||+++++|+.+. ++..
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATETWTELCPMIEA--RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCcccccceEEEeCCCCCeEEECCCccch--hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 11 1 456777776 899987644322 222223333566655421 256899999999999985 2211
Q ss_pred --ceEEEEeecCcccCCC
Q 048294 341 --HFQVFNYTETLIPIKG 356 (375)
Q Consensus 341 --~~~~~~y~~SLv~l~~ 356 (375)
...++.+-..|.-+.+
T Consensus 238 r~~~~~~~~~~~i~v~GG 255 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAG 255 (306)
T ss_dssp BSCCEEEEETTEEEEEEC
T ss_pred ccceeEEEECCEEEEEeC
Confidence 2344445455555544
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.71 E-value=1.8e-06 Score=80.09 Aligned_cols=238 Identities=13% Similarity=0.033 Sum_probs=134.1
Q ss_pred EeeeecceEEEeeC--CCeEEEEcccc--cceeccCCCC-ccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCC
Q 048294 103 AGGPYDGIFCILGN--DNRLTLWNPAN--KEYRHVPKCR-IIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSD 177 (375)
Q Consensus 103 ~~~s~nGLl~~~~~--~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 177 (375)
..+..+|.|.+..+ ...++++||.+ ++|..+++.+ ... ...+ ...++ =+++.+..........
T Consensus 14 ~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R-----~~~~--~~~~~-----~~lyv~GG~~~~~~~~ 81 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPR-----DQAT--SAFID-----GNLYVFGGIGKNSEGL 81 (357)
T ss_dssp EEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCC-----BSCE--EEEET-----TEEEEECCEEECTTSC
T ss_pred EEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcC-----ccce--EEEEC-----CEEEEEcCCCCCCCcc
Confidence 34444776666542 34599999984 8999998866 311 1111 11122 1455554331100000
Q ss_pred CCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeecc-----------------------------
Q 048294 178 LYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRS----------------------------- 228 (375)
Q Consensus 178 ~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~----------------------------- 228 (375)
......+++|+..+++|+.+...+ +... .... ++.++|.+|.+.....
T Consensus 82 ~~~~~~v~~yd~~~~~W~~~~~~~-p~~r-~~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 82 TQVFNDVHKYNPKTNSWVKLMSHA-PMGM-AGHV-TFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp EEECCCEEEEETTTTEEEECSCCC-SSCC-SSEE-EEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ceeeccEEEEeCCCCcEEECCCCC-Cccc-ccce-EEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 112457999999999999988654 1111 1112 5679999999883210
Q ss_pred ------CCceEEEEEECCCceeeee-cCCCCCCCccceeEEecCeEEEEEecCC--CcEEEEEEEc---C-ceeeEEEEE
Q 048294 229 ------NGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGLYKECISLLVLKTI--EFCFEIWTMK---D-KEWTKKLTV 295 (375)
Q Consensus 229 ------~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~~~~--~~~~~iW~l~---~-~~W~~~~~i 295 (375)
.....+..||+.+.+|+.+ ++|...... ..+...+++|.++..... ...-++|.++ + ..|+++..+
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBS-CEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCccc-ccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 0125899999999999988 455433221 234467899888866321 1234677765 2 889987655
Q ss_pred CCCCCccccEEEeecCcEEEEecC-----------------------CeEEEEeCCCCcEEEEEE-ecc--ceEEEEeec
Q 048294 296 GPFEGMFHPLGFWKTGGFFAENQS-----------------------NQMILYDPRTEEMKNFGL-NSL--HFQVFNYTE 349 (375)
Q Consensus 296 ~~~~~~~~~~~~~~~~~ll~~~~~-----------------------~~~~~yd~~~~~~~~v~~-~~~--~~~~~~y~~ 349 (375)
+.........++.-++.|++.-.. ..+..||+++++|+++.- +.. ...++.+-.
T Consensus 238 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 238 SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNN 317 (357)
T ss_dssp STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETT
T ss_pred CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCC
Confidence 433222233334445666554320 247899999999999862 211 233444545
Q ss_pred CcccCCC
Q 048294 350 TLIPIKG 356 (375)
Q Consensus 350 SLv~l~~ 356 (375)
.|.-+.+
T Consensus 318 ~i~v~GG 324 (357)
T 2uvk_A 318 SLLIIGG 324 (357)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 5555544
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.69 E-value=5.3e-06 Score=74.95 Aligned_cols=213 Identities=10% Similarity=0.071 Sum_probs=129.9
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceeec
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYFE 198 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~~ 198 (375)
.+.++||.+++|..+++.+... ...+.+. .+ =+++.+...... .....+++|+..+++|+.+.
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~--~~-----~~lyv~GG~~~~-----~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRR-----CRAGMVY--MA-----GLVFAVGGFNGS-----LRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCC-----BSCEEEE--ET-----TEEEEESCBCSS-----SBCCCEEEEETTTTEEEEEC
T ss_pred cEEEEcCcCCcEeEcccCCccc-----ccceEEE--EC-----CEEEEEeCcCCC-----ccccceEEECCCCCceeeCC
Confidence 4899999999999998765421 1111111 11 245555432221 12457899999999999998
Q ss_pred ccCCcccccCCCCcceEeCccEEEeeeec-cCCceEEEEEECCCceeeeec-CCCCCCCccceeEEecCeEEEEEecCCC
Q 048294 199 SFKSSHYHMPWYHDCVNLDGGCYWLLELR-SNGHKVVLSFDLGDEVYEEIQ-GPCLPQSVYVVMGLYKECISLLVLKTIE 276 (375)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~~~~~~il~fDl~~e~~~~i~-lP~~~~~~~~~l~~~~g~L~l~~~~~~~ 276 (375)
..+.+... .. .+.++|.+|-+.... ......+..||+.+.+|+.++ +|.... .......+|+|.++......
T Consensus 94 ~~p~~r~~---~~-~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 94 NMRDRRST---LG-AAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS--SVGVGVVGGLLYAVGGYDVA 167 (302)
T ss_dssp CCSSCCBS---CE-EEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB--SCEEEEETTEEEEECCEETT
T ss_pred CCCccccc---eE-EEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc--CceEEEECCEEEEEeCCCCC
Confidence 65543221 22 778899999987432 122357899999999999883 443322 12344679999888764322
Q ss_pred ---cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEEEEecc---ce
Q 048294 277 ---FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNFGLNSL---HF 342 (375)
Q Consensus 277 ---~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v~~~~~---~~ 342 (375)
..-++|+.+- ..|++.-.++.. ......+.-++.|++.-. ...+..||+++++|+.+.-... ..
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIAEMSTR--RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEECCCSSC--CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CCccccEEEEEeCCCCcEEECCCCccc--cccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC
Confidence 1335777776 899988544332 222222333566655522 2469999999999999862111 23
Q ss_pred EEEEeecCcccCCC
Q 048294 343 QVFNYTETLIPIKG 356 (375)
Q Consensus 343 ~~~~y~~SLv~l~~ 356 (375)
.++.+-..|.-+.+
T Consensus 246 ~~~~~~~~i~v~GG 259 (302)
T 2xn4_A 246 GVCAVNGLLYVVGG 259 (302)
T ss_dssp EEEEETTEEEEECC
T ss_pred eEEEECCEEEEECC
Confidence 44455555555544
No 13
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.65 E-value=2e-06 Score=78.13 Aligned_cols=218 Identities=12% Similarity=0.039 Sum_probs=129.6
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYF 197 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~ 197 (375)
..+.++||.|++|..+++.+... ....... .+ =+++.+....... ........+++|+..+++|+.+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r-----~~~~~~~--~~-----~~lyv~GG~~~~~-~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPR-----SGLAGCV--VG-----GLLYAVGGRNNSP-DGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCC-----BSCEEEE--ET-----TEEEEECCEEEET-TEEEECCCEEEEETTTTEEEEC
T ss_pred ceEEEEcCCCCeEeECCCCCccc-----ccceEEE--EC-----CEEEEECCCcCCC-CCCeecceEEEECCCCCeEeEC
Confidence 34899999999999998766521 1111111 11 1455553321000 0001234789999999999999
Q ss_pred cccCCcccccCCCCcceEeCccEEEeeeecc-CCceEEEEEECCCceeeee-cCCCCCCCccceeEEecCeEEEEEecCC
Q 048294 198 ESFKSSHYHMPWYHDCVNLDGGCYWLLELRS-NGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGLYKECISLLVLKTI 275 (375)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~~~~ 275 (375)
...+.+... .. .+.++|.+|.+..... .....+..||+.+.+|..+ ++|..... ......+++|.++.....
T Consensus 106 ~~~p~~r~~---~~-~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 106 APMSVPRNR---IG-VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG--VGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp CCCSSCCBT---CE-EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEECCBCS
T ss_pred CCCCcCccc---cE-EEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc--eEEEEECCEEEEEeCCCC
Confidence 865433221 22 6788999999873211 1234689999999999988 44443321 224467999988876432
Q ss_pred C-cEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEEE-Eecc--ceE
Q 048294 276 E-FCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNFG-LNSL--HFQ 343 (375)
Q Consensus 276 ~-~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v~-~~~~--~~~ 343 (375)
. ..-++|+++- ..|++.-.++... ....++.-++.|++.-. ...+..||+++++|+++. ++.. ...
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIR--SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG 257 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCC--BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCcc--ccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence 2 2345677765 8999875443321 22222233566655432 256999999999999986 2211 234
Q ss_pred EEEeecCcccCCC
Q 048294 344 VFNYTETLIPIKG 356 (375)
Q Consensus 344 ~~~y~~SLv~l~~ 356 (375)
++.+-..|.-+.+
T Consensus 258 ~~~~~~~i~v~GG 270 (308)
T 1zgk_A 258 ITVHQGRIYVLGG 270 (308)
T ss_dssp EEEETTEEEEECC
T ss_pred EEEECCEEEEEcC
Confidence 4455555555554
No 14
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.65 E-value=5.3e-06 Score=75.54 Aligned_cols=200 Identities=10% Similarity=0.048 Sum_probs=119.8
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCC-CCCCCCCceEEEEEcCCCCcee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEK-NSDLYDFSQTAVYNLSTNSWRY 196 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~-~~~~~~~~~~~vyss~~~~Wr~ 196 (375)
..+.++||.|++|.. ++.+...++ .. .+.... +=+++.+....... .........+.+|+..+++|+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r-----~~-~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPK-----NH-VSLVTK----ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCS-----SE-EEEECT----TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCc-----cc-eEEEEE----CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 349999999999986 333221111 11 111111 12455554432110 0001112348899999999999
Q ss_pred ecccCCcccccCCCCcceEeCccEEEeeeec----cCCceEEEEEECCCceeeee-cCCCCCCCccceeEEecCeEEEEE
Q 048294 197 FESFKSSHYHMPWYHDCVNLDGGCYWLLELR----SNGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGLYKECISLLV 271 (375)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~ 271 (375)
+...+.+... .. .+.++|.+|.+.... ......+..||+.+.+|+.+ ++|..... ......+|+|.++.
T Consensus 82 ~~~~p~~r~~---~~-~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~--~~~~~~~~~iyv~G 155 (315)
T 4asc_A 82 MPPLPSPRCL---FG-LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG--HTVLSHMDLVYVIG 155 (315)
T ss_dssp CCCBSSCEES---CE-EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS--CEEEEETTEEEEEC
T ss_pred CCCCCcchhc---ee-EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc--eeEEEECCEEEEEe
Confidence 8765543321 22 788899999988432 22345689999999999987 44544321 23446899998887
Q ss_pred ecC--CCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEEE
Q 048294 272 LKT--IEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 272 ~~~--~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v~ 336 (375)
... ....-++|+++- ..|++.-.++.. .....++.-++.+++.-. ...+..||+++++|+.+.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTA--RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSC--CBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEEC
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCc--hhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECC
Confidence 752 223346777776 899987544322 222223333566655422 136899999999999986
No 15
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.59 E-value=1.4e-05 Score=76.15 Aligned_cols=47 Identities=26% Similarity=0.318 Sum_probs=43.0
Q ss_pred cCCCchHHHHHHHHccCCccccceeeeccccchhhcCChHHHHHHhh
Q 048294 4 STGDFYEDAVRAILLKQPVKSLLRFKCVCKSWYALFEDSMFIREHLK 50 (375)
Q Consensus 4 ~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~ 50 (375)
....||+|++.+||+.|++++|.++.+|||+|+.++.++.+.+....
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~ 64 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCK 64 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHT
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhee
Confidence 35689999999999999999999999999999999999988887654
No 16
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.53 E-value=4.3e-05 Score=72.95 Aligned_cols=44 Identities=9% Similarity=0.168 Sum_probs=39.6
Q ss_pred CCchHHHHHHHHccCCccccceeeeccccchhhcCC-hHHHHHHh
Q 048294 6 GDFYEDAVRAILLKQPVKSLLRFKCVCKSWYALFED-SMFIREHL 49 (375)
Q Consensus 6 ~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~-p~F~~~~~ 49 (375)
..||+||+.+||+.||+++|+++..|||+|+.++.+ +...+...
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 469999999999999999999999999999999998 77666554
No 17
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.48 E-value=1.2e-05 Score=73.33 Aligned_cols=230 Identities=12% Similarity=0.112 Sum_probs=130.7
Q ss_pred cceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCC-CCCCCceEEE
Q 048294 108 DGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNS-DLYDFSQTAV 186 (375)
Q Consensus 108 nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~-~~~~~~~~~v 186 (375)
++.|++-.+.. ..++||.|++|...|.+. ..|+ . . .+.... +=+|+.+......... .......+++
T Consensus 15 ~~~i~~~GG~~-~~~yd~~~~~W~~~~~~~-~~~r---~--~-~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~~~~ 82 (318)
T 2woz_A 15 KDLILLVNDTA-AVAYDPMENECYLTALAE-QIPR---N--H-SSIVTQ----QNQVYVVGGLYVDEENKDQPLQSYFFQ 82 (318)
T ss_dssp EEEEEEECSSE-EEEEETTTTEEEEEEECT-TSCS---S--E-EEEECS----SSCEEEEESSCC-------CCCBEEEE
T ss_pred cchhhhccccc-eEEECCCCCceecccCCc-cCCc---c--c-eEEEEE----CCEEEEECCcccCccccCCCccccEEE
Confidence 34444444443 899999999999844321 1111 1 1 111111 1234444331110000 0011234899
Q ss_pred EEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeec---cCCceEEEEEECCCceeeee-cCCCCCCCccceeEE
Q 048294 187 YNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELR---SNGHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGL 262 (375)
Q Consensus 187 yss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~ 262 (375)
|+..+++|+.+...+.+.. ... .+.++|.+|.+.... ......+..||+.+.+|+.+ ++|..... .....
T Consensus 83 ~d~~~~~W~~~~~~p~~r~---~~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~ 156 (318)
T 2woz_A 83 LDNVSSEWVGLPPLPSARC---LFG-LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG--HNVIS 156 (318)
T ss_dssp EETTTTEEEECSCBSSCBC---SCE-EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES--CEEEE
T ss_pred EeCCCCcEEECCCCCcccc---ccc-eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc--cEEEE
Confidence 9999999999876554332 122 778899999988532 12245799999999999988 44544321 22345
Q ss_pred ecCeEEEEEecC--CCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec------CCeEEEEeCCCCcE
Q 048294 263 YKECISLLVLKT--IEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEM 332 (375)
Q Consensus 263 ~~g~L~l~~~~~--~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~ 332 (375)
.+|+|.++.... ....-++|+++- ..|++.-.++... ....++.-++.|++.-. ...+..||+++++|
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 799998887642 122346777776 8999875443221 22222333566655422 14578999999999
Q ss_pred EEEE-Eecc--ceEEEEeecCcccCCCC
Q 048294 333 KNFG-LNSL--HFQVFNYTETLIPIKGD 357 (375)
Q Consensus 333 ~~v~-~~~~--~~~~~~y~~SLv~l~~~ 357 (375)
+.+. ++.. ...++.+-..|.-+.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 262 (318)
T 2woz_A 235 EVMTEFPQERSSISLVSLAGSLYAIGGF 262 (318)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred EECCCCCCcccceEEEEECCEEEEECCe
Confidence 9986 2221 23445555555555543
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.46 E-value=2.1e-05 Score=72.76 Aligned_cols=218 Identities=10% Similarity=0.049 Sum_probs=122.9
Q ss_pred EeeeecceEEEeeCC-----------CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEe
Q 048294 103 AGGPYDGIFCILGND-----------NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLW 171 (375)
Q Consensus 103 ~~~s~nGLl~~~~~~-----------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~ 171 (375)
..+..+|-|.+..+. ..+.++||.|++|..+++.+ ..++ ...+ ...++ =|++.+....
T Consensus 60 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r---~~~~--~~~~~-----~~iyv~GG~~ 128 (357)
T 2uvk_A 60 TSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGM---AGHV--TFVHN-----GKAYVTGGVN 128 (357)
T ss_dssp EEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCC---SSEE--EEEET-----TEEEEEECCC
T ss_pred eEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-Cccc---ccce--EEEEC-----CEEEEEeCcC
Confidence 445557766553221 35899999999999999866 1111 1111 11122 1566655322
Q ss_pred cCCC-----------------------------CCCCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEE
Q 048294 172 DEKN-----------------------------SDLYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYW 222 (375)
Q Consensus 172 ~~~~-----------------------------~~~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lyw 222 (375)
.... ........+++|+..+++|+.+...+.+... ... .+.++|.+|.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~--~~~-~~~~~~~iyv 205 (357)
T 2uvk_A 129 QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTA--GAA-VVNKGDKTWL 205 (357)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCB--SCE-EEEETTEEEE
T ss_pred CCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcc--ccc-EEEECCEEEE
Confidence 1100 0001235899999999999999755432211 123 7888999999
Q ss_pred eeeeccC--CceEEEEEEC--CCceeeee-cCCCCCCCccceeEEecCeEEEEEecCC------------------CcEE
Q 048294 223 LLELRSN--GHKVVLSFDL--GDEVYEEI-QGPCLPQSVYVVMGLYKECISLLVLKTI------------------EFCF 279 (375)
Q Consensus 223 l~~~~~~--~~~~il~fDl--~~e~~~~i-~lP~~~~~~~~~l~~~~g~L~l~~~~~~------------------~~~~ 279 (375)
+...... ....+..||+ .+.+|+.+ ++|.........+...+|+|.++..... ...-
T Consensus 206 ~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~ 285 (357)
T 2uvk_A 206 INGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSY 285 (357)
T ss_dssp ECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEE
T ss_pred EeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceecccccccee
Confidence 8732111 1345777877 88999987 3343322212235578999988876321 1124
Q ss_pred EEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec-------CCeEEEEeCCCCcEEEEE
Q 048294 280 EIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ-------SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 280 ~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~-------~~~~~~yd~~~~~~~~v~ 336 (375)
++|+.+- ..|+++-.++... ....++.-++.|++.-. ...+..++++++++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r--~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGR--AYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSCC--BSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCCc--ccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5666665 8999987655432 22333444666655432 135788999999988764
No 19
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.45 E-value=1.3e-05 Score=76.10 Aligned_cols=45 Identities=27% Similarity=0.431 Sum_probs=40.1
Q ss_pred CCchHH----HHHHHHccCCccccceeeeccccchhhcCChHHHHHHhh
Q 048294 6 GDFYED----AVRAILLKQPVKSLLRFKCVCKSWYALFEDSMFIREHLK 50 (375)
Q Consensus 6 ~~LP~D----ll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~ 50 (375)
..||+| |+.+||+.|++++|.++.+|||+|+.++.++.+-+....
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 469999 999999999999999999999999999998877666543
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.43 E-value=1.4e-05 Score=81.12 Aligned_cols=214 Identities=14% Similarity=0.160 Sum_probs=122.5
Q ss_pred ecceEEEeeC-----CCeEEEEcccccceeccC-CCCc-cCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCC
Q 048294 107 YDGIFCILGN-----DNRLTLWNPANKEYRHVP-KCRI-IFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLY 179 (375)
Q Consensus 107 ~nGLl~~~~~-----~~~~~V~NP~T~~~~~LP-~~~~-~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 179 (375)
.+|.|.+..+ .+.++++||.|++|..++ +.+. ..|. .+...+...+..+ =+++.+...... ..
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~hs~~~~~~~-----~~lyv~GG~~~~----~~ 465 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPV-ARMCHTFTTISRN-----NQLLLIGGRKAP----HQ 465 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCC-CCBSCEEEEETTT-----TEEEEECCBSST----TC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCc-cccceEEEEEccC-----CEEEEEcCCCCC----CC
Confidence 4665555432 135899999999999998 5221 0110 1111111111001 145555433221 11
Q ss_pred CCceEEEEEcCCCCceeecccCCcccccCCCCcceEe-CccEEEeeeeccCCceEEEEEECCCceeeeec----CCCCCC
Q 048294 180 DFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL-DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQ----GPCLPQ 254 (375)
Q Consensus 180 ~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~----lP~~~~ 254 (375)
....+++|+..+++|+.+...+.+... .. ++.+ +|.+|.+...... . .+..||+.+.+|..+. +|....
T Consensus 466 ~~~dv~~yd~~t~~W~~~~~~p~~R~~---h~-~~~~~~~~iyv~GG~~~~-~-~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 466 GLSDNWIFDMKTREWSMIKSLSHTRFR---HS-ACSLPDGNVLILGGVTEG-P-AMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp BCCCCEEEETTTTEEEECCCCSBCCBS---CE-EEECTTSCEEEECCBCSS-C-SEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred ccccEEEEeCCCCcEEECCCCCCCccc---ce-EEEEcCCEEEEECCCCCC-C-CEEEEECCCCceEEccCCCCCCCccc
Confidence 234689999999999999765533221 12 5554 9999998842211 2 7999999999999886 343332
Q ss_pred CccceeEEec---CeEEEEEecCC---CcEEEEEEEc--Cce------eeEEEEECCCCCccccEEEeecCcEEEEec--
Q 048294 255 SVYVVMGLYK---ECISLLVLKTI---EFCFEIWTMK--DKE------WTKKLTVGPFEGMFHPLGFWKTGGFFAENQ-- 318 (375)
Q Consensus 255 ~~~~~l~~~~---g~L~l~~~~~~---~~~~~iW~l~--~~~------W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~-- 318 (375)
. .. ...++ |+|.++..... ...-++|+++ ... |.++...++.........+.+++.|++.-.
T Consensus 540 ~-~~-a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 540 V-SA-GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp B-SC-EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred c-ee-EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 2 11 12334 88988876421 1223455555 455 887766432222223333444467766532
Q ss_pred -------CCeEEEEeCCCCcEEEEEEe
Q 048294 319 -------SNQMILYDPRTEEMKNFGLN 338 (375)
Q Consensus 319 -------~~~~~~yd~~~~~~~~v~~~ 338 (375)
...+..||+++++|+.+.+.
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCCC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeecc
Confidence 24699999999999976653
No 21
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.86 E-value=3e-06 Score=75.06 Aligned_cols=50 Identities=16% Similarity=0.137 Sum_probs=46.1
Q ss_pred cCCCchHHHHHHHHccCCccccceeeeccccchhhcCChHHHHHHhhccc
Q 048294 4 STGDFYEDAVRAILLKQPVKSLLRFKCVCKSWYALFEDSMFIREHLKNEE 53 (375)
Q Consensus 4 ~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~~~~ 53 (375)
+...||+||+..||+.|++++|+|+.+|||+||.++.|+...+.++.+..
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 45679999999999999999999999999999999999999998887754
No 22
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.0018 Score=65.12 Aligned_cols=197 Identities=14% Similarity=0.074 Sum_probs=108.1
Q ss_pred EEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCC-CCCCCceEEEEEcCCCCceeec
Q 048294 120 LTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNS-DLYDFSQTAVYNLSTNSWRYFE 198 (375)
Q Consensus 120 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~-~~~~~~~~~vyss~~~~Wr~~~ 198 (375)
+...+|.+++|..+++.+... .. .++. +. +=|++.+......... .......+.+|+..+++|+.+.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~-------~~-~av~--~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~ 235 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP-------AA-AAIE--PT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 235 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC-------SE-EEEE--TT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE
T ss_pred cccCCCCCCeeeeeccCCCCc-------ee-EEEE--ec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc
Confidence 334578888888877654411 11 2221 11 2256666543321100 0112236899999999999887
Q ss_pred ccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeec-CCCCCCCccceeEEe-cCeEEEEEecCC-
Q 048294 199 SFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQ-GPCLPQSVYVVMGLY-KECISLLVLKTI- 275 (375)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~-lP~~~~~~~~~l~~~-~g~L~l~~~~~~- 275 (375)
..+.+........ ++..+|.+|-.... ....+..||+.+.+|..+. +|.... ......+ +|++.++.....
T Consensus 236 ~~~~~~~~~~~~~-~~~~~g~lyv~GG~---~~~~v~~yd~~t~~W~~~~~~~~~R~--~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 236 VTVTKHDMFCPGI-SMDGNGQIVVTGGN---DAKKTSLYDSSSDSWIPGPDMQVARG--YQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp EEECSCCCSSCEE-EECTTSCEEEECSS---STTCEEEEEGGGTEEEECCCCSSCCS--SCEEEECTTSCEEEECCCCCS
T ss_pred ccCCCCCCccccc-cCCCCCCEEEeCCC---CCCceEEecCcCCceeECCCCCcccc--ccceEEecCCeEEEEeCcccC
Confidence 5543221111111 33468999998732 2236899999999999873 333322 1223456 999998877321
Q ss_pred ---CcEEEEEEEcCceeeEEEEEC--C-CCC----c----cccEEE-eecCcEEEEecCCeEEEEeCCCCcEEE
Q 048294 276 ---EFCFEIWTMKDKEWTKKLTVG--P-FEG----M----FHPLGF-WKTGGFFAENQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 276 ---~~~~~iW~l~~~~W~~~~~i~--~-~~~----~----~~~~~~-~~~~~ll~~~~~~~~~~yd~~~~~~~~ 334 (375)
...+++|-.+...|++.-... + ... . .....+ +.+|.++.......+..||+++++|..
T Consensus 310 ~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 310 GVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp SSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred CcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 133455544448898862211 1 100 0 111122 234555444345678999999998764
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.41 E-value=0.0016 Score=66.00 Aligned_cols=168 Identities=8% Similarity=-0.051 Sum_probs=103.1
Q ss_pred CceEEEEEcCCCCceeec-cc-----CCcccccCCCCcceEe--CccEEEeeeeccC--CceEEEEEECCCceeeee-cC
Q 048294 181 FSQTAVYNLSTNSWRYFE-SF-----KSSHYHMPWYHDCVNL--DGGCYWLLELRSN--GHKVVLSFDLGDEVYEEI-QG 249 (375)
Q Consensus 181 ~~~~~vyss~~~~Wr~~~-~~-----~~~~~~~~~~~~~v~~--~G~lywl~~~~~~--~~~~il~fDl~~e~~~~i-~l 249 (375)
...+.+|+..+++|+.+. .. +.+.. ... .+.+ +|.+|.+...... ....+..||+.+.+|+.+ ++
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~---~hs-~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARM---CHT-FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCB---SCE-EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCcccc---ceE-EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC
Confidence 456899999999999987 32 21111 122 6777 9999998843221 234689999999999988 44
Q ss_pred CCCCCCccceeEEe-cCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEEC---CCCCccccEEE-eec-CcEEEEec---
Q 048294 250 PCLPQSVYVVMGLY-KECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVG---PFEGMFHPLGF-WKT-GGFFAENQ--- 318 (375)
Q Consensus 250 P~~~~~~~~~l~~~-~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~---~~~~~~~~~~~-~~~-~~ll~~~~--- 318 (375)
|..... .....+ +|+|.++....... ++|+.+- ..|++....+ ... ......+ ..+ +.+++.-.
T Consensus 487 p~~R~~--h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r-~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 487 SHTRFR--HSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNS-LVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp SBCCBS--CEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSC-CBSCEEEEETTTTEEEEECCBCT
T ss_pred CCCccc--ceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcc-cceeEEEEeCCCCEEEEECCcCC
Confidence 443321 223343 99999888754333 7888876 8999876422 111 1122122 222 45655422
Q ss_pred -----CCeEEEEeCCCCc------EEEEEE-ecc---ceEEEEee-cCcccCCCC
Q 048294 319 -----SNQMILYDPRTEE------MKNFGL-NSL---HFQVFNYT-ETLIPIKGD 357 (375)
Q Consensus 319 -----~~~~~~yd~~~~~------~~~v~~-~~~---~~~~~~y~-~SLv~l~~~ 357 (375)
...+..||+++++ |+.+.- ... ...++.+- ..|.-+++.
T Consensus 562 ~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 562 DQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp TSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCB
T ss_pred CCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCc
Confidence 2469999999999 787753 111 23455555 566665553
No 24
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.41 E-value=2.5e-05 Score=71.58 Aligned_cols=42 Identities=26% Similarity=0.469 Sum_probs=38.1
Q ss_pred ccCCCchHHHHHHHHccCCccccceeeeccccchhhcCChHH
Q 048294 3 ISTGDFYEDAVRAILLKQPVKSLLRFKCVCKSWYALFEDSMF 44 (375)
Q Consensus 3 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~p~F 44 (375)
.+..+||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 356789999999999999999999999999999999877653
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.35 E-value=0.002 Score=64.77 Aligned_cols=193 Identities=11% Similarity=0.051 Sum_probs=106.4
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceeec
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYFE 198 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~~ 198 (375)
.+.++||.|++|..++..+.... ....+ ..+..| =+++.+.... ...+++|+..+++|+...
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~---~~~~~-~~~~~~-----g~lyv~GG~~---------~~~v~~yd~~t~~W~~~~ 281 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD---MFCPG-ISMDGN-----GQIVVTGGND---------AKKTSLYDSSSDSWIPGP 281 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC---CSSCE-EEECTT-----SCEEEECSSS---------TTCEEEEEGGGTEEEECC
T ss_pred EEEEEeCCCCcEEeCcccCCCCC---Ccccc-ccCCCC-----CCEEEeCCCC---------CCceEEecCcCCceeECC
Confidence 58899999999999886654210 01111 122112 2444443211 127999999999999987
Q ss_pred ccCCcccccCCCCcceEe-CccEEEeeeecc--CCceEEEEEECCCceeeeec------CCCCCCCccceeEEecCeEEE
Q 048294 199 SFKSSHYHMPWYHDCVNL-DGGCYWLLELRS--NGHKVVLSFDLGDEVYEEIQ------GPCLPQSVYVVMGLYKECISL 269 (375)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~--~~~~~il~fDl~~e~~~~i~------lP~~~~~~~~~l~~~~g~L~l 269 (375)
..+.+... .. .+.+ +|.+|-+..... .....+-.||+.+.+|..++ +|.... ..+...++++.+
T Consensus 282 ~~~~~R~~---~s-~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv 354 (656)
T 1k3i_A 282 DMQVARGY---QS-SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK---QGLYRSDNHAWL 354 (656)
T ss_dssp CCSSCCSS---CE-EEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT---TGGGTTTCSCCE
T ss_pred CCCccccc---cc-eEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc---cceeecCCceEE
Confidence 55432211 12 5666 999999884211 12356889999999999873 222211 111124555555
Q ss_pred EEecC-------CCcEEEEEEEcCceeeEEEEECCC------CCccccEEEe--ecCcEEEEecC---------C---eE
Q 048294 270 LVLKT-------IEFCFEIWTMKDKEWTKKLTVGPF------EGMFHPLGFW--KTGGFFAENQS---------N---QM 322 (375)
Q Consensus 270 ~~~~~-------~~~~~~iW~l~~~~W~~~~~i~~~------~~~~~~~~~~--~~~~ll~~~~~---------~---~~ 322 (375)
+...+ ....++.|-.+...|......... ........+. .+++|++.-.. . .+
T Consensus 355 ~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v 434 (656)
T 1k3i_A 355 FGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHII 434 (656)
T ss_dssp EECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEE
T ss_pred EECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEE
Confidence 54321 234455555555666654322211 0111111111 25666655321 1 67
Q ss_pred EEEeCCCCcEEEEE
Q 048294 323 ILYDPRTEEMKNFG 336 (375)
Q Consensus 323 ~~yd~~~~~~~~v~ 336 (375)
..||+++++|.++.
T Consensus 435 ~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 435 TLGEPGTSPNTVFA 448 (656)
T ss_dssp ECCSTTSCCEEEEC
T ss_pred EcCCCCCCCeeEEc
Confidence 89999999999874
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.66 E-value=0.00025 Score=70.14 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=29.5
Q ss_pred cCCCchHHHHHHHHccCC-ccccceeeeccccchhh
Q 048294 4 STGDFYEDAVRAILLKQP-VKSLLRFKCVCKSWYAL 38 (375)
Q Consensus 4 ~~~~LP~Dll~eIL~rLP-~ksl~r~r~VcK~W~~l 38 (375)
-...||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 456899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.22 E-value=0.00067 Score=67.03 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=31.8
Q ss_pred CCCchHHHHHHHHccC-Cccccceeeeccccchhh
Q 048294 5 TGDFYEDAVRAILLKQ-PVKSLLRFKCVCKSWYAL 38 (375)
Q Consensus 5 ~~~LP~Dll~eIL~rL-P~ksl~r~r~VcK~W~~l 38 (375)
...||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 4579999999999999 899999999999999987
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.51 E-value=1.1 Score=38.79 Aligned_cols=190 Identities=8% Similarity=-0.077 Sum_probs=95.3
Q ss_pred eecceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
..+|.+.+.. ..+.++++|| +++......+.. .... .++..|+... +.. ... . .-.+
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~-------~~~~-~~i~~~~~g~---l~v-~~~-~--------~~~i 164 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK-------GSYP-SFITLGSDNA---LWF-TEN-Q--------NNAI 164 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSST-------TCCE-EEEEECTTSC---EEE-EET-T--------TTEE
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCC-------CCCC-ceEEEcCCCC---EEE-EeC-C--------CCEE
Confidence 3467776665 3456999999 776665432211 0122 5666665432 221 111 1 2356
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEE
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGL 262 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~ 262 (375)
.+|+. ++..+....... . .... ++.+ +|.+|+.. .....|..+|. +.++..+.+|............
T Consensus 165 ~~~~~-~g~~~~~~~~~~-~---~~~~-~i~~~~~g~l~v~~----~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTP-A---SGPV-GITKGNDDALWFVE----IIGNKIGRITT-SGEITEFKIPTPNARPHAITAG 233 (299)
T ss_dssp EEECT-TCCEEEEECSST-T---CCEE-EEEECTTSSEEEEE----TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC
T ss_pred EEEcC-CCcEEEeeCCCC-C---Ccce-eEEECCCCCEEEEc----cCCceEEEECC-CCcEEEEECCCCCCCceeEEEC
Confidence 67777 666654321110 0 0011 3333 57876554 34568999999 7777777666432211111123
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~ 333 (375)
-+|.|.+... ....+.+|-.+ .. ...+.+.........+.+ ++|.+++....+.++.||+++++++
T Consensus 234 ~~g~l~v~~~--~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 234 AGIDLWFTEW--GANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp STTCEEEEET--TTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC-----
T ss_pred CCCCEEEecc--CCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcccCC
Confidence 4677665543 23445555432 22 112222211112233445 7788888766789999999988764
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.29 E-value=4.2 Score=36.15 Aligned_cols=138 Identities=9% Similarity=0.121 Sum_probs=73.4
Q ss_pred eEEEEEcCCCCceeecccCCcccccCCCCcceEeC----ccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCcc
Q 048294 183 QTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLD----GGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVY 257 (375)
Q Consensus 183 ~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~----G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~ 257 (375)
.+.+++..++.|.......... . .-. ++.++ |.+.... .....|..+|+.+... ..+.+...... .
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~-~--~v~-~~~~~~~~~~~~l~~~----~~d~~i~v~d~~~~~~~~~~~~~~~~~~-v 150 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHS-A--SVN-SVQWAPHEYGPLLLVA----SSDGKVSVVEFKENGTTSPIIIDAHAIG-V 150 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS-S--CEE-EEEECCGGGCSEEEEE----ETTSEEEEEECCTTSCCCEEEEECCTTC-E
T ss_pred EEEEEEcCCCceeEeeeecCCC-c--ceE-EEEeCCCCCCCEEEEe----cCCCcEEEEecCCCCceeeEEecCCCCc-e
Confidence 6889999988876655332110 0 001 22222 3333333 2355777788876532 11111111100 0
Q ss_pred ceeEEe--------------cCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeec---CcEEEE-e
Q 048294 258 VVMGLY--------------KECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKT---GGFFAE-N 317 (375)
Q Consensus 258 ~~l~~~--------------~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~ll~~-~ 317 (375)
..+... ++.+.+.+. .+..+.||-+.. ..|.....+........-+.+.++ +.+++. .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 111111 466665555 467899999986 667777666543322334455666 666554 4
Q ss_pred cCCeEEEEeCCCCc
Q 048294 318 QSNQMILYDPRTEE 331 (375)
Q Consensus 318 ~~~~~~~yd~~~~~ 331 (375)
.++.+..||++++.
