Query 048299
Match_columns 459
No_of_seqs 149 out of 666
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 14:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048299.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048299hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.8 0.00035 1.2E-08 67.6 14.0 169 190-413 71-242 (261)
2 2aot_A HMT, histamine N-methyl 96.3 0.056 1.9E-06 52.1 14.1 119 190-328 53-173 (292)
3 3dh0_A SAM dependent methyltra 96.2 0.078 2.7E-06 48.2 13.6 114 178-327 27-143 (219)
4 3dtn_A Putative methyltransfer 96.0 0.023 7.8E-07 52.4 9.2 177 178-413 33-211 (234)
5 3dp7_A SAM-dependent methyltra 95.8 0.064 2.2E-06 53.7 12.0 118 179-331 170-291 (363)
6 4a6d_A Hydroxyindole O-methylt 95.7 0.096 3.3E-06 52.4 12.8 160 177-413 168-331 (353)
7 3gwz_A MMCR; methyltransferase 95.6 0.13 4.5E-06 51.5 13.4 116 178-331 192-311 (369)
8 3bkx_A SAM-dependent methyltra 95.5 0.31 1.1E-05 45.8 15.1 123 178-335 33-167 (275)
9 2ip2_A Probable phenazine-spec 95.5 0.17 5.8E-06 49.5 13.3 116 178-330 158-275 (334)
10 1vl5_A Unknown conserved prote 95.4 0.28 9.6E-06 45.9 14.4 111 179-328 28-141 (260)
11 3ujc_A Phosphoethanolamine N-m 95.3 0.065 2.2E-06 50.0 9.5 132 159-328 27-160 (266)
12 4fsd_A Arsenic methyltransfera 95.2 0.22 7.7E-06 50.1 13.7 114 190-330 84-206 (383)
13 3dlc_A Putative S-adenosyl-L-m 95.2 0.21 7.2E-06 44.7 12.3 112 176-326 32-146 (219)
14 3i53_A O-methyltransferase; CO 95.2 0.11 3.8E-06 50.9 11.0 105 190-331 170-278 (332)
15 1x19_A CRTF-related protein; m 95.0 0.27 9.3E-06 48.8 13.5 116 177-330 179-298 (359)
16 3htx_A HEN1; HEN1, small RNA m 94.9 0.14 4.9E-06 57.4 11.8 125 177-331 710-838 (950)
17 2r3s_A Uncharacterized protein 94.4 0.63 2.2E-05 45.2 14.0 117 178-331 153-275 (335)
18 3mcz_A O-methyltransferase; ad 94.3 0.44 1.5E-05 46.9 12.8 118 179-330 169-290 (352)
19 3f4k_A Putative methyltransfer 94.1 0.66 2.3E-05 42.9 13.1 128 163-328 20-151 (257)
20 3reo_A (ISO)eugenol O-methyltr 93.9 0.37 1.3E-05 48.3 11.5 110 178-330 192-303 (368)
21 3h2b_A SAM-dependent methyltra 93.9 0.38 1.3E-05 43.0 10.6 106 180-326 33-139 (203)
22 3mgg_A Methyltransferase; NYSG 93.7 0.74 2.5E-05 43.3 12.6 104 190-329 38-144 (276)
23 1qzz_A RDMB, aclacinomycin-10- 93.6 0.66 2.3E-05 45.9 12.6 113 178-328 172-288 (374)
24 3hnr_A Probable methyltransfer 93.4 0.66 2.3E-05 41.9 11.4 111 176-327 33-145 (220)
25 3e23_A Uncharacterized protein 93.4 1.1 3.7E-05 40.3 12.8 109 177-327 31-140 (211)
26 1tw3_A COMT, carminomycin 4-O- 93.3 0.66 2.3E-05 45.7 12.1 114 178-329 173-290 (360)
27 3sm3_A SAM-dependent methyltra 93.3 0.31 1E-05 44.3 9.0 108 190-332 31-146 (235)
28 1xxl_A YCGJ protein; structura 93.2 2.4 8.3E-05 39.0 15.2 113 179-330 12-127 (239)
29 1xtp_A LMAJ004091AAA; SGPP, st 93.1 0.42 1.4E-05 44.2 9.8 114 178-328 83-198 (254)
30 3p9c_A Caffeic acid O-methyltr 93.0 0.43 1.5E-05 47.8 10.3 110 178-330 190-301 (364)
31 3jwg_A HEN1, methyltransferase 93.0 0.28 9.5E-06 44.6 8.2 119 178-331 19-144 (219)
32 3bus_A REBM, methyltransferase 92.7 1.4 4.7E-05 41.2 12.9 114 178-329 51-168 (273)
33 3jwh_A HEN1; methyltransferase 92.4 0.94 3.2E-05 41.0 10.8 116 179-329 20-142 (217)
34 2qe6_A Uncharacterized protein 91.9 2.8 9.6E-05 40.1 14.1 146 159-330 44-199 (274)
35 2fk8_A Methoxy mycolic acid sy 91.9 2.2 7.5E-05 41.1 13.4 112 179-329 81-196 (318)
36 3vc1_A Geranyl diphosphate 2-C 91.1 1.5 5.2E-05 42.3 11.3 110 179-327 107-221 (312)
37 3lst_A CALO1 methyltransferase 90.7 0.95 3.2E-05 44.7 9.6 112 178-330 174-289 (348)
38 1kpg_A CFA synthase;, cyclopro 90.5 0.83 2.8E-05 43.2 8.7 111 179-328 55-169 (287)
39 3m70_A Tellurite resistance pr 90.4 2.7 9.4E-05 39.6 12.3 108 178-325 110-220 (286)
40 3l8d_A Methyltransferase; stru 90.2 3 0.0001 37.9 12.1 97 190-326 54-151 (242)
41 3dli_A Methyltransferase; PSI- 89.6 0.4 1.4E-05 44.3 5.5 94 190-326 42-138 (240)
42 3ocj_A Putative exported prote 89.5 4.7 0.00016 38.6 13.3 104 190-326 119-225 (305)
43 2xvm_A Tellurite resistance pr 88.9 4.4 0.00015 35.4 11.7 111 177-327 21-136 (199)
44 3kkz_A Uncharacterized protein 88.2 4.9 0.00017 37.4 12.1 131 160-328 17-151 (267)
45 3giw_A Protein of unknown func 87.7 1.2 4E-05 43.6 7.5 154 156-331 42-204 (277)
46 3lcv_B Sisomicin-gentamicin re 87.0 3.7 0.00013 40.1 10.5 123 191-355 134-258 (281)
47 3ccf_A Cyclopropane-fatty-acyl 86.7 6.3 0.00022 36.9 12.0 106 178-327 47-153 (279)
48 2vdw_A Vaccinia virus capping 86.6 3.5 0.00012 40.1 10.4 111 190-326 49-167 (302)
49 1nkv_A Hypothetical protein YJ 86.5 6.7 0.00023 35.9 11.8 125 165-328 13-141 (256)
50 2o57_A Putative sarcosine dime 86.2 5.5 0.00019 37.6 11.3 115 178-330 68-190 (297)
51 3u81_A Catechol O-methyltransf 86.0 3.9 0.00013 37.2 9.8 150 154-333 24-175 (221)
52 3g5l_A Putative S-adenosylmeth 85.9 4.3 0.00015 37.4 10.2 111 177-327 33-144 (253)
53 3ofk_A Nodulation protein S; N 85.8 6.5 0.00022 35.0 11.1 109 180-326 43-152 (216)
54 1fp2_A Isoflavone O-methyltran 85.7 2.6 8.7E-05 41.5 9.0 98 190-330 189-291 (352)
55 3g5t_A Trans-aconitate 3-methy 84.8 6.4 0.00022 37.4 11.1 110 190-326 37-147 (299)
56 3fzg_A 16S rRNA methylase; met 84.5 1.5 5.2E-05 40.8 6.1 99 192-328 52-152 (200)
57 4dcm_A Ribosomal RNA large sub 84.5 5.2 0.00018 40.3 10.7 124 175-327 209-333 (375)
58 3ou2_A SAM-dependent methyltra 84.1 5.7 0.0002 35.2 9.9 112 177-329 34-148 (218)
59 3bgv_A MRNA CAP guanine-N7 met 84.1 9.6 0.00033 36.4 12.1 124 179-326 23-153 (313)
60 3mq2_A 16S rRNA methyltransfer 84.1 2.3 7.9E-05 38.3 7.2 67 180-260 19-86 (218)
