BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048295
MGNSCRRVPLMILLLWFIFIFITISHCHGSRSTNVFNLTPNSPHQQTGHFLGFLPRHFPI
PSSGPSRKHNGIGLQNWRSP

High Scoring Gene Products

Symbol, full name Information P value
IDL2
inflorescence deficient in abscission (IDA)-like 2
protein from Arabidopsis thaliana 1.3e-13
IDL4
inflorescence deficient in abscission (IDA)-like 4
protein from Arabidopsis thaliana 1.5e-12
IDL3
inflorescence deficient in abscission (IDA)-like 3
protein from Arabidopsis thaliana 7.4e-12
IDL5
inflorescence deficient in abscission (IDA)-like 5
protein from Arabidopsis thaliana 3.9e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048295
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010714076 - symbol:IDL2 "inflorescence defici...   177  1.3e-13   1
TAIR|locus:4010713757 - symbol:IDL4 "inflorescence defici...   167  1.5e-12   1
TAIR|locus:4010713951 - symbol:IDL3 "inflorescence defici...   115  7.4e-12   2
TAIR|locus:4010713599 - symbol:IDL5 "inflorescence defici...    97  3.9e-05   1


>TAIR|locus:4010714076 [details] [associations]
            symbol:IDL2 "inflorescence deficient in abscission
            (IDA)-like 2" species:3702 "Arabidopsis thaliana" [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010227 "floral organ
            abscission" evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0005615 GO:GO:0010227 EMBL:AB010076 EMBL:AY642385
            IPI:IPI00536012 RefSeq:NP_001078796.1 UniGene:At.69490
            EnsemblPlants:AT5G64667.1 GeneID:5008332 KEGG:ath:AT5G64667
            TAIR:At5g64667 eggNOG:NOG322945 HOGENOM:HOG000142258 OMA:CNGARTN
            PhylomeDB:Q6DUW9 ProtClustDB:CLSN2920214 Genevestigator:Q6DUW9
            Uniprot:Q6DUW9
        Length = 95

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 34/57 (59%), Positives = 41/57 (71%)

Query:    27 CHGSRS-TNVFNLTPNSPHQQ-----TGHFLGFLPRHFPIPSSGPSRKHNGIGLQNW 77
             C+G+R+ TNVFN  P+  H       T  FLGFLPRHFP+P+SGPSRKHN IGL +W
Sbjct:    34 CNGARTNTNVFNSKPHKKHNDAVSSSTKQFLGFLPRHFPVPASGPSRKHNDIGLLSW 90


>TAIR|locus:4010713757 [details] [associations]
            symbol:IDL4 "inflorescence deficient in abscission
            (IDA)-like 4" species:3702 "Arabidopsis thaliana" [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010227 "floral organ
            abscission" evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005615 EMBL:AB026654 GO:GO:0010227 EMBL:AY642388
            IPI:IPI00518627 RefSeq:NP_001078180.1 UniGene:At.72181 PaxDb:Q6DUW6
            PRIDE:Q6DUW6 EnsemblPlants:AT3G18715.1 GeneID:5008010
            KEGG:ath:AT3G18715 TAIR:At3g18715 eggNOG:NOG251392
            HOGENOM:HOG000142257 OMA:IHHCDAS PhylomeDB:Q6DUW6
            ProtClustDB:CLSN2920165 Genevestigator:Q6DUW6 Uniprot:Q6DUW6
        Length = 93

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 34/61 (55%), Positives = 39/61 (63%)

Query:    26 HCHGSR--STNVFNLTPNSPHQQT----GHFLGFLPRHFPIPSSGPSRKHNGIGLQNWRS 79
             HC  SR  S++VF   PN  H       GHFLGFLPRH P+P+S PSRKHN IG+Q   S
Sbjct:    33 HCDASRFSSSSVFYRNPNYDHSNNTVRRGHFLGFLPRHLPVPASAPSRKHNDIGIQALLS 92

Query:    80 P 80
             P
Sbjct:    93 P 93


>TAIR|locus:4010713951 [details] [associations]
            symbol:IDL3 "inflorescence deficient in abscission
            (IDA)-like 3" species:3702 "Arabidopsis thaliana" [GO:0005576
            "extracellular region" evidence=ISM] [GO:0010227 "floral organ
            abscission" evidence=IMP] [GO:0048046 "apoplast" evidence=TAS]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005615 GO:GO:0048046
            EMBL:AB016893 GO:GO:0010227 EMBL:AL353994 HOGENOM:HOG000142258
            EMBL:AY642387 IPI:IPI00547740 RefSeq:NP_001078560.1
            UniGene:At.72152 EnsemblPlants:AT5G09805.1 GeneID:5008206
            KEGG:ath:AT5G09805 TAIR:At5g09805 eggNOG:NOG317699 OMA:RTIPILV
            PhylomeDB:Q6DUW7 ProtClustDB:CLSN2920196 Genevestigator:Q6DUW7
            Uniprot:Q6DUW7
        Length = 99

 Score = 115 (45.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
 Identities = 23/40 (57%), Positives = 28/40 (70%)

Query:    44 HQQTGH----FLGFLPRHFPIPSSGPSRKHNGIGLQNWRS 79
             HQ   H    FLG LPR FP+P+SGPSRKHN IGL + ++
Sbjct:    60 HQVQDHKSVQFLGSLPRQFPVPTSGPSRKHNEIGLSSTKT 99

 Score = 58 (25.5 bits), Expect = 7.4e-12, Sum P(2) = 7.4e-12
 Identities = 12/22 (54%), Positives = 17/22 (77%)

Query:    25 SHCHGSRSTNVFNLTPNSPHQQ 46
             S C+G+R+TNVFN T + P Q+
Sbjct:    28 SCCNGARTTNVFN-TSSPPKQK 48


>TAIR|locus:4010713599 [details] [associations]
            symbol:IDL5 "inflorescence deficient in abscission
            (IDA)-like 5" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0010227 "floral organ abscission"
            evidence=IMP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005615
            EMBL:AC002291 GO:GO:0010227 EMBL:AY642386 EMBL:EG521009
            EMBL:EG521010 IPI:IPI00543901 RefSeq:NP_001077835.2
            UniGene:At.69550 EnsemblPlants:AT1G76952.1 GeneID:5007852
            KEGG:ath:AT1G76952 TAIR:At1g76952 eggNOG:NOG308370
            HOGENOM:HOG000176858 OMA:FSWRICE Genevestigator:Q6DUW8
            Uniprot:Q6DUW8
        Length = 111

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 24/55 (43%), Positives = 29/55 (52%)

Query:    25 SHCHGSRSTNVFNLTPNSPHQQTGHFLGFLPRHFPIPSSGPSRKHNGIGLQNWRS 79
             +H H ++  N  +  P S       F GFLP+  PIP S PSRKHN  GLQ   S
Sbjct:    52 NHHHQNQGFNGDDYPPES-------FSGFLPKTLPIPHSAPSRKHNVYGLQRTNS 99


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.467    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        67   0.00091  102 3  11 22  0.46    28
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  532 (57 KB)
  Total size of DFA:  110 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.75u 0.11s 8.86t   Elapsed:  00:00:01
  Total cpu time:  8.75u 0.11s 8.86t   Elapsed:  00:00:01
  Start:  Mon May 20 22:26:02 2013   End:  Mon May 20 22:26:03 2013

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