T Consensus 229 ~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 229 QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TTSCEEEEEESSTT
T ss_pred CCCEEEEEeCCCCC
Confidence 47789999988763
No 30
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.81 E-value=8.8 Score=38.64 Aligned_cols=66 Identities=12% Similarity=0.198 Sum_probs=42.3
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeec---CcEEEEe-cCCeEEEEeCCCCc
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKT---GGFFAEN-QSNQMILYDPRTEE 331 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~ll~~~-~~~~~~~yd~~~~~ 331 (375)
+|.+.+.+. .+..+.||-+.. ..+.....+........-+.+.++ +.+++.. .++.+..||+++++
T Consensus 169 d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 169 ESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 455555555 467799999987 566666666543222234455666 6665544 47789999988763
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.44 E-value=6.2 Score=33.82 Aligned_cols=189 Identities=12% Similarity=0.129 Sum_probs=95.4
Q ss_pred ecceEEEeeC--CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 107 YDGIFCILGN--DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 107 ~nGLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
.+|-+.+... +..+.++|+..+....+...... .. .++.+|+... ++. ... ..-.+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~--------~~-~~i~~~~~g~---l~v-~~~---------~~~~i 144 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQ--------HP-RGVTVDNKGR---IIV-VEC---------KVMRV 144 (286)
T ss_dssp TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCS--------CE-EEEEECTTSC---EEE-EET---------TTTEE
T ss_pred CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCC--------Cc-eEEEEeCCCC---EEE-EEC---------CCCEE
Confidence 5777666663 55689999665544444332211 12 5666676432 222 111 12366
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEE
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGL 262 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~ 262 (375)
.+|+.....-+...... .. .... ++.+ +|.+|... .....|..||...+....+..+............
T Consensus 145 ~~~~~~g~~~~~~~~~~--~~--~~p~-~i~~~~~g~l~v~~----~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 145 IIFDQNGNVLHKFGCSK--HL--EFPN-GVVVNDKQEIFISD----NRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp EEECTTSCEEEEEECTT--TC--SSEE-EEEECSSSEEEEEE----GGGTEEEEEETTCCEEEEESCTTTSCSEEEEEEC
T ss_pred EEEcCCCCEEEEeCCCC--cc--CCcE-EEEECCCCCEEEEE----CCCCEEEEEcCCCCEEEEEccCCccCCCcEEEEC
Confidence 67775543333332110 00 0111 4444 47866544 2456899999977666655443211111111113
Q ss_pred ecCeEEEEEecCCCc-EEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCC
Q 048294 263 YKECISLLVLKTIEF-CFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRT 329 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~-~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~ 329 (375)
-+|.|.+... ... .+.+|-.+. .-..............-+++.++|.+++...++.+..|+...
T Consensus 216 ~~G~l~v~~~--~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 216 SNGEILIADN--HNNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp TTCCEEEEEC--SSSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCCEEEEeC--CCCEEEEEECCCC-CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 4777776654 233 777776433 222222222211112335566788888776677888888754
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.15 E-value=7.8 Score=34.41 Aligned_cols=198 Identities=13% Similarity=0.048 Sum_probs=103.3
Q ss_pred cceEEEeeC-----CCeEEEEcccccceec-cCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCC
Q 048294 108 DGIFCILGN-----DNRLTLWNPANKEYRH-VPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDF 181 (375)
Q Consensus 108 nGLl~~~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (375)
+|++.+-.+ ++.+.++||.|++... ++......+- .... .++.++. . ++..... . .
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~l---g~~~-~~i~~~~---~-~lyv~~~--~--------~ 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKL---GDVA-QSMVIRD---G-IGWIVVN--N--------S 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCC---BSCE-EEEEEET---T-EEEEEEG--G--------G
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCccc---Cccc-eEEEEEC---C-EEEEEEc--C--------C
Confidence 465555543 4679999999998753 2110000000 0011 2333332 2 2222221 1 2
Q ss_pred ceEEEEEcCCCCc-eeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCC--cc
Q 048294 182 SQTAVYNLSTNSW-RYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQS--VY 257 (375)
Q Consensus 182 ~~~~vyss~~~~W-r~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~--~~ 257 (375)
-.+.+++..+++- +.++....+.. - .+.-+|.+|... .....|..+|+.+.+.. .++++..... ..
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~p~~-----i-~~~~~g~lyv~~----~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p 133 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTSPRY-----I-HFLSDEKAYVTQ----IWDYRIFIINPKTYEITGYIECPDMDMESGST 133 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSSEEE-----E-EEEETTEEEEEE----BSCSEEEEEETTTTEEEEEEECTTCCTTTCBC
T ss_pred CEEEEEECcccEEEEEcCCCCCCcE-----E-EEeCCCeEEEEE----CCCCeEEEEECCCCeEEEEEEcCCccccCCCc
Confidence 3788899888764 33322111111 0 222588887765 13568999999998764 5666552110 11
Q ss_pred ceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecC-----------CeEEEEe
Q 048294 258 VVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQS-----------NQMILYD 326 (375)
Q Consensus 258 ~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~-----------~~~~~yd 326 (375)
..+..-+++|.+.... ....+.++-++.....+...+.. ...-+.+.++|.+++.... +.++.+|
T Consensus 134 ~~i~~~~~~lyv~~~~-~~~~v~viD~~t~~~~~~i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id 209 (328)
T 3dsm_A 134 EQMVQYGKYVYVNCWS-YQNRILKIDTETDKVVDELTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRID 209 (328)
T ss_dssp CCEEEETTEEEEEECT-TCCEEEEEETTTTEEEEEEECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEE
T ss_pred ceEEEECCEEEEEcCC-CCCEEEEEECCCCeEEEEEEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEE
Confidence 1233457777766431 24455555444443333333322 1233455677888776543 5799999
Q ss_pred CCCCcEEE-EEE
Q 048294 327 PRTEEMKN-FGL 337 (375)
Q Consensus 327 ~~~~~~~~-v~~ 337 (375)
++++++.+ +.+
T Consensus 210 ~~t~~v~~~~~~ 221 (328)
T 3dsm_A 210 AETFTVEKQFKF 221 (328)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCeEEEEEec
Confidence 99988774 444
No 33
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.47 E-value=8 Score=33.39 Aligned_cols=197 Identities=10% Similarity=0.036 Sum_probs=104.0
Q ss_pred eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEc
Q 048294 110 IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNL 189 (375)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (375)
|+......+.++++||.++ ...+..+.. .. .++.+|+... ++. ... . ...+.+|+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~---------~~-~~l~~~~dg~---l~v-~~~-~--------~~~i~~~d~ 97 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSH---------HQ-NGHCLNKQGH---LIA-CSH-G--------LRRLERQRE 97 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCS---------SE-EEEEECTTCC---EEE-EET-T--------TTEEEEECS
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCC---------Cc-ceeeECCCCc---EEE-Eec-C--------CCeEEEEcC
Confidence 4444445567999999998 555433211 12 6677776432 222 211 1 236788888
Q ss_pred CCCCceeecccCCccccc-CCCCcceEeCccEEEeeee-------------ccCCceEEEEEECCCceeeeecCCCCCCC
Q 048294 190 STNSWRYFESFKSSHYHM-PWYHDCVNLDGGCYWLLEL-------------RSNGHKVVLSFDLGDEVYEEIQGPCLPQS 255 (375)
Q Consensus 190 ~~~~Wr~~~~~~~~~~~~-~~~~~~v~~~G~lywl~~~-------------~~~~~~~il~fDl~~e~~~~i~lP~~~~~ 255 (375)
.++..+............ ...- .+--+|.+|..... .......|..+|.. .++..+.-. ...
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i-~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~ 173 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDV-CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVK 173 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCE-EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSS
T ss_pred CCCcEEEEeeccCCCCCCCCCCE-EECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCC
Confidence 788776553221111110 1111 23336877664210 00123589999987 555444211 111
Q ss_pred ccceeE-EecCeEEEEEecCCCcEEEEEEEcC-cee-eEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcE
Q 048294 256 VYVVMG-LYKECISLLVLKTIEFCFEIWTMKD-KEW-TKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEM 332 (375)
Q Consensus 256 ~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-~~W-~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~ 332 (375)
. .-+. .-+|++. +... ....+.+|-++. ... .....+........-+++..+|.+++.. ++.+..||++++.+
T Consensus 174 ~-~gi~~s~dg~~l-v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~ 249 (296)
T 3e5z_A 174 P-NGLAFLPSGNLL-VSDT-GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDEL 249 (296)
T ss_dssp E-EEEEECTTSCEE-EEET-TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEE
T ss_pred C-ccEEECCCCCEE-EEeC-CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEE
Confidence 0 1122 2367655 4432 456788888874 554 3333332112223446667788888777 78899999998777
Q ss_pred EEEEEe
Q 048294 333 KNFGLN 338 (375)
Q Consensus 333 ~~v~~~ 338 (375)
+.+..+
T Consensus 250 ~~~~~~ 255 (296)
T 3e5z_A 250 GRVLTP 255 (296)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 776543
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.27 E-value=11 Score=34.58 Aligned_cols=197 Identities=8% Similarity=0.023 Sum_probs=93.0
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
|.+++|-+.. +++++|||..|++...+-..... .... ..+.|.+.. .|- +... . .-.+.
T Consensus 114 S~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~------~~~V-~sv~fspdg-~~l--asgs--~--------Dg~v~ 172 (420)
T 4gga_A 114 SSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQP------GEYI-SSVAWIKEG-NYL--AVGT--S--------SAEVQ 172 (420)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEEEECCST------TCCE-EEEEECTTS-SEE--EEEE--T--------TSCEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCC------CCcE-EEEEECCCC-CEE--EEEE--C--------CCeEE
Confidence 4566666555 45699999999987765433221 1112 555665532 332 2222 1 23688
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecC
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKE 265 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g 265 (375)
+++..++.-...-. .+. ..-. ++..+|.+-... .....+..+|..........+..............+|
T Consensus 173 iWd~~~~~~~~~~~---~h~--~~v~-~~s~~~~~l~sg----s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 173 LWDVQQQKRLRNMT---SHS--ARVG-SLSWNSYILSSG----SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEETTTTEEEEEEC---CCS--SCEE-EEEEETTEEEEE----ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEEcCCCcEEEEEe---CCC--CceE-EEeeCCCEEEEE----eCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 88888764211110 010 0011 444455433322 2345666677665443322222211110011112355
Q ss_pred eEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeec-CcEEEEe---cCCeEEEEeCCCCcEEEE
Q 048294 266 CISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKT-GGFFAEN---QSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 266 ~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~-~~ll~~~---~~~~~~~yd~~~~~~~~v 335 (375)
+..+... .+..+.||-+.. ..+............-..+.+.+. +.++... .++.+..||+++++....
T Consensus 243 ~~l~s~~--~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 243 RHLASGG--NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp SEEEEEE--TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred Ceeeeee--ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 5544444 467788998775 222222222211111122233333 4454432 357788999988876543
No 35
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=87.84 E-value=11 Score=31.63 Aligned_cols=185 Identities=8% Similarity=0.015 Sum_probs=92.1
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
..+|-+.+....+.++++|+.++....++..... .. .++.+|+... +. +.... .-.+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~--------~p-~~i~~~~~g~---l~-v~~~~---------~~~i~ 132 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLN--------YP-EGLAVDTQGA---VY-VADRG---------NNRVV 132 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSCS--------SE-EEEEECTTCC---EE-EEEGG---------GTEEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcC--------CC-cceEECCCCC---EE-EEECC---------CCEEE
Confidence 3467666655455699999988876655432211 12 6677776432 22 22211 12566
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-E
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-L 262 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~ 262 (375)
+|+.++......... . . .... ++.+ +|.+|+.. .....|..||..+.......... ... ...+. .
T Consensus 133 ~~~~~~~~~~~~~~~--~--~-~~p~-~i~~~~~g~l~v~~----~~~~~i~~~~~~~~~~~~~~~~~-~~~-p~~i~~d 200 (270)
T 1rwi_B 133 KLAAGSKTQTVLPFT--G--L-NDPD-GVAVDNSGNVYVTD----TDNNRVVKLEAESNNQVVLPFTD-ITA-PWGIAVD 200 (270)
T ss_dssp EECTTCCSCEECCCC--S--C-CSCC-CEEECTTCCEEEEE----GGGTEEEEECTTTCCEEECCCSS-CCS-EEEEEEC
T ss_pred EEECCCceeEeeccc--c--C-CCce-eEEEeCCCCEEEEE----CCCCEEEEEecCCCceEeecccC-CCC-ceEEEEC
Confidence 665554433322111 0 0 1112 4444 58877655 23568999999876654332211 111 11122 2
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCcccc--EEEeecCcEEEEec-CCeEEEEeCCCCc
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHP--LGFWKTGGFFAENQ-SNQMILYDPRTEE 331 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~~~~ll~~~~-~~~~~~yd~~~~~ 331 (375)
-+|.|.+... ....+.+|-.+. .... + .......| +++.++|.+++... ++.+..|++..++
T Consensus 201 ~~g~l~v~~~--~~~~v~~~~~~~~~~~~----~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 201 EAGTVYVTEH--NTNQVVKLLAGSTTSTV----L-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp TTCCEEEEET--TTSCEEEECTTCSCCEE----C-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCCCEEEEEC--CCCcEEEEcCCCCccee----e-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 3566665543 234455554443 1111 1 11122334 44456778766654 6788899887654
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.12 E-value=15 Score=32.30 Aligned_cols=74 Identities=9% Similarity=0.055 Sum_probs=46.9
Q ss_pred EecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEEe-c-CCeEEEE--eCCCCcEEEEE
Q 048294 262 LYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN-Q-SNQMILY--DPRTEEMKNFG 336 (375)
Q Consensus 262 ~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~-~-~~~~~~y--d~~~~~~~~v~ 336 (375)
.-+|+..++... ....+.+|.++. ..+.....+........-+++.++|+.++.. . ++.+..| |.++++++.+.
T Consensus 248 spdG~~l~v~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 248 SHDGHFLYVSNR-GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp CTTSCEEEEEEE-TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCCEEEEEeC-CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 346774433332 467899999986 5555555554322223456777888865543 3 4677777 88889998876
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.72 E-value=18 Score=32.75 Aligned_cols=195 Identities=7% Similarity=0.008 Sum_probs=97.2
Q ss_pred eeeecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCce
Q 048294 104 GGPYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQ 183 (375)
Q Consensus 104 ~~s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (375)
++..++.++....++.+.|||..|++...+-.... .... ..+.+.+.. .+ ++... . .-.
T Consensus 99 ~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~-------~~~v-~~v~~s~~~-~~--l~~~~--~--------dg~ 157 (401)
T 4aez_A 99 LDWSNLNVVAVALERNVYVWNADSGSVSALAETDE-------STYV-ASVKWSHDG-SF--LSVGL--G--------NGL 157 (401)
T ss_dssp EEECTTSEEEEEETTEEEEEETTTCCEEEEEECCT-------TCCE-EEEEECTTS-SE--EEEEE--T--------TSC
T ss_pred EeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCC-------CCCE-EEEEECCCC-CE--EEEEC--C--------CCe
Confidence 34334444445556679999999998765443321 1112 555666632 32 22222 1 226
Q ss_pred EEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-E
Q 048294 184 TAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-L 262 (375)
Q Consensus 184 ~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~ 262 (375)
+.+|+..++.-...-.. +. ..-. .+..+|...... .....|..+|+....-....+...... ...+. .
T Consensus 158 i~iwd~~~~~~~~~~~~---~~--~~v~-~~~~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~ 226 (401)
T 4aez_A 158 VDIYDVESQTKLRTMAG---HQ--ARVG-CLSWNRHVLSSG----SRSGAIHHHDVRIANHQIGTLQGHSSE-VCGLAWR 226 (401)
T ss_dssp EEEEETTTCCEEEEECC---CS--SCEE-EEEEETTEEEEE----ETTSEEEEEETTSSSCEEEEEECCSSC-EEEEEEC
T ss_pred EEEEECcCCeEEEEecC---CC--CceE-EEEECCCEEEEE----cCCCCEEEEecccCcceeeEEcCCCCC-eeEEEEc
Confidence 88888887643221110 10 0011 444566544444 245678888987433221111111110 11121 2
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecC-cEEEEe---cCCeEEEEeCCCCcEEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTG-GFFAEN---QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~ll~~~---~~~~~~~yd~~~~~~~~ 334 (375)
-+|.+.+.+. .+..+.||-++.. .....+.........+.+.+++ .++... .++.+..||+++++...
T Consensus 227 ~~~~~l~s~~--~d~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 227 SDGLQLASGG--NDNVVQIWDARSS--IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN 298 (401)
T ss_dssp TTSSEEEEEE--TTSCEEEEETTCS--SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEe--CCCeEEEccCCCC--CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE
Confidence 2566555554 4678999988761 1122232222222344555554 455543 37889999998876543
No 38
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=86.08 E-value=15 Score=31.23 Aligned_cols=184 Identities=8% Similarity=-0.078 Sum_probs=92.0
Q ss_pred ecceEEEeeC-CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 107 YDGIFCILGN-DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 107 ~nGLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+|-+.+... .+.++++||. ++....+.+.. .... .++.+|+... + .+... . .-.+.
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-------~~~~-~~i~~d~~g~---l-~v~~~-~--------~~~i~ 170 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK-------GSYP-AFITLGSDNA---L-WFTEN-Q--------NNSIG 170 (300)
T ss_dssp STTCEEEEETTTTEEEEECTT-SCEEEEECSST-------TCCE-EEEEECTTSS---E-EEEET-T--------TTEEE
T ss_pred CCCCEEEEccCCCeEEEECCC-CCEEEccCCCC-------CCCc-eeEEECCCCC---E-EEEec-C--------CCeEE
Confidence 4676666653 4568889987 66554332211 0122 5666666432 2 22221 1 22566
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEe
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLY 263 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~ 263 (375)
+|+. ++......... .. .... ++.+ +|.+|+.. .....|..||. +.++..+.+|............-
T Consensus 171 ~~~~-~g~~~~~~~~~-~~---~~~~-~i~~d~~g~l~v~~----~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPT-NA---AAPV-GITSGNDGALWFVE----IMGNKIGRITT-TGEISEYDIPTPNARPHAITAGK 239 (300)
T ss_dssp EECT-TCCEEEEECSS-TT---CCEE-EEEECTTSSEEEEE----TTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECS
T ss_pred EECC-CCcEEEeeCCC-CC---CCcc-eEEECCCCCEEEEc----cCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECC
Confidence 6766 55555433211 00 1111 4444 58777655 34568999999 66676666664322111112233
Q ss_pred cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCC
Q 048294 264 KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPR 328 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~ 328 (375)
+|.|.+... ....+..+-.+ .... .+.+........-+.+.++|.+++.... .++.||++
T Consensus 240 ~g~l~v~~~--~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p~ 299 (300)
T 2qc5_A 240 NSEIWFTEW--GANQIGRITND-NTIQ-EYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNLN 299 (300)
T ss_dssp TTCEEEEET--TTTEEEEECTT-SCEE-EEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEEC
T ss_pred CCCEEEecc--CCCeEEEECCC-CcEE-EEECCccCCccceeEeCCCCCEEEEccC-ceEEeCCC
Confidence 677665543 23444444332 2222 2222211112233445567888877664 89999875
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=84.64 E-value=12 Score=33.01 Aligned_cols=105 Identities=10% Similarity=-0.043 Sum_probs=58.9
Q ss_pred CceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEe
Q 048294 230 GHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFW 308 (375)
Q Consensus 230 ~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (375)
....+..+|..+.++..+......... ..+. .-+|+|.++........+.+|-++...+.....+........-+++.
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p-~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNP-TYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCC-CCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCc-ceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 345688888888887765332221111 1122 33788554443223567889988766655554432211122345667
Q ss_pred ecCcEEEE-e-cCCeEEEEeCC-CCcEEEE
Q 048294 309 KTGGFFAE-N-QSNQMILYDPR-TEEMKNF 335 (375)
Q Consensus 309 ~~~~ll~~-~-~~~~~~~yd~~-~~~~~~v 335 (375)
++|+.++. . .++.+..||++ +++.+.+
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 88886554 3 35778899985 4455544
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=84.62 E-value=18 Score=30.75 Aligned_cols=195 Identities=10% Similarity=0.057 Sum_probs=97.1
Q ss_pred EeeeecceEEEeeC-CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCC
Q 048294 103 AGGPYDGIFCILGN-DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDF 181 (375)
Q Consensus 103 ~~~s~nGLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (375)
+....+|-+.+... .+.++++||. ++...+..+.. .... .++.+|+... +. +.... .
T Consensus 62 i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~-------~~~~-~~i~~~~~g~---l~-v~~~~---------~ 119 (299)
T 2z2n_A 62 LTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNP-------DSAP-YGITEGPNGD---IW-FTEMN---------G 119 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-------TCCE-EEEEECTTSC---EE-EEETT---------T
T ss_pred EEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCc-------CCCc-eeeEECCCCC---EE-EEecC---------C
Confidence 33335777766654 4568999986 44443332211 0122 5666665431 22 11111 2
Q ss_pred ceEEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccce
Q 048294 182 SQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVV 259 (375)
Q Consensus 182 ~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~ 259 (375)
-.+.+|+. ++..+....... . .... ++.+ +|.+|... .....|..+|. +.++..+.+|.........
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~-~---~~~~-~i~~~~~g~l~v~~----~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 188 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNK-G---SYPS-FITLGSDNALWFTE----NQNNAIGRITE-SGDITEFKIPTPASGPVGI 188 (299)
T ss_dssp TEEEEECT-TCCEEEEECSST-T---CCEE-EEEECTTSCEEEEE----TTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred ceEEEECC-CCCEEEecCCCC-C---CCCc-eEEEcCCCCEEEEe----CCCCEEEEEcC-CCcEEEeeCCCCCCcceeE
Confidence 25566666 554443321110 0 0011 3333 57777654 24568999999 7777766665433211111
Q ss_pred eEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCcccc--EEEeecCcEEEEe-cCCeEEEEeCCCCcEEEEE
Q 048294 260 MGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHP--LGFWKTGGFFAEN-QSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 260 l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~~~ll~~~-~~~~~~~yd~~~~~~~~v~ 336 (375)
...-+|.|.+... ....+.+|-. +..... .... .....| +.+.++|.+++.. ..+.+..||+ +++++.+.
T Consensus 189 ~~~~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~ 261 (299)
T 2z2n_A 189 TKGNDDALWFVEI--IGNKIGRITT-SGEITE-FKIP--TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP 261 (299)
T ss_dssp EECTTSSEEEEET--TTTEEEEECT-TCCEEE-EECS--STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE
T ss_pred EECCCCCEEEEcc--CCceEEEECC-CCcEEE-EECC--CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEe
Confidence 1233577655543 2344555444 233221 2222 122233 4445678877776 4678999999 56666654
Q ss_pred E
Q 048294 337 L 337 (375)
Q Consensus 337 ~ 337 (375)
+
T Consensus 262 ~ 262 (299)
T 2z2n_A 262 I 262 (299)
T ss_dssp C
T ss_pred C
Confidence 4
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=82.90 E-value=24 Score=31.06 Aligned_cols=194 Identities=9% Similarity=-0.100 Sum_probs=98.5
Q ss_pred ecceEEEee-CCCeEEEEcccccce-eccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 107 YDGIFCILG-NDNRLTLWNPANKEY-RHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 107 ~nGLl~~~~-~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
.++.+.+.. .++.+.|+|+.|++. ..+|.... . .++.+++. . ++..... . .-.+
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~----------p-~~i~~~~~--g-~lyv~~~--~--------~~~v 107 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS----------P-RYIHFLSD--E-KAYVTQI--W--------DYRI 107 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS----------E-EEEEEEET--T-EEEEEEB--S--------CSEE
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC----------C-cEEEEeCC--C-eEEEEEC--C--------CCeE
Confidence 355555444 346799999999887 44642211 1 44444333 2 4433321 1 2377
Q ss_pred EEEEcCCCCce-eecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCccceeEE
Q 048294 185 AVYNLSTNSWR-YFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMGL 262 (375)
Q Consensus 185 ~vyss~~~~Wr-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~~ 262 (375)
.+++..+++-. .++........ ....+-+..+|.+|.... .....|..+|+.+.+.. .++...... .....
T Consensus 108 ~~iD~~t~~~~~~i~~g~~~~~~-~~p~~i~~~~~~lyv~~~---~~~~~v~viD~~t~~~~~~i~~g~~p~---~i~~~ 180 (328)
T 3dsm_A 108 FIINPKTYEITGYIECPDMDMES-GSTEQMVQYGKYVYVNCW---SYQNRILKIDTETDKVVDELTIGIQPT---SLVMD 180 (328)
T ss_dssp EEEETTTTEEEEEEECTTCCTTT-CBCCCEEEETTEEEEEEC---TTCCEEEEEETTTTEEEEEEECSSCBC---CCEEC
T ss_pred EEEECCCCeEEEEEEcCCccccC-CCcceEEEECCEEEEEcC---CCCCEEEEEECCCCeEEEEEEcCCCcc---ceEEc
Confidence 88888877532 22211100000 011113335667766541 12568999999987753 454432211 11113
Q ss_pred ecCeEEEEEecCC--------CcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEE
Q 048294 263 YKECISLLVLKTI--------EFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 263 ~~g~L~l~~~~~~--------~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~ 333 (375)
-+|++.+++.... ...+.++-.+..+-.+...++.. ....-+++.++++.++.... .++.+|++++++.
T Consensus 181 ~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 181 KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 4688776654310 13344333332343333333211 12344566667777666544 8999999987763
No 42
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.41 E-value=26 Score=31.00 Aligned_cols=116 Identities=15% Similarity=0.062 Sum_probs=65.7
Q ss_pred eCccEEEeeeeccCCceEEEEEECCCceeeeec----CCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcC--ce
Q 048294 216 LDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQ----GPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKD--KE 288 (375)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~----lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~--~~ 288 (375)
-+|..-++.. .....|..||+.+.++..+. .|..... ...+. .-+|+..++........+.||.++. ..
T Consensus 220 pdg~~l~v~~---~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~-~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 220 SDGKFAYLIN---EIGGTVIAFRYADGMLDEIQTVAADTVNAQG-SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp TTSSEEEEEE---TTTCEEEEEEEETTEEEEEEEEESCSSCCCC-EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred CCCCEEEEEc---CCCCeEEEEEecCCceEEeEEEecCCCCCCC-cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 3575333331 23567888888777664432 2222111 11222 3477755454432157899999973 56
Q ss_pred eeEEEEECCCCCccccEEEeecCcEEEEec--CCeEEE--EeCCCCcEEEEE
Q 048294 289 WTKKLTVGPFEGMFHPLGFWKTGGFFAENQ--SNQMIL--YDPRTEEMKNFG 336 (375)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~--~~~~~~--yd~~~~~~~~v~ 336 (375)
+.....+.. ....+-+.+.++|+.++... ++.+.. +|.++++++.+.
T Consensus 296 ~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 296 LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 666655554 22334566778888655433 456666 677888888764
No 43
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=82.17 E-value=21 Score=29.86 Aligned_cols=199 Identities=12% Similarity=-0.039 Sum_probs=95.1
Q ss_pred eecceEEEeeCCCeEEEEcccc-cceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILGNDNRLTLWNPAN-KEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
+-+|-.++...++.++++|..+ ++...+...... ... ..+.+.|.. . .++ +.....+ ....+
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~-~~~~~spdg-~-~l~-~~~~~~~------~~~~l 112 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-------ICN-NDHGISPDG-A-LYA-ISDKVEF------GKSAI 112 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC-------CBC-SCCEECTTS-S-EEE-EEECTTT------SSCEE
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc-------ccc-cceEECCCC-C-EEE-EEEeCCC------CcceE
Confidence 3455544444455699999999 877666533210 011 333444432 2 222 2221111 24566
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEeCcc-EEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-E
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGG-CYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-L 262 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~ 262 (375)
.+++..++.-+.+........ . ...-+|. +++... ......|..+|+.+.....+...... ...+. .
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~-----~-~~spdg~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~s 181 (297)
T 2ojh_A 113 YLLPSTGGTPRLMTKNLPSYW-----H-GWSPDGKSFTYCGI--RDQVFDIYSMDIDSGVETRLTHGEGR---NDGPDYS 181 (297)
T ss_dssp EEEETTCCCCEECCSSSSEEE-----E-EECTTSSEEEEEEE--ETTEEEEEEEETTTCCEEECCCSSSC---EEEEEEC
T ss_pred EEEECCCCceEEeecCCCccc-----e-EECCCCCEEEEEEC--CCCceEEEEEECCCCcceEcccCCCc---cccceEC
Confidence 667766665444432211000 0 1122444 333331 12345677788877665544221111 11111 2
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEE-ecC-----------CeEEEEeCC
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQS-----------NQMILYDPR 328 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~-----------~~~~~yd~~ 328 (375)
-+|+..++... ....+.||.++. ... ..+.........+.+.++|+.++. ..+ ..++.||++
T Consensus 182 ~dg~~l~~~~~-~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 182 PDGRWIYFNSS-RTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp TTSSEEEEEEC-TTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCCCEEEEEec-CCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 36664444432 345789999873 221 222221111223455677775443 322 459999999
Q ss_pred CCcEEEEE
Q 048294 329 TEEMKNFG 336 (375)
Q Consensus 329 ~~~~~~v~ 336 (375)
+++.+.+.
T Consensus 258 ~~~~~~~~ 265 (297)
T 2ojh_A 258 GGNVETLF 265 (297)
T ss_dssp SCSCEEEE
T ss_pred CCCceeee
Confidence 98877654
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.91 E-value=31 Score=31.60 Aligned_cols=57 Identities=7% Similarity=0.119 Sum_probs=31.3
Q ss_pred CcEEEEEEEcCceeeEEEEEC--CCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEE
Q 048294 276 EFCFEIWTMKDKEWTKKLTVG--PFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 276 ~~~~~iW~l~~~~W~~~~~i~--~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~ 334 (375)
...+.||-.....- +..+. ....+.....+.++|.+|....++.+.+||+++++.++
T Consensus 377 ~~~i~iwd~~~g~~--~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 377 LRTIDVFDGNSGKM--MCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCEEEECSSSCCE--EEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCEEEEEECCCCcE--EEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 34688887665221 22222 12223333456778888877678889999999887653
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=80.59 E-value=31 Score=31.59 Aligned_cols=195 Identities=11% Similarity=0.035 Sum_probs=89.7
Q ss_pred cc-eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEE
Q 048294 108 DG-IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAV 186 (375)
Q Consensus 108 nG-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (375)
++ +|.....++.+.|||..+++...+-.... + . .....+.|.|..+.+ ++.. .. .-.+.+
T Consensus 131 ~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H-~-~~V~~l~f~p~~~~~-l~s~---s~--------D~~v~i 191 (435)
T 4e54_B 131 HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----A-G-GSITGLKFNPLNTNQ-FYAS---SM--------EGTTRL 191 (435)
T ss_dssp CTTCEEEEETTSCEEEECSSCCSCCEEECCCS-----S-S-CCCCEEEECSSCTTE-EEEE---CS--------SSCEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceeEEEccC-----C-C-CCEEEEEEeCCCCCE-EEEE---eC--------CCEEEE
Confidence 44 55555566779999998886443222111 1 1 112566666654443 2211 11 226778
Q ss_pred EEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecC
Q 048294 187 YNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKE 265 (375)
Q Consensus 187 yss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g 265 (375)
++..++.-+.....-..... ...- ...-+|.+.... .....|..+|+..+....+..-.. ....+. .-++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~l~~g----~~dg~i~~wd~~~~~~~~~~~h~~---~v~~v~~~p~~ 262 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIW-FCSL-DVSASSRMVVTG----DNVGNVILLNMDGKELWNLRMHKK---KVTHVALNPCC 262 (435)
T ss_dssp EETTSCEEEEEECCSSCSCC-CCCE-EEETTTTEEEEE----CSSSBEEEEESSSCBCCCSBCCSS---CEEEEEECTTC
T ss_pred eeccCCceeEEeccCCCCcc-EEEE-EECCCCCEEEEE----eCCCcEeeeccCcceeEEEecccc---eEEeeeecCCC
Confidence 88877654443321110000 0000 122245444433 234567778887654333321110 011121 1134
Q ss_pred e-EEEEEecCCCcEEEEEEEcCceeeEEE--EECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEE
Q 048294 266 C-ISLLVLKTIEFCFEIWTMKDKEWTKKL--TVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMK 333 (375)
Q Consensus 266 ~-L~l~~~~~~~~~~~iW~l~~~~W~~~~--~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~ 333 (375)
. +.+.+. .+..+.||-+....-.... ..... ..-.-+++.++|..|+. ..++.+..||.++....
T Consensus 263 ~~~~~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 263 DWFLATAS--VDQTVKIWDLRQVRGKASFLYSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp SSEEEEEE--TTSBCCEEETTTCCSSSCCSBCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred ceEEEEec--CcceeeEEecccccccceEEEeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 3 333333 4677889977651100000 00011 00112234467776554 44788999999876543
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=80.54 E-value=29 Score=30.41 Aligned_cols=68 Identities=9% Similarity=-0.025 Sum_probs=42.5
Q ss_pred cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCC--CcEEEE
Q 048294 264 KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRT--EEMKNF 335 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~--~~~~~v 335 (375)
+|++.+... .+..+.+|-++... ....+........-+.+.+++.++....++.+..||+++ ++|..+
T Consensus 213 ~~~~l~~~~--~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 213 NGSRVAWVS--HDSTVCLADADKKM--AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp SSSEEEEEE--TTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEEC
T ss_pred CCCEEEEEe--CCCEEEEEECCCCc--eeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEe
Confidence 555544444 46789999987622 222222222222344566788887777788999999988 776654
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=80.44 E-value=31 Score=30.66 Aligned_cols=192 Identities=9% Similarity=0.007 Sum_probs=96.1
Q ss_pred eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEc
Q 048294 110 IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNL 189 (375)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss 189 (375)
++.....++.+.|||..+++....-..... . .....+.+.+..+.+ +.... . .-.+.+++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h------~-~~v~~~~~~~~~~~~--l~s~~--~--------d~~i~iwd~ 148 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGP------G-DAITGMKFNQFNTNQ--LFVSS--I--------RGATTLRDF 148 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCST------T-CBEEEEEEETTEEEE--EEEEE--T--------TTEEEEEET
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCc------C-CceeEEEeCCCCCCE--EEEEe--C--------CCEEEEEEC
Confidence 444444556699999988876544322110 1 112555555532222 22221 1 237788888
Q ss_pred CCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCe-E
Q 048294 190 STNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKEC-I 267 (375)
Q Consensus 190 ~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L 267 (375)
.++..+........... ...- ...-+|...... .....|..+|+..+....+...... ...+. .-+|+ +
T Consensus 149 ~~~~~~~~~~~~~~~~~-v~~~-~~~~~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~h~~~---v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYW-YCCV-DVSVSRQMLATG----DSTGRLLLLGLDGHEIFKEKLHKAK---VTHAEFNPRCDWL 219 (383)
T ss_dssp TSCEEEEEECCCCSSCC-EEEE-EEETTTTEEEEE----ETTSEEEEEETTSCEEEEEECSSSC---EEEEEECSSCTTE
T ss_pred CCCceEEEeccCCCCCC-eEEE-EECCCCCEEEEE----CCCCCEEEEECCCCEEEEeccCCCc---EEEEEECCCCCCE
Confidence 87655544422110000 0000 222244433333 2456788888866655555422211 11121 23455 5
Q ss_pred EEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEee-cCcEEEE-ecCCeEEEEeCCCCcE
Q 048294 268 SLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWK-TGGFFAE-NQSNQMILYDPRTEEM 332 (375)
Q Consensus 268 ~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~ll~~-~~~~~~~~yd~~~~~~ 332 (375)
.+.+. .+..+.||-+.. ..-.....+... ....-+.+.+ ++..++. ..++.+..||+++.+.
T Consensus 220 l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 220 MATSS--VDATVKLWDLRNIKDKNSYIAEMPHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp EEEEE--TTSEEEEEEGGGCCSTTCEEEEEECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred EEEEe--CCCEEEEEeCCCCCcccceEEEecCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 44444 467899999886 112223333322 2223345566 7776554 4478999999987654
No 48
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.42 E-value=32 Score=30.73 Aligned_cols=110 Identities=11% Similarity=0.034 Sum_probs=61.4
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCC------CCcc-ceeEEecCeEEEEEecCCCcEEEEEEE
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLP------QSVY-VVMGLYKECISLLVLKTIEFCFEIWTM 284 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~------~~~~-~~l~~~~g~L~l~~~~~~~~~~~iW~l 284 (375)
++..+|.+|... ....|.+||..+.+.. ..+++... .... ......+|.+.+... ...+..+-.