61 1fp1_D Isoliquiritigenin 2'-O- 83.9 4.6 0.00016 40.0 9.9 109 178-329 198-308 (372)
62 1ve3_A Hypothetical protein PH 83.7 17 0.00059 32.2 13.0 103 190-328 39-143 (227)
63 3g2m_A PCZA361.24; SAM-depende 83.6 2.7 9.3E-05 40.1 7.9 117 176-327 71-189 (299)
64 3p9n_A Possible methyltransfer 83.0 4 0.00014 36.0 8.2 110 190-333 45-158 (189)
65 1wzn_A SAM-dependent methyltra 82.9 9.6 0.00033 34.8 11.1 103 190-328 42-145 (252)
66 1y8c_A S-adenosylmethionine-de 82.6 13 0.00043 33.5 11.7 113 178-327 25-141 (246)
67 3hem_A Cyclopropane-fatty-acyl 82.0 6.8 0.00023 37.3 10.0 113 179-326 63-181 (302)
68 3cgg_A SAM-dependent methyltra 81.8 8.5 0.00029 33.1 9.8 52 178-246 37-88 (195)
69 3thr_A Glycine N-methyltransfe 81.7 2.2 7.6E-05 40.3 6.3 123 178-326 47-173 (293)
70 2p8j_A S-adenosylmethionine-de 81.3 18 0.00061 31.8 12.0 102 190-326 24-126 (209)
71 3frh_A 16S rRNA methylase; met 81.2 4.8 0.00017 38.7 8.4 101 190-328 106-206 (253)
72 3iv6_A Putative Zn-dependent a 81.0 2.3 8E-05 40.8 6.2 54 178-247 35-88 (261)
73 3g07_A 7SK snRNA methylphospha 80.4 3.6 0.00012 39.4 7.4 48 190-250 47-94 (292)
74 2yqz_A Hypothetical protein TT 80.2 13 0.00045 33.9 11.0 100 190-327 40-140 (263)
75 3uwp_A Histone-lysine N-methyl 79.0 11 0.00037 39.1 10.7 121 177-328 162-289 (438)
76 4hg2_A Methyltransferase type 78.9 4.9 0.00017 38.2 7.7 100 192-335 42-143 (257)
77 1zg3_A Isoflavanone 4'-O-methy 78.1 8.6 0.00029 37.8 9.5 107 179-329 182-295 (358)
78 1dus_A MJ0882; hypothetical pr 77.9 21 0.00073 30.5 11.1 114 176-328 40-157 (194)
79 2p7i_A Hypothetical protein; p 77.0 8.7 0.0003 34.6 8.6 109 178-328 31-142 (250)
80 4htf_A S-adenosylmethionine-de 76.0 10 0.00036 35.5 9.1 101 190-327 69-172 (285)
81 3pfg_A N-methyltransferase; N, 75.3 13 0.00043 34.4 9.4 98 190-327 51-150 (263)
82 3i9f_A Putative type 11 methyl 74.9 14 0.00049 31.4 9.0 51 179-245 8-58 (170)
83 1pjz_A Thiopurine S-methyltran 74.4 6.1 0.00021 35.5 6.7 41 190-245 23-63 (203)
84 2qn6_B Translation initiation 73.6 5.2 0.00018 32.6 5.3 38 223-260 50-91 (93)
85 3e8s_A Putative SAM dependent 73.3 9.9 0.00034 33.7 7.8 55 175-245 39-93 (227)
86 3gu3_A Methyltransferase; alph 73.3 60 0.0021 30.3 19.4 104 190-329 23-128 (284)
87 3bkw_A MLL3908 protein, S-aden 73.2 12 0.00042 33.6 8.6 55 177-246 32-86 (243)
88 3lcc_A Putative methyl chlorid 72.7 15 0.00052 33.1 9.1 102 190-326 67-169 (235)
89 4e2x_A TCAB9; kijanose, tetron 72.0 2.3 7.9E-05 42.7 3.5 109 179-327 98-207 (416)
90 1yzh_A TRNA (guanine-N(7)-)-me 71.5 30 0.001 30.8 10.7 112 190-329 42-157 (214)
91 3ege_A Putative methyltransfer 71.3 12 0.0004 34.8 8.1 113 177-334 23-137 (261)
92 2ex4_A Adrenal gland protein A 71.2 8.9 0.0003 35.0 7.1 104 190-329 80-187 (241)
93 1ri5_A MRNA capping enzyme; me 70.9 18 0.0006 33.7 9.3 103 190-326 65-172 (298)
94 3e05_A Precorrin-6Y C5,15-meth 70.6 29 0.001 30.5 10.3 57 178-248 30-86 (204)
95 2pjd_A Ribosomal RNA small sub 69.0 8 0.00027 38.0 6.7 117 176-326 184-301 (343)
96 2avn_A Ubiquinone/menaquinone 68.3 38 0.0013 31.1 11.0 41 190-245 55-95 (260)
97 3hm2_A Precorrin-6Y C5,15-meth 66.3 14 0.00048 31.4 7.0 60 179-256 16-75 (178)
98 2a14_A Indolethylamine N-methy 65.7 18 0.00063 33.6 8.2 44 190-247 56-99 (263)
99 2gb4_A Thiopurine S-methyltran 65.5 29 0.001 32.5 9.6 40 190-244 69-108 (252)
100 4azs_A Methyltransferase WBDD; 65.3 28 0.00097 36.7 10.4 82 190-301 67-149 (569)
101 2o07_A Spermidine synthase; st 64.8 21 0.0007 34.6 8.6 134 190-355 96-233 (304)
102 1vlm_A SAM-dependent methyltra 64.6 76 0.0026 28.1 12.0 23 392-414 164-186 (219)
103 2g72_A Phenylethanolamine N-me 64.5 30 0.001 32.4 9.6 44 190-247 72-115 (289)
104 3cc8_A Putative methyltransfer 64.4 21 0.00072 31.5 8.0 50 178-244 23-72 (230)
105 3ggd_A SAM-dependent methyltra 61.7 26 0.00087 31.8 8.2 106 190-329 57-165 (245)
106 1xj5_A Spermidine synthase 1; 61.3 22 0.00074 35.1 8.1 133 190-353 121-257 (334)
107 1o9g_A RRNA methyltransferase; 61.3 19 0.00064 33.2 7.2 56 181-248 44-99 (250)
108 2p35_A Trans-aconitate 2-methy 60.4 22 0.00074 32.4 7.5 106 179-326 24-130 (259)
109 2kw5_A SLR1183 protein; struct 60.3 84 0.0029 27.2 12.2 51 190-260 31-81 (202)
110 3grz_A L11 mtase, ribosomal pr 59.0 29 0.001 30.5 7.9 69 173-260 43-114 (205)
111 2y1w_A Histone-arginine methyl 57.8 31 0.0011 33.8 8.5 114 177-327 39-154 (348)
112 1inl_A Spermidine synthase; be 57.6 41 0.0014 32.2 9.2 135 190-355 91-229 (296)
113 1uwv_A 23S rRNA (uracil-5-)-me 57.3 84 0.0029 31.8 12.0 110 180-327 278-388 (433)
114 3r0q_C Probable protein argini 57.1 40 0.0014 33.4 9.3 102 190-327 64-168 (376)
115 3d2l_A SAM-dependent methyltra 55.4 55 0.0019 29.2 9.3 102 191-328 35-137 (243)
116 3b3j_A Histone-arginine methyl 55.3 25 0.00086 36.5 7.7 114 178-328 148-263 (480)
117 2pt6_A Spermidine synthase; tr 54.1 19 0.00064 35.2 6.2 132 190-355 117-254 (321)
118 1g6q_1 HnRNP arginine N-methyl 53.7 62 0.0021 31.3 9.9 113 178-326 28-143 (328)
119 2zfu_A Nucleomethylin, cerebra 52.0 28 0.00094 30.8 6.5 18 395-412 158-175 (215)
120 3q7e_A Protein arginine N-meth 51.9 43 0.0015 32.8 8.5 104 190-328 67-173 (349)
121 2yxd_A Probable cobalt-precorr 51.2 29 0.001 29.3 6.4 53 179-247 26-78 (183)
122 3mb5_A SAM-dependent methyltra 50.8 31 0.0011 31.4 6.9 58 179-249 84-141 (255)
123 2b25_A Hypothetical protein; s 50.7 32 0.0011 33.2 7.3 72 166-250 83-154 (336)
124 4dzr_A Protein-(glutamine-N5) 50.6 19 0.00065 31.4 5.1 56 179-248 20-76 (215)
125 1iy9_A Spermidine synthase; ro 50.1 80 0.0027 29.8 9.8 135 190-354 76-212 (275)
126 3p2e_A 16S rRNA methylase; met 50.0 49 0.0017 30.2 8.1 58 190-260 25-83 (225)