T Consensus 49 p~v~~~~v~~~~-----~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~ 120 (376)
T 3q7m_A 49 PALADNVVYAAD-----RAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNT 120 (376)
T ss_dssp CEEETTEEEEEC-----TTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEET
T ss_pred cEEECCEEEEEc-----CCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEEC
Confidence 888999999866 3568999999766543 23443221 1111 112345666655432 233333333
Q ss_pred cC--ceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEEE
Q 048294 285 KD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 285 ~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v 335 (375)
+. ..|.... .. .....|. ..++.+++...++.++.+|.++++..+-
T Consensus 121 ~tG~~~W~~~~--~~-~~~~~p~--~~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 121 SDGTVAWQTKV--AG-EALSRPV--VSDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp TTCCEEEEEEC--SS-CCCSCCE--EETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEeC--CC-ceEcCCE--EECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 33 5675432 21 1122332 2356667666678899999998876643
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.53 E-value=35 Score=30.11 Aligned_cols=69 Identities=7% Similarity=0.140 Sum_probs=42.2
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEE
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~ 334 (375)
+|++.+.+. .+..+.||-++. ..+.....+........-+.+.+++++++. ..++.+..||.+++++..
T Consensus 116 ~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 116 SGNLLATCS--RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp TSSEEEEEE--TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEE--CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 566655554 467899999987 555555544432222233455567765544 457778889888776543
No 50
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=78.39 E-value=30 Score=29.25 Aligned_cols=193 Identities=6% Similarity=-0.001 Sum_probs=97.7
Q ss_pred EeeeecceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCC
Q 048294 103 AGGPYDGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDF 181 (375)
Q Consensus 103 ~~~s~nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 181 (375)
+....+|-+.+.. ..+.+.++||. ++...++.+.. .... .++..|+... +. +.. .. .
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~-------~~~~-~~i~~~~~g~---l~-v~~-~~--------~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP-------DAKV-MCLIVSSLGD---IW-FTE-NG--------A 82 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-------TCCE-EEEEECTTSC---EE-EEE-TT--------T
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC-------CCcc-eeEEECCCCC---EE-EEe-cC--------C
Confidence 4444567666665 34669999998 76665443211 0112 5566665432 21 111 11 2
Q ss_pred ceEEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccce
Q 048294 182 SQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVV 259 (375)
Q Consensus 182 ~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~ 259 (375)
-.+.+|+.. +.++........ .... ++.+ +|.+|+.. .....|..+|.. .++..+.+|.........
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~----~~~~-~i~~~~~g~l~v~~----~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i 151 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPD----SGPY-GITEGLNGDIWFTQ----LNGDRIGKLTAD-GTIYEYDLPNKGSYPAFI 151 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTT----CCEE-EEEECSTTCEEEEE----TTTTEEEEECTT-SCEEEEECSSTTCCEEEE
T ss_pred CeEEEECCC-CCeEEecCCCCC----CCCc-cceECCCCCEEEEc----cCCCeEEEECCC-CCEEEccCCCCCCCceeE
Confidence 356677766 665544322110 0011 3433 57776654 235689999998 666666665432211111
Q ss_pred eEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCcccc--EEEeecCcEEEEec-CCeEEEEeCCCCcEEEE
Q 048294 260 MGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHP--LGFWKTGGFFAENQ-SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 260 l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~~~~ll~~~~-~~~~~~yd~~~~~~~~v 335 (375)
...-+|+|.+... .... |++++. ..... .... .....| +.+.++|.+++... .+.+..||+ ++++..+
T Consensus 152 ~~d~~g~l~v~~~--~~~~--i~~~~~~g~~~~-~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 152 TLGSDNALWFTEN--QNNS--IGRITNTGKLEE-YPLP--TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY 223 (300)
T ss_dssp EECTTSSEEEEET--TTTE--EEEECTTCCEEE-EECS--STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE
T ss_pred EECCCCCEEEEec--CCCe--EEEECCCCcEEE-eeCC--CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE
Confidence 1234677655443 2233 444443 33332 2221 122233 34455678877764 457999998 5666655
Q ss_pred E
Q 048294 336 G 336 (375)
Q Consensus 336 ~ 336 (375)
.
T Consensus 224 ~ 224 (300)
T 2qc5_A 224 D 224 (300)
T ss_dssp E
T ss_pred E
Confidence 3
No 51
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=78.30 E-value=30 Score=29.28 Aligned_cols=202 Identities=11% Similarity=0.111 Sum_probs=100.7
Q ss_pred eecceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
+.+|-+.+.. .++.+.++|+..+....++...... ...... .++.+++..+. ++.. .... ...+
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~---~~~~~p-~~i~~~~~~g~--l~v~-~~~~--------~~~i 102 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD---SQLLYP-NRVAVVRNSGD--IIVT-ERSP--------THQI 102 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST---TCBSSE-EEEEEETTTTE--EEEE-ECGG--------GCEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc---ccccCc-eEEEEEcCCCe--EEEE-cCCC--------CCEE
Confidence 3466666654 3456999999876666665432110 001122 56666433222 2222 1111 2366
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEE
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGL 262 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~ 262 (375)
.+|+.....-+....... .... ++.+ +|.+|... .....|..||...+....+..+............
T Consensus 103 ~~~d~~g~~~~~~~~~~~-----~~~~-~i~~~~~g~l~v~~----~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATIL-----QHPR-GVTVDNKGRIIVVE----CKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp EEECTTSCEEEEECTTTC-----SCEE-EEEECTTSCEEEEE----TTTTEEEEECTTSCEEEEEECTTTCSSEEEEEEC
T ss_pred EEECCCCcEEEEecCccC-----CCce-EEEEeCCCCEEEEE----CCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEEC
Confidence 777743332222221100 0011 3333 68776654 3456899999877666655443222111111113
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCcccc--EEEeecCcEEEEec-CC-eEEEEeCCCCcEEEEEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHP--LGFWKTGGFFAENQ-SN-QMILYDPRTEEMKNFGL 337 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~--~~~~~~~~ll~~~~-~~-~~~~yd~~~~~~~~v~~ 337 (375)
-+|++.+... ....+.+|-.+. .. ...+........| +++.++|.+++... ++ .+..||.+.+.++.+..
T Consensus 173 ~~g~l~v~~~--~~~~i~~~~~~g-~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 173 DKQEIFISDN--RAHCVKVFNYEG-QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp SSSEEEEEEG--GGTEEEEEETTC-CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEC--CCCEEEEEcCCC-CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 3677655443 345677776543 21 2223322112233 45566788877765 33 89999988777776654
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=78.04 E-value=24 Score=31.05 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=56.3
Q ss_pred CceEEEEEECCCceeeee-cCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEE
Q 048294 230 GHKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGF 307 (375)
Q Consensus 230 ~~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~ 307 (375)
....|..+|+.+.++..+ .++.... ....+. .-+|++.+.+. .+..+.+|-++...+.....+........-+.+
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 104 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCG--TDRNAYVWTLKGRTWKPTLVILRINRAARCVRW 104 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSS-CEEEEEEETTTTEEEEEE--TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCC-cccEEEEeCCCCEEEEEc--CCCeEEEEECCCCeeeeeEEeecCCCceeEEEE
Confidence 355777788887764333 2222111 111222 23566655554 467899999987666666554332222233455
Q ss_pred eecCcEEEE-ecCCeEEEEeCCCCc
Q 048294 308 WKTGGFFAE-NQSNQMILYDPRTEE 331 (375)
Q Consensus 308 ~~~~~ll~~-~~~~~~~~yd~~~~~ 331 (375)
.+++..++. ..++.+..||+++++
T Consensus 105 ~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 105 APNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp CTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CCCCCEEEEEeCCCEEEEEEecCCC
Confidence 567766554 456788888888765
No 53
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=76.72 E-value=40 Score=29.91 Aligned_cols=198 Identities=12% Similarity=0.022 Sum_probs=91.9
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
+-++.++....++.+.|||..|++........... + . .....+.|.+.. .+ + .... . .-.+.
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~---H-~-~~V~~v~~spdg-~~-l-~sgs--~--------d~~i~ 152 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETLIVSKFCKYE---H-D-DIVSTVSVLSSG-TQ-A-VSGS--K--------DICIK 152 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEEC---C-S-SCEEEEEECTTS-SE-E-EEEE--T--------TSCEE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCceeEeeccccC---C-C-CCEEEEEECCCC-CE-E-EEEe--C--------CCeEE
Confidence 33566666666778999999988754433221111 0 1 112455565543 22 2 2111 1 22678
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceE--eCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCccceeE-
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVN--LDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMG- 261 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~- 261 (375)
+++..++.=. .... .+.... . ++. -+|.-..++. .....|..+|+.+.+.. .+..+..... ...+.
T Consensus 153 iwd~~~~~~~--~~~~-~h~~~V--~-~~~~~~~~~~~l~s~---s~D~~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~ 222 (344)
T 4gqb_B 153 VWDLAQQVVL--SSYR-AHAAQV--T-CVAASPHKDSVFLSC---SEDNRILLWDTRCPKPASQIGCSAPGYL-PTSLAW 222 (344)
T ss_dssp EEETTTTEEE--EEEC-CCSSCE--E-EEEECSSCTTEEEEE---ETTSCEEEEETTSSSCEEECC----CCC-EEEEEE
T ss_pred EEECCCCcEE--EEEc-CcCCce--E-EEEecCCCCCceeee---ccccccccccccccceeeeeecceeecc-ceeeee
Confidence 8888775321 1110 010000 0 111 2232222221 13446777888876543 2322221111 11121
Q ss_pred -EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCc-EEE-EecCCeEEEEeCCCCcEEEE
Q 048294 262 -LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGG-FFA-ENQSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 262 -~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-ll~-~~~~~~~~~yd~~~~~~~~v 335 (375)
..++++.+... .+..+.||-++..+ .+..+......-.-+++.+++. +|. ...++.+..||.+++++.++
T Consensus 223 ~p~~~~~l~sg~--~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 223 HPQQSEVFVFGD--ENGTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CSSCTTEEEEEE--TTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred cCCCCcceEEec--cCCcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 12455544444 46789999776511 1122221111223345566664 444 34578899999999876543
No 54
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=76.38 E-value=42 Score=29.89 Aligned_cols=192 Identities=8% Similarity=-0.040 Sum_probs=95.5
Q ss_pred EeeeecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCc
Q 048294 103 AGGPYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFS 182 (375)
Q Consensus 103 ~~~s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 182 (375)
.....+|.|.+...++.++.+|+.|++.++--..... .... ... + +. +|+... . .-
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~------~~~~-p~~--~---~~-~v~v~~---~--------~g 153 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE------ALSR-PVV--S---DG-LVLIHT---S--------NG 153 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC------CCSC-CEE--E---TT-EEEEEC---T--------TS
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc------eEcC-CEE--E---CC-EEEEEc---C--------CC
Confidence 3455688888877777799999999986532111110 0000 011 0 11 222211 1 22
Q ss_pred eEEEEEcCCCC--ceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeee-ec--CCCCCC---
Q 048294 183 QTAVYNLSTNS--WRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQ--GPCLPQ--- 254 (375)
Q Consensus 183 ~~~vyss~~~~--Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~--lP~~~~--- 254 (375)
.+..|+..++. |+........ ....... ++..+|.+|.-. ....+.++|..+.+... .+ .|....
T Consensus 154 ~l~~~d~~tG~~~W~~~~~~~~~-~~~~~~~-~~~~~~~v~~g~-----~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 226 (376)
T 3q7m_A 154 QLQALNEADGAVKWTVNLDMPSL-SLRGESA-PTTAFGAAVVGG-----DNGRVSAVLMEQGQMIWQQRISQATGSTEID 226 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC------CCCCC-CEEETTEEEECC-----TTTEEEEEETTTCCEEEEEECCC--------
T ss_pred eEEEEECCCCcEEEEEeCCCCce-eecCCCC-cEEECCEEEEEc-----CCCEEEEEECCCCcEEEEEecccCCCCcccc
Confidence 67778877764 8765432211 1111233 677788877644 45689999998765432 22 222110
Q ss_pred ---CccceeEEecCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCC
Q 048294 255 ---SVYVVMGLYKECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRT 329 (375)
Q Consensus 255 ---~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~ 329 (375)
.........+|.+.+... ...+..+-.+. ..|.... . ....+ ...++.+++...++.++++|+++
T Consensus 227 ~~~~~~~~p~~~~~~v~~~~~---~g~l~~~d~~tG~~~w~~~~--~---~~~~~--~~~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 227 RLSDVDTTPVVVNGVVFALAY---NGNLTALDLRSGQIMWKREL--G---SVNDF--IVDGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp ---CCCCCCEEETTEEEEECT---TSCEEEEETTTCCEEEEECC--C---CEEEE--EEETTEEEEEETTCCEEEEETTT
T ss_pred cccccCCCcEEECCEEEEEec---CcEEEEEECCCCcEEeeccC--C---CCCCc--eEECCEEEEEcCCCeEEEEECCC
Confidence 000111123555544332 22333333332 3455321 1 11112 22456677776778999999999
Q ss_pred CcEEEE
Q 048294 330 EEMKNF 335 (375)
Q Consensus 330 ~~~~~v 335 (375)
++..+-
T Consensus 297 G~~~w~ 302 (376)
T 3q7m_A 297 GVTLWT 302 (376)
T ss_dssp CCEEEE
T ss_pred CcEEEe
Confidence 886653
No 55
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=76.05 E-value=56 Score=31.19 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=92.6
Q ss_pred ceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEE
Q 048294 109 GIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYN 188 (375)
Q Consensus 109 GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (375)
++++.....+...|+|..|++.+.|...+. ..+.++|.. ++ ++........ ...+.+++
T Consensus 123 ~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~------------~~~~~spDG-~~-la~~~~~~~~-------~~~i~~~d 181 (582)
T 3o4h_A 123 AVVFTGATEDRVALYALDGGGLRELARLPG------------FGFVSDIRG-DL-IAGLGFFGGG-------RVSLFTSN 181 (582)
T ss_dssp CEEEEEECSSCEEEEEEETTEEEEEEEESS------------CEEEEEEET-TE-EEEEEEEETT-------EEEEEEEE
T ss_pred eEEEEecCCCCceEEEccCCcEEEeecCCC------------ceEEECCCC-CE-EEEEEEcCCC-------CeEEEEEc
Confidence 466665554446799999998776653211 222333322 22 2222222211 23577888
Q ss_pred cCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcccee--------
Q 048294 189 LSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVM-------- 260 (375)
Q Consensus 189 s~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l-------- 260 (375)
..++.++.+........ .. ...-||...+.. .......|..+|+.+.+... +...........
T Consensus 182 ~~~g~~~~l~~~~~~~~----~~-~~SpDG~~l~~~--~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 182 LSSGGLRVFDSGEGSFS----SA-SISPGMKVTAGL--ETAREARLVTVDPRDGSVED--LELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp TTTCCCEEECCSSCEEE----EE-EECTTSCEEEEE--ECSSCEEEEEECTTTCCEEE--CCCSCSHHHHHCCSEEEEEE
T ss_pred CCCCCceEeecCCCccc----cc-eECCCCCEEEEc--cCCCeeEEEEEcCCCCcEEE--ccCCCcChhhhhhcccccee
Confidence 88888887653321110 01 222256544422 12234589999999887762 222211100001
Q ss_pred EEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEec----CCeEEEEeCCCCcEEEE
Q 048294 261 GLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ----SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 261 ~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~----~~~~~~yd~~~~~~~~v 335 (375)
-.-+|++.+... .+..+.||.+ . ...+ .+ .+....+.+. ++.+++... ...++.+|.++ +.+.+
T Consensus 253 ~spdg~~~~~~~--~~g~~~l~~~-g-~~~~----~~-~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 253 YLPDGRLAVVAR--REGRSAVFID-G-ERVE----AP-QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp ECTTSCEEEEEE--ETTEEEEEET-T-EEEC----CC-SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred EcCCCcEEEEEE--cCCcEEEEEE-C-Ceec----cC-CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 134676555444 4568999998 3 2111 11 1212233445 777765432 24588888776 44444
No 56
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=75.67 E-value=38 Score=29.12 Aligned_cols=198 Identities=8% Similarity=0.055 Sum_probs=97.1
Q ss_pred cceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEE
Q 048294 108 DGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAV 186 (375)
Q Consensus 108 nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (375)
+|-|.+.+ ..++++.++|.|++...+..+. .. .++.+++..+ ++. .. ...+.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~----------~~-~~i~~~~dG~---l~v-~~-----------~~~l~~ 77 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA----------PV-SSVALRQSGG---YVA-TI-----------GTKFCA 77 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS----------CE-EEEEEBTTSS---EEE-EE-----------TTEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC----------ce-EEEEECCCCC---EEE-EE-----------CCeEEE
Confidence 45444444 4567999999998765543221 11 4566666543 222 21 126788
Q ss_pred EEcCCCCceeecccCCcccccCCCCcceE--eCccEEEeeeecc-------CCceEEEEEECCCceeeeecCCCCCCCcc
Q 048294 187 YNLSTNSWRYFESFKSSHYHMPWYHDCVN--LDGGCYWLLELRS-------NGHKVVLSFDLGDEVYEEIQGPCLPQSVY 257 (375)
Q Consensus 187 yss~~~~Wr~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~-------~~~~~il~fDl~~e~~~~i~lP~~~~~~~ 257 (375)
|+..++.++.+......... .... .+. -+|.+|+-..... .....|..+|.... ...+. ..... .
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~-~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~~-p 151 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKN-NRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVDI-S 151 (297)
T ss_dssp EETTTTEEEEEEECCTTCSS-EEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEESB-E
T ss_pred EECCCCcEEEEEecCCCCCC-CCCC-CEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--ecccc-c
Confidence 89888887765432211100 0011 232 3688665442211 23467888887643 22221 00000 0
Q ss_pred ceeE-EecCeEEEEEecCCCcEEEEEEEc-C-ceeeEEEEE-CCCC--CccccEEEeecCcEEEEec-CCeEEEEeCCCC
Q 048294 258 VVMG-LYKECISLLVLKTIEFCFEIWTMK-D-KEWTKKLTV-GPFE--GMFHPLGFWKTGGFFAENQ-SNQMILYDPRTE 330 (375)
Q Consensus 258 ~~l~-~~~g~L~l~~~~~~~~~~~iW~l~-~-~~W~~~~~i-~~~~--~~~~~~~~~~~~~ll~~~~-~~~~~~yd~~~~ 330 (375)
.-+. .-+|+..++... ....+.+|-++ . ........+ .... ....-+++..+|.+++... .+.+..||++++
T Consensus 152 ngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp EEEEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cceEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 1121 225553333322 34556666654 2 333222111 1111 1223345556788877654 567999999965
Q ss_pred cE-EEEEEe
Q 048294 331 EM-KNFGLN 338 (375)
Q Consensus 331 ~~-~~v~~~ 338 (375)
++ ..+.++
T Consensus 231 ~~~~~i~~p 239 (297)
T 3g4e_A 231 KRLQTVKLP 239 (297)
T ss_dssp CEEEEEECS
T ss_pred eEEEEEECC
Confidence 54 456554
No 57
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=75.62 E-value=40 Score=29.28 Aligned_cols=29 Identities=14% Similarity=0.304 Sum_probs=20.0
Q ss_pred EEEeecCcEEEE-ecCCeEEEEeCCCCcEE
Q 048294 305 LGFWKTGGFFAE-NQSNQMILYDPRTEEMK 333 (375)
Q Consensus 305 ~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~ 333 (375)
+++.+++..++. ..++.+..||+++++..
T Consensus 279 ~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred EEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 445567765554 45788999999987544
No 58
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=74.19 E-value=42 Score=28.87 Aligned_cols=147 Identities=9% Similarity=0.050 Sum_probs=76.4
Q ss_pred eEEEEEcCC-CCceeec--ccCCcccccCCCCcceEeCcc-EEEeeeeccCCceEEEEEECCC--ceee---ee-cCCCC
Q 048294 183 QTAVYNLST-NSWRYFE--SFKSSHYHMPWYHDCVNLDGG-CYWLLELRSNGHKVVLSFDLGD--EVYE---EI-QGPCL 252 (375)
Q Consensus 183 ~~~vyss~~-~~Wr~~~--~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~--e~~~---~i-~lP~~ 252 (375)
.+.+|+..+ +..+... ............- ...-+|. +|... .....|..+|+.. .++. .+ .+|..
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pdg~~l~~~~----~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHM-VFHPNEQYAYCVN----ELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCCEEEE-EECTTSSEEEEEE----TTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred EEEEEEecCCCceeeecccccccCCCCCcceE-EECCCCCEEEEEe----CCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 688888887 6665332 1100000000000 1222565 44433 2455788888843 4432 22 24443
Q ss_pred CCCc-c-ceeE-EecCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEec--CCeEEEE
Q 048294 253 PQSV-Y-VVMG-LYKECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ--SNQMILY 325 (375)
Q Consensus 253 ~~~~-~-~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~--~~~~~~y 325 (375)
.... . ..+. .-+|+..++... ....+.+|-++. ..+.....+..... ..-+++.++|..++... ++.+..|
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred ccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEE
Confidence 2111 1 1122 235654444432 467899999985 45666665554322 34566777888655443 5677777
Q ss_pred --eCCCCcEEEEE
Q 048294 326 --DPRTEEMKNFG 336 (375)
Q Consensus 326 --d~~~~~~~~v~ 336 (375)
|.++++++.+.
T Consensus 305 ~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 305 EIVGEQGLLHEKG 317 (343)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEcCCCceeeEcc
Confidence 77788888765
No 59
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.70 E-value=41 Score=29.13 Aligned_cols=113 Identities=8% Similarity=0.010 Sum_probs=59.3
Q ss_pred eCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcC-ceeeEEE
Q 048294 216 LDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKD-KEWTKKL 293 (375)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~ 293 (375)
-+|.+||.. .....|..+|+.+.++..+..+.. .....+. .-+|+|.+.........-.|++++. ..... .
T Consensus 54 ~~g~l~~~~----~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~ 126 (333)
T 2dg1_A 54 RQGQLFLLD----VFEGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-D 126 (333)
T ss_dssp TTSCEEEEE----TTTCEEEEECTTTCCEEEEEECSS--SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-E
T ss_pred CCCCEEEEE----CCCCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-E
Confidence 368888876 245689999999888766532111 1111122 3467776655421111123444443 11111 1
Q ss_pred EEC-CCC-CccccEEEeecCcEEEEec-------CCeEEEEeCCCCcEEEE
Q 048294 294 TVG-PFE-GMFHPLGFWKTGGFFAENQ-------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 294 ~i~-~~~-~~~~~~~~~~~~~ll~~~~-------~~~~~~yd~~~~~~~~v 335 (375)
.+. ... ....-+.+.++|.+++... ...++.||+++++++.+
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 111 111 1122344556788877654 25799999988777655
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=73.48 E-value=44 Score=30.18 Aligned_cols=186 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceeec
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYFE 198 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~~ 198 (375)
.++++++.++....+...+. .... ..+.+++ +..-++.... .-.+.+++..++......
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~-------~~~~-~~~~~s~--~~~~~~~~~~-----------~~~i~~~d~~~g~~~~~~ 160 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKT-------GFQP-KSVRFID--NTRLAIPLLE-----------DEGMDVLDINSGQTVRLS 160 (433)
T ss_dssp CEEECCBTTCSEEEEEEEEC-------SSCB-CCCEESS--SSEEEEEBTT-----------SSSEEEEETTTCCEEEEC
T ss_pred EEEEECCCCCcceEEEEEcC-------CCCc-eEEEEeC--CCeEEEEeCC-----------CCeEEEEECCCCeEeeec
Q ss_pred ccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCC
Q 048294 199 SFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIE 276 (375)
Q Consensus 199 ~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~ 276 (375)
...........-. ++.+ +|.++... .....|..+|+.+.+....-.........-.+..-+..+.+... .+
T Consensus 161 ~~~~~~~~~~~v~-~~~~~~~~~~~~s~----~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 233 (433)
T 3bws_A 161 PPEKYKKKLGFVE-TISIPEHNELWVSQ----MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW--IS 233 (433)
T ss_dssp CCHHHHTTCCEEE-EEEEGGGTEEEEEE----GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET--TT
T ss_pred CcccccccCCcee-EEEEcCCCEEEEEE----CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec--CC
Q ss_pred cEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEec---------CCeEEEEeCCCCcEEEE
Q 048294 277 FCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ---------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 277 ~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~---------~~~~~~yd~~~~~~~~v 335 (375)
..+.+|-++............. ..-+.+.++|..++... ++.+..||+++++....
T Consensus 234 ~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 234 EDISVIDRKTKLEIRKTDKIGL---PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp TEEEEEETTTTEEEEECCCCSE---EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCCcEEEEecCCCC---ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee
No 61
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=68.94 E-value=70 Score=29.25 Aligned_cols=110 Identities=7% Similarity=0.048 Sum_probs=61.5
Q ss_pred eCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcC-ceeeE--
Q 048294 216 LDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKD-KEWTK-- 291 (375)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~-- 291 (375)
-+|.+||.. .....|..+|+.+.....+...... . . +. .-+|+..++.... .. -.||+++. ..|..
T Consensus 140 ~~g~lyv~d----~~~~~I~~id~~~g~~~~~~~~~~~--~-~-ia~~~~g~~l~~~d~~-~~-~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQ----RDDPRVRLISVDDNKVTTVHPGFKG--G-K-PAVTKDKQRVYSIGWE-GT-HTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEE----TTTTEEEEEETTTTEEEEEEETCCB--C-B-CEECTTSSEEEEEBSS-TT-CEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEe----cCCCcEEEEECCCCEEEEeeccCCC--C-c-eeEecCCCcEEEEecC-CC-ceEEEEEcCCCceeEE
Confidence 468999987 3457899999998777655322111 1 1 21 2344433333321 11 16777776 44442
Q ss_pred EEEECC-CCCccccEEEee-cCcEEEEecCCeEEEEeCCCCcEEEE
Q 048294 292 KLTVGP-FEGMFHPLGFWK-TGGFFAENQSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 292 ~~~i~~-~~~~~~~~~~~~-~~~ll~~~~~~~~~~yd~~~~~~~~v 335 (375)
.-.+.. ......-+++.+ ++.+++....+.++.||++++....+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 111212 111223455666 67777765567899999998876555
No 62
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=68.06 E-value=37 Score=30.54 Aligned_cols=114 Identities=10% Similarity=-0.004 Sum_probs=58.0
Q ss_pred cceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEE
Q 048294 108 DGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVY 187 (375)
Q Consensus 108 nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vy 187 (375)
+|+|++...++.++-.|..|++.++--......|. +.........+-.++.+... . .-.+..|
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--------~~~~~~~~~~~~~~~vv~p~-~--------dG~l~a~ 72 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--------IEIQEPSRLETYETLIIEPF-G--------DGNIYYF 72 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS--------EECCCSCTTTSSEEEEECCS-T--------TTEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc--------EEecCCccccCCcEEEEEEC-C--------CCEEEEE
Confidence 78888888887799999999876653222110110 11000001111123222111 1 2266777
Q ss_pred EcCCCCceeecccCCcc---cccCCCCcceE-------eCccEEEeeeeccCCceEEEEEECCCcee
Q 048294 188 NLSTNSWRYFESFKSSH---YHMPWYHDCVN-------LDGGCYWLLELRSNGHKVVLSFDLGDEVY 244 (375)
Q Consensus 188 ss~~~~Wr~~~~~~~~~---~~~~~~~~~v~-------~~G~lywl~~~~~~~~~~il~fDl~~e~~ 244 (375)
+..+|.|+-.-..+... +...... +|. .+|.+|.-. ....+.++|+.+.+-
T Consensus 73 ~~~~G~~~~~~~~~~lv~~SP~~~~~~-pvv~~~~~~~~~g~Vy~Gs-----~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 73 NAHQGLQKLPLSIRQLVSTSPLHLKTN-IVVNDSGKIVEDEKVYTGS-----MRTIMYTINMLNGEI 133 (339)
T ss_dssp ETTTEEEEEEEEHHHHHTTCSEEEECC-----------CCEEEEECE-----EEEEEEEEETTTCCE
T ss_pred ECCCCcEEeeeccccceeccccccCCC-ceeecccccccCCEEEEEe-----cCCEEEEEECCCCcE
Confidence 77777655322111000 0111223 555 899999877 467999999988754
No 63
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=67.08 E-value=66 Score=28.25 Aligned_cols=66 Identities=11% Similarity=-0.078 Sum_probs=37.2
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCc
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEE 331 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~ 331 (375)
+|++.+.+. .+..+.||-++. ........+........-+.+.+++.++....++.++.|+.....
T Consensus 216 ~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 216 SGNALAYAG--HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESG 283 (377)
T ss_dssp TSSCEEEEE--TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC--
T ss_pred CCCEEEEEe--CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCc
Confidence 565444443 467899999887 222222222222222234556678888877777778888877544
No 64
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.57 E-value=60 Score=27.58 Aligned_cols=202 Identities=8% Similarity=-0.105 Sum_probs=93.9
Q ss_pred EeeeecceEEEeeC-CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEe-cC-------
Q 048294 103 AGGPYDGIFCILGN-DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLW-DE------- 173 (375)
Q Consensus 103 ~~~s~nGLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~-~~------- 173 (375)
+.-+.+|-+.+... ...+.++||.|++...+....... ..... ..+.+|+... + .+.... ..
T Consensus 74 l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~----~~~~~-~~i~~d~~G~---l-~vtd~~~g~~~~~~~~ 144 (296)
T 3e5z_A 74 HCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGK----KLNSP-NDVCLAPDGS---L-WFSDPTYGIDKPEEGY 144 (296)
T ss_dssp EEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTE----ECCCC-CCEEECTTSC---E-EEEECSHHHHCGGGSS
T ss_pred eeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCC----CCCCC-CCEEECCCCC---E-EEECCccccccccccc
Confidence 33345776666553 456999999999877664321100 00011 3455566432 2 122110 00
Q ss_pred CCCCCCCCceEEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECC-Ccee---eee
Q 048294 174 KNSDLYDFSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLG-DEVY---EEI 247 (375)
Q Consensus 174 ~~~~~~~~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~-~e~~---~~i 247 (375)
..........+..|+.+ +.-+...... .... ++.+ +|.+++.. .....|..||+. +.++ ..+
T Consensus 145 ~~~~~~~~~~l~~~~~~-g~~~~~~~~~------~~~~-gi~~s~dg~~lv~~----~~~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 145 GGEMELPGRWVFRLAPD-GTLSAPIRDR------VKPN-GLAFLPSGNLLVSD----TGDNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp CCCCCSSSCEEEEECTT-SCEEEEECCC------SSEE-EEEECTTSCEEEEE----TTTTEEEEEEECSSSCEEEEEEE
T ss_pred cccccCCCcEEEEECCC-CCEEEeecCC------CCCc-cEEECCCCCEEEEe----CCCCeEEEEEECCCCcCcCCCeE
Confidence 00000011233444443 4433322111 0111 3433 57776433 345688889986 4444 111
Q ss_pred cCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEE-eecCcEEEEecCCeEEEEe
Q 048294 248 QGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGF-WKTGGFFAENQSNQMILYD 326 (375)
Q Consensus 248 ~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~-~~~~~ll~~~~~~~~~~yd 326 (375)
- .............-+|.|.+.. ...+.+|-.+ ..-......+ .. ..-+++ .+++..|+....+.++.++
T Consensus 213 ~-~~~~~~p~~i~~d~~G~l~v~~----~~~v~~~~~~-g~~~~~~~~~--~~-~~~~~f~~~d~~~L~v~t~~~l~~~~ 283 (296)
T 3e5z_A 213 F-TVEPGKTDGLRVDAGGLIWASA----GDGVHVLTPD-GDELGRVLTP--QT-TSNLCFGGPEGRTLYMTVSTEFWSIE 283 (296)
T ss_dssp E-CCSSSCCCSEEEBTTSCEEEEE----TTEEEEECTT-SCEEEEEECS--SC-CCEEEEESTTSCEEEEEETTEEEEEE
T ss_pred e-eCCCCCCCeEEECCCCCEEEEc----CCeEEEECCC-CCEEEEEECC--CC-ceeEEEECCCCCEEEEEcCCeEEEEE
Confidence 1 1111111111224477776655 3445555443 2222222222 22 222334 3566666666778999999
Q ss_pred CCCCcEEE
Q 048294 327 PRTEEMKN 334 (375)
Q Consensus 327 ~~~~~~~~ 334 (375)
++++++++
T Consensus 284 ~~~~~~~~ 291 (296)
T 3e5z_A 284 TNVRGLEH 291 (296)
T ss_dssp CSCCBCCC
T ss_pred cccccccc
Confidence 99998875
No 65
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=66.40 E-value=63 Score=27.77 Aligned_cols=103 Identities=7% Similarity=0.058 Sum_probs=54.5
Q ss_pred ceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCC----CcEEEEEEEcCceeeEEEEE-CCCCCcccc
Q 048294 231 HKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTI----EFCFEIWTMKDKEWTKKLTV-GPFEGMFHP 304 (375)
Q Consensus 231 ~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~----~~~~~iW~l~~~~W~~~~~i-~~~~~~~~~ 304 (375)
...|..+|..+.++..+. ..... .-+. .-+|+..++..... ...+.+|-++.........+ ........-
T Consensus 168 ~~~v~~~d~~~g~~~~~~---~~~~p-~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA---DLDHP-NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp CEEEEEECSSSCCCEEEE---EESSE-EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CCeEEEEcCCCCcEEEEe---cCCCC-cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 468999999888776653 11111 1121 23565333332211 13455555544322222221 111222334
Q ss_pred EEEeecCcEEEEecCCeEEEEeCCCCcEEEEEEe
Q 048294 305 LGFWKTGGFFAENQSNQMILYDPRTEEMKNFGLN 338 (375)
Q Consensus 305 ~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v~~~ 338 (375)
+.+..+|.+++.. .+.+..||++++.+..+..+
T Consensus 244 i~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 5666778866655 56799999988888777654
No 66
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=61.74 E-value=76 Score=27.12 Aligned_cols=106 Identities=12% Similarity=-0.065 Sum_probs=58.0
Q ss_pred ceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceee
Q 048294 213 CVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWT 290 (375)
Q Consensus 213 ~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~ 290 (375)
+++. +|.+||.. .....|..+|+.+.+...+..|.... .....-+|+|.+.. ...+.+|-.+...+.
T Consensus 18 p~w~~~~~~l~~~d----~~~~~i~~~d~~~~~~~~~~~~~~~~---~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 18 PVWEEVSNSLLFVD----IPAKKVCRWDSFTKQVQRVTMDAPVS---SVALRQSGGYVATI----GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEETTTTEEEEEE----TTTTEEEEEETTTCCEEEEECSSCEE---EEEEBTTSSEEEEE----TTEEEEEETTTTEEE
T ss_pred CeEECCCCEEEEEE----CCCCEEEEEECCCCcEEEEeCCCceE---EEEECCCCCEEEEE----CCeEEEEECCCCcEE
Confidence 4444 47899987 35678999999988777666653321 11113367754432 234444444334544
Q ss_pred EEEEECCCCCcccc--EEEeecCcEEEEec------------CCeEEEEeCCC
Q 048294 291 KKLTVGPFEGMFHP--LGFWKTGGFFAENQ------------SNQMILYDPRT 329 (375)
Q Consensus 291 ~~~~i~~~~~~~~~--~~~~~~~~ll~~~~------------~~~~~~yd~~~ 329 (375)
............++ +.+.++|.+++... .+.++.+|.+.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 44333221112223 44556788776542 24688888764
No 67
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=61.60 E-value=75 Score=26.99 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=67.1
Q ss_pred ceE-eCccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceee
Q 048294 213 CVN-LDGGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWT 290 (375)
Q Consensus 213 ~v~-~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~ 290 (375)
|+. .+|.+|--+. ..+...|..+|+.+.+. ..+++|..... .-+...+++|..+... +. .+|+.+-..-.
T Consensus 25 GL~~~~~~LyestG--~~g~S~v~~vD~~tgkv~~~~~l~~~~fg--eGi~~~~~~ly~ltw~--~~--~v~v~D~~tl~ 96 (243)
T 3mbr_X 25 GLFYLRGHLYESTG--ETGRSSVRKVDLETGRILQRAEVPPPYFG--AGIVAWRDRLIQLTWR--NH--EGFVYDLATLT 96 (243)
T ss_dssp EEEEETTEEEEEEC--CTTSCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEESS--SS--EEEEEETTTTE
T ss_pred cEEEECCEEEEECC--CCCCceEEEEECCCCCEEEEEeCCCCcce--eEEEEeCCEEEEEEee--CC--EEEEEECCcCc
Confidence 444 4556655441 12356899999999876 55788765421 1133457888877653 33 34555543334
Q ss_pred EEEEECCCCCccccEEEeecC-cEEEEecCCeEEEEeCCCCcEE-EEEE
Q 048294 291 KKLTVGPFEGMFHPLGFWKTG-GFFAENQSNQMILYDPRTEEMK-NFGL 337 (375)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~-~ll~~~~~~~~~~yd~~~~~~~-~v~~ 337 (375)
++.++... ....++..++ .+++...++++..+|++|.+.. .+.+
T Consensus 97 ~~~ti~~~---~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 97 PRARFRYP---GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEECS---SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCC---CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 44455532 1234444554 4666666888999999986554 4554
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=61.47 E-value=79 Score=27.23 Aligned_cols=203 Identities=7% Similarity=-0.019 Sum_probs=101.0
Q ss_pred eecc-eEEEee-CCCeEEEEccccccee-ccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCc
Q 048294 106 PYDG-IFCILG-NDNRLTLWNPANKEYR-HVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFS 182 (375)
Q Consensus 106 s~nG-Ll~~~~-~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 182 (375)
+.+| .+.+.. .++.+.++|+.|++.. .++......+........ .++.+++..+. ++ +..... ..
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~--l~-~~~~~~--------~~ 164 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP-RELVADDATNT--VY-ISGIGK--------ES 164 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE-EEEEEETTTTE--EE-EEEESS--------SC
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCC-ceEEECCCCCE--EE-EEecCC--------Cc
Confidence 3344 354444 3467999999998764 344322211111111112 55667665442 22 222111 23
Q ss_pred eEEEEEcCCCCcee-ecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCcc-ce
Q 048294 183 QTAVYNLSTNSWRY-FESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVY-VV 259 (375)
Q Consensus 183 ~~~vyss~~~~Wr~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~-~~ 259 (375)
.+.+++..++.=.. +.... . . ...- .+.-+|...+.. .....|..+|+.+.+.. .+..+....... ..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~--~-~-~~~~-~~s~dg~~l~~~----~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 235 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTG--K-M-STGL-ALDSEGKRLYTT----NADGELITIDTADNKILSRKKLLDDGKEHFFIN 235 (353)
T ss_dssp EEEEEETTTTEEEEEECCCC--T-T-CCCC-EEETTTTEEEEE----CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEE
T ss_pred eEEEEcCCCCceEEEecCCC--C-c-cceE-EECCCCCEEEEE----cCCCeEEEEECCCCeEEEEEEcCCCCCCcccce
Confidence 67888887653221 11010 0 0 1111 333466644444 23567889999987764 345433211111 11
Q ss_pred eE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcE-EEEe-cCCeEEEEeCCCCcEEE
Q 048294 260 MG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGF-FAEN-QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 260 l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~l-l~~~-~~~~~~~yd~~~~~~~~ 334 (375)
+. .-+|+..++... ....+.+|-++..+-.....++. ..-+.+.++|+. ++.. .++.+..||.++++...
T Consensus 236 ~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 236 ISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 22 235553333332 45677777766533333333322 133566778874 4444 36889999999887654
No 69
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=60.52 E-value=1.4e+02 Score=29.82 Aligned_cols=140 Identities=7% Similarity=-0.034 Sum_probs=69.8
Q ss_pred eEEEEEcCCCCceeecccC-Ccc-cc-cCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCC-CCCc
Q 048294 183 QTAVYNLSTNSWRYFESFK-SSH-YH-MPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCL-PQSV 256 (375)
Q Consensus 183 ~~~vyss~~~~Wr~~~~~~-~~~-~~-~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~-~~~~ 256 (375)
.+..|+..++.++...... .+. .. ...-. +++. +|.+.|+.. ....|..||..++++..+..... ....
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt----~~~Gl~~~d~~~~~~~~~~~~~~~l~~~ 452 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGT----HAGGLSILHRNSGQVENFNQRNSQLVNE 452 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEE----TTTEEEEEETTTCCEEEECTTTSCCSCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEe----CcCceeEEeCCCCcEEEeecCCCCcCCC
Confidence 5667777777776654221 000 00 00001 3333 577577762 34579999999999887754221 1111
Q ss_pred c-cee-EEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEEC----CCCCccccEEEeecCcEEEEecCCeEEEEeCCCC
Q 048294 257 Y-VVM-GLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVG----PFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTE 330 (375)
Q Consensus 257 ~-~~l-~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~----~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~ 330 (375)
. ..+ ...+|.|.+... ..+.++-.+...|....... ........+....+|.+++... +.++.||++++
T Consensus 453 ~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~ 527 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL 527 (795)
T ss_dssp CEEEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT
T ss_pred eeEEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC
Confidence 1 112 233677666543 22333322225554432110 0001112223345577877765 67999998887
Q ss_pred cE
Q 048294 331 EM 332 (375)
Q Consensus 331 ~~ 332 (375)
++
T Consensus 528 ~~ 529 (795)
T 4a2l_A 528 DI 529 (795)
T ss_dssp EE
T ss_pred eE
Confidence 76
No 70
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=59.26 E-value=1.1e+02 Score=30.25 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=58.7
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCce--eeee-cCCCCCC-----Cc-cceeEEecCeEEEEEecCCCcEEEEEE
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDEV--YEEI-QGPCLPQ-----SV-YVVMGLYKECISLLVLKTIEFCFEIWT 283 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e~--~~~i-~lP~~~~-----~~-~~~l~~~~g~L~l~~~~~~~~~~~iW~ 283 (375)
++..+|.+|... ....+.++|..+.+ |+.- ..+.... .. ..-....+|++.+... +..+..+-
T Consensus 62 P~v~~g~vyv~~-----~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~alD 133 (668)
T 1kv9_A 62 PLFHDGVIYTSM-----SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLIALD 133 (668)
T ss_dssp CEEETTEEEEEE-----GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEEEEE
T ss_pred CEEECCEEEEEC-----CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CCEEEEEE
Confidence 789999999877 35689999987654 5431 2221100 00 0112234666554332 23333332
Q ss_pred EcC--ceeeEEEEECCCC--C-ccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEEE
Q 048294 284 MKD--KEWTKKLTVGPFE--G-MFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 284 l~~--~~W~~~~~i~~~~--~-~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~v 335 (375)
.+. ..|..... .... . ...|+. .++.+++... ++.++.||.+|++..+-
T Consensus 134 ~~tG~~~W~~~~~-~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 134 AKTGKAIWSQQTT-DPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp TTTCCEEEEEECS-CTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCCCCEeeeeccC-CCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 222 56765431 1110 1 123432 3455555443 36899999999887753
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=59.26 E-value=89 Score=27.10 Aligned_cols=65 Identities=8% Similarity=0.157 Sum_probs=43.9
Q ss_pred CeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeec--CcEEE-EecCCeEEEEeCCCCc
Q 048294 265 ECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKT--GGFFA-ENQSNQMILYDPRTEE 331 (375)
Q Consensus 265 g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~--~~ll~-~~~~~~~~~yd~~~~~ 331 (375)
|.+.+.+. .+..+.||-++...|.....+........-+.+.++ +.+++ ...++.+..||++++.
T Consensus 69 ~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCEEEEec--cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 66655555 467899999998777777766543333344455566 66554 4557889999998873
No 72
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=59.25 E-value=1e+02 Score=27.91 Aligned_cols=185 Identities=11% Similarity=0.031 Sum_probs=91.5
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYF 197 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~ 197 (375)
+.+.++|..+++.+.|..... .. ..+.+.|..+ +++.... .. ....+.+++..++..+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~---------~v-~~~~~Spdg~--~la~~s~-~~-------~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ---------PL-MSPAWSPDGS--KLAYVTF-ES-------GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS---------CE-EEEEECTTSS--EEEEEEC-TT-------SSCEEEEEETTTCCEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC---------cc-eeeEEcCCCC--EEEEEEe-cC-------CCcEEEEEECCCCcEEEe
Confidence 579999988766555532211 11 4455555432 2322221 11 135788999998877655
Q ss_pred cccCCcccccCCCCcceEeCcc-EEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCC
Q 048294 198 ESFKSSHYHMPWYHDCVNLDGG-CYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTI 275 (375)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~ 275 (375)
....... ... ...-+|. +.+... ......|..+|+.+.+...+.... .. ...+. .-+|+..++... .
T Consensus 219 ~~~~~~~----~~~-~~spdg~~la~~~~--~~g~~~i~~~d~~~~~~~~l~~~~--~~-~~~~~~spdg~~l~~~s~-~ 287 (415)
T 2hqs_A 219 ASFPRHN----GAP-AFSPDGSKLAFALS--KTGSLNLYVMDLASGQIRQVTDGR--SN-NTEPTWFPDSQNLAFTSD-Q 287 (415)
T ss_dssp ECCSSCE----EEE-EECTTSSEEEEEEC--TTSSCEEEEEETTTCCEEECCCCS--SC-EEEEEECTTSSEEEEEEC-T
T ss_pred ecCCCcc----cCE-EEcCCCCEEEEEEe--cCCCceEEEEECCCCCEEeCcCCC--Cc-ccceEECCCCCEEEEEEC-C
Confidence 4322110 000 1222564 444431 123457889999887765442211 11 11111 236664444432 2
Q ss_pred CcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEe-c---CCeEEEEeCCCCcEEEEE
Q 048294 276 EFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN-Q---SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 276 ~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~-~---~~~~~~yd~~~~~~~~v~ 336 (375)
.....||.++- .. ...+.........+.+.++|+.++.. . ...+..+|+++++.+.+.
T Consensus 288 ~g~~~i~~~d~~~~~---~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 288 AGRPQVYKVNINGGA---PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp TSSCEEEEEETTSSC---CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred CCCcEEEEEECCCCC---EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 33456666654 22 11222111112234556788765443 2 247999999998886653
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=58.06 E-value=16 Score=32.54 Aligned_cols=137 Identities=9% Similarity=0.146 Sum_probs=62.9
Q ss_pred eEEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCce-eeee-cCCCCCCCccc
Q 048294 183 QTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEV-YEEI-QGPCLPQSVYV 258 (375)
Q Consensus 183 ~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~-~~~i-~lP~~~~~~~~ 258 (375)
.+.+|+..++.|+....... +.... . ++.. +|...... .....|..+|+.+.+ +... .+..... ...
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~-h~~~v--~-~~~~s~~~~~l~s~----s~d~~v~vwd~~~~~~~~~~~~~~~~~~-~v~ 104 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSD-HDKIV--T-CVDWAPKSNRIVTC----SQDRNAYVYEKRPDGTWKQTLVLLRLNR-AAT 104 (377)
T ss_dssp CBCEEEEETTEEEECCCBCC-CSSCE--E-EEEECTTTCCEEEE----ETTSSEEEC------CCCCEEECCCCSS-CEE
T ss_pred EEEEEEccCCceEEEEEEec-CCceE--E-EEEEeCCCCEEEEE----eCCCeEEEEEcCCCCceeeeeEecccCC-ceE
Confidence 56788888877766553321 10000 0 1111 23322222 123456777777765 3222 1211111 111
Q ss_pred eeE-EecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECC-CCCccccEEEeecCcEEEE-ecCCeEEEEeCCCC
Q 048294 259 VMG-LYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGP-FEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTE 330 (375)
Q Consensus 259 ~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~-~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~ 330 (375)
.+. .-+|++.+.+. .+..+.||-++. ..|.....+.. ......-+.+.+++.+++. ..++.+..||++++
T Consensus 105 ~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGS--GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp EEECCTTSSCCEEEE--SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred EEEECCCCCEEEEEe--cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 122 22565555444 467799999888 55666666653 2222344555677776554 45778999998643
No 74
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=57.91 E-value=88 Score=26.65 Aligned_cols=185 Identities=9% Similarity=0.005 Sum_probs=90.1
Q ss_pred eEEEeeCCCeEEEEcccccceec-cCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEE
Q 048294 110 IFCILGNDNRLTLWNPANKEYRH-VPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYN 188 (375)
Q Consensus 110 Ll~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (375)
+|.....++.++++|+.|++.++ ++......+ ......+.. . ++. . . ...+..|+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~---------~~~~~~pdG-~--ilv-s---~--------~~~V~~~d 62 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWEC---------NSVAATKAG-E--ILF-S---Y--------SKGAKMIT 62 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCC---------CEEEECTTS-C--EEE-E---C--------BSEEEEEC
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCC---------cCeEECCCC-C--EEE-e---C--------CCCEEEEC
Confidence 33333456679999998987664 333211000 112223322 2 222 1 1 12566777
Q ss_pred cCCC--CceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCc---ccee-EE
Q 048294 189 LSTN--SWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSV---YVVM-GL 262 (375)
Q Consensus 189 s~~~--~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~---~~~l-~~ 262 (375)
. ++ .|+-..... .. .... .+..||.++.... .....++.||...+....+.+....... ...+ ..
T Consensus 63 ~-~G~~~W~~~~~~~-~~---~~~~-~~~~dG~~lv~~~---~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~ 133 (276)
T 3no2_A 63 R-DGRELWNIAAPAG-CE---MQTA-RILPDGNALVAWC---GHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKN 133 (276)
T ss_dssp T-TSCEEEEEECCTT-CE---EEEE-EECTTSCEEEEEE---STTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEEC
T ss_pred C-CCCEEEEEcCCCC-cc---cccc-EECCCCCEEEEec---CCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceEC
Confidence 7 44 476443110 01 1111 4556777766541 1256888999866544444443221110 0111 12
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEEec-CCeEEEEeCCCCcEEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQ-SNQMILYDPRTEEMKN 334 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~-~~~~~~yd~~~~~~~~ 334 (375)
.+|.+.++.. ....+..|-.+. ..|.... .. .. .-.....+|.+++... +++++.+|++|+++.+
T Consensus 134 ~~G~~lv~~~--~~~~v~~~d~~G~~~w~~~~--~~-~~--~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 134 KKGNYLVPLF--ATSEVREIAPNGQLLNSVKL--SG-TP--FSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp TTSCEEEEET--TTTEEEEECTTSCEEEEEEC--SS-CC--CEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred CCCCEEEEec--CCCEEEEECCCCCEEEEEEC--CC-Cc--cceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 3566544433 344565555554 4555432 11 11 1123446788777654 5579999999766653
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=57.31 E-value=87 Score=26.39 Aligned_cols=27 Identities=15% Similarity=0.413 Sum_probs=19.6
Q ss_pred eecceEEEeeCCCeEEEEcccccceecc
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHV 133 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~L 133 (375)
|.+|+|.... ++++.|||..|++...+
T Consensus 34 S~~~~lAvg~-D~tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVAL-DNSVYLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEEE-TTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEe-CCEEEEEECCCCCEEEE
Confidence 5577665544 45699999999987654
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=57.15 E-value=1e+02 Score=27.17 Aligned_cols=189 Identities=9% Similarity=-0.050 Sum_probs=91.1
Q ss_pred eeeecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCce
Q 048294 104 GGPYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQ 183 (375)
Q Consensus 104 ~~s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (375)
.-+.+|.++....++.+.+++..+++....-... . .....+.+.+... .+.... . .-.
T Consensus 213 ~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~--------~-~~i~~~~~~~~~~---~l~~~~--~--------d~~ 270 (425)
T 1r5m_A 213 EWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH--------H-GPISVLEFNDTNK---LLLSAS--D--------DGT 270 (425)
T ss_dssp EEEETTEEEEECGGGCEEEEETTCSSCSEEECCC--------S-SCEEEEEEETTTT---EEEEEE--T--------TSC
T ss_pred EEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccC--------C-CceEEEEECCCCC---EEEEEc--C--------CCE
Confidence 3345677766666667999999887543221111 0 1114555555432 222221 1 226
Q ss_pred EEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCccceeE-
Q 048294 184 TAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVMG- 261 (375)
Q Consensus 184 ~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l~- 261 (375)
+.+|+..++.-...-.. +......- ...-+| +.++. .....|..+|+.+.+... +...... ...+.
T Consensus 271 i~i~d~~~~~~~~~~~~---~~~~i~~~-~~~~~~--~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~---i~~~~~ 338 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYG---HSQSIVSA-SWVGDD--KVISC---SMDGSVRLWSLKQNTLLALSIVDGVP---IFAGRI 338 (425)
T ss_dssp EEEECSSSBSCSEEECC---CSSCEEEE-EEETTT--EEEEE---ETTSEEEEEETTTTEEEEEEECTTCC---EEEEEE
T ss_pred EEEEECCCCccceEecC---CCccEEEE-EECCCC--EEEEE---eCCCcEEEEECCCCcEeEecccCCcc---EEEEEE
Confidence 77888776532211110 00000000 122245 22221 245688889998766432 2221111 11121
Q ss_pred EecCeEEEEEecCCCcEEEEEEEcC-c----e-------------eeEEEEECCCCC--ccccEEEeecCcEEE-EecCC
Q 048294 262 LYKECISLLVLKTIEFCFEIWTMKD-K----E-------------WTKKLTVGPFEG--MFHPLGFWKTGGFFA-ENQSN 320 (375)
Q Consensus 262 ~~~g~L~l~~~~~~~~~~~iW~l~~-~----~-------------W~~~~~i~~~~~--~~~~~~~~~~~~ll~-~~~~~ 320 (375)
.-+|++.++.. .+..+.||-++. . . +.....+..... ...-+.+.+++..|+ ...++
T Consensus 339 s~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 339 SQDGQKYAVAF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp CTTSSEEEEEE--TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred cCCCCEEEEEE--CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 22566555554 466899998876 2 0 113333332211 223445566777654 44577
Q ss_pred eEEEEeCC
Q 048294 321 QMILYDPR 328 (375)
Q Consensus 321 ~~~~yd~~ 328 (375)
.+..||++
T Consensus 417 ~i~iw~~~ 424 (425)
T 1r5m_A 417 EGSVVAIP 424 (425)
T ss_dssp CCEEEECC
T ss_pred eEEEEeec
Confidence 78899875
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=56.06 E-value=85 Score=25.89 Aligned_cols=192 Identities=9% Similarity=0.067 Sum_probs=90.5
Q ss_pred EeeeecceEEE-ee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCC
Q 048294 103 AGGPYDGIFCI-LG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYD 180 (375)
Q Consensus 103 ~~~s~nGLl~~-~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 180 (375)
+.-+.+|-+.+ .. ..+.+.++|+.++....++..... .. .++.+|+... +. +... .
T Consensus 29 i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~p-~~i~~~~~g~---l~-v~~~--~------- 86 (270)
T 1rwi_B 29 VAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY--------QP-QGLAVDGAGT---VY-VTDF--N------- 86 (270)
T ss_dssp EEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCC--------SC-CCEEECTTCC---EE-EEET--T-------
T ss_pred eEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcC--------Cc-ceeEECCCCC---EE-EEcC--C-------
Confidence 33344666655 53 345689999988776655433221 11 5566666432 22 2221 1
Q ss_pred CceEEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccc
Q 048294 181 FSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYV 258 (375)
Q Consensus 181 ~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~ 258 (375)
-.+.+|+..++.-+...... . .... ++.+ +|.+|+.. .....|..+|..+........ ........
T Consensus 87 -~~i~~~d~~~~~~~~~~~~~--~---~~p~-~i~~~~~g~l~v~~----~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~ 154 (270)
T 1rwi_B 87 -NRVVTLAAGSNNQTVLPFDG--L---NYPE-GLAVDTQGAVYVAD----RGNNRVVKLAAGSKTQTVLPF-TGLNDPDG 154 (270)
T ss_dssp -TEEEEECTTCSCCEECCCCS--C---SSEE-EEEECTTCCEEEEE----GGGTEEEEECTTCCSCEECCC-CSCCSCCC
T ss_pred -CEEEEEeCCCceEeeeecCC--c---CCCc-ceEECCCCCEEEEE----CCCCEEEEEECCCceeEeecc-ccCCCcee
Confidence 25667776665433332110 0 0011 3333 68877654 235578888877654433211 11111111
Q ss_pred eeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCcccc--EEEeecCcEEEEec-CCeEEEEeCCCCcEEE
Q 048294 259 VMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHP--LGFWKTGGFFAENQ-SNQMILYDPRTEEMKN 334 (375)
Q Consensus 259 ~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~--~~~~~~~~ll~~~~-~~~~~~yd~~~~~~~~ 334 (375)
....-+|+|.+... ....+.+|-.+. .... . .......| +++.++|.+++... ++.+..||++++....
T Consensus 155 i~~~~~g~l~v~~~--~~~~i~~~~~~~~~~~~----~-~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 155 VAVDNSGNVYVTDT--DNNRVVKLEAESNNQVV----L-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp EEECTTCCEEEEEG--GGTEEEEECTTTCCEEE----C-CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred EEEeCCCCEEEEEC--CCCEEEEEecCCCceEe----e-cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 11123677655443 234555555443 2111 1 11112333 44556677777654 5689999998876554
Q ss_pred E
Q 048294 335 F 335 (375)
Q Consensus 335 v 335 (375)
+
T Consensus 228 ~ 228 (270)
T 1rwi_B 228 L 228 (270)
T ss_dssp C
T ss_pred e
Confidence 3
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=55.29 E-value=1.1e+02 Score=26.91 Aligned_cols=187 Identities=12% Similarity=0.081 Sum_probs=94.0
Q ss_pred eEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEE
Q 048294 110 IFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYN 188 (375)
Q Consensus 110 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vys 188 (375)
.+++.. .++.+.+||..|++....-.... .. .++.+++... +++. ... . .-.+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---------~~-~~~~~s~dg~--~l~~-~~~-~--------d~~i~v~d 60 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---------NP-MGAVISPDGT--KVYV-ANA-H--------SNDVSIID 60 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---------SE-EEEEECTTSS--EEEE-EEG-G--------GTEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---------Cc-ceEEECCCCC--EEEE-ECC-C--------CCeEEEEE
Confidence 344444 45679999999987654322111 11 4555555432 2222 211 1 23788888
Q ss_pred cCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCccceeE-EecCe
Q 048294 189 LSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVMG-LYKEC 266 (375)
Q Consensus 189 s~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l~-~~~g~ 266 (375)
..++.-...-..... ...- ...-+|..-+++. .....|..+|+.+.+... +...... ..+. .-+|+
T Consensus 61 ~~~~~~~~~~~~~~~----v~~~-~~spdg~~l~~~~---~~~~~v~v~d~~~~~~~~~~~~~~~~----~~~~~s~dg~ 128 (391)
T 1l0q_A 61 TATNNVIATVPAGSS----PQGV-AVSPDGKQVYVTN---MASSTLSVIDTTSNTVAGTVKTGKSP----LGLALSPDGK 128 (391)
T ss_dssp TTTTEEEEEEECSSS----EEEE-EECTTSSEEEEEE---TTTTEEEEEETTTTEEEEEEECSSSE----EEEEECTTSS
T ss_pred CCCCeEEEEEECCCC----ccce-EECCCCCEEEEEE---CCCCEEEEEECCCCeEEEEEeCCCCc----ceEEECCCCC
Confidence 887754322111100 0000 1222455333331 234678899999876533 3322211 1122 23566
Q ss_pred EEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEE-Ee-cCCeEEEEeCCCCcEEE
Q 048294 267 ISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFA-EN-QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 267 L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~-~~-~~~~~~~yd~~~~~~~~ 334 (375)
..++... .+..+.+|-++........... . ....+.+.+++..++ .. .++.+..||+++++...
T Consensus 129 ~l~~~~~-~~~~v~~~d~~~~~~~~~~~~~--~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 129 KLYVTNN-GDKTVSVINTVTKAVINTVSVG--R-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEEEET-TTTEEEEEETTTTEEEEEEECC--S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeC-CCCEEEEEECCCCcEEEEEecC--C-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 4434432 4678999987764333333222 1 123455667776654 33 36789999999886654
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=54.81 E-value=1e+02 Score=26.32 Aligned_cols=110 Identities=8% Similarity=-0.004 Sum_probs=58.7
Q ss_pred Ccc-EEEeeeeccCCceEEEEEECC--Cceeeee-cCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcC-ceee
Q 048294 217 DGG-CYWLLELRSNGHKVVLSFDLG--DEVYEEI-QGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKD-KEWT 290 (375)
Q Consensus 217 ~G~-lywl~~~~~~~~~~il~fDl~--~e~~~~i-~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~ 290 (375)
+|. +|... .....|..||+. ++++..+ .++.... ...+. .-+|+..++... ....+.+|-+++ ....
T Consensus 48 dg~~l~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~ 120 (343)
T 1ri6_A 48 DKRYLYVGV----RPEFRVLAYRIAPDDGALTFAAESALPGS--LTHISTDHQGQFVFVGSY-NAGNVSVTRLEDGLPVG 120 (343)
T ss_dssp TSSEEEEEE----TTTTEEEEEEECTTTCCEEEEEEEECSSC--CSEEEECTTSSEEEEEET-TTTEEEEEEEETTEEEE
T ss_pred CCCEEEEee----cCCCeEEEEEecCCCCceeeccccccCCC--CcEEEEcCCCCEEEEEec-CCCeEEEEECCCCcccc
Confidence 565 55544 222567777766 6565543 2222111 11122 336664444432 466799998854 3333
Q ss_pred EEEEECCCCCccccEEEeecCcEEE-Ee-cCCeEEEEeCCC-CcEEE
Q 048294 291 KKLTVGPFEGMFHPLGFWKTGGFFA-EN-QSNQMILYDPRT-EEMKN 334 (375)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~~ll~-~~-~~~~~~~yd~~~-~~~~~ 334 (375)
....+.... ....+.+.++|+.++ .. .++.+..||+++ ++++.
T Consensus 121 ~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 121 VVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred ccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceee
Confidence 344444221 123345667777544 44 478899999987 76654
No 80
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=54.39 E-value=1.2e+02 Score=29.29 Aligned_cols=109 Identities=10% Similarity=0.037 Sum_probs=57.8
Q ss_pred ceEeCccEEEeeeeccCC-ceEEEEEEC-CCc--eeeeecCCCCCC-------Cc-cceeEEecCeEEEEEecCCCcEEE
Q 048294 213 CVNLDGGCYWLLELRSNG-HKVVLSFDL-GDE--VYEEIQGPCLPQ-------SV-YVVMGLYKECISLLVLKTIEFCFE 280 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~-~~~il~fDl-~~e--~~~~i~lP~~~~-------~~-~~~l~~~~g~L~l~~~~~~~~~~~ 280 (375)
++..+|.+|... . ...+.++|. .+. .|+. .++.... .. ..-....+|++.+... +..
T Consensus 58 P~v~~g~vyv~~-----~~~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~-- 126 (571)
T 2ad6_A 58 PLVIGDMMYVHS-----AFPNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGH-- 126 (571)
T ss_dssp CEEETTEEEEEC-----STTTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSE--
T ss_pred cEEECCEEEEEe-----CCCCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CCE--
Confidence 888999999876 3 468999998 654 4543 3322110 00 0112234666554432 222
Q ss_pred EEEEc--C--ceeeEEEEECC-CCC-ccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEE
Q 048294 281 IWTMK--D--KEWTKKLTVGP-FEG-MFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKN 334 (375)
Q Consensus 281 iW~l~--~--~~W~~~~~i~~-~~~-~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~ 334 (375)
|..++ . ..|.....-.. ... ...|+. .++.+++... ++.++.||.+|++..+
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 33333 2 46765421100 001 123432 2456666544 5789999999988775
No 81
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=53.81 E-value=1.1e+02 Score=26.36 Aligned_cols=110 Identities=11% Similarity=0.046 Sum_probs=62.6
Q ss_pred ccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEEC
Q 048294 218 GGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVG 296 (375)
Q Consensus 218 G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~ 296 (375)
|.+|--+. ......|..+|+.+.+- ..+++|..... .-+...+++|.+... .+.. +++.+-..-..+.+|.
T Consensus 32 g~Lyvstg--~~~~s~v~~iD~~tg~v~~~i~l~~~~fg--eGi~~~g~~lyv~t~--~~~~--v~viD~~t~~v~~~i~ 103 (266)
T 2iwa_A 32 DTLFESTG--LYGRSSVRQVALQTGKVENIHKMDDSYFG--EGLTLLNEKLYQVVW--LKNI--GFIYDRRTLSNIKNFT 103 (266)
T ss_dssp TEEEEEEC--STTTCEEEEEETTTCCEEEEEECCTTCCE--EEEEEETTEEEEEET--TCSE--EEEEETTTTEEEEEEE
T ss_pred CeEEEECC--CCCCCEEEEEECCCCCEEEEEecCCCcce--EEEEEeCCEEEEEEe--cCCE--EEEEECCCCcEEEEEE
Confidence 56666541 12357899999998875 45666653221 113334667766654 2333 5555543334444554
Q ss_pred CCCCccccEEEeecCc-EEEEecCCeEEEEeCCCCcEE-EEEE
Q 048294 297 PFEGMFHPLGFWKTGG-FFAENQSNQMILYDPRTEEMK-NFGL 337 (375)
Q Consensus 297 ~~~~~~~~~~~~~~~~-ll~~~~~~~~~~yd~~~~~~~-~v~~ 337 (375)
.. .....++..+|+ +++...++.+...|++|.+.. .+.+
T Consensus 104 ~g--~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 104 HQ--MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp CC--SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CC--CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 32 123344555654 566666788999999996644 4554
No 82
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=52.69 E-value=83 Score=31.12 Aligned_cols=111 Identities=18% Similarity=0.089 Sum_probs=58.8
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCce--eeeecCCCCCC--------CccceeEEecCeEEEEEecCCCcEEEEE
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDEV--YEEIQGPCLPQ--------SVYVVMGLYKECISLLVLKTIEFCFEIW 282 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e~--~~~i~lP~~~~--------~~~~~l~~~~g~L~l~~~~~~~~~~~iW 282 (375)
++..+|.+|... ....|.++|..+.+ |+. .++.... ....-+...+|++.+... +..+..+
T Consensus 73 P~v~~g~vyv~~-----~~~~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~al 143 (677)
T 1kb0_A 73 PVVVDGIMYVSA-----SWSVVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLIAL 143 (677)
T ss_dssp CEEETTEEEEEC-----GGGCEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEEEE
T ss_pred CEEECCEEEEEC-----CCCeEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEEEE
Confidence 788999999876 35689999987764 443 2221110 000112234565554322 3333333
Q ss_pred EEcC--ceeeEEEEECCC--CC-ccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEE
Q 048294 283 TMKD--KEWTKKLTVGPF--EG-MFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKN 334 (375)
Q Consensus 283 ~l~~--~~W~~~~~i~~~--~~-~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~ 334 (375)
-.+. ..|......... .. ...|+. .++.+++... ++.++.||.+|++..+
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3333 567654210110 01 123432 3455555443 4789999999988775
No 83
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=52.68 E-value=1.2e+02 Score=26.40 Aligned_cols=202 Identities=10% Similarity=0.057 Sum_probs=90.0
Q ss_pred ecceEEEee-CCCeEEEEccccc--ceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCce
Q 048294 107 YDGIFCILG-NDNRLTLWNPANK--EYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQ 183 (375)
Q Consensus 107 ~nGLl~~~~-~~~~~~V~NP~T~--~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (375)
.+|-+.+.. ..+++.++++.++ ....+................ .++.+|+..+..-| ..... ...
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P-~~ia~~~~~g~lyv---~d~~~--------~~~ 167 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQP-TDVAVEPSTGAVFV---SDGYC--------NSR 167 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSE-EEEEECTTTCCEEE---EECSS--------CCE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCC-cEEEEeCCCCeEEE---EeCCC--------CCe
Confidence 356555554 3456888888765 334443211100000011123 67888874443222 11101 336
Q ss_pred EEEEEcCCCCceeecccCC-----cccccCCCCcceEe--C-ccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCC
Q 048294 184 TAVYNLSTNSWRYFESFKS-----SHYHMPWYHDCVNL--D-GGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQ 254 (375)
Q Consensus 184 ~~vyss~~~~Wr~~~~~~~-----~~~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~ 254 (375)
+.+|+.....-+....... +... .... ++.+ + |.+|+.. .....|..||+.+.++ ..+..|....
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~-gia~d~~~g~l~v~d----~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQF-SVPH-SLALVPHLDQLCVAD----RENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEE-SCEE-EEEEETTTTEEEEEE----TTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCccc-CCCc-EEEEECCCCEEEEEE----CCCCEEEEEECCCCcEEEEEeccccCC
Confidence 7777744332222221100 0111 1112 5555 4 7888766 4567899999986555 4455443321
Q ss_pred CccceeEEecCeEEEEEec-----CCCcEEEEEEEcCceeeEEEEECCC-CCcccc--EEEeecCcEEEEec-CCeEEEE
Q 048294 255 SVYVVMGLYKECISLLVLK-----TIEFCFEIWTMKDKEWTKKLTVGPF-EGMFHP--LGFWKTGGFFAENQ-SNQMILY 325 (375)
Q Consensus 255 ~~~~~l~~~~g~L~l~~~~-----~~~~~~~iW~l~~~~W~~~~~i~~~-~~~~~~--~~~~~~~~ll~~~~-~~~~~~y 325 (375)
... .+....|.+...... .....+.+|-++..... ..+... .....| +++.++|.+++... ++++..|
T Consensus 242 ~~~-~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~--~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 242 NVF-AISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII--DVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKF 318 (329)
T ss_dssp CEE-EEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE--EEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEE
T ss_pred Ccc-eeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE--EEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEE
Confidence 111 111112322222211 12335666665553322 233321 122233 44556676655543 4567777
Q ss_pred eCCC
Q 048294 326 DPRT 329 (375)
Q Consensus 326 d~~~ 329 (375)
+++.
T Consensus 319 ~~~~ 322 (329)
T 3fvz_A 319 TLTE 322 (329)
T ss_dssp EEEE
T ss_pred eCCc
Confidence 6644
No 84
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=52.41 E-value=1.6e+02 Score=27.99 Aligned_cols=113 Identities=11% Similarity=0.031 Sum_probs=66.6
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCC-ccceeEEec-CeEEEEEecCCCcEEEEEEEcC-----ce
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQS-VYVVMGLYK-ECISLLVLKTIEFCFEIWTMKD-----KE 288 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~-~~~~l~~~~-g~L~l~~~~~~~~~~~iW~l~~-----~~ 288 (375)
+|...+.+. .....|..+|+.+.+... ++....... ....+..-+ |.+ ++.....+.++.||-++. ..
T Consensus 334 dg~~l~va~---~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~-~~s~~~~d~~V~v~d~~~~~~~~~~ 409 (543)
T 1nir_A 334 SHRYFMTAA---NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV-WSTSHLGDGSISLIGTDPKNHPQYA 409 (543)
T ss_dssp TSCEEEEEE---GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEE-EEEEBSSSSEEEEEECCTTTCTTTB
T ss_pred CCCEEEEEe---cCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccE-EEeccCCCceEEEEEeCCCCCchhc
Confidence 465444331 234578889999887643 343211111 011121223 554 344332467899999876 34
Q ss_pred eeEEEEECCCCCccccEEEeecCcEEEEec--------CCeEEEEeCCCCcEE
Q 048294 289 WTKKLTVGPFEGMFHPLGFWKTGGFFAENQ--------SNQMILYDPRTEEMK 333 (375)
Q Consensus 289 W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~--------~~~~~~yd~~~~~~~ 333 (375)
|..+.++.........+.++++|..++... +..+.+||.++.+..
T Consensus 410 ~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 410 WKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 998888875333334566788888877653 458999999987654
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=52.30 E-value=1.1e+02 Score=26.09 Aligned_cols=100 Identities=12% Similarity=-0.013 Sum_probs=53.4
Q ss_pred CceEEEEEECCC-ce--eeeecCCCCCCCccceeEE-e-cCeEEEEEecCCCcEEEEEEEcCc--e--eeEEEEECCCCC
Q 048294 230 GHKVVLSFDLGD-EV--YEEIQGPCLPQSVYVVMGL-Y-KECISLLVLKTIEFCFEIWTMKDK--E--WTKKLTVGPFEG 300 (375)
Q Consensus 230 ~~~~il~fDl~~-e~--~~~i~lP~~~~~~~~~l~~-~-~g~L~l~~~~~~~~~~~iW~l~~~--~--W~~~~~i~~~~~ 300 (375)
....|..+|+.+ .. ......+.... ...+.. - +|++.++.. .+..+.||.++.. . ......+.....
T Consensus 168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~--i~~i~~~~~~~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 243 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQ--IRDVALLPKEQEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEECSCSSC--EEEEEECSGGGCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCC
T ss_pred CCCeEEEEECCccccccceeeecCCCCc--eeEEEECCCCCCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccc
Confidence 345788889887 33 33332222211 122222 2 566655555 4678999998652 1 222222322111
Q ss_pred ---------ccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEE
Q 048294 301 ---------MFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMK 333 (375)
Q Consensus 301 ---------~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~ 333 (375)
...-+++.+++..++. ..++.+..||+++++..