127 1u2z_A Histone-lysine N-methyl 49.6 95 0.0032 31.8 10.9 64 178-255 232-298 (433)
128 1zx0_A Guanidinoacetate N-meth 49.1 69 0.0023 28.8 8.9 53 190-260 61-113 (236)
129 3eey_A Putative rRNA methylase 47.3 52 0.0018 28.5 7.5 55 190-260 23-79 (197)
130 1wy7_A Hypothetical protein PH 45.7 40 0.0014 29.5 6.5 53 190-260 50-102 (207)
131 3tr6_A O-methyltransferase; ce 45.6 26 0.00088 31.3 5.3 55 190-260 65-121 (225)
132 2gs9_A Hypothetical protein TT 45.4 72 0.0025 27.8 8.2 48 180-246 29-76 (211)
133 1i9g_A Hypothetical protein RV 45.3 42 0.0014 31.1 6.9 59 178-249 89-147 (280)
134 3mti_A RRNA methylase; SAM-dep 45.3 36 0.0012 29.3 6.0 43 191-248 24-66 (185)
135 1ws6_A Methyltransferase; stru 44.5 61 0.0021 27.0 7.3 44 190-248 42-85 (171)
136 2pwy_A TRNA (adenine-N(1)-)-me 43.3 46 0.0016 30.1 6.7 59 178-249 86-144 (258)
137 2pbf_A Protein-L-isoaspartate 42.9 39 0.0013 30.2 6.0 63 178-249 68-132 (227)
138 3dmg_A Probable ribosomal RNA 42.9 1.5E+02 0.0052 29.4 11.0 119 176-328 215-340 (381)
139 1yz7_A Probable translation in 41.9 43 0.0015 30.6 6.1 38 223-260 133-174 (188)
140 2yxe_A Protein-L-isoaspartate 41.3 45 0.0015 29.4 6.1 57 179-248 68-124 (215)
141 3njr_A Precorrin-6Y methylase; 41.0 48 0.0016 29.6 6.3 63 178-260 45-109 (204)
142 2fhp_A Methylase, putative; al 40.7 73 0.0025 27.0 7.3 45 190-248 45-89 (187)
143 3g89_A Ribosomal RNA small sub 40.2 27 0.00094 32.5 4.7 54 190-260 81-135 (249)
144 3fut_A Dimethyladenosine trans 40.1 24 0.00082 33.8 4.3 73 158-247 12-89 (271)
145 3lpm_A Putative methyltransfer 39.5 73 0.0025 29.3 7.6 44 190-247 50-93 (259)
146 3tqs_A Ribosomal RNA small sub 39.3 46 0.0016 31.4 6.2 54 179-248 20-73 (255)
147 2i62_A Nicotinamide N-methyltr 39.2 1.2E+02 0.004 27.3 8.8 44 190-247 57-100 (265)
148 3fpf_A Mtnas, putative unchara 38.9 1.6E+02 0.0053 28.7 10.0 46 190-248 123-168 (298)
149 1i1n_A Protein-L-isoaspartate 38.9 51 0.0017 29.3 6.2 57 179-248 66-124 (226)
150 2fyt_A Protein arginine N-meth 38.3 1.3E+02 0.0043 29.3 9.4 111 178-325 54-168 (340)
151 1o54_A SAM-dependent O-methylt 37.9 59 0.002 30.2 6.7 58 178-248 102-159 (277)
152 1nv8_A HEMK protein; class I a 37.7 57 0.002 31.0 6.6 53 190-260 124-178 (284)
153 1l3i_A Precorrin-6Y methyltran 37.7 76 0.0026 26.8 6.9 54 179-248 24-77 (192)
154 3tm4_A TRNA (guanine N2-)-meth 37.3 1.5E+02 0.005 29.2 9.8 108 190-326 218-329 (373)
155 1r18_A Protein-L-isoaspartate( 37.3 67 0.0023 28.7 6.8 63 179-249 73-137 (227)
156 1af7_A Chemotaxis receptor met 36.3 29 0.001 33.2 4.2 51 190-245 106-156 (274)
157 1dl5_A Protein-L-isoaspartate 35.9 82 0.0028 30.1 7.5 68 176-260 63-131 (317)
158 2ift_A Putative methylase HI07 35.6 87 0.003 27.6 7.1 105 191-331 55-166 (201)
159 4hc4_A Protein arginine N-meth 35.5 83 0.0028 31.6 7.6 100 192-325 86-186 (376)
160 2kl8_A OR15; structural genomi 35.5 68 0.0023 24.4 5.2 35 224-260 41-75 (85)
161 2fpo_A Methylase YHHF; structu 35.3 74 0.0025 28.1 6.6 100 191-329 56-161 (202)
162 1qam_A ERMC' methyltransferase 35.3 36 0.0012 31.6 4.6 43 190-247 31-73 (244)
163 1xdz_A Methyltransferase GIDB; 35.3 48 0.0016 30.1 5.4 54 190-260 71-125 (240)
164 2esr_A Methyltransferase; stru 35.2 98 0.0033 26.1 7.2 104 190-332 32-142 (177)
165 3bxo_A N,N-dimethyltransferase 35.1 2.3E+02 0.0079 24.8 11.3 98 190-327 41-140 (239)
166 2fca_A TRNA (guanine-N(7)-)-me 34.7 57 0.002 29.2 5.8 54 190-260 39-93 (213)
167 2h1r_A Dimethyladenosine trans 34.5 68 0.0023 30.7 6.6 55 177-247 31-85 (299)
168 2pxx_A Uncharacterized protein 33.3 72 0.0025 27.6 6.1 44 190-247 43-86 (215)
169 3ckk_A TRNA (guanine-N(7)-)-me 32.8 73 0.0025 29.3 6.3 47 190-249 47-93 (235)
170 3dxy_A TRNA (guanine-N(7)-)-me 32.8 82 0.0028 28.5 6.6 113 190-329 35-151 (218)
171 1jsx_A Glucose-inhibited divis 32.7 51 0.0018 28.7 5.0 53 191-260 67-120 (207)
172 2b3t_A Protein methyltransfera 32.2 74 0.0025 29.6 6.3 54 190-260 110-164 (276)
173 2b2c_A Spermidine synthase; be 31.9 1E+02 0.0036 29.8 7.5 132 190-355 109-246 (314)
174 3duw_A OMT, O-methyltransferas 30.5 58 0.002 28.9 5.0 55 190-260 59-115 (223)
175 3adn_A Spermidine synthase; am 30.1 1.8E+02 0.006 27.8 8.7 133 190-356 84-223 (294)
176 1zq9_A Probable dimethyladenos 29.7 92 0.0031 29.5 6.6 53 178-246 18-70 (285)
177 3lbf_A Protein-L-isoaspartate 29.7 90 0.0031 27.2 6.1 55 178-248 67-121 (210)
178 1ne2_A Hypothetical protein TA 29.6 55 0.0019 28.5 4.7 44 190-247 52-95 (200)
179 3tfw_A Putative O-methyltransf 29.4 36 0.0012 31.4 3.5 55 190-260 64-120 (248)
180 1jg1_A PIMT;, protein-L-isoasp 29.1 61 0.0021 29.2 5.0 55 178-247 81-135 (235)
181 2qm3_A Predicted methyltransfe 28.9 4.1E+02 0.014 25.8 13.9 97 190-322 173-271 (373)
182 1m6y_A S-adenosyl-methyltransf 28.8 39 0.0013 32.8 3.8 56 180-249 18-73 (301)
183 3m33_A Uncharacterized protein 28.6 72 0.0025 28.5 5.4 41 190-245 49-89 (226)
184 2nxc_A L11 mtase, ribosomal pr 28.5 90 0.0031 28.8 6.2 65 176-260 106-172 (254)
185 1vbf_A 231AA long hypothetical 28.2 95 0.0032 27.5 6.1 53 179-247 61-113 (231)
186 3gdh_A Trimethylguanosine synt 28.2 1.3E+02 0.0044 26.9 7.1 52 190-260 79-132 (241)
187 3gru_A Dimethyladenosine trans 28.1 75 0.0026 30.7 5.6 67 165-247 22-93 (295)
188 2ozv_A Hypothetical protein AT 28.0 1.1E+02 0.0038 28.3 6.7 57 179-248 26-82 (260)
189 1sui_A Caffeoyl-COA O-methyltr 27.4 1E+02 0.0035 28.3 6.3 55 190-260 80-136 (247)
190 1nt2_A Fibrillarin-like PRE-rR 27.3 85 0.0029 28.2 5.6 41 190-243 58-98 (210)
191 3dr5_A Putative O-methyltransf 27.2 87 0.003 28.4 5.7 55 190-260 57-114 (221)