T Consensus 244 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp CTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 1233455667775554 45788999999987654
No 86
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=51.62 E-value=1.2e+02 Score=26.13 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=63.8
Q ss_pred eEeCccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEE
Q 048294 214 VNLDGGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKK 292 (375)
Q Consensus 214 v~~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~ 292 (375)
.+.+|.+|--+. ..+...|..+|+.+.+. ..+++|..... .-+...+++|.++... +. .+|+.+-..-.++
T Consensus 49 ~~~~~~LyestG--~~g~S~v~~vD~~Tgkv~~~~~l~~~~Fg--eGit~~g~~ly~ltw~--~~--~v~v~D~~t~~~~ 120 (262)
T 3nol_A 49 FYRNGYFYESTG--LNGRSSIRKVDIESGKTLQQIELGKRYFG--EGISDWKDKIVGLTWK--NG--LGFVWNIRNLRQV 120 (262)
T ss_dssp EEETTEEEEEEE--ETTEEEEEEECTTTCCEEEEEECCTTCCE--EEEEEETTEEEEEESS--SS--EEEEEETTTCCEE
T ss_pred EEECCEEEEECC--CCCCceEEEEECCCCcEEEEEecCCccce--eEEEEeCCEEEEEEee--CC--EEEEEECccCcEE
Confidence 344666665442 12356899999999876 55677654311 1133457788777542 33 3455554333344
Q ss_pred EEECCCCCccccEEEeecCc-EEEEecCCeEEEEeCCCCcEE-EEEE
Q 048294 293 LTVGPFEGMFHPLGFWKTGG-FFAENQSNQMILYDPRTEEMK-NFGL 337 (375)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~~~-ll~~~~~~~~~~yd~~~~~~~-~v~~ 337 (375)
.+|.... ...++..+++ +++...++++..+|++|.+.. .+.+
T Consensus 121 ~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 121 RSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 4454321 2233445555 455555778999999985544 4554
No 87
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=51.34 E-value=1.2e+02 Score=26.18 Aligned_cols=111 Identities=9% Similarity=-0.058 Sum_probs=61.8
Q ss_pred ceEe-CccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceee
Q 048294 213 CVNL-DGGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWT 290 (375)
Q Consensus 213 ~v~~-~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~ 290 (375)
|+.. +|.+|--+ .....|..+|+++.+. ..+ +|..... .-+...+++|.++... +. .+|+.+-.+-.
T Consensus 59 GL~~~~~~Ly~st----G~~g~v~~iD~~Tgkv~~~~-l~~~~Fg--eGit~~g~~Ly~ltw~--~~--~v~V~D~~Tl~ 127 (268)
T 3nok_A 59 GLVFHQGHFFEST----GHQGTLRQLSLESAQPVWME-RLGNIFA--EGLASDGERLYQLTWT--EG--LLFTWSGMPPQ 127 (268)
T ss_dssp EEEEETTEEEEEE----TTTTEEEECCSSCSSCSEEE-ECTTCCE--EEEEECSSCEEEEESS--SC--EEEEEETTTTE
T ss_pred eEEEECCEEEEEc----CCCCEEEEEECCCCcEEeEE-CCCCcce--eEEEEeCCEEEEEEcc--CC--EEEEEECCcCc
Confidence 4443 45565544 3334599999999876 345 6653211 1133457777776542 32 45555543334
Q ss_pred EEEEECCCCCccccEEEeecCcE-EEEecCCeEEEEeCCCCcEE-EEEE
Q 048294 291 KKLTVGPFEGMFHPLGFWKTGGF-FAENQSNQMILYDPRTEEMK-NFGL 337 (375)
Q Consensus 291 ~~~~i~~~~~~~~~~~~~~~~~l-l~~~~~~~~~~yd~~~~~~~-~v~~ 337 (375)
++.+|... ....++..+++. ++...++++..+|++|.+.. .+.+
T Consensus 128 ~~~ti~~~---~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 128 RERTTRYS---GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEEECS---SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEeCC---CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 44445432 122344455555 45555788999999986555 4554
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=51.18 E-value=1.2e+02 Score=26.04 Aligned_cols=65 Identities=6% Similarity=-0.082 Sum_probs=38.6
Q ss_pred cCe-EEEEEecCCCcEEEEEEEcC-----------------ceeeEEEEECCCCCccccEEEeecCcEEE--EecCCeEE
Q 048294 264 KEC-ISLLVLKTIEFCFEIWTMKD-----------------KEWTKKLTVGPFEGMFHPLGFWKTGGFFA--ENQSNQMI 323 (375)
Q Consensus 264 ~g~-L~l~~~~~~~~~~~iW~l~~-----------------~~W~~~~~i~~~~~~~~~~~~~~~~~ll~--~~~~~~~~ 323 (375)
+|+ +.+.+. .+..+.||-++. .++.....+........-+.+.+++..++ ...++.+.
T Consensus 270 ~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAG--GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEE--TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred CCCcEEEEEe--CCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEE
Confidence 455 333333 467899999885 13445555443222223455667777655 34578899
Q ss_pred EEeCCCC
Q 048294 324 LYDPRTE 330 (375)
Q Consensus 324 ~yd~~~~ 330 (375)
.||+++.
T Consensus 348 iw~~~~~ 354 (357)
T 3i2n_A 348 VLIVTKL 354 (357)
T ss_dssp EEEECC-
T ss_pred EEECCCc
Confidence 9998764
No 89
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=50.69 E-value=1.3e+02 Score=26.58 Aligned_cols=96 Identities=7% Similarity=0.017 Sum_probs=50.6
Q ss_pred CceEEEEEECCCcee--eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEE------EECCCCC
Q 048294 230 GHKVVLSFDLGDEVY--EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKL------TVGPFEG 300 (375)
Q Consensus 230 ~~~~il~fDl~~e~~--~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~------~i~~~~~ 300 (375)
....|..+|+.+.+. ..+..... .....+...+|++.+.+. .+..+.||-+.. ..-.... .+.....
T Consensus 311 ~dg~i~vwd~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 311 ENGMLAQWDLRSPECPVGEFLINEG--TPINNVYFAAGALFVSSG--FDTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp TTSEEEEEETTCTTSCSEEEEESTT--SCEEEEEEETTEEEEEET--TTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred CCCeEEEEEcCCCcCchhhhhccCC--CCceEEEeCCCCEEEEec--CCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 456788899987542 33322111 111223334676544443 578899999887 1111111 1111111
Q ss_pred ccccEEEeecCc----EEEEecCCeEEEEeCCC
Q 048294 301 MFHPLGFWKTGG----FFAENQSNQMILYDPRT 329 (375)
Q Consensus 301 ~~~~~~~~~~~~----ll~~~~~~~~~~yd~~~ 329 (375)
...-+++..++. ++..-..+.+..|+++.
T Consensus 387 ~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 223345556665 66666677888899875
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=50.51 E-value=1.8e+02 Score=28.79 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=56.2
Q ss_pred ceEEEEEECCCceeeee-cCCCCCCCccceeEE-ec--CeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEE
Q 048294 231 HKVVLSFDLGDEVYEEI-QGPCLPQSVYVVMGL-YK--ECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLG 306 (375)
Q Consensus 231 ~~~il~fDl~~e~~~~i-~lP~~~~~~~~~l~~-~~--g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~ 306 (375)
...|..+|+.+++...+ .+..+.. ....+.. -+ |.+.+.+. .+..+.||-++...|.....+........-+.
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~-~V~~l~~s~~~~~~~l~s~s--~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~ 106 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEG-PVWRVDWAHPKFGTILASCS--YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQ 106 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSS-CEEEEEECCTTSCSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEE
T ss_pred CCcEEEEecCCCCCccceeccCCcC-ceEEEEecCCCCCCEEEEEe--CCCeEEEEECCCCcccccccccCCCCCeEEEE
Confidence 44666677765544433 2222211 1112221 22 66555555 46789999998877777776654333233445
Q ss_pred Eeec--CcEEE-EecCCeEEEEeCCCCc
Q 048294 307 FWKT--GGFFA-ENQSNQMILYDPRTEE 331 (375)
Q Consensus 307 ~~~~--~~ll~-~~~~~~~~~yd~~~~~ 331 (375)
+.++ +.+++ ...++.+..||++++.
T Consensus 107 ~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 107 WAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp ECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred ECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 5565 66655 4457889999998873
No 91
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=50.40 E-value=1.2e+02 Score=26.07 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=0.0
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCC-----------------ccceeEEe--cCeEEEEEecCCCc
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQS-----------------VYVVMGLY--KECISLLVLKTIEF 277 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~-----------------~~~~l~~~--~g~L~l~~~~~~~~ 277 (375)
+|.++|.. .....|..||..+.++..+..+..... ...-+..- +|.|.++.....
T Consensus 29 ~g~~l~v~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~-- 102 (322)
T 2fp8_A 29 TNKGFYTS----VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYH-- 102 (322)
T ss_dssp TCSSEEEE----CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTE--
T ss_pred CCCEEEEE----cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCC--
Q ss_pred EEEEEEEcC--ceeeEEEEECCCCCcccc--EEEee-cCcEEEEecC------------------CeEEEEeCCCCcEEE
Q 048294 278 CFEIWTMKD--KEWTKKLTVGPFEGMFHP--LGFWK-TGGFFAENQS------------------NQMILYDPRTEEMKN 334 (375)
Q Consensus 278 ~~~iW~l~~--~~W~~~~~i~~~~~~~~~--~~~~~-~~~ll~~~~~------------------~~~~~yd~~~~~~~~ 334 (375)
|++++. .................| +.+.+ +|.+++.... +.++.||+++++++.
T Consensus 103 ---i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 103 ---LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp ---EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred ---EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Q ss_pred E
Q 048294 335 F 335 (375)
Q Consensus 335 v 335 (375)
+
T Consensus 180 ~ 180 (322)
T 2fp8_A 180 L 180 (322)
T ss_dssp E
T ss_pred e
No 92
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=50.37 E-value=1.4e+02 Score=29.57 Aligned_cols=112 Identities=18% Similarity=0.144 Sum_probs=59.3
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCc--eeeee-cCCCCCC-----Cc-cceeEEecCeEEEEEecCCCcEEEEEE
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDE--VYEEI-QGPCLPQ-----SV-YVVMGLYKECISLLVLKTIEFCFEIWT 283 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e--~~~~i-~lP~~~~-----~~-~~~l~~~~g~L~l~~~~~~~~~~~iW~ 283 (375)
++..+|.+|... ....|.++|..+. .|+.- ..+.... .. ..-....+|++.+... +..+..+-
T Consensus 66 P~v~~g~vyv~~-----~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---dg~l~AlD 137 (689)
T 1yiq_A 66 PIVVDGVMYTTG-----PFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---DGRLEAID 137 (689)
T ss_dssp CEEETTEEEEEC-----GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEEEE
T ss_pred CEEECCEEEEEc-----CCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---CCEEEEEE
Confidence 788999999876 3567999998765 45431 2221100 00 0112234666554332 33333333
Q ss_pred EcC--ceeeEEEEECCCC--C-ccccEEEeecCcEEEEec------CCeEEEEeCCCCcEEE
Q 048294 284 MKD--KEWTKKLTVGPFE--G-MFHPLGFWKTGGFFAENQ------SNQMILYDPRTEEMKN 334 (375)
Q Consensus 284 l~~--~~W~~~~~i~~~~--~-~~~~~~~~~~~~ll~~~~------~~~~~~yd~~~~~~~~ 334 (375)
.+. ..|......+... . ...|+. .++.+++... ++.+++||.+|++..+
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 138 AKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp TTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 333 5677654212111 1 123432 3556655432 4689999999998765
No 93
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=50.22 E-value=1.3e+02 Score=26.31 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=35.1
Q ss_pred cCeEEEEEecCCCcEEEEEEEcCceeeEEE--EECCC--CCccccEEEeecCcEEEEecCCeEEEEeCCCCcEE
Q 048294 264 KECISLLVLKTIEFCFEIWTMKDKEWTKKL--TVGPF--EGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~--~i~~~--~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~ 333 (375)
+|+..+.+. .+..+.+|-++...-.... ..... ............+.+++...++.+..||.++++..
T Consensus 256 ~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 256 DGLHLLTVG--TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp TSSEEEEEE--TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred CCCEEEEec--CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 565555544 4667999998871111110 00000 01111111123356666777888999998876644
No 94
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=50.00 E-value=1.2e+02 Score=25.83 Aligned_cols=191 Identities=10% Similarity=-0.002 Sum_probs=94.0
Q ss_pred cceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEE
Q 048294 108 DGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAV 186 (375)
Q Consensus 108 nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (375)
.+.+.+.. .++.+.++|+.|++....-.... .. .++.+++..+ + ++... . . ...+.+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------~~-~~~~~s~dg~-~-l~~~~-~-~--------~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY---------DF-VDTAITSDCS-N-VVVTS-D-F--------CQTLVQ 66 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC---------CE-EEEEECSSSC-E-EEEEE-S-T--------TCEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC---------Cc-ceEEEcCCCC-E-EEEEe-C-C--------CCeEEE
Confidence 44444444 34679999999988754322211 11 2455555433 2 22221 1 1 237788
Q ss_pred EEcCCCCc--eeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCccceeE-E
Q 048294 187 YNLSTNSW--RYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMG-L 262 (375)
Q Consensus 187 yss~~~~W--r~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~-~ 262 (375)
++..++.- +.......+.. .- .+.-+|..-+... .......|..+|+.+.+.. .++..... ..+. .
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~----~~-~~s~dg~~l~~~~-~~~~~~~i~v~d~~~~~~~~~~~~~~~~----~~~~~s 136 (331)
T 3u4y_A 67 IETQLEPPKVVAIQEGQSSMA----DV-DITPDDQFAVTVT-GLNHPFNMQSYSFLKNKFISTIPIPYDA----VGIAIS 136 (331)
T ss_dssp EECSSSSCEEEEEEECSSCCC----CE-EECTTSSEEEECC-CSSSSCEEEEEETTTTEEEEEEECCTTE----EEEEEC
T ss_pred EECCCCceeEEecccCCCCcc----ce-EECCCCCEEEEec-CCCCcccEEEEECCCCCeEEEEECCCCc----cceEEC
Confidence 88887764 22211111110 01 2223455333331 1111228999999887653 33332211 1122 3
Q ss_pred ecCe-EEEEEecCCCcEEEEEEEcC-cee-eE-EEEECCCCCccccEEEeecCcE-EEEe-cCCeEEEEeCCCCcE
Q 048294 263 YKEC-ISLLVLKTIEFCFEIWTMKD-KEW-TK-KLTVGPFEGMFHPLGFWKTGGF-FAEN-QSNQMILYDPRTEEM 332 (375)
Q Consensus 263 ~~g~-L~l~~~~~~~~~~~iW~l~~-~~W-~~-~~~i~~~~~~~~~~~~~~~~~l-l~~~-~~~~~~~yd~~~~~~ 332 (375)
-+|+ |.+.... ....+.+|.++. ..- .. ...+.. .....-+.+.++|+. ++.. .++.+..||+++++.
T Consensus 137 pdg~~l~~~~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 137 PNGNGLILIDRS-SANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp TTSSCEEEEEET-TTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCCCEEEEEecC-CCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 3665 4444332 233399999886 221 11 122222 112344566778874 4444 367899999998774
No 95
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=49.58 E-value=1.5e+02 Score=26.73 Aligned_cols=103 Identities=10% Similarity=0.070 Sum_probs=54.8
Q ss_pred cceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEE
Q 048294 108 DGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVY 187 (375)
Q Consensus 108 nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vy 187 (375)
.+.|++..... +...++.+++...+-... ... .++.+|+..+. ++.. . . ..-.+..+
T Consensus 87 ~~~l~~~~~~~-I~~i~~~~~~~~~~~~~~---------~~~-~gl~~d~~~~~--ly~~-D-~--------~~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANRID-IRQVLPHRSEYTLLLNNL---------ENA-IALDFHHRREL--VFWS-D-V--------TLDRILRA 143 (386)
T ss_dssp CCEEEEECBSC-EEEECTTSCCCEEEECSC---------SCE-EEEEEETTTTE--EEEE-E-T--------TTTEEEEE
T ss_pred cceeEeecCcc-ceeeccCCCcEEEEecCC---------Ccc-EEEEEecCCCe--EEEE-e-C--------CCCcEEEE
Confidence 45565555544 777777665544332111 123 77888876543 2221 1 1 12366777
Q ss_pred EcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCce
Q 048294 188 NLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEV 243 (375)
Q Consensus 188 ss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~ 243 (375)
+..++..+.+.... . .... ++.+ +|.+||.. .....|..+|+....
T Consensus 144 ~~~g~~~~~~~~~~---~--~~p~-glavd~~~g~lY~~d----~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 144 NLNGSNVEEVVSTG---L--ESPG-GLAVDWVHDKLYWTD----SGTSRIEVANLDGAH 192 (386)
T ss_dssp ETTSCCEEEEECSS---C--SCCC-CEEEETTTTEEEEEE----TTTTEEEECBTTSCS
T ss_pred ecCCCCcEEEEeCC---C--CCcc-EEEEEeCCCeEEEEc----CCCCeEEEEeCCCCc
Confidence 77766544432110 0 0111 3333 68999987 345688889887654
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=48.92 E-value=1.3e+02 Score=25.83 Aligned_cols=70 Identities=9% Similarity=0.044 Sum_probs=41.9
Q ss_pred CeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEEEE
Q 048294 265 ECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 265 g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~v~ 336 (375)
|++.+.+. .+..+.||-++.........+......-.-+.+.+++..++. ..++.+..||+++++...+.
T Consensus 54 g~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 124 (368)
T 3mmy_A 54 GNFLIAGS--WANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIA 124 (368)
T ss_dssp SEEEEEEE--TTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEEEC--CCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeec
Confidence 46555554 467899999986222222222211122233455667776554 45788999999998876643
No 97
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=48.44 E-value=1.3e+02 Score=25.95 Aligned_cols=190 Identities=9% Similarity=0.117 Sum_probs=86.7
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCC--cee
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNS--WRY 196 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~--Wr~ 196 (375)
+++++++.|++....-.... .... .++.+|+... ++ +... ..-.+.+|+..+.. =..
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~-------~~~p-~gia~d~~g~---l~-v~d~---------~~~~v~~~~~~g~~~~~~~ 128 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL-------FYLP-HGLSIDTDGN---YW-VTDV---------ALHQVFKLDPHSKEGPLLI 128 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT-------CSSE-EEEEECTTSC---EE-EEET---------TTTEEEEECTTCSSCCSEE
T ss_pred cEEEEECCCCeEEeccCCCc-------cCCc-eEEEECCCCC---EE-EEEC---------CCCEEEEEeCCCCeEEEEE
Confidence 59999999888754221110 1122 6777776543 22 2211 12367777765441 122
Q ss_pred ecccCCc---ccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCC------CCccc-eeE-E
Q 048294 197 FESFKSS---HYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLP------QSVYV-VMG-L 262 (375)
Q Consensus 197 ~~~~~~~---~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~------~~~~~-~l~-~ 262 (375)
+.....+ ........ ++.+ +|.+|+... .....|..||...+....+..+... ..... -+. .
T Consensus 129 ~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~---~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d 204 (329)
T 3fvz_A 129 LGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDG---YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALV 204 (329)
T ss_dssp ESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEEC---SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEE
T ss_pred ecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeC---CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEE
Confidence 2211000 00001111 4444 588888661 1467899999665544444322111 00111 122 2
Q ss_pred ec-CeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEee------cCcEEEEe-cCCeEEEEeCCCCcEEE
Q 048294 263 YK-ECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWK------TGGFFAEN-QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 263 ~~-g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~------~~~ll~~~-~~~~~~~yd~~~~~~~~ 334 (375)
-+ |.|.+... ....+.+|-.+...................+.+.+ +|.+++.. ....+..+|.+++++..
T Consensus 205 ~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~ 282 (329)
T 3fvz_A 205 PHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIID 282 (329)
T ss_dssp TTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEE
T ss_pred CCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEE
Confidence 24 77766654 45678888776433332222111111111122222 23322211 13468888877776554
Q ss_pred E
Q 048294 335 F 335 (375)
Q Consensus 335 v 335 (375)
.
T Consensus 283 ~ 283 (329)
T 3fvz_A 283 V 283 (329)
T ss_dssp E
T ss_pred E
Confidence 3
No 98
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=48.36 E-value=1.3e+02 Score=25.70 Aligned_cols=109 Identities=6% Similarity=-0.101 Sum_probs=56.9
Q ss_pred CccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTV 295 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 295 (375)
+|.+|... .....|..+|+.+.+. ..++++..... ......-+|+..++... ....+.+|-++...-.....+
T Consensus 10 ~~~~~v~~----~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 10 GHEYMIVT----NYPNNLHVVDVASDTVYKSCVMPDKFGP-GTAMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TCEEEEEE----ETTTEEEEEETTTTEEEEEEECSSCCSS-CEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEES
T ss_pred CCEEEEEe----CCCCeEEEEECCCCcEEEEEecCCCCCC-ceeEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEEEEEc
Confidence 44544443 2456889999988765 34566541111 11111235664444432 456677777665332222222
Q ss_pred CCC----CCccccEEEeecCcEEEEec-------------CCeEEEEeCCCCc
Q 048294 296 GPF----EGMFHPLGFWKTGGFFAENQ-------------SNQMILYDPRTEE 331 (375)
Q Consensus 296 ~~~----~~~~~~~~~~~~~~ll~~~~-------------~~~~~~yd~~~~~ 331 (375)
... ......+.+.++|+.++... .+.+..||+++++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 210 00123455667777655433 3789999998743
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=46.37 E-value=1.3e+02 Score=25.29 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=0.0
Q ss_pred CccEEEeeeeccCCceEEEEEECC--CceeeeecCCCCCCCccceeEEec---CeEEEEEecCCCcEEEEEEEcC-----
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLG--DEVYEEIQGPCLPQSVYVVMGLYK---ECISLLVLKTIEFCFEIWTMKD----- 286 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~--~e~~~~i~lP~~~~~~~~~l~~~~---g~L~l~~~~~~~~~~~iW~l~~----- 286 (375)
+|..-..+ .....|..+|+. ...+..+..-.........+.... |++.+.+. .+..+.||-++.
T Consensus 22 ~~~~l~~~----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~--~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 22 YGRHVATC----SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS--YDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp SSSEEEEE----ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE--TTSCEEEEEECTTSCTT
T ss_pred CCCEEEEe----eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc--CCCeEEEEecCCCcccc
Q ss_pred --ceeeEEEEECCCCCccccEEEeec--CcEEEEec-CCeEEEEeCCCCc
Q 048294 287 --KEWTKKLTVGPFEGMFHPLGFWKT--GGFFAENQ-SNQMILYDPRTEE 331 (375)
Q Consensus 287 --~~W~~~~~i~~~~~~~~~~~~~~~--~~ll~~~~-~~~~~~yd~~~~~ 331 (375)
..|.....+........-+.+.++ +..++... ++.+..||+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=46.16 E-value=1.4e+02 Score=25.55 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=37.1
Q ss_pred CeEEEEEecCCCcEEEEEEEcC-c-eeeEEEEECCC--CCccccEEEeecCcEEEE-ecCCeEEEEeCCC
Q 048294 265 ECISLLVLKTIEFCFEIWTMKD-K-EWTKKLTVGPF--EGMFHPLGFWKTGGFFAE-NQSNQMILYDPRT 329 (375)
Q Consensus 265 g~L~l~~~~~~~~~~~iW~l~~-~-~W~~~~~i~~~--~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~ 329 (375)
|++.+... .+..+.||-++. . .......+... .....-+++.+++..++. ..++.+..||+.+
T Consensus 299 ~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGN--QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEEC--TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEe--cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 66655554 467899999987 2 22233344432 122234556677877664 4578899999864
No 101
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=44.60 E-value=1.6e+02 Score=25.58 Aligned_cols=102 Identities=6% Similarity=0.019 Sum_probs=56.5
Q ss_pred ccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcC--ceeeEEEE
Q 048294 218 GGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKD--KEWTKKLT 294 (375)
Q Consensus 218 G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~ 294 (375)
|.+||... ....|..+|..+.+...+..|... ..+. .-+|++.+... .. |++++. ........
T Consensus 61 ~~l~~~d~----~~~~i~~~d~~~~~~~~~~~~~~v----~~i~~~~dg~l~v~~~----~g--l~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 61 GTAWWFNI----LERELHELHLASGRKTVHALPFMG----SALAKISDSKQLIASD----DG--LFLRDTATGVLTLHAE 126 (326)
T ss_dssp TEEEEEEG----GGTEEEEEETTTTEEEEEECSSCE----EEEEEEETTEEEEEET----TE--EEEEETTTCCEEEEEC
T ss_pred CEEEEEEC----CCCEEEEEECCCCcEEEEECCCcc----eEEEEeCCCeEEEEEC----CC--EEEEECCCCcEEEEee
Confidence 78999872 356899999998887776665321 1122 35788766541 23 445443 44433222
Q ss_pred ECCCCCc--cccEEEeecCcEEEEec-------CCeEEEEeCCCCcEEEE
Q 048294 295 VGPFEGM--FHPLGFWKTGGFFAENQ-------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 295 i~~~~~~--~~~~~~~~~~~ll~~~~-------~~~~~~yd~~~~~~~~v 335 (375)
....... ..-+.+.++|.+++... ...++.|| +++++.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 1111111 12244556778776543 25788888 5666554
No 102
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=44.57 E-value=1.4e+02 Score=24.88 Aligned_cols=193 Identities=8% Similarity=-0.013 Sum_probs=91.2
Q ss_pred eecceEEEeeC-CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILGN-DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
..+|.|.+.+. .+.+.++++.++....+-.... ... .++.+|+..+. +.. .. .. ...+
T Consensus 45 ~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--------~~p-~~ia~d~~~~~--lyv-~d-~~--------~~~I 103 (267)
T 1npe_A 45 CVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL--------GSP-EGIALDHLGRT--IFW-TD-SQ--------LDRI 103 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC--------CCE-EEEEEETTTTE--EEE-EE-TT--------TTEE
T ss_pred cCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC--------CCc-cEEEEEecCCe--EEE-EE-CC--------CCEE
Confidence 34566666553 4568888887765433221111 122 56677765432 221 11 11 3367
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG 261 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~ 261 (375)
.+++.....-+.+... .. .... ++.+ +|.+||.... .....|..+++.......+.. ..... ..-+.
T Consensus 104 ~~~~~~g~~~~~~~~~--~~---~~P~-~i~vd~~~g~lyv~~~~--~~~~~I~~~~~dg~~~~~~~~-~~~~~-P~gia 173 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDT--GL---VNPR-GIVTDPVRGNLYWTDWN--RDNPKIETSHMDGTNRRILAQ-DNLGL-PNGLT 173 (267)
T ss_dssp EEEETTSCSCEEEECS--SC---SSEE-EEEEETTTTEEEEEECC--SSSCEEEEEETTSCCCEEEEC-TTCSC-EEEEE
T ss_pred EEEEcCCCCEEEEEEC--CC---CCcc-EEEEeeCCCEEEEEECC--CCCcEEEEEecCCCCcEEEEE-CCCCC-CcEEE
Confidence 7777765432222111 00 1112 4443 6899998721 124678888887654443321 11111 11122
Q ss_pred -Ee-cCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeec-CcEEEEec-CCeEEEEeCCCCcEE-EE
Q 048294 262 -LY-KECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKT-GGFFAENQ-SNQMILYDPRTEEMK-NF 335 (375)
Q Consensus 262 -~~-~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~-~~ll~~~~-~~~~~~yd~~~~~~~-~v 335 (375)
.. ++.|++.... ... |++++- ..- ....+. ....|.++..+ +.+++... .+++..+|+++++.. .+
T Consensus 174 ~d~~~~~lyv~d~~--~~~--I~~~~~~g~~-~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 174 FDAFSSQLCWVDAG--THR--AECLNPAQPG-RRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp EETTTTEEEEEETT--TTE--EEEEETTEEE-EEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EcCCCCEEEEEECC--CCE--EEEEecCCCc-eEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEE
Confidence 22 4566655442 333 444443 111 111111 22345555434 45555543 578999999876644 44
Q ss_pred EE
Q 048294 336 GL 337 (375)
Q Consensus 336 ~~ 337 (375)
..
T Consensus 246 ~~ 247 (267)
T 1npe_A 246 HP 247 (267)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 103
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=44.48 E-value=2.4e+02 Score=27.65 Aligned_cols=112 Identities=7% Similarity=0.092 Sum_probs=56.6
Q ss_pred CccEEEeeeeccCCceEEEEEECCCce---eeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEV---YEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKK 292 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~---~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~ 292 (375)
++.+|+++.. ......|+..|+.+.. |+.+ .|..... . .+...++.|.+.... ...-.|++++- ..+.+.
T Consensus 291 g~~l~~~t~~-~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~-~-~~s~~g~~lv~~~~~--~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 291 GSTLYLLTNR-DAPNRRLVTVDAANPGPAHWRDL-IPERQQV-L-TVHSGSGYLFAEYMV--DATARVEQFDYEGKRVRE 364 (693)
T ss_dssp TTEEEEEECT-TCTTCEEEEEETTSCCGGGCEEE-ECCCSSC-E-EEEEETTEEEEEEEE--TTEEEEEEECTTSCEEEE
T ss_pred CCEEEEEECC-CCCCCEEEEEeCCCCCccccEEE-ecCCCCE-E-EEEEECCEEEEEEEE--CCeeEEEEEECCCCeeEE
Confidence 5677777632 2235789999998743 5543 2222211 1 233345566555543 33334444443 333332
Q ss_pred EEECCCC-CccccEEEeec-CcEEEEecC----CeEEEEeCCCCcEEEEE
Q 048294 293 LTVGPFE-GMFHPLGFWKT-GGFFAENQS----NQMILYDPRTEEMKNFG 336 (375)
Q Consensus 293 ~~i~~~~-~~~~~~~~~~~-~~ll~~~~~----~~~~~yd~~~~~~~~v~ 336 (375)
+.... .....+....+ +.+++...+ ..++.||+++++.+.+.
T Consensus 365 --l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 365 --VALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp --ECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred --eecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 33211 11111111223 455555443 78999999998877664
No 104
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=43.99 E-value=26 Score=25.92 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=28.2
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEE
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIF 168 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (375)
.+++.+|.|++|. |..... .... +.+..|...+.|+|+...
T Consensus 12 ~V~~~d~~~~~W~--p~~~~~------g~s~-V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 12 AVMVYDDANKKWV--PAGGST------GFSR-VHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEETTTTEEE--EGGGCC------SCEE-EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCceE--ECCCCC------CceE-EEEEEECCCCEEEEEEEE
Confidence 4889999999664 433210 1123 788889888899998764
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=43.83 E-value=1.7e+02 Score=25.87 Aligned_cols=204 Identities=10% Similarity=-0.003 Sum_probs=99.0
Q ss_pred cc-eEEEeeCCCeEEEEcccccceeccC-CCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 108 DG-IFCILGNDNRLTLWNPANKEYRHVP-KCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 108 nG-Ll~~~~~~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
+| +|+....++.+.|||..+++...-. .+.... .........+.+.+....+ ++. .. . .-.+.
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~-l~s-~~--~--------dg~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL---EGHTKRVGIVAWHPTAQNV-LLS-AG--C--------DNVIL 157 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE---ECCSSCEEEEEECSSBTTE-EEE-EE--T--------TSCEE
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe---cCCCCeEEEEEECcCCCCE-EEE-Ec--C--------CCEEE
Confidence 45 4444445677999998887543211 010000 0001112555666654332 221 11 1 23688
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeee-e-cCCCCCCCccceeE
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEE-I-QGPCLPQSVYVVMG 261 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i-~lP~~~~~~~~~l~ 261 (375)
+++..++.....-... .+.. .-. ++.. +|.....+ .....|..+|+.+.+... + ........ ....-
T Consensus 158 iwd~~~~~~~~~~~~~-~~~~--~v~-~~~~~~~~~~l~~~----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~ 228 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPD-VHPD--TIY-SVDWSRDGALICTS----CRDKRVRVIEPRKGTVVAEKDRPHEGTRP-VHAVF 228 (402)
T ss_dssp EEETTTTEEEEEECTT-TCCS--CEE-EEEECTTSSCEEEE----ETTSEEEEEETTTTEEEEEEECSSCSSSC-CEEEE
T ss_pred EEECCCCCccEEEecC-CCCC--ceE-EEEECCCCCEEEEE----ecCCcEEEEeCCCCceeeeeccCCCCCcc-eEEEE
Confidence 8998877543221000 0100 000 2222 45444333 245678889998876432 2 22221101 11111
Q ss_pred EecCeEEEEEec-CCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEEe--cCCeEEEEeCCCCc--EEEE
Q 048294 262 LYKECISLLVLK-TIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN--QSNQMILYDPRTEE--MKNF 335 (375)
Q Consensus 262 ~~~g~L~l~~~~-~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~--~~~~~~~yd~~~~~--~~~v 335 (375)
.-+|++.++... ..+..+.||-++. ..=.....+..... ...+.+.+++..++.. .++.+.+||+++++ +..+
T Consensus 229 ~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l 307 (402)
T 2aq5_A 229 VSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG-VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYL 307 (402)
T ss_dssp CSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS-CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEE
T ss_pred cCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc-eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEee
Confidence 336776555531 2577899998876 32122233332222 2334556777776543 37889999999887 6655
Q ss_pred E
Q 048294 336 G 336 (375)
Q Consensus 336 ~ 336 (375)
.
T Consensus 308 ~ 308 (402)
T 2aq5_A 308 S 308 (402)
T ss_dssp E
T ss_pred c
Confidence 4
No 106
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=43.74 E-value=1.3e+02 Score=25.75 Aligned_cols=110 Identities=5% Similarity=-0.092 Sum_probs=57.0
Q ss_pred Ccc-EEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEE-
Q 048294 217 DGG-CYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLT- 294 (375)
Q Consensus 217 ~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~- 294 (375)
+|. +||.. .....|..+|.. .+.+.+..|.... ......-+|+|.+... ....+.+|-.+ .+......
T Consensus 55 ~g~~l~~~d----~~~~~i~~~~~~-g~~~~~~~~~~~~--~gl~~d~dG~l~v~~~--~~~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 55 AQRTLVWSD----LVGRRVLGWRED-GTVDVLLDATAFT--NGNAVDAQQRLVHCEH--GRRAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp GGTEEEEEE----TTTTEEEEEETT-SCEEEEEESCSCE--EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECE
T ss_pred CCCEEEEEE----CCCCEEEEEeCC-CCEEEEeCCCCcc--ceeeECCCCCEEEEEC--CCCEEEEECCC-CCEEEEEec
Confidence 454 89987 345678899984 4455554433221 1111134677654432 23445544433 33222211
Q ss_pred ECCC-CCccccEEEeecCcEEEEe------------------cCCeEEEEeCCCCcEEEEE
Q 048294 295 VGPF-EGMFHPLGFWKTGGFFAEN------------------QSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 295 i~~~-~~~~~~~~~~~~~~ll~~~------------------~~~~~~~yd~~~~~~~~v~ 336 (375)
.... .....-+.+.++|.+++.. ....++.||+++++++.+.
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 1100 0011235566788887742 1357999999888887654
No 107
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=43.69 E-value=2.6e+02 Score=27.85 Aligned_cols=203 Identities=8% Similarity=0.026 Sum_probs=94.9
Q ss_pred ecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEE
Q 048294 107 YDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAV 186 (375)
Q Consensus 107 ~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (375)
.+|-|.+....+ ++++||.++++..+...+..... ........+..|.... +.+... .-.+..
T Consensus 272 ~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~--l~~~~i~~i~~D~~g~----lWigt~----------~~Gl~~ 334 (795)
T 4a2l_A 272 SQNRLWIGTFND-LNIYHEGTDSFASYSSNPVENGS--LSQRSVRSIFMDSQGG----MWLGTY----------FGGLNY 334 (795)
T ss_dssp TTSCEEEEESSC-EEEEETTTTEEEEECCCTTSTTS--CSSSCEEEEEECTTSC----EEEEES----------SSCEEE
T ss_pred CCCCEEEEeCCh-hheEcCCCCeEEEEecCCCCCCC--CCCCcEEEEEEeCCcC----EEEEEC----------CCCeEE
Confidence 466666665544 78888888877766543221000 0111114444454322 333321 124555
Q ss_pred EEcCCCCceeecccCCccccc-CCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCC-----CCCcc-
Q 048294 187 YNLSTNSWRYFESFKSSHYHM-PWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCL-----PQSVY- 257 (375)
Q Consensus 187 yss~~~~Wr~~~~~~~~~~~~-~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~-----~~~~~- 257 (375)
|+..++.++............ ..-. +++. +|. -|+.. ....|..+|..+.+|..+..+.. .....