192 3cw2_C Translation initiation 26.2 70 0.0024 30.6 5.0 38 223-260 223-264 (266)
193 4hhu_A OR280; engineered prote 26.1 80 0.0027 26.9 4.6 41 225-268 124-164 (170)
194 3uzu_A Ribosomal RNA small sub 25.8 97 0.0033 29.6 5.9 55 179-245 33-87 (279)
195 2vdv_E TRNA (guanine-N(7)-)-me 25.8 83 0.0028 28.6 5.3 47 190-249 50-96 (246)
196 1g8a_A Fibrillarin-like PRE-rR 25.7 83 0.0028 28.0 5.2 45 190-246 74-118 (227)
197 2i7c_A Spermidine synthase; tr 25.6 1.3E+02 0.0044 28.4 6.8 109 190-329 79-193 (283)
198 2h00_A Methyltransferase 10 do 25.5 77 0.0026 28.8 5.0 54 190-260 66-121 (254)
199 3c3y_A Pfomt, O-methyltransfer 25.4 1.4E+02 0.0048 27.1 6.8 55 190-260 71-127 (237)
200 2ipx_A RRNA 2'-O-methyltransfe 24.8 94 0.0032 27.8 5.4 41 190-242 78-118 (233)
201 2ksn_A Ubiquitin domain-contai 24.5 61 0.0021 28.1 3.7 36 66-102 57-92 (137)
202 3tva_A Xylose isomerase domain 24.0 87 0.003 29.0 5.1 54 304-357 236-289 (290)
203 3ntv_A MW1564 protein; rossman 23.3 1E+02 0.0034 27.8 5.3 102 190-328 72-176 (232)
204 3ftd_A Dimethyladenosine trans 23.1 71 0.0024 29.8 4.3 52 179-245 22-73 (249)
205 2hnk_A SAM-dependent O-methylt 23.0 1.2E+02 0.004 27.4 5.7 46 190-247 61-106 (239)
206 2avd_A Catechol-O-methyltransf 22.7 1.1E+02 0.0039 26.9 5.5 46 190-247 70-115 (229)
207 2j66_A BTRK, decarboxylase; bu 22.6 3.8E+02 0.013 26.6 10.0 61 190-260 134-223 (428)
208 1byr_A Protein (endonuclease); 22.5 1.5E+02 0.005 24.7 5.9 36 176-215 15-50 (155)
209 1yb2_A Hypothetical protein TA 22.1 78 0.0027 29.4 4.4 56 179-247 101-156 (275)
210 3bwc_A Spermidine synthase; SA 21.6 94 0.0032 29.7 5.0 110 190-329 96-211 (304)
211 3evz_A Methyltransferase; NYSG 21.0 1.3E+02 0.0045 26.6 5.5 53 190-260 56-109 (230)
212 2gpy_A O-methyltransferase; st 20.8 1.1E+02 0.0039 27.2 5.1 45 190-247 55-99 (233)
213 3gjy_A Spermidine synthase; AP 20.5 1.6E+02 0.0056 28.7 6.5 44 190-246 90-133 (317)
214 1p91_A Ribosomal RNA large sub 20.5 1.4E+02 0.0048 27.1 5.8 43 190-245 86-128 (269)
215 3orh_A Guanidinoacetate N-meth 20.4 1.3E+02 0.0046 27.2 5.5 53 190-260 61-113 (236)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.75 E-value=0.00035 Score=67.61 Aligned_cols=169 Identities=13% Similarity=0.164 Sum_probs=95.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+- +.|..+||||+.+.+.++.+.+++.++. ...+.+|. .. +..+
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-------~~~~~~v~gvD~s~~ml~~A~~~~~~~~--~~~~v~~~--~~-D~~~ 134 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-------HHDNCKIIAIDNSPAMIERCRRHIDAYK--APTPVDVI--EG-DIRD 134 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-------CSSSCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEE--ES-CTTT
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-------CCCCCEEEEEECCHHHHHHHHHHHHhhc--cCceEEEe--ec-cccc
Confidence 4579999999984 556666654 4678999999999999988887765432 23345554 22 2222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCCCCCCcchHHHHHHHHHH
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREASHNHPLFLQRFVEAVDH 347 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea~~n~~~F~~RF~eaL~~ 347 (459)
+. ..+-.+++.| +.||++.. ..+..+|+.| +.|+|.- +++.|.-... .+.+...+.+....
T Consensus 135 ~~----------~~~~d~v~~~--~~l~~~~~----~~~~~~l~~i~~~LkpGG~lii~e~~~~~-~~~~~~~~~~~~~~ 197 (261)
T 4gek_A 135 IA----------IENASMVVLN--FTLQFLEP----SERQALLDKIYQGLNPGGALVLSEKFSFE-DAKVGELLFNMHHD 197 (261)
T ss_dssp CC----------CCSEEEEEEE--SCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEBCCS-SHHHHHHHHHHHHH
T ss_pred cc----------ccccccceee--eeeeecCc----hhHhHHHHHHHHHcCCCcEEEEEeccCCC-CHHHHHHHHHHHHH
Confidence 22 2222444444 45788843 2567788887 5799985 5666764432 23333322221111
Q ss_pred HHHHHHhhhhcCCCC-cHHHHHHHHHHHhHhHHHHHhhcCCCccccccchhHHHHHHHhCCCccccC
Q 048299 348 YGAIFDSLEATLPPN-SRERLAVEQVWFGREIVEIVATEGENRKERHERFDSWEMILRSCGYSNVPL 413 (459)
Q Consensus 348 YsalFDsLea~l~~~-~~eR~~iE~~~lg~eI~niVA~eG~~R~eR~E~~~~W~~r~~~aGF~~~~l 413 (459)
|. ...... +.. ...|..+| ++-++.+.+.++.+|+.|||+.+.+
T Consensus 198 ~~-~~~g~s---~~ei~~~~~~l~------------------~~~~~~s~~~~~~~L~~AGF~~ve~ 242 (261)
T 4gek_A 198 FK-RANGYS---ELEISQKRSMLE------------------NVMLTDSVETHKARLHKAGFEHSEL 242 (261)
T ss_dssp HH-HHTTGG---GSTTHHHHHHHH------------------HHCCCBCHHHHHHHHHHHTCSEEEE
T ss_pred HH-HHcCCC---HHHHHHHHhhhc------------------ccccCCCHHHHHHHHHHcCCCeEEE
Confidence 11 100000 000 01122222 2234567889999999999987643
No 2
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.34 E-value=0.056 Score=52.08 Aligned_cols=119 Identities=13% Similarity=0.052 Sum_probs=65.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
..+|+|+|.|.|.--..++..++.+.. .-.+.+|||+++.+.++...+++.+...--++.|+|..... ++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~-------~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~---~~ 122 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYP-------GVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETS---SE 122 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHST-------TCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCH---HH
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCC-------CceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecch---hh
Confidence 679999999999543346777765421 11334599999998888877665321111145666552211 11
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCe-EEEEec
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRV-VTIAER 328 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~i-v~~~E~ 328 (459)
+.. .+.....++..=+|-|...|||+ +| .+.+|+.++ -|+|.- +++++.
T Consensus 123 ~~~----~~~~~~~~~~fD~V~~~~~l~~~-~d-----~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 123 YQS----RMLEKKELQKWDFIHMIQMLYYV-KD-----IPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp HHH----HHHTTTCCCCEEEEEEESCGGGC-SC-----HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhh----hhccccCCCceeEEEEeeeeeec-CC-----HHHHHHHHHHHcCCCcEEEEEEe
Confidence 100 00000122333355566668998 33 456677765 579994 444443
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.20 E-value=0.078 Score=48.16 Aligned_cols=114 Identities=15% Similarity=0.250 Sum_probs=67.0
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
+.|++.+.-.+ .-.|+|+|.|.|.- ...|+.+. +|..++|||+.+...++.+.+++.+ .+++
T Consensus 27 ~~~~~~~~~~~-~~~vLDiG~G~G~~----~~~l~~~~--------~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~ 89 (219)
T 3dh0_A 27 EKVLKEFGLKE-GMTVLDVGTGAGFY----LPYLSKMV--------GEKGKVYAIDVQEEMVNYAWEKVNK----LGLKN 89 (219)
T ss_dssp HHHHHHHTCCT-TCEEEESSCTTCTT----HHHHHHHH--------TTTCEEEEEESCHHHHHHHHHHHHH----HTCTT
T ss_pred HHHHHHhCCCC-CCEEEEEecCCCHH----HHHHHHHh--------CCCcEEEEEECCHHHHHHHHHHHHH----cCCCc
Confidence 56777765554 66899999999863 33344332 3466999999998888877766644 3443
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEe
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAE 327 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E 327 (459)
++|.. . +.+.. ...++..=+|-|...+||+ .+ ...+|+.+ +.|+|.-+ ++++
T Consensus 90 ~~~~~--~-d~~~~----------~~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 90 VEVLK--S-EENKI----------PLPDNTVDFIFMAFTFHEL-SE-----PLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEEE--C-BTTBC----------SSCSSCEEEEEEESCGGGC-SS-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEe--c-ccccC----------CCCCCCeeEEEeehhhhhc-CC-----HHHHHHHHHHHhCCCeEEEEEE
Confidence 55542 1 12211 1222322234444557887 33 34566655 67899854 4444
No 4
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.03 E-value=0.023 Score=52.44 Aligned_cols=177 Identities=15% Similarity=0.164 Sum_probs=93.8
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
+.+++.+......-.|+|+|.|.|. +...|+.+- |..++|||+.+...++.+.+++.. .+ ..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~----~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---------PEATFTLVDMSEKMLEIAKNRFRG----NL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHTCS----CT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---------CCCeEEEEECCHHHHHHHHHhhcc----CC-CE
Confidence 5666666532236899999999984 444555432 356899999998888776665432 22 34
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecCCCCCCc
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAEREASHNHP 335 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ea~~n~~ 335 (459)
+|. .. +..... +. +..=+|-|...|||+.+ ..+..+|+.+ +.|+|.-. ++++.... +.+
T Consensus 95 ~~~--~~-d~~~~~--------~~---~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~ 155 (234)
T 3dtn_A 95 KYI--EA-DYSKYD--------FE---EKYDMVVSALSIHHLED----EDKKELYKRSYSILKESGIFINADLVHG-ETA 155 (234)
T ss_dssp EEE--ES-CTTTCC--------CC---SCEEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEECBC-SSH
T ss_pred EEE--eC-chhccC--------CC---CCceEEEEeCccccCCH----HHHHHHHHHHHHhcCCCcEEEEEEecCC-CCh
Confidence 444 22 222222 11 22223444456888832 2455677776 56899854 44454432 333
Q ss_pred chHHHHHHHHHHHHHHHHhhhhcCCCCcHHHHHHHHHHHhHhHHHHHhhcCCCccccccchhHHHHHHHhCCCccccC
Q 048299 336 LFLQRFVEAVDHYGAIFDSLEATLPPNSRERLAVEQVWFGREIVEIVATEGENRKERHERFDSWEMILRSCGYSNVPL 413 (459)
Q Consensus 336 ~F~~RF~eaL~~YsalFDsLea~l~~~~~eR~~iE~~~lg~eI~niVA~eG~~R~eR~E~~~~W~~r~~~aGF~~~~l 413 (459)
.+...+...+. ..+.. ..+ +.+ ++.+..... ...+.-+.+.|...|+.|||+.+..
T Consensus 156 ~~~~~~~~~~~---~~~~~--~~~---~~~-----------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 156 FIENLNKTIWR---QYVEN--SGL---TEE-----------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHHHHHHHH---HHHHT--SSC---CHH-----------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred hhhhHHHHHHH---HHHHh--cCC---CHH-----------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 33333222211 11111 111 111 111111111 2355667889999999999998754
No 5
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.79 E-value=0.064 Score=53.69 Aligned_cols=118 Identities=16% Similarity=0.101 Sum_probs=67.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--e
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--R 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--p 256 (459)
.+++.+.... .-+|+|+|.|.|. +...|+.+- |.+++|+++. +..++.+.+++ +..|+ .
T Consensus 170 ~~l~~~~~~~-~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~----~~~~~~~~ 230 (363)
T 3dp7_A 170 KALEIVFSHH-PKRLLDIGGNTGK----WATQCVQYN---------KEVEVTIVDL-PQQLEMMRKQT----AGLSGSER 230 (363)
T ss_dssp HHHHHHGGGC-CSEEEEESCTTCH----HHHHHHHHS---------TTCEEEEEEC-HHHHHHHHHHH----TTCTTGGG
T ss_pred HHHHHhcccC-CCEEEEeCCCcCH----HHHHHHHhC---------CCCEEEEEeC-HHHHHHHHHHH----HhcCcccc
Confidence 4555554444 6799999999985 455565543 4579999997 66666665544 33454 3
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCCC
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREAS 331 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea~ 331 (459)
.+|.. .+-.+. +. .+. ..-++++.+. .||++.+ .....+|+.+ +.|+|.- ++++|.-.+
T Consensus 231 v~~~~--~d~~~~-~~------~~p-~~~D~v~~~~--vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 231 IHGHG--ANLLDR-DV------PFP-TGFDAVWMSQ--FLDCFSE----EEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EEEEE--CCCCSS-SC------CCC-CCCSEEEEES--CSTTSCH----HHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred eEEEE--cccccc-CC------CCC-CCcCEEEEec--hhhhCCH----HHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 56552 211111 00 011 1224544444 4788733 2456778777 5689985 556675444
No 6
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.71 E-value=0.096 Score=52.37 Aligned_cols=160 Identities=16% Similarity=0.252 Sum_probs=90.6
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
.+.|++++.-.. .-+|||+|-|.|. ++.+|+.+. |.+|+|.++.+ +.++.+.+++. ....=.
T Consensus 168 ~~~~~~~~~~~~-~~~v~DvGgG~G~----~~~~l~~~~---------p~~~~~~~dlp-~v~~~a~~~~~---~~~~~r 229 (353)
T 4a6d_A 168 GRSVLTAFDLSV-FPLMCDLGGGAGA----LAKECMSLY---------PGCKITVFDIP-EVVWTAKQHFS---FQEEEQ 229 (353)
T ss_dssp HHHHHHSSCGGG-CSEEEEETCTTSH----HHHHHHHHC---------SSCEEEEEECH-HHHHHHHHHSC---C--CCS
T ss_pred HHHHHHhcCccc-CCeEEeeCCCCCH----HHHHHHHhC---------CCceeEeccCH-HHHHHHHHhhh---hcccCc
Confidence 467777766554 5689999999984 566676654 57899988763 45555444332 111112
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCe-EEEEecCCC--C
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRV-VTIAEREAS--H 332 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~i-v~~~E~ea~--~ 332 (459)
.+|.+ .+-.++ .+...+++....+ ||++.++ ....+|+.++ .|+|.- ++++|.-.+ .