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~~V~-~i~~d~~g~-lWiGt----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 408 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSDNVVS-CIVEDKDKN-LWIGT----NDGGLNLYNPITQRFTSYTLQEDESARGIGSNNI 408 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSCSSEE-EEEECTTSC-EEEEE----SSSCEEEECTTTCCEEEECCC------CCSCSCE
T ss_pred eCCCcccceEEcCCCCCCCCCCCeeE-EEEECCCCC-EEEEE----CCCCeEEEcCCCCcEEEEecCCCCcccCCCCccE
Confidence 666666555443221111000 0001 3333 344 45552 34578999999999988754331 11111
Q ss_pred ceeE-EecCe-EEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEE--eecCcEEEEecCCeEEEEeCCCCcEE
Q 048294 258 VVMG-LYKEC-ISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGF--WKTGGFFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 258 ~~l~-~~~g~-L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~--~~~~~ll~~~~~~~~~~yd~~~~~~~ 333 (375)
..+. ..+|. |.+... ...+..+-.+...+.........-....+.++ .++|.+++... ..++.||+++++++
T Consensus 409 ~~i~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 409 KAVYVDEKKSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFT 484 (795)
T ss_dssp EEEEEETTTTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEE
T ss_pred EEEEEcCCCCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEE
Confidence 1122 34676 655432 23343333332322221100110001122333 34577877765 67999999998887
Q ss_pred EEE
Q 048294 334 NFG 336 (375)
Q Consensus 334 ~v~ 336 (375)
.+.
T Consensus 485 ~~~ 487 (795)
T 4a2l_A 485 TIE 487 (795)
T ss_dssp ECC
T ss_pred Ecc
Confidence 653
No 108
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=42.76 E-value=1.8e+02 Score=25.80 Aligned_cols=100 Identities=6% Similarity=0.052 Sum_probs=56.3
Q ss_pred ceEEEEEECCCceee-eecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEe
Q 048294 231 HKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFW 308 (375)
Q Consensus 231 ~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~ 308 (375)
...|..+|+.+.+.. .+..+.. ...+. .-+|+..++.....+..+.||-++.....+...+........-+.+.
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQ----VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSC----EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCEEEEEECCCCCEEEEEeCCCc----EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 557777888766542 2332211 11121 23566555543335788999999886666665554322222345566
Q ss_pred ecCcEEEEe-cCCeEEEEeCCCCcEEE
Q 048294 309 KTGGFFAEN-QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 309 ~~~~ll~~~-~~~~~~~yd~~~~~~~~ 334 (375)
+++..++.. .++.+..||+.+++...
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC-----
T ss_pred CCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 778776654 47889999998876543
No 109
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=42.25 E-value=2.6e+02 Score=27.57 Aligned_cols=109 Identities=12% Similarity=0.043 Sum_probs=51.8
Q ss_pred ceEe---CccEEEeeeeccCCceEEEEEECCCceeeee-----cCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEE
Q 048294 213 CVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEI-----QGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTM 284 (375)
Q Consensus 213 ~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-----~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l 284 (375)
++.+ +|.|||... .....|..+++....-..+ ..|.... +...+++|+++-. ....|...-+
T Consensus 500 giavDp~~g~ly~td~---~~~~~I~~~~~dG~~~~~l~~~~l~~PnGla-----vd~~~~~LY~aD~--~~~~I~~~d~ 569 (699)
T 1n7d_A 500 AIVVDPVHGFMYWTDW---GTPAKIKKGGLNGVDIYSLVTENIQWPNGIT-----LDLLSGRLYWVDS--KLHSISSIDV 569 (699)
T ss_dssp CEECCSSSSCCEECCC---SSSCCEEBCCSSSCCCCEESCSSCSSCCCEE-----ECTTTCCEEEEET--TTTEEEEECS
T ss_pred eEEEccCCCcEEEccc---CCCCeEEEEeCCCCCeeEEEeCCCCCccEEE-----EeccCCEEEEEec--CCCeEEEEcc
Confidence 4554 689999762 2235788888765433222 1222211 1112566666543 2333333333
Q ss_pred cCceeeEEEEEC-CCCCccccEEEeec-CcEEEEec-CCeEEEEeCCCCcEEE
Q 048294 285 KDKEWTKKLTVG-PFEGMFHPLGFWKT-GGFFAENQ-SNQMILYDPRTEEMKN 334 (375)
Q Consensus 285 ~~~~W~~~~~i~-~~~~~~~~~~~~~~-~~ll~~~~-~~~~~~yd~~~~~~~~ 334 (375)
+... +..+. ....+..|.++.-+ +.+++... .+.|..+|..+++..+
T Consensus 570 dG~~---~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 570 NGGN---RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp SSSC---CEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEE
T ss_pred CCCc---eEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceE
Confidence 3211 11111 11123344444323 34555443 5689999987766544
No 110
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=42.04 E-value=2.6e+02 Score=27.46 Aligned_cols=192 Identities=13% Similarity=0.132 Sum_probs=92.2
Q ss_pred eecc-eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDG-IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nG-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
+.+| +|.....++.+.|||..|++....-.... ... ..+.+.+... + ++ ... . .-.+
T Consensus 64 s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--------~~v-~~~~~s~~~~-~-l~-~~~--~--------dg~i 121 (814)
T 3mkq_A 64 IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--------DYI-RSIAVHPTKP-Y-VL-SGS--D--------DLTV 121 (814)
T ss_dssp EGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS--------SCE-EEEEECSSSS-E-EE-EEE--T--------TSEE
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC--------CCE-EEEEEeCCCC-E-EE-EEc--C--------CCEE
Confidence 3355 44444556779999998887543221111 011 4555555432 2 22 221 1 2377
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCcccee
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVM 260 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l 260 (375)
.+|+..++ |....... .+. ..-. ++.. +|.....+ .....|..+|+.+.+... +..+.... ...+
T Consensus 122 ~vw~~~~~-~~~~~~~~-~~~--~~v~-~~~~~p~~~~~l~~~----~~dg~v~vwd~~~~~~~~~~~~~~~~~--v~~~ 190 (814)
T 3mkq_A 122 KLWNWENN-WALEQTFE-GHE--HFVM-CVAFNPKDPSTFASG----CLDRTVKVWSLGQSTPNFTLTTGQERG--VNYV 190 (814)
T ss_dssp EEEEGGGT-SEEEEEEE-CCS--SCEE-EEEEETTEEEEEEEE----ETTSEEEEEETTCSSCSEEEECCCTTC--CCEE
T ss_pred EEEECCCC-ceEEEEEc-CCC--CcEE-EEEEEcCCCCEEEEE----eCCCeEEEEECCCCcceeEEecCCCCC--EEEE
Confidence 88888765 22111110 000 0001 2222 34333333 234578888887654322 22221111 1112
Q ss_pred EE-e--cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEe-cCCeEEEEeCCCCcEEE
Q 048294 261 GL-Y--KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN-QSNQMILYDPRTEEMKN 334 (375)
Q Consensus 261 ~~-~--~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~-~~~~~~~yd~~~~~~~~ 334 (375)
.. - +|.+.+++. .+..+.+|-++...- ...+.........+.+.+++.+++.. .++.+..||+.+++...
T Consensus 191 ~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 191 DYYPLPDKPYMITAS--DDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp EECCSTTCCEEEEEC--TTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEEECCCCCEEEEEe--CCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 21 1 566555444 467899998776221 22222211222344556777765544 46889999998866543
No 111
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=41.48 E-value=1.8e+02 Score=25.30 Aligned_cols=62 Identities=11% Similarity=0.212 Sum_probs=39.3
Q ss_pred cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeC
Q 048294 264 KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDP 327 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~ 327 (375)
+|++.+... .+..+.||-++...|.....+..-...-.-+.+.++|..|+. ..++.+..||.
T Consensus 161 ~~~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 555544444 467899999888778776666533222234556677776554 34677888874
No 112
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=39.85 E-value=1.7e+02 Score=24.64 Aligned_cols=187 Identities=16% Similarity=0.170 Sum_probs=92.0
Q ss_pred cc-eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEE
Q 048294 108 DG-IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAV 186 (375)
Q Consensus 108 nG-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~v 186 (375)
+| +++....++.+.+||..+++.......... . .....+.+.+.. .+ + .... . .-.+.+
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~-~~i~~~~~~~~~-~~-l-~~~~--~--------dg~v~~ 167 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS------A-PACYALAISPDS-KV-C-FSCC--S--------DGNIAV 167 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEECS------S-SCEEEEEECTTS-SE-E-EEEE--T--------TSCEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeecccC------C-CceEEEEECCCC-CE-E-EEEe--C--------CCcEEE
Confidence 45 344444556799999988763322111110 0 111455555532 22 2 2221 1 236788
Q ss_pred EEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCccceeE-E
Q 048294 187 YNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMG-L 262 (375)
Q Consensus 187 yss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~-~ 262 (375)
|+..++.-...-.. +. ..-. ++.+ +|...... .....|..+|+.+.+.. .+..+... ..+. .
T Consensus 168 ~d~~~~~~~~~~~~---~~--~~i~-~~~~~~~~~~l~~~----~~dg~i~~~d~~~~~~~~~~~~~~~v----~~~~~s 233 (337)
T 1gxr_A 168 WDLHNQTLVRQFQG---HT--DGAS-CIDISNDGTKLWTG----GLDNTVRSWDLREGRQLQQHDFTSQI----FSLGYC 233 (337)
T ss_dssp EETTTTEEEEEECC---CS--SCEE-EEEECTTSSEEEEE----ETTSEEEEEETTTTEEEEEEECSSCE----EEEEEC
T ss_pred EeCCCCceeeeeec---cc--CceE-EEEECCCCCEEEEE----ecCCcEEEEECCCCceEeeecCCCce----EEEEEC
Confidence 88887643221110 00 0000 2222 45444443 24567888998876543 23322211 1121 2
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~ 334 (375)
-+|+..++.. .+..+.+|-++. .. ..+........-+.+.+++..++. ..++.+..||+++++...
T Consensus 234 ~~~~~l~~~~--~~~~i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 234 PTGEWLAVGM--ESSNVEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TTSSEEEEEE--TTSCEEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEc--CCCcEEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEE
Confidence 3565555544 456799998887 32 122221222234455667776554 457889999999887653
No 113
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=39.72 E-value=2.9e+02 Score=27.36 Aligned_cols=111 Identities=12% Similarity=-0.013 Sum_probs=53.9
Q ss_pred ceEeC--ccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcc-ceeE-EecCeEEEEEecCCCcEEEEEEEcC--
Q 048294 213 CVNLD--GGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVY-VVMG-LYKECISLLVLKTIEFCFEIWTMKD-- 286 (375)
Q Consensus 213 ~v~~~--G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~-~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~-- 286 (375)
+++.+ |.+ |+.. ....|..||..+.++..+..|....... ..+. ..+|.|.+... .. .|..++.
T Consensus 367 ~i~~d~~g~l-Wigt----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~---~~--Gl~~~~~~~ 436 (781)
T 3v9f_A 367 SVCDDGQGKL-WIGT----DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTY---LG--NISYYNTRL 436 (781)
T ss_dssp EEEECTTSCE-EEEE----BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEET---TE--EEEEECSSS
T ss_pred EEEEcCCCCE-EEEe----CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEec---cC--CEEEEcCCC
Confidence 44443 554 5552 2456889999988887663222211111 1121 23566665432 12 2344443
Q ss_pred ceeeEEEEECCCCCccccEEE--eecCcEEEEecCCeEEEEeCCCCcEEEEE
Q 048294 287 KEWTKKLTVGPFEGMFHPLGF--WKTGGFFAENQSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~--~~~~~ll~~~~~~~~~~yd~~~~~~~~v~ 336 (375)
..+.... .... ....+.++ .++|.+++... ..++.||+++++++.+.
T Consensus 437 ~~~~~~~-~~~~-~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 437 KKFQIIE-LEKN-ELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp CEEEECC-STTT-CCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEE
T ss_pred CcEEEec-cCCC-CCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecc
Confidence 3332211 1000 11122333 33466766655 78999999988776553
No 114
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=38.34 E-value=1.8e+02 Score=24.48 Aligned_cols=197 Identities=11% Similarity=0.108 Sum_probs=94.9
Q ss_pred eeecceEEEeeCCCeEEEEcccccceeccC-CCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCce
Q 048294 105 GPYDGIFCILGNDNRLTLWNPANKEYRHVP-KCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQ 183 (375)
Q Consensus 105 ~s~nGLl~~~~~~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~ 183 (375)
-+.+|-+++..+++.+.|||..+++....- ...... .. .....+.+.+.. .+ +.... . .-.
T Consensus 59 ~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~-~~v~~~~~~~~~-~~--l~~~~--~--------d~~ 120 (337)
T 1gxr_A 59 ISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLN----RD-NYIRSCKLLPDG-CT--LIVGG--E--------AST 120 (337)
T ss_dssp ECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSC----TT-SBEEEEEECTTS-SE--EEEEE--S--------SSE
T ss_pred EecCCcEEEEcCCCeEEEEECCCCCceeeeecccccC----CC-CcEEEEEEcCCC-CE--EEEEc--C--------CCc
Confidence 344565555444667999998876532111 100000 01 112555666633 22 22221 1 237
Q ss_pred EEEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCcccee
Q 048294 184 TAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVM 260 (375)
Q Consensus 184 ~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l 260 (375)
+.+|+..++..+......... ..-. .+.+ +|...... .....|..+|+.+.+... +..... ....+
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~---~~i~-~~~~~~~~~~l~~~----~~dg~v~~~d~~~~~~~~~~~~~~~---~i~~~ 189 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSA---PACY-ALAISPDSKVCFSC----CSDGNIAVWDLHNQTLVRQFQGHTD---GASCI 189 (337)
T ss_dssp EEEEECCCC--EEEEEEECSS---SCEE-EEEECTTSSEEEEE----ETTSCEEEEETTTTEEEEEECCCSS---CEEEE
T ss_pred EEEEECCCCCcceeeecccCC---CceE-EEEECCCCCEEEEE----eCCCcEEEEeCCCCceeeeeecccC---ceEEE
Confidence 889999887754332211000 0000 1111 44443333 234567888888765432 322111 11112
Q ss_pred E-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEEE
Q 048294 261 G-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 261 ~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~v 335 (375)
. .-+|+..+.+. .+..+.+|-++...-... +... ....-+.+.+++..++. ..++.+..||+++++...+
T Consensus 190 ~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~--~~~~-~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 190 DISNDGTKLWTGG--LDNTVRSWDLREGRQLQQ--HDFT-SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EECTTSSEEEEEE--TTSEEEEEETTTTEEEEE--EECS-SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred EECCCCCEEEEEe--cCCcEEEEECCCCceEee--ecCC-CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 2 22565555554 467899998876221222 2221 11233455567776554 4578899999998876554
No 115
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=38.09 E-value=2.4e+02 Score=25.83 Aligned_cols=109 Identities=9% Similarity=-0.005 Sum_probs=60.0
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCe-EEEEEecCCC-cEEEEEEEcCceeeEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKEC-ISLLVLKTIE-FCFEIWTMKDKEWTKKL 293 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~~~~~~-~~~~iW~l~~~~W~~~~ 293 (375)
+|.||+... . ..|..||+.+.+...+..+ .. ....+. ..+|+ |.+....... ....+|...+..|....
T Consensus 149 ~g~Lyv~d~----~-~~I~~id~~~~~v~~~~~~--~~-~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGE----Q-HPTRLIDFEKEYVSTVYSG--LS-KVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVIT 220 (430)
T ss_dssp EEEEEEEEB----T-EEEEEEETTTTEEEEEECC--CS-CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEE
T ss_pred CCeEEEEeC----C-CcEEEEECCCCEEEEEecC--CC-CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeee
Confidence 388998872 2 8999999999877665321 11 111122 33566 5555442222 23445555554444222
Q ss_pred EECCCCCccccEEEee-cCcEEEEec-CCeEEEEeCCCCcEEE
Q 048294 294 TVGPFEGMFHPLGFWK-TGGFFAENQ-SNQMILYDPRTEEMKN 334 (375)
Q Consensus 294 ~i~~~~~~~~~~~~~~-~~~ll~~~~-~~~~~~yd~~~~~~~~ 334 (375)
.+... ....-+++.+ +|.+++... .+++..||++++....
T Consensus 221 ~l~~~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 221 ELTKG-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp EEEEC-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred eeccC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 22211 1123345566 677777653 5789999998877643
No 116
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=38.08 E-value=2.8e+02 Score=26.66 Aligned_cols=113 Identities=16% Similarity=0.142 Sum_probs=56.5
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCc--eeeee-cCCCCCC---C-ccceeEEecCeEEEEEecCCCcEEEEEEEc
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDE--VYEEI-QGPCLPQ---S-VYVVMGLYKECISLLVLKTIEFCFEIWTMK 285 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e--~~~~i-~lP~~~~---~-~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~ 285 (375)
++..+|.+|... ....|.++|..+. .|+.- ..|.... . ...-....+|++.+... +.. |..++
T Consensus 64 P~v~~g~vyv~~-----~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---dg~--l~AlD 133 (582)
T 1flg_A 64 AIVSDGVIYVTA-----SYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---DAS--VVALN 133 (582)
T ss_dssp CEEETTEEEEEE-----TTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---TTE--EEEEE
T ss_pred cEEECCEEEEEc-----CCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---CCE--EEEEE
Confidence 888999999877 2134999998765 45442 2222110 0 00112234666554432 222 33333
Q ss_pred C----ceeeEEEEECC-C-CCccccEEEee--cCc-EEEE-ec------CCeEEEEeCCCCcEEEE
Q 048294 286 D----KEWTKKLTVGP-F-EGMFHPLGFWK--TGG-FFAE-NQ------SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 286 ~----~~W~~~~~i~~-~-~~~~~~~~~~~--~~~-ll~~-~~------~~~~~~yd~~~~~~~~v 335 (375)
- ..|.....-.. . .....|+.... +|. .++. .. ++.++.||.+|++..+.
T Consensus 134 ~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 134 KNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp SSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 2 45665321100 0 01124443322 132 3433 22 57899999999987764
No 117
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=37.68 E-value=1.8e+02 Score=24.44 Aligned_cols=98 Identities=12% Similarity=0.050 Sum_probs=51.5
Q ss_pred EEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCc
Q 048294 233 VVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGG 312 (375)
Q Consensus 233 ~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ 312 (375)
.|..+|+.+.+...+.++............-+|+..++. ...+.+|-++..+-. ..+.... ...-+.+.++|+
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----~~~v~~~d~~~~~~~--~~~~~~~-~~~~~~~s~dg~ 292 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA----YNVLESFDLEKNASI--KRVPLPH-SYYSVNVSTDGS 292 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE----ESEEEEEETTTTEEE--EEEECSS-CCCEEEECTTSC
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe----CCeEEEEECCCCcCc--ceecCCC-ceeeEEECCCCC
Confidence 688999998876544433221111111112355544443 356777766552222 2222211 123345667777
Q ss_pred EE-EEecCCeEEEEeCCCCcEE-EEEE
Q 048294 313 FF-AENQSNQMILYDPRTEEMK-NFGL 337 (375)
Q Consensus 313 ll-~~~~~~~~~~yd~~~~~~~-~v~~ 337 (375)
.+ +...++.+..||+++++.. .+..
T Consensus 293 ~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 293 TVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 54 4445788999999887654 3444
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=37.32 E-value=2e+02 Score=24.77 Aligned_cols=97 Identities=8% Similarity=0.064 Sum_probs=53.7
Q ss_pred CceEEEEEECCCceeeeec-CCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECC-CCCccccEE
Q 048294 230 GHKVVLSFDLGDEVYEEIQ-GPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGP-FEGMFHPLG 306 (375)
Q Consensus 230 ~~~~il~fDl~~e~~~~i~-lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~-~~~~~~~~~ 306 (375)
....|..+|+.+.+...+. .+.... ...+. .-+|.+.+.+. .+..+.||-++...-. ...+.. -...-.-+.
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~~~~~~~--i~~~~~~pdg~~lasg~--~dg~i~iwd~~~~~~~-~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHSAKSDVE--YSSGVLHKDSLLLALYS--PDGILDVYNLSSPDQA-SSRFPVDEEAKIKEVK 221 (343)
T ss_dssp TTCCEEEEESSSSCEEEEECCCSSCC--CCEEEECTTSCEEEEEC--TTSCEEEEESSCTTSC-CEECCCCTTSCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEecCCCCc--eEEEEECCCCCEEEEEc--CCCEEEEEECCCCCCC-ccEEeccCCCCEEEEE
Confidence 3456778888877664332 221111 11122 23666655544 5678999988862111 012222 112223445
Q ss_pred EeecCcEEEEecCCeEEEEeCCCCc
Q 048294 307 FWKTGGFFAENQSNQMILYDPRTEE 331 (375)
Q Consensus 307 ~~~~~~ll~~~~~~~~~~yd~~~~~ 331 (375)
+.++|..++...++.+..||+++.+
T Consensus 222 fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 222 FADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ECTTSSEEEEEESSBEEEEETTSST
T ss_pred EeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 5678887776666789999998764
No 119
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=36.76 E-value=2.5e+02 Score=25.73 Aligned_cols=112 Identities=11% Similarity=0.075 Sum_probs=59.3
Q ss_pred ceEeC-----ccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCC-cEEEEEEEcC
Q 048294 213 CVNLD-----GGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIE-FCFEIWTMKD 286 (375)
Q Consensus 213 ~v~~~-----G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~-~~~~iW~l~~ 286 (375)
++.++ |.|||... . ..|..+|+.+.+...+..+.. .........+|.|.+....... ..-.++...+
T Consensus 143 gvavd~~s~~g~Lyv~D~----~-~~I~~id~~~g~v~~~~~~~~--~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQ----R-DAFRHVDFVNQYVDIKTTNIG--QCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp EEEECTTTTTCEEEEECB----T-SCEEEEETTTTEEEEECCCCS--CEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred eEEEccccCCCEEEEEeC----C-CCEEEEECCCCEEEEeecCCC--CccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 67776 89999762 2 789999998888776632111 1111112346776555442111 2223333333
Q ss_pred ceeeEEEEECCCCCccccEEEee-cCcEEEEec-CCeEEEEeCCCCcE
Q 048294 287 KEWTKKLTVGPFEGMFHPLGFWK-TGGFFAENQ-SNQMILYDPRTEEM 332 (375)
Q Consensus 287 ~~W~~~~~i~~~~~~~~~~~~~~-~~~ll~~~~-~~~~~~yd~~~~~~ 332 (375)
..|.....+... ....-+++.+ +|.+++... .+++..||++++++
T Consensus 216 ~~~~~~~~~~~~-~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 216 SGFTERLSLCNA-RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp GTTCCEEEEEEC-SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred CCeecccccccc-CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 333321122111 1112245555 677776654 56789999987776
No 120
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=36.58 E-value=31 Score=25.64 Aligned_cols=42 Identities=19% Similarity=0.328 Sum_probs=28.9
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEE
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIF 168 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (375)
.+++++|.|++| +|..... ..... +.+..|...+.|.|+...
T Consensus 12 ~V~~~d~~~~~W--~p~~~g~-----~gvs~-V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 12 TVMLYDDGNKRW--LPAGTGP-----QAFSR-VQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp ECBEECTTTSSC--CBSSCSC-----CCCEE-EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCce--eECCCCC-----CCccE-EEEEEeCCCCEEEEEEEE
Confidence 478899999996 4544310 01223 788889888899988765
No 121
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=36.54 E-value=3.1e+02 Score=26.71 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=73.9
Q ss_pred eEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCce---eeeecCCCCCCCccce
Q 048294 183 QTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEV---YEEIQGPCLPQSVYVV 259 (375)
Q Consensus 183 ~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~---~~~i~lP~~~~~~~~~ 259 (375)
.+.+.+..++.|+.+....... .. .+..+|.+|..+ +.......|+.+|+.+.. |+.+-.+... .....
T Consensus 253 ~l~~~~~~~~~~~~l~~~~~~~-----~~-~~~~~g~l~~~s-~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~l~~ 324 (695)
T 2bkl_A 253 DVYWKRPGEKDFRLLVKGVGAK-----YE-VHAWKDRFYVLT-DEGAPRQRVFEVDPAKPARASWKEIVPEDSS-ASLLS 324 (695)
T ss_dssp EEEEECTTCSSCEEEEECSSCC-----EE-EEEETTEEEEEE-CTTCTTCEEEEEBTTBCSGGGCEEEECCCSS-CEEEE
T ss_pred EEEEEcCCCCceEEeecCCCce-----EE-EEecCCcEEEEE-CCCCCCCEEEEEeCCCCCccCCeEEecCCCC-CeEEE
Confidence 4445555566787765432111 11 455677765554 222346789999997754 5555333211 11111
Q ss_pred eEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCC-CCccccEEEeecCc-EEEEec----CCeEEEEeCCCCcE
Q 048294 260 MGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPF-EGMFHPLGFWKTGG-FFAENQ----SNQMILYDPRTEEM 332 (375)
Q Consensus 260 l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~~~-ll~~~~----~~~~~~yd~~~~~~ 332 (375)
+...+++|.+... .+....||+++- .. ....+... ......+...++++ +++... ...++.||+++++.
T Consensus 325 ~~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 325 VSIVGGHLSLEYL--KDATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTEEEEEEE--ETTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEECCEEEEEEE--ECCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 2334787766555 356788888873 22 22333321 11111122234554 444332 35799999999887
Q ss_pred EEEE
Q 048294 333 KNFG 336 (375)
Q Consensus 333 ~~v~ 336 (375)
+.+.
T Consensus 401 ~~l~ 404 (695)
T 2bkl_A 401 ELWA 404 (695)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 122
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=36.33 E-value=15 Score=22.14 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=11.6
Q ss_pred CCchHHHHHHHHccCC
Q 048294 6 GDFYEDAVRAILLKQP 21 (375)
Q Consensus 6 ~~LP~Dll~eIL~rLP 21 (375)
.+||.||-.|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4688888888886543
No 123
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=36.30 E-value=2.4e+02 Score=25.31 Aligned_cols=199 Identities=9% Similarity=0.043 Sum_probs=93.1
Q ss_pred cceEEEee-------------CCCeEEEEcccc--cceeccCCCCccCCCcccccceeeeEeecCC-CCCeEEEEEEEEe
Q 048294 108 DGIFCILG-------------NDNRLTLWNPAN--KEYRHVPKCRIIFPRYTTIFRTNFGFGRDPK-NNKYKLVLIFTLW 171 (375)
Q Consensus 108 nGLl~~~~-------------~~~~~~V~NP~T--~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~-~~~ykVv~~~~~~ 171 (375)
+|++.+.. .++.+++++|.+ .+..+|.-.... ++ ...+.. .|+.+.+. .+.-.++.+-...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~-~~-~~~f~P-hGi~~~~d~dg~~~L~Vvnh~~ 136 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNT-LD-ISSFNP-HGISTFIDDDNTVYLLVVNHPG 136 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSS-CC-GGGCCE-EEEEEEECTTCCEEEEEEECST
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCC-CC-cCceee-eeeEEEECCCCcEEEEEEECCC
Confidence 67776664 346799999984 344444322110 00 113344 77776543 3455555554321
Q ss_pred cCCCCCCCCCceEEEEEcCCC--CceeecccCCcccccCCCCcceEeCccEEEeeee---c----------cCCceEEEE
Q 048294 172 DEKNSDLYDFSQTAVYNLSTN--SWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLEL---R----------SNGHKVVLS 236 (375)
Q Consensus 172 ~~~~~~~~~~~~~~vyss~~~--~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~---~----------~~~~~~il~ 236 (375)
....+|+|..+.+ ....+..... ........-.+.-+|.+|.-... . ......+..
T Consensus 137 --------~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 137 --------SSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp --------TCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred --------CCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 2457788776654 3333322211 11111111034556776543210 0 123568999
Q ss_pred EECCCceeee----ecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEee-c
Q 048294 237 FDLGDEVYEE----IQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWK-T 310 (375)
Q Consensus 237 fDl~~e~~~~----i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~-~ 310 (375)
+|.. +.+. +..|.+... .-+|+..++... ....+..+-++. .+......+.. .+...-+++.. +
T Consensus 208 ~d~~--~~~~~~~~l~~pNGia~------spDg~~lYvadt-~~~~I~~~~~~~~g~l~~~~~~~~-~g~PDGi~vD~e~ 277 (355)
T 3sre_A 208 YSPN--DVRVVAEGFDFANGINI------SPDGKYVYIAEL-LAHKIHVYEKHANWTLTPLRVLSF-DTLVDNISVDPVT 277 (355)
T ss_dssp ECTT--CCEEEEEEESSEEEEEE------CTTSSEEEEEEG-GGTEEEEEEECTTSCEEEEEEEEC-SSEEEEEEECTTT
T ss_pred EECC--eEEEeecCCcccCcceE------CCCCCEEEEEeC-CCCeEEEEEECCCCcEecCEEEeC-CCCCceEEEeCCC
Confidence 9885 2322 223332211 235654444432 234455555544 34444333422 23334456666 4
Q ss_pred CcEEEE-e-cCCeEEEEeCC
Q 048294 311 GGFFAE-N-QSNQMILYDPR 328 (375)
Q Consensus 311 ~~ll~~-~-~~~~~~~yd~~ 328 (375)
|.+++. . ...+++.||++
T Consensus 278 G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 278 GDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp CCEEEEEESCHHHHHSCCTT
T ss_pred CcEEEEecCCceEEEEECCC
Confidence 888773 3 23466777776
No 124
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=36.28 E-value=2.3e+02 Score=25.24 Aligned_cols=87 Identities=13% Similarity=0.282 Sum_probs=50.4
Q ss_pred eeeecCCCCCCCcc-ceeEE-ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEE-ecCC
Q 048294 244 YEEIQGPCLPQSVY-VVMGL-YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSN 320 (375)
Q Consensus 244 ~~~i~lP~~~~~~~-~~l~~-~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~ 320 (375)
++.+..|....+.+ ..+.- .++.|+ +.. +.++.||-.+...-.+...+......-.-+++.++|..++. ..++
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lA-vgl---d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg 169 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLA-VAL---DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA 169 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEE-EEE---TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEECCCCcccccceeEEECCCCEEE-EEe---CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC
Confidence 44556676665544 22332 234333 332 57899998776544454444322222244556678887654 4578
Q ss_pred eEEEEeCCCCcEEE
Q 048294 321 QMILYDPRTEEMKN 334 (375)
Q Consensus 321 ~~~~yd~~~~~~~~ 334 (375)
.+..||+++++...
T Consensus 170 ~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 170 EVQLWDVQQQKRLR 183 (420)
T ss_dssp CEEEEETTTTEEEE
T ss_pred eEEEEEcCCCcEEE
Confidence 89999999876543
No 125
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=36.04 E-value=3.3e+02 Score=26.94 Aligned_cols=204 Identities=10% Similarity=0.004 Sum_probs=97.2
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCcc-CCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRII-FPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
-.+|-|-+....+.+..++|.++.+......+.. .+. ........++..|.... +.+... .-.+
T Consensus 321 D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~v~~i~~d~~g~----lWigt~----------~~Gl 385 (781)
T 3v9f_A 321 DSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNES-SLSNKVVSSVCDDGQGK----LWIGTD----------GGGI 385 (781)
T ss_dssp CSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSS-CCSSSCEEEEEECTTSC----EEEEEB----------SSCE
T ss_pred eCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccC-CCCCcceEEEEEcCCCC----EEEEeC----------CCcE
Confidence 3456666665333388999998877766432110 000 00111124555554321 223221 1245
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcccee-E
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVM-G 261 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l-~ 261 (375)
..|+..++.++..... ..... ..-. ++.. +|.+ |+. .....|..||..++++..+..+.........+ .
T Consensus 386 ~~~~~~~~~~~~~~~~-~~~~~-~~v~-~i~~d~~g~l-Wig----t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 457 (781)
T 3v9f_A 386 NVFENGKRVAIYNKEN-RELLS-NSVL-CSLKDSEGNL-WFG----TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYE 457 (781)
T ss_dssp EEEETTEEEEECC------CCC-SBEE-EEEECTTSCE-EEE----ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEE
T ss_pred EEEECCCCeEEEccCC-CCCCC-cceE-EEEECCCCCE-EEE----eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEE
Confidence 5666666555543210 00000 0001 3333 4554 555 13468999999999998876441111111112 2
Q ss_pred EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCC---CCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEEEE
Q 048294 262 LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPF---EGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 262 ~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~---~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v~ 336 (375)
.-+|.|.+... ..+..+-.+...|......... .....-+....+|.+++...++.++.||+++++++.+.
T Consensus 458 d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 458 DKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp CTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEEC
T ss_pred CCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEcc
Confidence 33566665442 2333332222455544322210 11112233345678888776677999999998887653
No 126
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.02 E-value=2.6e+02 Score=27.04 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=22.0
Q ss_pred ceEeCccEEEeeeeccCC-ceEEEEEEC-CCc--eeee
Q 048294 213 CVNLDGGCYWLLELRSNG-HKVVLSFDL-GDE--VYEE 246 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~-~~~il~fDl-~~e--~~~~ 246 (375)
++..+|.+|... . ...+.++|. .+. .|+.
T Consensus 58 P~v~~g~vyv~~-----~~~~~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 58 PLVVDGKMYIHT-----SFPNNTFALGLDDPGTILWQD 90 (599)
T ss_dssp CEEETTEEEEEC-----STTTCEEEEETTCTTSEEEEE
T ss_pred cEEECCEEEEEe-----CCCCEEEEEeCCCCCcEEEEE
Confidence 888999999876 3 467999999 554 4543
No 127
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=34.99 E-value=2.4e+02 Score=24.91 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=52.1
Q ss_pred ceEEEEEECCCceeee-ecCCCCCCCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEE--CCCCCccccEE
Q 048294 231 HKVVLSFDLGDEVYEE-IQGPCLPQSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTV--GPFEGMFHPLG 306 (375)
Q Consensus 231 ~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i--~~~~~~~~~~~ 306 (375)
...|..+|+.+.+... +....... ....+. .-+|++.+.+. .+..+.||-++...- ...+ ........-+.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~ 227 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSC--RDKRVRVIEPRKGTV--VAEKDRPHEGTRPVHAV 227 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEE--TTSEEEEEETTTTEE--EEEEECSSCSSSCCEEE
T ss_pred CCEEEEEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEe--cCCcEEEEeCCCCce--eeeeccCCCCCcceEEE
Confidence 4567888888776532 21111111 111122 22666555554 467899998876322 2233 22111123344
Q ss_pred EeecCcEEEEe----cCCeEEEEeCCCCc
Q 048294 307 FWKTGGFFAEN----QSNQMILYDPRTEE 331 (375)
Q Consensus 307 ~~~~~~ll~~~----~~~~~~~yd~~~~~ 331 (375)
+.+++.++... .++.+..||+++.+
T Consensus 228 ~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp ECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred EcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 55677777664 57789999998754
No 128
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=34.31 E-value=2.2e+02 Score=24.26 Aligned_cols=205 Identities=9% Similarity=-0.020 Sum_probs=100.2
Q ss_pred eecceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
+.+|-+.+.. ..+.++++||.+++...+..... ... .++.+|+... ++... .... .....+
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------~~~-~~i~~~~dg~---l~v~~-~~~~-----~~~~~i 114 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK--------ANP-AAIKIHKDGR---LFVCY-LGDF-----KSTGGI 114 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS--------SSE-EEEEECTTSC---EEEEE-CTTS-----SSCCEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC--------CCc-ceEEECCCCc---EEEEe-CCCC-----CCCceE
Confidence 3467665544 44569999999988776532111 012 5666665532 22221 1110 012366
Q ss_pred EEEEcCCCCceeecccCCcccccCCCCcceEe--CccEEEeeeec--cCCceEEEEEECCCceeeeecCCCCCCCcccee
Q 048294 185 AVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL--DGGCYWLLELR--SNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVM 260 (375)
Q Consensus 185 ~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~--~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l 260 (375)
.+|+..++.-+..-...... .... .+.+ +|.+|...... ......|..+|..+.++..+.- .... ...+
T Consensus 115 ~~~d~~~~~~~~~~~~~~~~---~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~-~~~i 187 (333)
T 2dg1_A 115 FAATENGDNLQDIIEDLSTA---YCID-DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NISV-ANGI 187 (333)
T ss_dssp EEECTTSCSCEEEECSSSSC---CCEE-EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EESS-EEEE
T ss_pred EEEeCCCCEEEEEEccCccC---Cccc-ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCCc-ccce
Confidence 77777776554221110000 0001 2222 57766544210 0124689999988766654421 0000 0112
Q ss_pred E-EecCe-EEEEEecCCCcEEEEEEEcC--ceeeE---EEEECCCC-CccccEEEeecCcEEEEec-CCeEEEEeCCCCc
Q 048294 261 G-LYKEC-ISLLVLKTIEFCFEIWTMKD--KEWTK---KLTVGPFE-GMFHPLGFWKTGGFFAENQ-SNQMILYDPRTEE 331 (375)
Q Consensus 261 ~-~~~g~-L~l~~~~~~~~~~~iW~l~~--~~W~~---~~~i~~~~-~~~~~~~~~~~~~ll~~~~-~~~~~~yd~~~~~ 331 (375)
. .-+|+ |.+... ....+.+|-++. ..... ........ ....-+++.++|.+++... ++.+..||++++.