T Consensus 230 v~~~~--gD~~~~-----------~~~~~D~~~~~~v--lh~~~d~----~~~~iL~~~~~al~pgg~lli~e~~~~~~~ 290 (353)
T 4a6d_A 230 IDFQE--GDFFKD-----------PLPEADLYILARV--LHDWADG----KCSHLLERIYHTCKPGGGILVIESLLDEDR 290 (353)
T ss_dssp EEEEE--SCTTTS-----------CCCCCSEEEEESS--GGGSCHH----HHHHHHHHHHHHCCTTCEEEEEECCCCTTS
T ss_pred eeeec--CccccC-----------CCCCceEEEeeee--cccCCHH----HHHHHHHHHHhhCCCCCEEEEEEeeeCCCC
Confidence 45542 211111 1122355554444 7887432 4567787774 799984 667776443 2
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhcCCCCcHHHHHHHHHHHhHhHHHHHhhcCCCccccccchhHHHHHHHhCCCcccc
Q 048299 333 NHPLFLQRFVEAVDHYGAIFDSLEATLPPNSRERLAVEQVWFGREIVEIVATEGENRKERHERFDSWEMILRSCGYSNVP 412 (459)
Q Consensus 333 n~~~F~~RF~eaL~~YsalFDsLea~l~~~~~eR~~iE~~~lg~eI~niVA~eG~~R~eR~E~~~~W~~r~~~aGF~~~~ 412 (459)
+.|.+ .++||. . + .+.+.|.+| +.++|+..++.|||+.+.
T Consensus 291 ~~~~~-----------~~~~dl---------------~-m--------l~~~~g~er-----t~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 291 RGPLL-----------TQLYSL---------------N-M--------LVQTEGQER-----TPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp CCCHH-----------HHHHHH---------------H-H--------HHSSSCCCC-----CHHHHHHHHHHHTCEEEE
T ss_pred CCCHH-----------HHHHHH---------------H-H--------HHhCCCcCC-----CHHHHHHHHHHCCCceEE
Confidence 22211 111211 1 0 123345554 568999999999998775
Q ss_pred C
Q 048299 413 L 413 (459)
Q Consensus 413 l 413 (459)
+
T Consensus 331 v 331 (353)
T 4a6d_A 331 F 331 (353)
T ss_dssp E
T ss_pred E
Confidence 5
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.59 E-value=0.13 Score=51.52 Aligned_cols=116 Identities=21% Similarity=0.263 Sum_probs=68.7
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-- 255 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-- 255 (459)
..|++.+.-.+ ..+|+|+|.+.|. +...|+.+. |.+++|+++. +..++.+.+++.+ .|+
T Consensus 192 ~~l~~~~~~~~-~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~----~~l~~ 252 (369)
T 3gwz_A 192 GQVAAAYDFSG-AATAVDIGGGRGS----LMAAVLDAF---------PGLRGTLLER-PPVAEEARELLTG----RGLAD 252 (369)
T ss_dssp HHHHHHSCCTT-CSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHH----TTCTT
T ss_pred HHHHHhCCCcc-CcEEEEeCCCccH----HHHHHHHHC---------CCCeEEEEcC-HHHHHHHHHhhhh----cCcCC
Confidence 45566655454 7899999999995 555566542 4679999998 7777777666543 343
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCC-eEEEEecCCC
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPR-VVTIAEREAS 331 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~-iv~~~E~ea~ 331 (459)
..+|... +-.+.. +. .-++++.+. -||++.+ .....+|+.++ .|+|. .++++|.-.+
T Consensus 253 ~v~~~~~--d~~~~~------p~-----~~D~v~~~~--vlh~~~d----~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 253 RCEILPG--DFFETI------PD-----GADVYLIKH--VLHDWDD----DDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp TEEEEEC--CTTTCC------CS-----SCSEEEEES--CGGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ceEEecc--CCCCCC------CC-----CceEEEhhh--hhccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 3555532 111111 11 124444443 3688732 24557788775 68997 4556665443
No 8
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=95.53 E-value=0.31 Score=45.77 Aligned_cols=123 Identities=20% Similarity=0.170 Sum_probs=70.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHH------HHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIE------ILQRTGERLLKFAQ 251 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~------~l~etg~rL~~fA~ 251 (459)
..|++.+.-.+ .-+|+|+|.|.|. +...|+.+-+ |..++|||+.+.. .++.+.+++.
T Consensus 33 ~~l~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~~g--------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~---- 95 (275)
T 3bkx_A 33 LAIAEAWQVKP-GEKILEIGCGQGD----LSAVLADQVG--------SSGHVTGIDIASPDYGAPLTLGQAWNHLL---- 95 (275)
T ss_dssp HHHHHHHTCCT-TCEEEEESCTTSH----HHHHHHHHHC--------TTCEEEEECSSCTTCCSSSCHHHHHHHHH----
T ss_pred HHHHHHcCCCC-CCEEEEeCCCCCH----HHHHHHHHhC--------CCCEEEEEECCccccccHHHHHHHHHHHH----
Confidence 35666665444 5689999988874 4445555433 4569999998765 6666665543
Q ss_pred HcCC--eEEEEEeecCCCCCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCC--CeEEE
Q 048299 252 SLGL--RFQFHPLLLMNDDPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNP--RVVTI 325 (459)
Q Consensus 252 ~lgv--pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P--~iv~~ 325 (459)
..++ ..+|. ..+..... .+...++ ++|+.+ ..|||+ .+ .+.+++.++.+.| ..+++
T Consensus 96 ~~~~~~~v~~~--~~d~~~~~--------~~~~~~~~fD~v~~~--~~l~~~-~~-----~~~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 96 AGPLGDRLTVH--FNTNLSDD--------LGPIADQHFDRVVLA--HSLWYF-AS-----ANALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp TSTTGGGEEEE--CSCCTTTC--------CGGGTTCCCSEEEEE--SCGGGS-SC-----HHHHHHHHHHHTTTCSEEEE
T ss_pred hcCCCCceEEE--ECChhhhc--------cCCCCCCCEEEEEEc--cchhhC-CC-----HHHHHHHHHHHhCCCCEEEE
Confidence 3343 34554 22201011 1111222 454444 346887 32 2348888888887 46777
Q ss_pred EecCCCCCCc
Q 048299 326 AEREASHNHP 335 (459)
Q Consensus 326 ~E~ea~~n~~ 335 (459)
.+.....+.+
T Consensus 158 ~~~~~~~~~~ 167 (275)
T 3bkx_A 158 AEWSMQPTAL 167 (275)
T ss_dssp EEECSSCSSG
T ss_pred EEecCCCCch
Confidence 7766654443
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=95.46 E-value=0.17 Score=49.53 Aligned_cols=116 Identities=16% Similarity=0.090 Sum_probs=65.4
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..|++.+.-. . .+|+|+|.|.|. +...|+.+. |.+++|+++. +..++.+.+++.+.. +.-.+
T Consensus 158 ~~~~~~~~~~-~-~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v 219 (334)
T 2ip2_A 158 HEIPRLLDFR-G-RSFVDVGGGSGE----LTKAILQAE---------PSARGVMLDR-EGSLGVARDNLSSLL--AGERV 219 (334)
T ss_dssp HHHHHHSCCT-T-CEEEEETCTTCH----HHHHHHHHC---------TTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSE
T ss_pred HHHHHhCCCC-C-CEEEEeCCCchH----HHHHHHHHC---------CCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcE
Confidence 4566655322 2 789999999994 455555432 3569999998 666777666655432 21234
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCC
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREA 330 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea 330 (459)
+|.. .+-.+.. + ..=++++.+ ..||++.+ .....+|+.+ +.|+|.- ++++|...
T Consensus 220 ~~~~--~d~~~~~------~-----~~~D~v~~~--~vl~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 220 SLVG--GDMLQEV------P-----SNGDIYLLS--RIIGDLDE----AASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp EEEE--SCTTTCC------C-----SSCSEEEEE--SCGGGCCH----HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred EEec--CCCCCCC------C-----CCCCEEEEc--hhccCCCH----HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 5542 2111111 1 112444443 34788732 2455777776 5689984 55666543
No 10
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.44 E-value=0.28 Score=45.88 Aligned_cols=111 Identities=11% Similarity=0.171 Sum_probs=64.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-E
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-F 257 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-F 257 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+.+ + + ++|||+.+.+.++.+.+++. ..|++ +
T Consensus 28 ~l~~~l~~~~-~~~vLDiGcG~G~----~~~~l~~~-~------~----~v~gvD~s~~~l~~a~~~~~----~~~~~~v 87 (260)
T 1vl5_A 28 KLMQIAALKG-NEEVLDVATGGGH----VANAFAPF-V------K----KVVAFDLTEDILKVARAFIE----GNGHQQV 87 (260)
T ss_dssp HHHHHHTCCS-CCEEEEETCTTCH----HHHHHGGG-S------S----EEEEEESCHHHHHHHHHHHH----HTTCCSE
T ss_pred HHHHHhCCCC-CCEEEEEeCCCCH----HHHHHHHh-C------C----EEEEEeCCHHHHHHHHHHHH----hcCCCce
Confidence 3455554444 6689999999885 45556543 2 2 89999999888877766543 34544 5
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEec
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAER 328 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ 328 (459)
+|.. . +.+.+. ..++..=+|-|...|||+ .+ ...+|+.+ +-|+|.-. ++++.
T Consensus 88 ~~~~--~-d~~~l~----------~~~~~fD~V~~~~~l~~~-~d-----~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 88 EYVQ--G-DAEQMP----------FTDERFHIVTCRIAAHHF-PN-----PASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp EEEE--C-CC-CCC----------SCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEE--e-cHHhCC----------CCCCCEEEEEEhhhhHhc-CC-----HHHHHHHHHHHcCCCCEEEEEEc
Confidence 5542 2 222221 222322234455568888 33 34555555 67899854 44454
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.34 E-value=0.065 Score=49.97 Aligned_cols=132 Identities=16% Similarity=0.141 Sum_probs=73.9
Q ss_pred HHHhhccCCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHH
Q 048299 159 YLSLNQITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEI 238 (459)
Q Consensus 159 ~~~f~~~~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~ 238 (459)
|..++. ..++.-+.......|++.+.-.+ .-+|+|+|.|.|. +...|+.+.+ .++|||+.+...
T Consensus 27 y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~~~----------~~v~~vD~s~~~ 90 (266)
T 3ujc_A 27 YEFIFG-ENYISSGGLEATKKILSDIELNE-NSKVLDIGSGLGG----GCMYINEKYG----------AHTHGIDICSNI 90 (266)
T ss_dssp HHHHHC-TTCCSTTHHHHHHHHTTTCCCCT-TCEEEEETCTTSH----HHHHHHHHHC----------CEEEEEESCHHH
T ss_pred HHHHhC-CCccccchHHHHHHHHHhcCCCC-CCEEEEECCCCCH----HHHHHHHHcC----------CEEEEEeCCHHH
Confidence 444442 34444455555567777765554 6799999998874 4455555433 389999998877
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-Hh
Q 048299 239 LQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KA 317 (459)
Q Consensus 239 l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~ 317 (459)
++.+.+++... -..+|.. . +..... ..++..=+|-|...|||+.. .....+|+.+ +-
T Consensus 91 ~~~a~~~~~~~-----~~~~~~~--~-d~~~~~----------~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~ 148 (266)
T 3ujc_A 91 VNMANERVSGN-----NKIIFEA--N-DILTKE----------FPENNFDLIYSRDAILALSL----ENKNKLFQKCYKW 148 (266)
T ss_dssp HHHHHHTCCSC-----TTEEEEE--C-CTTTCC----------CCTTCEEEEEEESCGGGSCH----HHHHHHHHHHHHH
T ss_pred HHHHHHHhhcC-----CCeEEEE--C-ccccCC----------CCCCcEEEEeHHHHHHhcCh----HHHHHHHHHHHHH
Confidence 76665544332 2344441 1 122211 11232223444455788832 2456677666 56
Q ss_pred cCCCe-EEEEec
Q 048299 318 LNPRV-VTIAER 328 (459)
Q Consensus 318 L~P~i-v~~~E~ 328 (459)
|+|.- +++.+.
T Consensus 149 L~pgG~l~~~~~ 160 (266)
T 3ujc_A 149 LKPTGTLLITDY 160 (266)
T ss_dssp EEEEEEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 89984 444444
No 12
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=95.24 E-value=0.22 Score=50.13 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=67.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-C----CeEEEEEeec
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-G----LRFQFHPLLL 264 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-g----vpFeF~~v~~ 264 (459)
.-+|+|+|.|.|. +...|+.+-+ |..++|||+.+...++.+.+++.+.+... | -..+|...
T Consensus 84 ~~~VLDlGcG~G~----~~~~la~~~~--------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~-- 149 (383)
T 4fsd_A 84 GATVLDLGCGTGR----DVYLASKLVG--------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG-- 149 (383)
T ss_dssp TCEEEEESCTTSH----HHHHHHHHHT--------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES--
T ss_pred CCEEEEecCccCH----HHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEc--
Confidence 4579999999984 3344554432 34599999999999999998888887665 4 34555522
Q ss_pred CCCCCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecCC
Q 048299 265 MNDDPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAEREA 330 (459)
Q Consensus 265 ~~~e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ea 330 (459)
+.+.+.. .....+.++ ++|+.|++ ||++ .+ ...+|+.+ +-|+|.-. ++.+...
T Consensus 150 -d~~~l~~----~~~~~~~~~~fD~V~~~~~--l~~~-~d-----~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 150 -FIENLAT----AEPEGVPDSSVDIVISNCV--CNLS-TN-----KLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp -CTTCGGG----CBSCCCCTTCEEEEEEESC--GGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred -cHHHhhh----cccCCCCCCCEEEEEEccc--hhcC-CC-----HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 2222210 000022233 45555544 6776 33 44666665 57899854 4445443
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.24 E-value=0.21 Score=44.74 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=67.7
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
....|++.+.... . +|+|+|.|.|. +...|+.++ ..++|||+.+...++.+.+++.. .|+
T Consensus 32 ~~~~~~~~~~~~~-~-~vLdiG~G~G~----~~~~l~~~~----------~~~v~~~D~s~~~~~~a~~~~~~----~~~ 91 (219)
T 3dlc_A 32 IAENIINRFGITA-G-TCIDIGSGPGA----LSIALAKQS----------DFSIRALDFSKHMNEIALKNIAD----ANL 91 (219)
T ss_dssp HHHHHHHHHCCCE-E-EEEEETCTTSH----HHHHHHHHS----------EEEEEEEESCHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHHhcCCCC-C-EEEEECCCCCH----HHHHHHHcC----------CCeEEEEECCHHHHHHHHHHHHh----ccc
Confidence 4466677766554 5 99999999985 555666543 47999999998888877666543 444
Q ss_pred --eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 256 --RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 256 --pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
..+|.. . +.+.+ ...++..=+|-|...|||+ .+ ...+|+.+ +.|+|.-.+++
T Consensus 92 ~~~~~~~~--~-d~~~~----------~~~~~~~D~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 92 NDRIQIVQ--G-DVHNI----------PIEDNYADLIVSRGSVFFW-ED-----VATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp TTTEEEEE--C-BTTBC----------SSCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred cCceEEEE--c-CHHHC----------CCCcccccEEEECchHhhc-cC-----HHHHHHHHHHhCCCCCEEEE
Confidence 355542 2 12221 1222322233444457887 33 44566665 57899865444
No 14
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.17 E-value=0.11 Score=50.94 Aligned_cols=105 Identities=23% Similarity=0.136 Sum_probs=62.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~~v~~~~~ 267 (459)
..+|+|+|.|.| .+...|+.+- |.+++|+++. +..++.+.+++.+ .++ ..+|... +-.
T Consensus 170 ~~~vlDvG~G~G----~~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~----~~~~~~v~~~~~--d~~ 229 (332)
T 3i53_A 170 LGHVVDVGGGSG----GLLSALLTAH---------EDLSGTVLDL-QGPASAAHRRFLD----TGLSGRAQVVVG--SFF 229 (332)
T ss_dssp GSEEEEETCTTS----HHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHHH----TTCTTTEEEEEC--CTT
T ss_pred CCEEEEeCCChh----HHHHHHHHHC---------CCCeEEEecC-HHHHHHHHHhhhh----cCcCcCeEEecC--CCC
Confidence 579999999999 4555666543 4679999988 7777777666543 343 3566532 111
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCCC
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREAS 331 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea~ 331 (459)
+.. +. .-++++. ...||++.+ .....+|+.+ +.|+|.- ++++|.-.+
T Consensus 230 ~~~------p~-----~~D~v~~--~~vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 230 DPL------PA-----GAGGYVL--SAVLHDWDD----LSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp SCC------CC-----SCSEEEE--ESCGGGSCH----HHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred CCC------CC-----CCcEEEE--ehhhccCCH----HHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 111 11 1234433 344788732 2466778777 5689984 556665433
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.03 E-value=0.27 Score=48.75 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=70.3
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
...|++.+.-.+ .-+|+|+|.|.|. +...|+.+. |.+++|+++. +..++.+.+++.+ .|++
T Consensus 179 ~~~l~~~~~~~~-~~~vLDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~~----~~~~ 239 (359)
T 1x19_A 179 IQLLLEEAKLDG-VKKMIDVGGGIGD----ISAAMLKHF---------PELDSTILNL-PGAIDLVNENAAE----KGVA 239 (359)
T ss_dssp HHHHHHHCCCTT-CCEEEEESCTTCH----HHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHHH----TTCT
T ss_pred HHHHHHhcCCCC-CCEEEEECCcccH----HHHHHHHHC---------CCCeEEEEec-HHHHHHHHHHHHh----cCCC
Confidence 356777765444 6799999999986 445555432 3679999998 7777777666543 3442
Q ss_pred --EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCe-EEEEecCC
Q 048299 257 --FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRV-VTIAEREA 330 (459)
Q Consensus 257 --FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~i-v~~~E~ea 330 (459)
.+|.. . +..... +..+++++.+.. ||++.+ .....+|+.++ .|+|.- ++++|...