T Consensus 188 ~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 188 ALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp EECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCE
T ss_pred EECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCCCE
Confidence 1 23555 444432 345677777753 22211 11111111 1223355566788877654 5789999998777
Q ss_pred EEEEEE
Q 048294 332 MKNFGL 337 (375)
Q Consensus 332 ~~~v~~ 337 (375)
++.+..
T Consensus 266 ~~~~~~ 271 (333)
T 2dg1_A 266 IGQILI 271 (333)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 777654
No 129
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=33.53 E-value=2.3e+02 Score=24.42 Aligned_cols=96 Identities=5% Similarity=-0.073 Sum_probs=52.4
Q ss_pred CceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecC--CCcEEEEEEEcC--ceeeEEEEECCCCCcccc
Q 048294 230 GHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKT--IEFCFEIWTMKD--KEWTKKLTVGPFEGMFHP 304 (375)
Q Consensus 230 ~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~--~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~ 304 (375)
....+..+|..+.++..+... .... ...+. .-+|+..++.... ....+.+|.++. ........+.... ..|
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~-~~~~-p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~--~~p 102 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDA-EVAN-PSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG--ADP 102 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEE-ECSC-CCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS--SCE
T ss_pred CCEEEEEEeCCCCCEEEeecc-cCCC-CceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC--CCc
Confidence 345677788888877665332 1111 11122 2356644444432 346899999987 5666655554221 233
Q ss_pred EEEeecCcEEEEe--cCCeEEEEeCCC
Q 048294 305 LGFWKTGGFFAEN--QSNQMILYDPRT 329 (375)
Q Consensus 305 ~~~~~~~~ll~~~--~~~~~~~yd~~~ 329 (375)
..+.-+++.++.. .++.+..||+++
T Consensus 103 ~~~~~dg~~l~~~~~~~~~v~~~~~~~ 129 (361)
T 3scy_A 103 CYLTTNGKNIVTANYSGGSITVFPIGQ 129 (361)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEBCT
T ss_pred EEEEECCCEEEEEECCCCEEEEEEeCC
Confidence 3322266654443 356789999864
No 130
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.47 E-value=36 Score=22.91 Aligned_cols=21 Identities=14% Similarity=0.268 Sum_probs=16.3
Q ss_pred EEEEecCCeEEEEeCCCCcEE
Q 048294 313 FFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 313 ll~~~~~~~~~~yd~~~~~~~ 333 (375)
.+....++++|+||..|++-.
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp EEEEESSSCEEEEETTTTEEC
T ss_pred EEEECCCCCEEEecCccccee
Confidence 455667899999999998643
No 131
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=33.02 E-value=2.4e+02 Score=24.48 Aligned_cols=59 Identities=14% Similarity=0.109 Sum_probs=34.1
Q ss_pred CCcEEEEEEEcCceeeEEEEECC-C---CCccccEEEeecCcEEEEe-cC---CeEEEEeCCCCcEE
Q 048294 275 IEFCFEIWTMKDKEWTKKLTVGP-F---EGMFHPLGFWKTGGFFAEN-QS---NQMILYDPRTEEMK 333 (375)
Q Consensus 275 ~~~~~~iW~l~~~~W~~~~~i~~-~---~~~~~~~~~~~~~~ll~~~-~~---~~~~~yd~~~~~~~ 333 (375)
.+..+.+|-++...-........ . .....-+++.+++.+++.. .+ +.+..||+++++..
T Consensus 205 ~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 205 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 57789999988633222222100 1 1122344556677766554 45 78999999877544
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=32.66 E-value=2.8e+02 Score=24.97 Aligned_cols=186 Identities=10% Similarity=0.001 Sum_probs=93.3
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCceee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWRYF 197 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr~~ 197 (375)
..++++|..|++...+..... .. ..+.+.|..+ +++.... .. ....+.+++..++..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~---------~~-~~~~~spdg~--~la~~~~-~~-------g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR---------HN-GAPAFSPDGS--KLAFALS-KT-------GSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS---------CE-EEEEECTTSS--EEEEEEC-TT-------SSCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC---------cc-cCEEEcCCCC--EEEEEEe-cC-------CCceEEEEECCCCCEEeC
Confidence 369999999988776543221 11 4455555432 2222221 11 244788889888876554
Q ss_pred cccCCcccccCCCCcceEeCcc-EEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEec-C
Q 048294 198 ESFKSSHYHMPWYHDCVNLDGG-CYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLK-T 274 (375)
Q Consensus 198 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~-~ 274 (375)
......... . ...-+|. ++.... ......|..+|+.+.+...+..... ....+. .-+|+..++... .
T Consensus 263 ~~~~~~~~~----~-~~spdg~~l~~~s~--~~g~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 263 TDGRSNNTE----P-TWFPDSQNLAFTSD--QAGRPQVYKVNINGGAPQRITWEGS---QNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp CCCSSCEEE----E-EECTTSSEEEEEEC--TTSSCEEEEEETTSSCCEECCCSSS---EEEEEEECTTSSEEEEEEECS
T ss_pred cCCCCcccc----e-EECCCCCEEEEEEC--CCCCcEEEEEECCCCCEEEEecCCC---cccCeEECCCCCEEEEEECcC
Confidence 432111000 0 1112554 443331 1233478888998876554432211 011111 236664444432 2
Q ss_pred CCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEE-EecCC---eEEEEeCCCCcEEEEEE
Q 048294 275 IEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFA-ENQSN---QMILYDPRTEEMKNFGL 337 (375)
Q Consensus 275 ~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~-~~~~~---~~~~yd~~~~~~~~v~~ 337 (375)
....+.+|-++..... .+... .....+.+.++|..++ ...++ .++.+|++++..+.+.-
T Consensus 333 g~~~i~~~d~~~~~~~---~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQ---VLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp SCEEEEEEETTTCCEE---ECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCC
T ss_pred CceEEEEEECCCCCEE---EecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeC
Confidence 2345666666553322 22211 1223345667887544 43333 79999999988887753
No 133
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=32.33 E-value=4.1e+02 Score=26.80 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=40.7
Q ss_pred ceEEEEEcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeeee-cCCCCCCCcc
Q 048294 182 SQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEI-QGPCLPQSVY 257 (375)
Q Consensus 182 ~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~lP~~~~~~~ 257 (375)
..+++++.+...=+.+.... . .... ++.+ +|.|||.- .....|.++|+....-..+ ..+......
T Consensus 537 ~~I~~~~~dG~~~~~lv~~~--l---~~P~-GLavD~~~~~LYwaD----~~~~~I~~~d~dG~~~~~v~~~~~~l~~P- 605 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTEN--I---QWPN-GITLDLLSGRLYWVD----SKLHSISSIDVNGGNRKTILEDEKRLAHP- 605 (791)
T ss_dssp CEEEEEETTSCCEEEEECSS--C---SCEE-EEEEETTTTEEEEEE----TTTTEEEEEETTSCSCEEEEECTTTTSSE-
T ss_pred CeEEEEecCCCceEEEEeCC--C---CCce-EEEEecCCCeEEEEe----CCCCcEEEEecCCCceEEEecCCCccCCC-
Confidence 36777777654333332110 0 1112 4444 58999986 3567899999976544333 221111111
Q ss_pred ceeEEecCeEEEEEe
Q 048294 258 VVMGLYKECISLLVL 272 (375)
Q Consensus 258 ~~l~~~~g~L~l~~~ 272 (375)
.-|...++.|+++-.
T Consensus 606 ~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 606 FSLAVFEDKVFWTDI 620 (791)
T ss_dssp EEEEEETTEEEEEET
T ss_pred CEEEEeCCEEEEEEC
Confidence 124456777665543
No 134
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=32.23 E-value=2.9e+02 Score=25.09 Aligned_cols=118 Identities=9% Similarity=-0.006 Sum_probs=66.7
Q ss_pred eCccEEEeeeeccCCceEEEEEECCCceeeee---cC-C-----CCC-CCccceeE--EecCeEEEEEecC-----CCcE
Q 048294 216 LDGGCYWLLELRSNGHKVVLSFDLGDEVYEEI---QG-P-----CLP-QSVYVVMG--LYKECISLLVLKT-----IEFC 278 (375)
Q Consensus 216 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i---~l-P-----~~~-~~~~~~l~--~~~g~L~l~~~~~-----~~~~ 278 (375)
.+|.++|.+. ...+..+|+.++.-..+ .+ . ... ......++ .-+++|++..... ....
T Consensus 236 ~dG~~~~vs~-----~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTY-----TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBT-----TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeC-----CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 3788999872 45799999987753222 10 0 000 00111122 2245566654311 2345
Q ss_pred EEEEEEcCceeeEEEEECCCCCccccEEEeecCc-EEEE-ec-CCeEEEEeCCCCcEEE-EEEec
Q 048294 279 FEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGG-FFAE-NQ-SNQMILYDPRTEEMKN-FGLNS 339 (375)
Q Consensus 279 ~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-ll~~-~~-~~~~~~yd~~~~~~~~-v~~~~ 339 (375)
=+||+++-..+..+.+|.... -..-+.+..+++ .|+. +. ++.+..||..+++..+ +...+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCC
T ss_pred CEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCC
Confidence 789999986666666665421 112356677875 5555 33 6789999999876553 54443
No 135
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=32.18 E-value=3.6e+02 Score=26.58 Aligned_cols=29 Identities=21% Similarity=0.405 Sum_probs=20.9
Q ss_pred ceEe---CccEEEeeeeccCCceEEEEEECCCceee
Q 048294 213 CVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYE 245 (375)
Q Consensus 213 ~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~ 245 (375)
++.+ +|.|||.- .....|.++|+....-+
T Consensus 544 Glavd~~~~~LY~aD----~~~~~I~~~d~dG~~~~ 575 (699)
T 1n7d_A 544 GITLDLLSGRLYWVD----SKLHSISSIDVNGGNRK 575 (699)
T ss_dssp CEEECTTTCCEEEEE----TTTTEEEEECSSSSCCE
T ss_pred EEEEeccCCEEEEEe----cCCCeEEEEccCCCceE
Confidence 6666 48999987 45678999999754333
No 136
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=32.16 E-value=3.2e+02 Score=25.51 Aligned_cols=97 Identities=9% Similarity=0.009 Sum_probs=49.7
Q ss_pred CceEEEEEECCCceeeeecCCCCCCCccceeE-Ee----------cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCC
Q 048294 230 GHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LY----------KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPF 298 (375)
Q Consensus 230 ~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~----------~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~ 298 (375)
....|..+|+.+.+.... +..........+. .- +|++.+.+. .+..+.||-++... .....+...
T Consensus 508 ~dg~i~iw~~~~~~~~~~-~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~--~dg~i~iw~~~~~~-~~~~~~~~h 583 (615)
T 1pgu_A 508 VMGKILLYDLQSREVKTS-RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS--LDTNIFIYSVKRPM-KIIKALNAH 583 (615)
T ss_dssp TTSCEEEEETTTTEEEEC-CSCCCSSCEEEEEECCCC------CCSCCEEEEEE--TTSCEEEEESSCTT-CCEEETTSS
T ss_pred CCCeEEEeeCCCCcceeE-eecCCCCceeEEEEcCccccccccccCCCEEEEEc--CCCcEEEEECCCCc-eechhhhcC
Confidence 345677888877654322 2110111111122 12 566665555 46789999998721 122222211
Q ss_pred CCccccEEEeecCcEEEEecCCeEEEEeCCCC
Q 048294 299 EGMFHPLGFWKTGGFFAENQSNQMILYDPRTE 330 (375)
Q Consensus 299 ~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~ 330 (375)
...-.-+.+.+++.++....++.+..||++++
T Consensus 584 ~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 584 KDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp TTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred ccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence 12223345667777333445778999998763
No 137
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=31.51 E-value=1.2e+02 Score=27.01 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=37.7
Q ss_pred EEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEEEE
Q 048294 279 FEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 279 ~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v~ 336 (375)
-.||+.+-.....+.++.... ..-+.+.++|+.++....+.+..||+++++++.+.
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 456666653344555665433 45566788888877665688999999998656554
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=31.13 E-value=3.7e+02 Score=25.94 Aligned_cols=191 Identities=11% Similarity=0.047 Sum_probs=90.8
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCC-Ccee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTN-SWRY 196 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~-~Wr~ 196 (375)
..++++|..|++...+...... .... ..+.+.|..+ +++....... .....+.+++..++ ..+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~------~~~~-~~~~~spdg~--~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK------EKFL-TNLSWSPDEN--ILYVAEVNRA------QNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT------TCEE-EEEEECTTSS--EEEEEEECTT------SCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC------ceeE-eeEEEECCCC--EEEEEEeCCC------CCeeEEEEEECCCCceeeE
Confidence 4689999999887665432110 0111 3444544332 2222222111 12457778888887 6655
Q ss_pred ecccCCcccccCCCCcceE-e--CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCe-EEEEE
Q 048294 197 FESFKSSHYHMPWYHDCVN-L--DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKEC-ISLLV 271 (375)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~-~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~-L~l~~ 271 (375)
+...... .+.....+..+ - +|.+.+... ......|..+|...+....+... .......+. .-+|+ |.+..
T Consensus 300 ~~~~~~~-~~~~~~~~~~~sp~~dg~~l~~~~--~~g~~~l~~~~~~~~~~~~l~~~--~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 300 LFVETDK-HYVEPLHPLTFLPGSNNQFIWQSR--RDGWNHLYLYDTTGRLIRQVTKG--EWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp EEEEECS-SCCCCCSCCEECTTCSSEEEEEEC--TTSSCEEEEEETTSCEEEECCCS--SSCEEEEEEECTTSSEEEEEE
T ss_pred EEEccCC-CeECccCCceeecCCCCEEEEEEc--cCCccEEEEEECCCCEEEecCCC--CeEEEeeeEEcCCCCEEEEEe
Confidence 4321110 11000010222 2 787666552 22456788888776666555321 111111111 22555 43333
Q ss_pred ecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEe-cC----CeEEEEeCCCCcE
Q 048294 272 LKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN-QS----NQMILYDPRTEEM 332 (375)
Q Consensus 272 ~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~-~~----~~~~~yd~~~~~~ 332 (375)
.........||.++- ... ..+.....+ ..+.+.++|+.++.. .+ ..++.+|+++++.
T Consensus 375 ~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~-~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGKT---KDLTPESGM-HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp SSSCTTCBEEEEEETTCCCC---EESCCSSSE-EEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred cCCCCceEEEEEEEcCCCCc---eeccCCCce-EEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 322223567777764 221 222222222 234566777754432 22 4699999988873
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=31.02 E-value=2.7e+02 Score=24.31 Aligned_cols=196 Identities=13% Similarity=0.010 Sum_probs=83.6
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
+.+|.++....++.+.|||..+++........... + . .....+.+.|.. .+ ++ ... . .-.+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~---h-~-~~V~~v~~spdg-~~-l~-sgs--~--------dg~v~ 164 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYE---H-D-DIVKTLSVFSDG-TQ-AV-SGG--K--------DFSVK 164 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECC---C-S-SCEEEEEECSSS-SE-EE-EEE--T--------TSCEE
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCC---C-C-CCEEEEEECCCC-CE-EE-EEe--C--------CCeEE
Confidence 33565655556667999999988755443322111 0 1 112455555532 22 22 111 1 23677
Q ss_pred EEEcCCCCceee-cccCCcccccCCCCcceEe--CccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCccceeE
Q 048294 186 VYNLSTNSWRYF-ESFKSSHYHMPWYHDCVNL--DGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVMG 261 (375)
Q Consensus 186 vyss~~~~Wr~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l~ 261 (375)
+++..++.-... ...... . . ++.+ +|.-+.++. .....|..+|+.+.+... +........ ...+.
T Consensus 165 iwd~~~~~~~~~~~~h~~~----v--~-~v~~s~~~~~~~~s~---~~dg~v~~wd~~~~~~~~~~~~~~~~~~-v~~v~ 233 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSE----V--N-CVAACPGKDTIFLSC---GEDGRILLWDTRKPKPATRIDFCASDTI-PTSVT 233 (357)
T ss_dssp EEETTTTEEEEEECCCSSC----E--E-EEEECTTCSSCEEEE---ETTSCEEECCTTSSSCBCBCCCTTCCSC-EEEEE
T ss_pred EEECCCCcEEEEEcCCCCC----E--E-EEEEccCCCceeeee---ccCCceEEEECCCCceeeeeeecccccc-ccchh
Confidence 888877642211 110000 0 0 2221 232222221 133456777887654322 222111110 11121
Q ss_pred E--ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecC-cEEE-EecCCeEEEEeCCCCcEEE
Q 048294 262 L--YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTG-GFFA-ENQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 262 ~--~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~-~ll~-~~~~~~~~~yd~~~~~~~~ 334 (375)
. -++.+.+... .+..+.||-++... ....+........-+++.+++ .+|. ...++.+..||.++++...
T Consensus 234 ~sp~~~~~la~g~--~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 234 WHPEKDDTFACGD--ETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp ECTTSTTEEEEEE--SSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE
T ss_pred hhhcccceEEEee--cccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE
Confidence 1 1344544433 46779999877611 112222211112334455555 4444 3457889999999886554
No 140
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=30.96 E-value=2.9e+02 Score=24.73 Aligned_cols=111 Identities=15% Similarity=0.207 Sum_probs=57.6
Q ss_pred ceEeCccEEEeeeeccCCceEEEEEECCCcee-eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeE
Q 048294 213 CVNLDGGCYWLLELRSNGHKVVLSFDLGDEVY-EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTK 291 (375)
Q Consensus 213 ~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~ 291 (375)
++..+|...... .....|..+|+.+.+. ..+..+.........+ ..++.+.+.+. .+..+.||-++......
T Consensus 324 ~~~~~~~~l~~~----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~l~s~~--~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 324 GMELKDNILVSG----NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL-QFNKNFVITSS--DDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTEEEEE----ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEE-EECSSEEEEEE--TTSEEEEEETTTCCEEE
T ss_pred EEEEeCCEEEEE----eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEE-EECCCEEEEEe--CCCeEEEEECCCCceee
Confidence 444556544333 2455788899977654 4444443222211222 34566555554 57889999988743333
Q ss_pred EEEECCC---CCccccEEEeecCcEEEEec-CC----eEEEEeCCCC
Q 048294 292 KLTVGPF---EGMFHPLGFWKTGGFFAENQ-SN----QMILYDPRTE 330 (375)
Q Consensus 292 ~~~i~~~---~~~~~~~~~~~~~~ll~~~~-~~----~~~~yd~~~~ 330 (375)
....... .....-+.+.+++.++.... ++ ++..||.+..
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 3321111 11223344556666655433 33 4888887653
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=30.81 E-value=2.4e+02 Score=23.77 Aligned_cols=113 Identities=7% Similarity=-0.032 Sum_probs=60.3
Q ss_pred eCcc-EEEeeeeccCCceEEEEEECCCcee----eeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceee
Q 048294 216 LDGG-CYWLLELRSNGHKVVLSFDLGDEVY----EEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWT 290 (375)
Q Consensus 216 ~~G~-lywl~~~~~~~~~~il~fDl~~e~~----~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~ 290 (375)
-+|. +|... .....|..+|+.+.+. ..++..... ......-+|+..++... ....+.+|-++.....
T Consensus 185 pdg~~l~v~~----~~~~~v~v~d~~~~~~~~~~~~~~~~~~~---~~~~~spdg~~l~v~~~-~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 185 PDGNFAFVAN----LIGNSIGILETQNPENITLLNAVGTNNLP---GTIVVSRDGSTVYVLTE-STVDVFNFNQLSGTLS 256 (331)
T ss_dssp TTSSEEEEEE----TTTTEEEEEECSSTTSCEEEEEEECSSCC---CCEEECTTSSEEEEECS-SEEEEEEEETTTTEEE
T ss_pred CCCCEEEEEe----CCCCeEEEEECCCCcccceeeeccCCCCC---ceEEECCCCCEEEEEEc-CCCEEEEEECCCCcee
Confidence 3676 44433 3456788999987664 233322111 11111336774444332 3455777766654433
Q ss_pred EEEEECCC----CCc---cccEEEeecCcEEEE-ec-CCeEEEEeCCCCcEEEEE
Q 048294 291 KKLTVGPF----EGM---FHPLGFWKTGGFFAE-NQ-SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 291 ~~~~i~~~----~~~---~~~~~~~~~~~ll~~-~~-~~~~~~yd~~~~~~~~v~ 336 (375)
....+... ... ...+++.++|+.++. .. ++.+..||++++....+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~ 311 (331)
T 3u4y_A 257 FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVA 311 (331)
T ss_dssp EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECT
T ss_pred eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccccee
Confidence 33333211 111 123577888886554 33 568999999998877653
No 142
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=30.16 E-value=2.7e+02 Score=24.16 Aligned_cols=191 Identities=12% Similarity=0.044 Sum_probs=94.9
Q ss_pred eeecc-eEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCc
Q 048294 105 GPYDG-IFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFS 182 (375)
Q Consensus 105 ~s~nG-Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 182 (375)
-+.+| .+.+.. .++.+.++|+.|++....-.... .. .++.+++..+ + ++. .. .. .-
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---------~v-~~~~~spdg~-~-l~~-~~-~~--------~~ 96 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---------SP-QGVAVSPDGK-Q-VYV-TN-MA--------SS 96 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---------SE-EEEEECTTSS-E-EEE-EE-TT--------TT
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---------Cc-cceEECCCCC-E-EEE-EE-CC--------CC
Confidence 33455 343443 45679999999987654322111 11 5555665432 2 221 11 11 23
Q ss_pred eEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeee-ecCCCCCCCccceeE
Q 048294 183 QTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEE-IQGPCLPQSVYVVMG 261 (375)
Q Consensus 183 ~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~lP~~~~~~~~~l~ 261 (375)
.+.+|+..++.-...-.... . ...- ...-+|..-+++. .....|..+|+.+.+... +...... ..+.
T Consensus 97 ~v~v~d~~~~~~~~~~~~~~-~---~~~~-~~s~dg~~l~~~~---~~~~~v~~~d~~~~~~~~~~~~~~~~----~~~~ 164 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVKTGK-S---PLGL-ALSPDGKKLYVTN---NGDKTVSVINTVTKAVINTVSVGRSP----KGIA 164 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-S---EEEE-EECTTSSEEEEEE---TTTTEEEEEETTTTEEEEEEECCSSE----EEEE
T ss_pred EEEEEECCCCeEEEEEeCCC-C---cceE-EECCCCCEEEEEe---CCCCEEEEEECCCCcEEEEEecCCCc----ceEE
Confidence 78889988875432211100 0 0000 2223465333331 345688889998876543 3322111 1121
Q ss_pred -EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEEe----cCCeEEEEeCCCCcEE
Q 048294 262 -LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN----QSNQMILYDPRTEEMK 333 (375)
Q Consensus 262 -~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~----~~~~~~~yd~~~~~~~ 333 (375)
.-+|+..++... .+..+.+|-++...-. ..+... ....-+.+.++|+.++.. .++.+..||+++++..
T Consensus 165 ~~~dg~~l~~~~~-~~~~v~~~d~~~~~~~--~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 165 VTPDGTKVYVANF-DSMSISVIDTVTNSVI--DTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEETTTTEEE--EEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEeC-CCCEEEEEECCCCeEE--EEEecC-CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 235554433332 4567888877663222 222221 112334556677665543 3678999999887644
No 143
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=29.84 E-value=93 Score=23.18 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=27.6
Q ss_pred eEEEEccccc-ceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEE
Q 048294 119 RLTLWNPANK-EYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIF 168 (375)
Q Consensus 119 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (375)
.+++.+|.|+ +|...-... .. +.+.+|+..+.|+|+.+.
T Consensus 12 ~V~~~D~~tk~~W~p~g~~~----------~~-V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 12 HVFQIDPNTKKNWVPTSKHA----------VT-VSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEECTTTSCSEEESCSSC----------EE-EEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCCceEeCCCCc----------eE-EEEEEcCCCCEEEEEEcc
Confidence 4889999996 886432211 22 778889888899998754
No 144
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=29.52 E-value=2.8e+02 Score=24.14 Aligned_cols=59 Identities=8% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcEEEEEEEcC--ceeeEEEEE-CCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEE
Q 048294 275 IEFCFEIWTMKD--KEWTKKLTV-GPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 275 ~~~~~~iW~l~~--~~W~~~~~i-~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~ 334 (375)
.+..+.||-++. ......... ... ..-.-+++.++|..|+. ..++.+..||+++++...
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~-~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHD-DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCC-CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 467899998887 223333222 222 22234556678877665 347789999999886543
No 145
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=28.52 E-value=2.7e+02 Score=23.61 Aligned_cols=65 Identities=15% Similarity=0.081 Sum_probs=36.2
Q ss_pred CeEEEEEecCCCcEEEEEEEcC-c-----------eeeEEEEECCCCCccccEEEeec--CcEEEE-ecCCeEEEEeCCC
Q 048294 265 ECISLLVLKTIEFCFEIWTMKD-K-----------EWTKKLTVGPFEGMFHPLGFWKT--GGFFAE-NQSNQMILYDPRT 329 (375)
Q Consensus 265 g~L~l~~~~~~~~~~~iW~l~~-~-----------~W~~~~~i~~~~~~~~~~~~~~~--~~ll~~-~~~~~~~~yd~~~ 329 (375)
|.+.+... .+..+.+|-+.. . .......+........-+++..+ +.+++. ..++.+..||+++
T Consensus 241 ~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 GDLILSKS--CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TTEEEEEC--SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEEe--cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 55444443 477899999876 1 11222222221111122334455 777664 4478899999998
Q ss_pred Cc
Q 048294 330 EE 331 (375)
Q Consensus 330 ~~ 331 (375)
++
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 146
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=27.98 E-value=2.9e+02 Score=23.71 Aligned_cols=199 Identities=9% Similarity=0.020 Sum_probs=94.3
Q ss_pred EeeeecceEEEeeCCCeEEEEccccccee-ccCCCCccCCCcccccceeeeEeecCCC-CCeEEEEEEEEecCCCCCCCC
Q 048294 103 AGGPYDGIFCILGNDNRLTLWNPANKEYR-HVPKCRIIFPRYTTIFRTNFGFGRDPKN-NKYKLVLIFTLWDEKNSDLYD 180 (375)
Q Consensus 103 ~~~s~nGLl~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~-~~ykVv~~~~~~~~~~~~~~~ 180 (375)
+.++.+|-+.+....+.+.++|..+++.. .+.... .... ..+.++|.. +.+ ++. .. .
T Consensus 89 ~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v-~~~~~~~~~~~~~-l~s-~s--~-------- 147 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDS--------ANEI-IYMYGHNEVNTEY-FIW-AD--N-------- 147 (343)
T ss_dssp EEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCC--------SSCE-EEEECCC---CCE-EEE-EE--T--------
T ss_pred EEecCCCeEEEEEccCceEEeecCCcceeEEeecCC--------CCCE-EEEEcCCCCCCCE-EEE-Ee--C--------
Confidence 55666777777666555777777777632 221111 0112 566666622 233 221 11 1
Q ss_pred CceEEEEEcCCCCceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcccee
Q 048294 181 FSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVM 260 (375)
Q Consensus 181 ~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l 260 (375)
.-.+.+|+..++.-........... ...- ...-+|.+.... .....|-.+|+.+.+.....+..........+
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~--i~~~-~~~pdg~~lasg----~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVE--YSSG-VLHKDSLLLALY----SPDGILDVYNLSSPDQASSRFPVDEEAKIKEV 220 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCC--CCEE-EECTTSCEEEEE----CTTSCEEEEESSCTTSCCEECCCCTTSCEEEE
T ss_pred CCcEEEEECCCCcEEEEEecCCCCc--eEEE-EECCCCCEEEEE----cCCCEEEEEECCCCCCCccEEeccCCCCEEEE
Confidence 2367888888765432211110000 0000 122245444333 34567888999887643122222111111222
Q ss_pred E-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCC--CCcc---ccEEEeecCcEEEEe-c-CCeEEEEeCC--CC
Q 048294 261 G-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPF--EGMF---HPLGFWKTGGFFAEN-Q-SNQMILYDPR--TE 330 (375)
Q Consensus 261 ~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~--~~~~---~~~~~~~~~~ll~~~-~-~~~~~~yd~~--~~ 330 (375)
. .-+|...+.+. .+ .+.||-+.... ....+... .... ..+++.++|..++.. . ++.+..|+.+ ++
T Consensus 221 ~fs~~g~~l~s~~--~~-~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 221 KFADNGYWMVVEC--DQ-TVVCFDLRKDV--GTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EECTTSSEEEEEE--SS-BEEEEETTSST--TCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEeCCCCEEEEEe--CC-eEEEEEcCCCC--cceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 2 23566554444 23 89999887611 00111110 0011 236667788877662 3 6778888874 45
Q ss_pred cEEE
Q 048294 331 EMKN 334 (375)
Q Consensus 331 ~~~~ 334 (375)
.|+.
T Consensus 296 ~~~~ 299 (343)
T 3lrv_A 296 NWTK 299 (343)
T ss_dssp SEEE
T ss_pred ceEe
Confidence 5665
No 147
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=27.41 E-value=2.8e+02 Score=23.37 Aligned_cols=70 Identities=4% Similarity=0.005 Sum_probs=41.8
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC-c-eeeEEEEECCCCCccccEEEeecCc-EEE-EecCCeEEEEeC-CCCcEEEEE
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD-K-EWTKKLTVGPFEGMFHPLGFWKTGG-FFA-ENQSNQMILYDP-RTEEMKNFG 336 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~-~-~W~~~~~i~~~~~~~~~~~~~~~~~-ll~-~~~~~~~~~yd~-~~~~~~~v~ 336 (375)
+|++.+++. .+..+.||-++. . .-......... ....-+++.+++. .++ ...++.+..||+ ++++...+.
T Consensus 22 ~~~~l~~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 22 SKSLLLITS--WDGSLTVYKFDIQAKNVDLLQSLRYK-HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp GGTEEEEEE--TTSEEEEEEEETTTTEEEEEEEEECS-SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred CCCEEEEEc--CCCeEEEEEeCCCCccccceeeeecC-CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 555555544 467899999987 3 11122222222 2223345566777 544 455788999999 888776554
No 148
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.76 E-value=64 Score=24.31 Aligned_cols=42 Identities=2% Similarity=-0.243 Sum_probs=24.5
Q ss_pred eEEEEcccccceeccCCCCccCCCcccccceeeeEee---cCCCCCeEEEEEE
Q 048294 119 RLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGR---DPKNNKYKLVLIF 168 (375)
Q Consensus 119 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~---d~~~~~ykVv~~~ 168 (375)
.+++++|.|+.|...-.... +... +.+.. |...+.|+|+...
T Consensus 21 ~Vm~~D~~~~~W~p~~~g~l-------s~v~-v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 21 VVMTRDDSSGGWFPQEGGGI-------SRVG-VCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEECTTSSSSEECSCCSC-------EEEE-EECCBCTTCSSCBCEEEEEEE
T ss_pred EEeeEcCCCCCEeeCCCCCc-------ccEE-EEEecCCCCCCCCEEEEEEEE
Confidence 48889999998754332211 1111 33333 5567789988765
No 149
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=26.30 E-value=3.5e+02 Score=24.19 Aligned_cols=27 Identities=19% Similarity=0.361 Sum_probs=19.3
Q ss_pred eecceEEEeeCCCeEEEEcccccceec
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRH 132 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~ 132 (375)
+.+|+++....++.+.|||..|++...
T Consensus 171 ~~~~~l~s~s~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 171 AHGGILVSGSTDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp CSTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCCEEEEEeCCCCEEEEECCCCcEEE
Confidence 336666666667779999999887553
No 150
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=26.26 E-value=3.3e+02 Score=23.77 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=49.9
Q ss_pred EEEEEECCCceeeeecCC-CCCCCccceeEE-e-cCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCCCCccccEEEee
Q 048294 233 VVLSFDLGDEVYEEIQGP-CLPQSVYVVMGL-Y-KECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWK 309 (375)
Q Consensus 233 ~il~fDl~~e~~~~i~lP-~~~~~~~~~l~~-~-~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~ 309 (375)
.|..+|+.+..-....+. ... .....+.. - +|++.+.+. .+..+.||-++... ....+........-+.+.+
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~--~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSG--RDNTVLLWNPESAE--QLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEE--SSSEEEEECSSSCC--EEEEEECSSSCCCCEEECT
T ss_pred eEEEEeCCCCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEe--CCCCEEEeeCCCCc--cceeecCCCCceEEEEECC
Confidence 677888877431111111 111 11112221 1 566655555 46789999877622 2233332222223455667
Q ss_pred cC-cEEEEe-cCCeEEEEeCCCCc
Q 048294 310 TG-GFFAEN-QSNQMILYDPRTEE 331 (375)
Q Consensus 310 ~~-~ll~~~-~~~~~~~yd~~~~~ 331 (375)
++ .+++.. .++.+..||+++.+
T Consensus 316 ~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp TCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCEEEEEecCCcEEEEEccCCC
Confidence 76 665554 47889999998765
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=26.02 E-value=3e+02 Score=23.29 Aligned_cols=112 Identities=9% Similarity=-0.034 Sum_probs=55.2
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcCceeeEEEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTV 295 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i 295 (375)
+|..-++.. ......|..+|+.+.+.. .++.+.... ......-+|+..++.. ....+.+|-++...=......
T Consensus 151 dg~~l~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 151 ATNTVYISG--IGKESVIWVVDGGNIKLKTAIQNTGKMS--TGLALDSEGKRLYTTN--ADGELITIDTADNKILSRKKL 224 (353)
T ss_dssp TTTEEEEEE--ESSSCEEEEEETTTTEEEEEECCCCTTC--CCCEEETTTTEEEEEC--TTSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEe--cCCCceEEEEcCCCCceEEEecCCCCcc--ceEEECCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEc
Confidence 565333331 123567999999887653 333222111 1111123555444433 245666666554221112222
Q ss_pred CCC--CCccccEEEeecCcEEEE-ec-CCeEEEEeCCCCcEEE
Q 048294 296 GPF--EGMFHPLGFWKTGGFFAE-NQ-SNQMILYDPRTEEMKN 334 (375)
Q Consensus 296 ~~~--~~~~~~~~~~~~~~ll~~-~~-~~~~~~yd~~~~~~~~ 334 (375)
... .....-+.+.++|+.++. .. ++.+..||+++++...
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 111 112223566777775444 33 4789999998877653
No 152
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=25.86 E-value=2.9e+02 Score=23.23 Aligned_cols=103 Identities=12% Similarity=0.178 Sum_probs=0.0
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTV 295 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i 295 (375)
+|.+|.-+ .. |.+||...+.......+.......... +|.|.+... ...+..+-.+. ..|...
T Consensus 70 ~g~l~v~t-----~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~---~~~l~v~t~---~~~l~~~d~~g~~~~~~~--- 133 (330)
T 3hxj_A 70 DGTIYFGS-----DK--VYAINPDGTEKWRFDTKKAIVSDFTIF---EDILYVTSM---DGHLYAINTDGTEKWRFK--- 133 (330)
T ss_dssp TTEECCSS-----CE--EEEECCCGGGGGGSCC-----CCEEEE---TTEEEEECT---TSEEEEECTTSCEEEEEE---
T ss_pred CCcEEEec-----Cc--EEEECCCCcEEEEEECCCCcccCceEE---CCEEEEEec---CCEEEEEcCCCCEEEEEc---
Q ss_pred CCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEEEE
Q 048294 296 GPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 296 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v~ 336 (375)
..........+.+++.+++...++.++.||.+.+......
T Consensus 134 -~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 134 -TKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp -CSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE
T ss_pred -CCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe
No 153
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=25.15 E-value=3.6e+02 Score=23.93 Aligned_cols=56 Identities=9% Similarity=0.064 Sum_probs=38.7
Q ss_pred EEEEEEcCceeeEEEEECCCCCccccEEEeecCc-EEEEec--CCeEEEEeCCCCcEEEE
Q 048294 279 FEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGG-FFAENQ--SNQMILYDPRTEEMKNF 335 (375)
Q Consensus 279 ~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~-ll~~~~--~~~~~~yd~~~~~~~~v 335 (375)
=+||+++-.....+.+|.... ....+.+.++|+ +++..+ ++.+..||.++.+....
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 368888876666666675332 234556678888 666543 68899999999876643
No 154
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=24.51 E-value=3.2e+02 Score=23.12 Aligned_cols=55 Identities=7% Similarity=0.268 Sum_probs=33.1
Q ss_pred CCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecC----cEEE-EecCCeEEEEeCCC
Q 048294 275 IEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTG----GFFA-ENQSNQMILYDPRT 329 (375)
Q Consensus 275 ~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~----~ll~-~~~~~~~~~yd~~~ 329 (375)
.+..+.||-++. ..|.....+..-...-.-+++.+++ .+|+ ...++.+..||+++
T Consensus 187 ~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 187 CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 567899999876 6676665544222222233344443 4444 44578899999876
No 155
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=24.25 E-value=3.3e+02 Score=23.20 Aligned_cols=62 Identities=6% Similarity=0.159 Sum_probs=36.9
Q ss_pred CCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEEEe-cCCeEEEEeCCCCcEEEEE
Q 048294 275 IEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFAEN-QSNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 275 ~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~~-~~~~~~~yd~~~~~~~~v~ 336 (375)
.+..+.||-++. ..+.....+......-.-+.+.+++.+|+.. .++.+..||..++.++.+.
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~ 191 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVA 191 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEE
Confidence 467799998854 4555555554322222334455677766544 4677888888776555443
No 156
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=24.14 E-value=3.1e+02 Score=22.81 Aligned_cols=195 Identities=9% Similarity=-0.024 Sum_probs=91.9
Q ss_pred CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCCCCce
Q 048294 116 NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLSTNSWR 195 (375)
Q Consensus 116 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~~~Wr 195 (375)
..+.++++||.+++...+..+.... ..... .++.+|+..+. +.... . ...+.+|+.. +..+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~----~~~~~-~~i~~~~~~g~--l~v~~---~--------~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG----YGGIP-AGCQCDRDANQ--LFVAD---M--------RLGLLVVQTD-GTFE 104 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT----EECCE-EEEEECSSSSE--EEEEE---T--------TTEEEEEETT-SCEE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC----CCCCC-ceEEEecCCCc--EEEEE---C--------CCCEEEEeCC-CCEE
Confidence 3456999999998877654321100 01122 56667765222 22211 0 1267778877 6655
Q ss_pred ee-cccCCcccccCCCCcceEe--CccEEEeeeec-----------cCCceEEEEEECCCceeeeecCCCCCCCccceeE
Q 048294 196 YF-ESFKSSHYHMPWYHDCVNL--DGGCYWLLELR-----------SNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG 261 (375)
Q Consensus 196 ~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~-----------~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~ 261 (375)
.. ......... .... .+.+ +|.+|+..... ......|..+|.. .++..+.- .... ...+.
T Consensus 105 ~~~~~~~~~~~~-~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~-~~~i~ 178 (314)
T 1pjx_A 105 EIAKKDSEGRRM-QGCN-DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQF-PNGIA 178 (314)
T ss_dssp ECCSBCTTSCBC-BCCC-EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EESS-EEEEE
T ss_pred EEEeccCCCccc-cCCc-CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCCC-cceEE
Confidence 44 221111100 1111 3433 67776654210 0012689999987 55543310 0000 01111
Q ss_pred -E----ecCe-EEEEEecCCCcEEEEEEEcC-ceeeEEEEEC-CC-C--CccccEEEeecCcEEEEe-cCCeEEEEeCCC
Q 048294 262 -L----YKEC-ISLLVLKTIEFCFEIWTMKD-KEWTKKLTVG-PF-E--GMFHPLGFWKTGGFFAEN-QSNQMILYDPRT 329 (375)
Q Consensus 262 -~----~~g~-L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~-~~-~--~~~~~~~~~~~~~ll~~~-~~~~~~~yd~~~ 329 (375)
. -+|+ |.+... ....+.+|-++. ........+. .. . ....-+++.++|.+++.. .++.+..||+++
T Consensus 179 ~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 2 3453 333322 345677776653 3333222211 11 1 122334556678887765 467899999985
Q ss_pred C-cEEEEEE
Q 048294 330 E-EMKNFGL 337 (375)
Q Consensus 330 ~-~~~~v~~ 337 (375)
+ ..+.+..
T Consensus 257 g~~~~~~~~ 265 (314)
T 1pjx_A 257 GQPKMRIRC 265 (314)
T ss_dssp BSCSEEEEC
T ss_pred CcEeEEEeC
Confidence 4 3444443
No 157
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=24.03 E-value=2.9e+02 Score=22.37 Aligned_cols=184 Identities=12% Similarity=0.022 Sum_probs=91.4
Q ss_pred CeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEEEcCC-CCcee
Q 048294 118 NRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVYNLST-NSWRY 196 (375)
Q Consensus 118 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vyss~~-~~Wr~ 196 (375)
+.++++|+.+++...+..... .. ..+.+.|... + ++. .. .-.+.+++..+ +..+.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~---------~v-~~~~~spdg~-~-l~~-~~-----------~~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPE---------LF-EAPNWSPDGK-Y-LLL-NS-----------EGLLYRLSLAGDPSPEK 77 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESS---------CC-EEEEECTTSS-E-EEE-EE-----------TTEEEEEESSSCCSCEE
T ss_pred eeEEEEeCCCCceeeeccCCc---------ce-EeeEECCCCC-E-EEE-Ec-----------CCeEEEEeCCCCCCceE
Confidence 469999999998776543211 11 4455555433 2 222 11 12788899888 76655
Q ss_pred ecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-EecCeEEEEEecCC
Q 048294 197 FESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG-LYKECISLLVLKTI 275 (375)
Q Consensus 197 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~-~~~g~L~l~~~~~~ 275 (375)
......... .... ...-+|...............|..+|+.+.+...+..... ...+. .-+|+..++... .
T Consensus 78 ~~~~~~~~~--~~~~-~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~-~ 149 (297)
T 2ojh_A 78 VDTGFATIC--NNDH-GISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGI-R 149 (297)
T ss_dssp CCCTTCCCB--CSCC-EECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEE-E
T ss_pred ecccccccc--ccce-EECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEEC-C
Confidence 442211010 1111 2223554333332112245688888988776555433221 11111 225664443322 3
Q ss_pred CcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeecCcEEE-Eec---CCeEEEEeCCCCcEEEEE
Q 048294 276 EFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKTGGFFA-ENQ---SNQMILYDPRTEEMKNFG 336 (375)
Q Consensus 276 ~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~~~ll~-~~~---~~~~~~yd~~~~~~~~v~ 336 (375)
+..+.||.++. ... ..+.........+.+.++|..++ ... ..+++.++..++..+.+.
T Consensus 150 ~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 150 DQVFDIYSMDIDSGVE---TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp TTEEEEEEEETTTCCE---EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred CCceEEEEEECCCCcc---eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 56789999865 222 12221112223344556777544 332 245666777777776654
No 158
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=23.13 E-value=3.4e+02 Score=22.92 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=39.6
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEE
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~ 334 (375)
+|+..++.. .+..+.+|-++. ..-. ..+........-+.+.+++..++. ..++.+..||+++.+...
T Consensus 186 ~~~~l~~~~--~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGH--KDGKISKYDVSNNYEYV--DSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEE--TTSEEEEEETTTTTEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEc--CCCEEEEEECCCCcEeE--EEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 555544444 467899998875 3322 222222222233455667776554 457889999999876654
No 159
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=23.13 E-value=3.5e+02 Score=22.96 Aligned_cols=66 Identities=11% Similarity=0.153 Sum_probs=38.3
Q ss_pred eEEEEEecCCCcEEEEEEEcC--cee-eEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEE
Q 048294 266 CISLLVLKTIEFCFEIWTMKD--KEW-TKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMK 333 (375)
Q Consensus 266 ~L~l~~~~~~~~~~~iW~l~~--~~W-~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~ 333 (375)
.+.+.+. .+..+.+|-+.. ... .....+..-...-.-+.+.+++..++. ..++.+..||+++++..
T Consensus 31 ~~l~s~s--~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSAS--RDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEE--TTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEec--CCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 4444444 578899998875 222 222333221122233455677777664 44788999999887643
No 160
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=22.58 E-value=5.5e+02 Score=25.12 Aligned_cols=141 Identities=9% Similarity=0.070 Sum_probs=72.2
Q ss_pred ceEEEEEcCCC--C-ceeecccCCcccccCCCCcceEeC-ccEEEeeeeccCCceEEEEEECCC--ceeeeecCCCCCCC
Q 048294 182 SQTAVYNLSTN--S-WRYFESFKSSHYHMPWYHDCVNLD-GGCYWLLELRSNGHKVVLSFDLGD--EVYEEIQGPCLPQS 255 (375)
Q Consensus 182 ~~~~vyss~~~--~-Wr~~~~~~~~~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~il~fDl~~--e~~~~i~lP~~~~~ 255 (375)
..+.+++..++ . |+.+....... .. .+.-+ +.+|+... .......|+..|+.+ +.|+.+- |.....
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~-----~~-~~~~dg~~l~~~s~-~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~ 365 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQ-----WD-FVDGVGDQLWFVSG-DGAPLKKIVRVDLSGSTPRFDTVV-PESKDN 365 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSC-----EE-EEEEETTEEEEEEC-TTCTTCEEEEEECSSSSCEEEEEE-CCCSSE
T ss_pred ceEEEEECCCCCCcccEEecCCCCce-----EE-EEeccCCEEEEEEC-CCCCCCEEEEEeCCCCccccEEEe-cCCCCe
Confidence 35555565555 5 66554321111 11 23334 45666652 223356899999988 5676653 332211
Q ss_pred ccceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCC-CCccccEEEeecCc-EEEEec----CCeEEEEeCC
Q 048294 256 VYVVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPF-EGMFHPLGFWKTGG-FFAENQ----SNQMILYDPR 328 (375)
Q Consensus 256 ~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~-~~~~~~~~~~~~~~-ll~~~~----~~~~~~yd~~ 328 (375)
...+...++.|.+... .+....||+++- .. ....+... ......+...++++ +++... ...++.||+.
T Consensus 366 -l~~~~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 366 -LESVGIAGNRLFASYI--HDAKSQVLAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp -EEEEEEEBTEEEEEEE--ETTEEEEEEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred -EEEEEEECCEEEEEEE--ECCEEEEEEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 1112334777766555 356678888873 22 22333321 11112223334544 554433 3579999999
Q ss_pred CCcEEEE
Q 048294 329 TEEMKNF 335 (375)
Q Consensus 329 ~~~~~~v 335 (375)
+++.+.+
T Consensus 441 tg~~~~l 447 (741)
T 1yr2_A 441 TAKTTPW 447 (741)
T ss_dssp TTEEEEC
T ss_pred CCcEEEE
Confidence 8876654
No 161
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=22.20 E-value=4e+02 Score=23.33 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=55.5
Q ss_pred cceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEEEE
Q 048294 108 DGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTAVY 187 (375)
Q Consensus 108 nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~vy 187 (375)
.+.|++..... +...++.+.+...+-.. . ... .++.+|+..+. +... . . ..-.+..+
T Consensus 44 ~~~ll~~~~~~-I~~i~~~g~~~~~~~~~-~--------~~~-~~l~~d~~~~~--ly~~-D-~--------~~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANRID-IRQVLPHRSEYTLLLNN-L--------ENA-IALDFHHRREL--VFWS-D-V--------TLDRILRA 100 (349)
T ss_dssp CCEEEEECBSC-EEEECTTSCCEEEEECS-C--------SCE-EEEEEETTTTE--EEEE-E-T--------TTTEEEEE
T ss_pred CceeEeecccc-eEEEeCCCCeeEEeecC-C--------Cce-EEEEEeccccE--EEEE-e-c--------cCCceEEE
Confidence 45566655544 77777766554433211 1 123 78888876543 2221 1 1 12366677
Q ss_pred EcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCcee
Q 048294 188 NLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVY 244 (375)
Q Consensus 188 ss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~ 244 (375)
+..++.-+.+.... . .... ++.+ +|.+||.. .....|..+|+....-
T Consensus 101 ~~~g~~~~~~~~~~--~---~~p~-glavd~~~g~ly~~d----~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 101 NLNGSNVEEVVSTG--L---ESPG-GLAVDWVHDKLYWTD----SGTSRIEVANLDGAHR 150 (349)
T ss_dssp ETTSCSCEEEECSS--C---SCCC-EEEEETTTTEEEEEE----TTTTEEEEEETTSCSC
T ss_pred ecCCCCceEEEeCC--C---CCcc-EEEEecCCCeEEEEc----CCCCeEEEEcCCCCce
Confidence 77765544332110 0 1111 4433 68999987 3456899999876543
No 162
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=22.19 E-value=3.5e+02 Score=22.69 Aligned_cols=141 Identities=13% Similarity=0.056 Sum_probs=73.0
Q ss_pred CceEEEEEcCCC--CceeecccC-CcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcc
Q 048294 181 FSQTAVYNLSTN--SWRYFESFK-SSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVY 257 (375)
Q Consensus 181 ~~~~~vyss~~~--~Wr~~~~~~-~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~ 257 (375)
.-.+.+++..++ .|+...... ..+ .. .+.-+|.++. . ....|..||...+....+..|..... .
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~-----~~-~~~pdG~ilv-s-----~~~~V~~~d~~G~~~W~~~~~~~~~~-~ 80 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECN-----SV-AATKAGEILF-S-----YSKGAKMITRDGRELWNIAAPAGCEM-Q 80 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCC-----EE-EECTTSCEEE-E-----CBSEEEEECTTSCEEEEEECCTTCEE-E
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCc-----Ce-EECCCCCEEE-e-----CCCCEEEECCCCCEEEEEcCCCCccc-c
Confidence 346778887776 477654221 111 11 3444787766 4 24579999995444455665532111 0
Q ss_pred ceeEEecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCC--C--CccccEEEeecCcEEEEec-CCeEEEEeCCCCc
Q 048294 258 VVMGLYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPF--E--GMFHPLGFWKTGGFFAENQ-SNQMILYDPRTEE 331 (375)
Q Consensus 258 ~~l~~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~--~--~~~~~~~~~~~~~ll~~~~-~~~~~~yd~~~~~ 331 (375)
..-..-+|++.++... ..-.|+.++. .+......+... . ...+.+....+|.+++... +++++.||++.+.
T Consensus 81 ~~~~~~dG~~lv~~~~---~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~ 157 (276)
T 3no2_A 81 TARILPDGNALVAWCG---HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQL 157 (276)
T ss_dssp EEEECTTSCEEEEEES---TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred ccEECCCCCEEEEecC---CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCCCE
Confidence 1111346776555442 1235566654 332222233211 0 1122334567788877654 6889999999555
Q ss_pred EEEEEE
Q 048294 332 MKNFGL 337 (375)
Q Consensus 332 ~~~v~~ 337 (375)
+-++..
T Consensus 158 ~w~~~~ 163 (276)
T 3no2_A 158 LNSVKL 163 (276)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 445543
No 163
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=22.15 E-value=3.8e+02 Score=23.12 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=50.2
Q ss_pred eEEEEEECCCcee-eeecCCCCC----------CCccceeE-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEEC---
Q 048294 232 KVVLSFDLGDEVY-EEIQGPCLP----------QSVYVVMG-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVG--- 296 (375)
Q Consensus 232 ~~il~fDl~~e~~-~~i~lP~~~----------~~~~~~l~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~--- 296 (375)
..|..+|+.+.+. ..+..|... ......+. .-+|++.+... .+..+.||-++...-.......
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~ 335 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG--WDGKLRFWDVKTKERITTLNMHCDD 335 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE--TTSEEEEEETTTTEEEEEEECCGGG
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe--CCCeEEEEEcCCCceeEEEecccCc
Confidence 6899999987654 334433210 01111122 22566555444 4678999988763222222211
Q ss_pred -CC---------------CCccccEEEeecC----------cEEEE-ecCCeEEEEeCCCCc
Q 048294 297 -PF---------------EGMFHPLGFWKTG----------GFFAE-NQSNQMILYDPRTEE 331 (375)
Q Consensus 297 -~~---------------~~~~~~~~~~~~~----------~ll~~-~~~~~~~~yd~~~~~ 331 (375)
.. .....-+.+.+++ .+++. ..++.+..||+++++
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 336 IEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 11 1112334555666 45554 458889999988753
No 164
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=22.00 E-value=3.5e+02 Score=22.59 Aligned_cols=108 Identities=9% Similarity=0.084 Sum_probs=0.0
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEec---CeEEEEEecCCCcEEEEEEEcCceeeEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYK---ECISLLVLKTIEFCFEIWTMKDKEWTKKL 293 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~---g~L~l~~~~~~~~~~~iW~l~~~~W~~~~ 293 (375)
+|..--.+ .....|-.+|+.++....+..-.........+.... |.+.+.+. .+.++.||-++...|....
T Consensus 20 ~g~~las~----s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s--~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 20 YGKRMATC----SSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS--YDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp TSSEEEEE----ETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE--TTTEEEEEEBSSSCBCCCE
T ss_pred CCCEEEEE----eCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc--CCCEEEEEEcCCCceEEEE
Q ss_pred EECCCCCccccEEEeec--CcEEEEec-CCeEEEEeCCCC
Q 048294 294 TVGPFEGMFHPLGFWKT--GGFFAENQ-SNQMILYDPRTE 330 (375)
Q Consensus 294 ~i~~~~~~~~~~~~~~~--~~ll~~~~-~~~~~~yd~~~~ 330 (375)
.+......-.-+.+.++ +.+++... ++.+..||++++
T Consensus 94 ~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 94 VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
No 165
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=21.83 E-value=4.3e+02 Score=23.54 Aligned_cols=191 Identities=12% Similarity=0.018 Sum_probs=90.0
Q ss_pred ecceEEEee-CCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 107 YDGIFCILG-NDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 107 ~nGLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+|.|.+.+ ..++++.+++.++....+-...... . .++.+|+..+. +... . . ..-.++
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~--------p-~glavd~~~g~--lY~~-d-~--------~~~~I~ 184 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES--------P-GGLAVDWVHDK--LYWT-D-S--------GTSRIE 184 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC--------C-CCEEEETTTTE--EEEE-E-T--------TTTEEE
T ss_pred CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC--------c-cEEEEEeCCCe--EEEE-c-C--------CCCeEE
Confidence 456666655 3456778888776544433222211 1 56666654432 1111 1 1 123566
Q ss_pred EEEcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE-
Q 048294 186 VYNLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG- 261 (375)
Q Consensus 186 vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~- 261 (375)
+++.+...-+.+.... . .... ++.+ +|.+||... .....|..+|+....-..+-- ...... .-+.
T Consensus 185 ~~~~dg~~~~~l~~~~----l-~~P~-giavdp~~g~ly~td~---~~~~~I~r~~~dG~~~~~~~~-~~~~~P-nGlav 253 (386)
T 3v65_B 185 VANLDGAHRKVLLWQS----L-EKPR-AIALHPMEGTIYWTDW---GNTPRIEASSMDGSGRRIIAD-THLFWP-NGLTI 253 (386)
T ss_dssp ECBTTSCSCEEEECSS----C-SCEE-EEEEETTTTEEEEEEC---SSSCEEEEEETTSCSCEEEEC-SSCSCE-EEEEE
T ss_pred EEeCCCCceEEeecCC----C-CCCc-EEEEEcCCCeEEEecc---CCCCEEEEEeCCCCCcEEEEE-CCCCCe-eeEEE
Confidence 6666544322221110 0 1111 3333 589999873 223789999987654333311 111111 1122
Q ss_pred E-ecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEe-ecCcEEEEec-CCeEEEEeC-CCCcEEEEE
Q 048294 262 L-YKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFW-KTGGFFAENQ-SNQMILYDP-RTEEMKNFG 336 (375)
Q Consensus 262 ~-~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~-~~~~ll~~~~-~~~~~~yd~-~~~~~~~v~ 336 (375)
. .+++|+++-.. .. .|++.+- ..-.+. .+. .....|.++. .++.+++... .+++..+|. ..+..+.+.
T Consensus 254 d~~~~~lY~aD~~--~~--~I~~~d~dG~~~~~-~~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 254 DYAGRRMYWVDAK--HH--VIERANLDGSHRKA-VIS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EGGGTEEEEEETT--TT--EEEEECTTSCSCEE-EEC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred eCCCCEEEEEECC--CC--EEEEEeCCCCeeEE-EEE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 2 46777766542 33 3444443 211111 111 1234555543 3455666544 678999994 444555554
No 166
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=21.70 E-value=3.4e+02 Score=22.40 Aligned_cols=59 Identities=14% Similarity=0.291 Sum_probs=36.9
Q ss_pred CcEEEEEEEcCceeeEEEEECCCCCccccEEEeecCcEEEE-ecCCeEEEEeCCCCcEEE
Q 048294 276 EFCFEIWTMKDKEWTKKLTVGPFEGMFHPLGFWKTGGFFAE-NQSNQMILYDPRTEEMKN 334 (375)
Q Consensus 276 ~~~~~iW~l~~~~W~~~~~i~~~~~~~~~~~~~~~~~ll~~-~~~~~~~~yd~~~~~~~~ 334 (375)
+.++.||-++..+-.+..........-.-+++.++++.++. ..++.+..||.++++...
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 57899998776444444433321112233455677777654 457889999999887544
No 167
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=21.38 E-value=1.4e+02 Score=23.75 Aligned_cols=39 Identities=18% Similarity=0.283 Sum_probs=27.2
Q ss_pred eEEEEccccc-ceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEE
Q 048294 119 RLTLWNPANK-EYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIF 168 (375)
Q Consensus 119 ~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 168 (375)
.+++.+|.|+ +|+..-... .. +.+.+|...+.|+|+.+.
T Consensus 17 ~Vm~~D~~tk~~WvP~g~~~----------~~-V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 17 HVFQIDPNTKKNWVPTSKHA----------VT-VSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEECTTSSCCSEESCSSC----------EE-EEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCCceeecCCCC----------eE-EEEEEcCCCCEEEEEEcc
Confidence 4889999997 785432221 12 667789888899998854
No 168
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=21.36 E-value=3.4e+02 Score=22.28 Aligned_cols=188 Identities=13% Similarity=0.074 Sum_probs=88.9
Q ss_pred eecceEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 106 PYDGIFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 106 s~nGLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
+.+++++....++.+.|||..+++....-.... .....+.+.+.. .+ +.... . .-.+.
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~-~~--l~~~~--~--------dg~i~ 84 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ---------GFLNSVCYDSEK-EL--LLFGG--K--------DTMIN 84 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECS---------SCEEEEEEETTT-TE--EEEEE--T--------TSCEE
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC---------ccEEEEEECCCC-CE--EEEec--C--------CCeEE
Confidence 334465555566779999988776443322111 111455555532 22 22221 1 22556
Q ss_pred EEEcCCCC-ceeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeE--E
Q 048294 186 VYNLSTNS-WRYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMG--L 262 (375)
Q Consensus 186 vyss~~~~-Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~--~ 262 (375)
+++..+.. .+...... .+. ..-. .+..+|...... .....|..+|... ....+...... ...+. .
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~--~~i~-~~~~~~~~l~~~----~~d~~i~~~d~~~-~~~~~~~~~~~---v~~~~~~~ 152 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLI-GHQ--GNVC-SLSFQDGVVISG----SWDKTAKVWKEGS-LVYNLQAHNAS---VWDAKVVS 152 (313)
T ss_dssp EEETTCCTTSCC-CEEC-CCS--SCEE-EEEEETTEEEEE----ETTSEEEEEETTE-EEEEEECCSSC---EEEEEEEE
T ss_pred EEEeeecCCCCcccchh-hcc--cCEE-EEEecCCEEEEE----eCCCCEEEEcCCc-EEEecccCCCc---eeEEEEcc
Confidence 66665431 11111110 010 0011 444466544444 2455677788322 22222221111 11111 2
Q ss_pred ecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECC-CCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEE
Q 048294 263 YKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGP-FEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMK 333 (375)
Q Consensus 263 ~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~-~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~ 333 (375)
.++.+.+.+. .+..+.+|-... ....+.. ......-+.+.+++.++....++.+..||+++++..
T Consensus 153 ~~~~~l~~~~--~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 153 FSENKFLTAS--ADKTIKLWQNDK----VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTTEEEEEE--TTSCEEEEETTE----EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEE--CCCCEEEEecCc----eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 2566555554 467788996332 1222222 122234455567777666667889999999877644
No 169
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.10 E-value=4.5e+02 Score=23.58 Aligned_cols=197 Identities=9% Similarity=-0.016 Sum_probs=94.2
Q ss_pred eecceEEEeeC-CCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceE
Q 048294 106 PYDGIFCILGN-DNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQT 184 (375)
Q Consensus 106 s~nGLl~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~ 184 (375)
+.+|-|.+.+. .+.+.++++.+++...+..... .. . +.+++..+ .++. ..... ...+
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~---------~~-~-ia~~~~g~--~l~~-~d~~~--------~~~I 196 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK---------GG-K-PAVTKDKQ--RVYS-IGWEG--------THTV 196 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC---------BC-B-CEECTTSS--EEEE-EBSST--------TCEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC---------CC-c-eeEecCCC--cEEE-EecCC--------CceE
Confidence 35676666553 4679999999988776643311 11 2 44455433 1211 11100 1155
Q ss_pred EEEEcCCCC-ceeecccCCcccccCCCCcceEe-CccEEEeeeeccCCceEEEEEECCCceeeeec---CCCCCCCc-cc
Q 048294 185 AVYNLSTNS-WRYFESFKSSHYHMPWYHDCVNL-DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQ---GPCLPQSV-YV 258 (375)
Q Consensus 185 ~vyss~~~~-Wr~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~---lP~~~~~~-~~ 258 (375)
.+++..++. .+...............- .+.- +|.+|+ + .....|..+|+.+.....+. ........ ..
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~i-av~p~~g~lyv-~----d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAV-ALDETEEWLYF-V----DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBC-EECTTSSEEEE-E----CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEE-EEeCCCCeEEE-E----ECCCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 566655432 223311111010001111 2222 689999 4 13568999999887655541 11111111 10
Q ss_pred eeE-Ee-cCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCC--C----------Ccccc--EEEeecCcEEEEec--C
Q 048294 259 VMG-LY-KECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPF--E----------GMFHP--LGFWKTGGFFAENQ--S 319 (375)
Q Consensus 259 ~l~-~~-~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~--~----------~~~~~--~~~~~~~~ll~~~~--~ 319 (375)
.+. .- +|.|.+... .... |++++. ..-... .... . .+..| +++.++|.+++... .
T Consensus 271 ~ia~~p~~g~lyv~d~--~~~~--I~~~~~~g~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~ 344 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQ--NLSS--VYKITPDGECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG 344 (409)
T ss_dssp EEEEETTTTEEEEEET--TTTE--EEEECTTCCEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT
T ss_pred cEEEeCCCCEEEEEeC--CCCE--EEEEecCCCEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC
Confidence 233 22 577765543 2333 444443 221111 1110 0 12234 44556788877654 5
Q ss_pred CeEEEEeCCCCcEEEEE
Q 048294 320 NQMILYDPRTEEMKNFG 336 (375)
Q Consensus 320 ~~~~~yd~~~~~~~~v~ 336 (375)
.++..+|+.++++..+.
T Consensus 345 ~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 345 YCLRKLDILDGYVSTVA 361 (409)
T ss_dssp CEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCEEEEEe
Confidence 67889997777776553
No 170
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=20.91 E-value=4.2e+02 Score=23.12 Aligned_cols=195 Identities=8% Similarity=0.033 Sum_probs=93.6
Q ss_pred ecc-eEEEeeCCCeEEEEcccccceeccCCCCccCCCcccccceeeeEeecCCCCCeEEEEEEEEecCCCCCCCCCceEE
Q 048294 107 YDG-IFCILGNDNRLTLWNPANKEYRHVPKCRIIFPRYTTIFRTNFGFGRDPKNNKYKLVLIFTLWDEKNSDLYDFSQTA 185 (375)
Q Consensus 107 ~nG-Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~ 185 (375)
.+| ++.....++.+.|||..+++....-.... .....+.+.+... .+.... . .-.+.
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~---------~~v~~~~~~~~~~---~l~s~s--~--------d~~i~ 164 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV---------SEITKLKFFPSGE---ALISSS--Q--------DMQLK 164 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCEEEEETTSSS---------SCEEEEEECTTSS---EEEEEE--T--------TSEEE
T ss_pred cCCCEEEEEECCCCEEEEeCCCcceeeeccccc---------CccEEEEECCCCC---EEEEEe--C--------CCeEE
Confidence 355 44444456679999999887765432211 1125666666432 222221 1 23788
Q ss_pred EEEcCCCCc-eeecccCCcccccCCCCcceEeCccEEEeeeeccCCceEEEEEECCCceee-eecCCCCCCCcccee---
Q 048294 186 VYNLSTNSW-RYFESFKSSHYHMPWYHDCVNLDGGCYWLLELRSNGHKVVLSFDLGDEVYE-EIQGPCLPQSVYVVM--- 260 (375)
Q Consensus 186 vyss~~~~W-r~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~lP~~~~~~~~~l--- 260 (375)
+|+..++.= +......... ..- ...-+|.....+ .....|..+|+.+.+.. .+..+.........+
T Consensus 165 iwd~~~~~~~~~~~~h~~~v----~~~-~~~~~~~~l~s~----~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 165 IWSVKDGSNPRTLIGHRATV----TDI-AIIDRGRNVLSA----SLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEETTTCCCCEEEECCSSCE----EEE-EEETTTTEEEEE----ETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEeCCCCcCceEEcCCCCcE----EEE-EEcCCCCEEEEE----cCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 888876531 1111110000 000 111134433332 13445777787766542 233222111100000
Q ss_pred ------------------E-EecCeEEEEEecCCCcEEEEEEEcCceeeEEEEECCC-CCccccEEEeecCc-EEEE-ec
Q 048294 261 ------------------G-LYKECISLLVLKTIEFCFEIWTMKDKEWTKKLTVGPF-EGMFHPLGFWKTGG-FFAE-NQ 318 (375)
Q Consensus 261 ------------------~-~~~g~L~l~~~~~~~~~~~iW~l~~~~W~~~~~i~~~-~~~~~~~~~~~~~~-ll~~-~~ 318 (375)
. .-+|++.++.. .+..+.||-+.... ....+... .....-+++.+++. +++. ..
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGH--VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE--TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEc--CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 0 23566655554 46679999887622 12222211 12223445566776 5554 45
Q ss_pred CCeEEEEeCCCCc--EEEEE
Q 048294 319 SNQMILYDPRTEE--MKNFG 336 (375)
Q Consensus 319 ~~~~~~yd~~~~~--~~~v~ 336 (375)
++.+..||+++.+ +..+.
T Consensus 312 dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEE
T ss_pred CCeEEEEEcCCCcCchhhhh
Confidence 7889999998754 44443
No 171
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=20.88 E-value=4e+02 Score=22.80 Aligned_cols=112 Identities=10% Similarity=0.009 Sum_probs=0.0
Q ss_pred CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCccceeEEecCeEEEEEecCCCcEEEEEEEcC--ceeeEEEE
Q 048294 217 DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVYVVMGLYKECISLLVLKTIEFCFEIWTMKD--KEWTKKLT 294 (375)
Q Consensus 217 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~~~l~~~~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~ 294 (375)
+|.+...+ .....|..+|+.+.+ ....++.........--.-+|++.+... .+..+.||-++. ........
T Consensus 66 d~~~l~s~----s~Dg~v~iWd~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~d~~v~iw~~~~~~~~~~~~~~ 138 (340)
T 1got_B 66 DSRLLLSA----SQDGKLIIWDSYTTN-KVHAIPLRSSWVMTCAYAPSGNYVACGG--LDNICSIYNLKTREGNVRVSRE 138 (340)
T ss_dssp TSSEEEEE----ETTTEEEEEETTTCC-EEEEEECSSSCEEEEEECTTSSEEEEEE--TTCEEEEEETTTCSBSCEEEEE
T ss_pred CCCEEEEE----eCCCcEEEEECCCCC-cceEeecCCccEEEEEECCCCCEEEEEe--CCCeEEEEECccCCCcceeEEE
Q ss_pred ECCCCCccccEEEeecCcEEEEecCCeEEEEeCCCCcEEEE
Q 048294 295 VGPFEGMFHPLGFWKTGGFFAENQSNQMILYDPRTEEMKNF 335 (375)
Q Consensus 295 i~~~~~~~~~~~~~~~~~ll~~~~~~~~~~yd~~~~~~~~v 335 (375)
+.........+.+.+++.++....++.+..||+++++....
T Consensus 139 ~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTT 179 (340)
T ss_dssp EECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEE
No 172
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=20.43 E-value=3.2e+02 Score=23.84 Aligned_cols=66 Identities=9% Similarity=0.143 Sum_probs=39.2
Q ss_pred cCeEEEEEecCCCcEEEEEEEcC--ceeeEEEEECCCCCccccEEEeec-CcEEEE-ecCCeEEEEeCCCCc
Q 048294 264 KECISLLVLKTIEFCFEIWTMKD--KEWTKKLTVGPFEGMFHPLGFWKT-GGFFAE-NQSNQMILYDPRTEE 331 (375)
Q Consensus 264 ~g~L~l~~~~~~~~~~~iW~l~~--~~W~~~~~i~~~~~~~~~~~~~~~-~~ll~~-~~~~~~~~yd~~~~~ 331 (375)
+|++.+... .+..+.||-++. ........+......-.-+.+.++ +.+++. ..++.+..||+++++
T Consensus 78 ~~~~l~~~~--~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 78 NNKIIAGAL--DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp SSSCEEEEE--SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred CCCeEEEEc--cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 565554444 467899999886 233344444422222234455555 565554 347889999998875
No 173
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=20.42 E-value=6.6e+02 Score=25.22 Aligned_cols=137 Identities=9% Similarity=-0.036 Sum_probs=68.9
Q ss_pred CceEEEEEcCCCCceeecccCCcccccCCCCcceEe---CccEEEeeeeccCCceEEEEEECCCceeeeecCCCCCCCcc
Q 048294 181 FSQTAVYNLSTNSWRYFESFKSSHYHMPWYHDCVNL---DGGCYWLLELRSNGHKVVLSFDLGDEVYEEIQGPCLPQSVY 257 (375)
Q Consensus 181 ~~~~~vyss~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~lP~~~~~~~ 257 (375)
.-.++++++.+..-+.+.... . .... ++.+ +|.|||..+ .....|..+++....-..+- .......
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~~----l-~~P~-gIaVDp~~g~LYwtD~---g~~~~I~~~~~dG~~~~~lv-~~~l~~P- 560 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFREN----G-SKPR-AIVVDPVHGFMYWTDW---GTPAKIKKGGLNGVDIYSLV-TENIQWP- 560 (791)
T ss_dssp TTEEEEEETTSSSEEEEEECT----T-CCEE-EEEEETTTTEEEEEEC---SSSCEEEEEETTSCCEEEEE-CSSCSCE-
T ss_pred CCeEEEEeCCCCeEEEEEeCC----C-CCcc-eEEEecCCCCEEEecC---CCCCeEEEEecCCCceEEEE-eCCCCCc-
Confidence 347888888765544443211 0 1112 5554 589999873 23368999999765444331 1111111
Q ss_pred ceeE--EecCeEEEEEecCCCcEEEEEEEcC-ceeeEEEEECCCCCccccEEEeec-CcEEEEec-CCeEEEEeCCCCcE
Q 048294 258 VVMG--LYKECISLLVLKTIEFCFEIWTMKD-KEWTKKLTVGPFEGMFHPLGFWKT-GGFFAENQ-SNQMILYDPRTEEM 332 (375)
Q Consensus 258 ~~l~--~~~g~L~l~~~~~~~~~~~iW~l~~-~~W~~~~~i~~~~~~~~~~~~~~~-~~ll~~~~-~~~~~~yd~~~~~~ 332 (375)
.-|. ..+|+|+++-. ... .||+.+- ..-.++. +.....+..|+++.-. +.|++... .+.|...|..+++-
T Consensus 561 ~GLavD~~~~~LYwaD~--~~~--~I~~~d~dG~~~~~v-~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 561 NGITLDLLSGRLYWVDS--KLH--SISSIDVNGGNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEEEETTTTEEEEEET--TTT--EEEEEETTSCSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred eEEEEecCCCeEEEEeC--CCC--cEEEEecCCCceEEE-ecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 1122 24677777643 233 3555443 2211111 1111234566666544 44555543 56788899766643
Q ss_pred E
Q 048294 333 K 333 (375)
Q Consensus 333 ~ 333 (375)
.
T Consensus 636 ~ 636 (791)
T 3m0c_C 636 V 636 (791)
T ss_dssp C
T ss_pred e
Confidence 3
No 174
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=20.10 E-value=78 Score=18.34 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=13.8
Q ss_pred ecCCeEEEEeCCCCcEE
Q 048294 317 NQSNQMILYDPRTEEMK 333 (375)
Q Consensus 317 ~~~~~~~~yd~~~~~~~ 333 (375)
..+++.++||..|++-.
T Consensus 17 ~~~G~~YYyN~~T~eS~ 33 (40)
T 2ysi_A 17 TPDGKVYYYNARTRESA 33 (40)
T ss_dssp CTTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEECCCCCEE
Confidence 45788999999998754
Done!