T Consensus 240 ~~v~~~~--~-d~~~~~----------~~~~D~v~~~~v--lh~~~d----~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 240 DRMRGIA--V-DIYKES----------YPEADAVLFCRI--LYSANE----QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp TTEEEEE--C-CTTTSC----------CCCCSEEEEESC--GGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred CCEEEEe--C-ccccCC----------CCCCCEEEEech--hccCCH----HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 56552 2 111111 222355555444 788732 24667777775 689984 55667543
No 16
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.87 E-value=0.14 Score=57.40 Aligned_cols=125 Identities=12% Similarity=0.160 Sum_probs=77.6
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHH--HHcC
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFA--QSLG 254 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA--~~lg 254 (459)
-+.|++.+...+ .-.|+|+|.|.| .+...|+.+ ++|.-+||||+.+...++.+.++|.... +..|
T Consensus 710 le~LLelL~~~~-g~rVLDVGCGTG----~lai~LAr~--------g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~g 776 (950)
T 3htx_A 710 VEYALKHIRESS-ASTLVDFGCGSG----SLLDSLLDY--------PTSLQTIIGVDISPKGLARAAKMLHVKLNKEACN 776 (950)
T ss_dssp HHHHHHHHHHSC-CSEEEEETCSSS----HHHHHHTSS--------CCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHhcccC-CCEEEEECCCCC----HHHHHHHHh--------CCCCCeEEEEECCHHHHHHHHHHhhhccchhhcC
Confidence 344566666555 668999999998 455566543 3466799999999999999988887652 2334
Q ss_pred Ce-EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHH-HHhcCCCeEEEEecCCC
Q 048299 255 LR-FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHK-IKALNPRVVTIAEREAS 331 (459)
Q Consensus 255 vp-FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~-ir~L~P~iv~~~E~ea~ 331 (459)
++ .+|. .. +...+. +....=++|+. ...|||+.+ .....+++. .+-|+|.++++...+.+
T Consensus 777 l~nVefi--qG-Da~dLp--------~~d~sFDlVV~--~eVLeHL~d----p~l~~~L~eI~RvLKPG~LIISTPN~e 838 (950)
T 3htx_A 777 VKSATLY--DG-SILEFD--------SRLHDVDIGTC--LEVIEHMEE----DQACEFGEKVLSLFHPKLLIVSTPNYE 838 (950)
T ss_dssp CSEEEEE--ES-CTTSCC--------TTSCSCCEEEE--ESCGGGSCH----HHHHHHHHHHHHTTCCSEEEEEECBGG
T ss_pred CCceEEE--EC-chHhCC--------cccCCeeEEEE--eCchhhCCh----HHHHHHHHHHHHHcCCCEEEEEecCch
Confidence 43 4444 22 232222 11111134444 445799843 245567766 47899997777776644
No 17
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.35 E-value=0.63 Score=45.17 Aligned_cols=117 Identities=21% Similarity=0.167 Sum_probs=70.8
Q ss_pred HHHHHHhhh--CCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 178 QAILESLQV--GQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 178 qAILEA~~g--~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
..|++.+.. .+ ..+|+|+|.+.|. +...|+.+. |..++|+++.+ ..++.+.+++.+ .|+
T Consensus 153 ~~~~~~~~~~~~~-~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~~-~~~~~a~~~~~~----~~~ 213 (335)
T 2r3s_A 153 QLIAQLVNENKIE-PLKVLDISASHGL----FGIAVAQHN---------PNAEIFGVDWA-SVLEVAKENARI----QGV 213 (335)
T ss_dssp HHHHHHHTC--CC-CSEEEEETCTTCH----HHHHHHHHC---------TTCEEEEEECH-HHHHHHHHHHHH----HTC
T ss_pred HHHHHhcccccCC-CCEEEEECCCcCH----HHHHHHHHC---------CCCeEEEEecH-HHHHHHHHHHHh----cCC
Confidence 467777764 54 7899999999984 455565543 34699999988 888877766643 344
Q ss_pred e--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCCC
Q 048299 256 R--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREAS 331 (459)
Q Consensus 256 p--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea~ 331 (459)
+ .+|... +..... +..+ .=+|-|...||++.+ .....+|+.+ +.|+|.- ++++|...+
T Consensus 214 ~~~v~~~~~---d~~~~~----------~~~~-~D~v~~~~~l~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 214 ASRYHTIAG---SAFEVD----------YGND-YDLVLLPNFLHHFDV----ATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GGGEEEEES---CTTTSC----------CCSC-EEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred CcceEEEec---ccccCC----------CCCC-CcEEEEcchhccCCH----HHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 3 565522 121111 1112 223334445788732 2456777776 4689986 666776543
No 18
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.29 E-value=0.44 Score=46.88 Aligned_cols=118 Identities=15% Similarity=0.097 Sum_probs=66.9
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--e
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--R 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--p 256 (459)
.|++.+.-.+...+|+|+|.|.|. +...|+.+- |.+++|+++. ...++.+.+++. ..++ .
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a~~~~~----~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---------PQLTGQIWDL-PTTRDAARKTIH----AHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---------TTCEEEEEEC-GGGHHHHHHHHH----HTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---------CCCeEEEEEC-HHHHHHHHHHHH----hcCCCCc
Confidence 566665433226799999999985 555666533 3589999988 556665555443 3454 2
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCC
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREA 330 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea 330 (459)
.+|.. .+ ..... . ..++.+=+|-|...||++.+ .....+|+.+ +.|+|.- ++++|.-.
T Consensus 231 v~~~~--~d-~~~~~-------~--~~~~~~D~v~~~~vlh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 231 VEFFE--KN-LLDAR-------N--FEGGAADVVMLNDCLHYFDA----REAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp EEEEE--CC-TTCGG-------G--GTTCCEEEEEEESCGGGSCH----HHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred eEEEe--CC-cccCc-------c--cCCCCccEEEEecccccCCH----HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 55552 21 11111 0 01122323444455788832 2466778777 5689984 55566543
No 19
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=94.14 E-value=0.66 Score=42.95 Aligned_cols=128 Identities=12% Similarity=-0.020 Sum_probs=71.4
Q ss_pred hccCCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHH
Q 048299 163 NQITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRT 242 (459)
Q Consensus 163 ~~~~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~et 242 (459)
++..+-..-.+......+++.+.+-+..-+|+|+|.|.|. +...|+.+.+ . ++|||+.+...++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~~---------~-~v~~vD~s~~~~~~a 85 (257)
T 3f4k_A 20 FKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYVK---------G-QITGIDLFPDFIEIF 85 (257)
T ss_dssp HTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHCC---------S-EEEEEESCHHHHHHH
T ss_pred HcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhCC---------C-eEEEEECCHHHHHHH
Confidence 3333433344444455566665432225589999999885 4445554432 2 999999998888776
Q ss_pred HHHHHHHHHHcCCe--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcC
Q 048299 243 GERLLKFAQSLGLR--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALN 319 (459)
Q Consensus 243 g~rL~~fA~~lgvp--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~ 319 (459)
.+++ +..|++ .+|.. . +.+.+. ..++..=+|-|...+||+ + .+.+|+.+ +-|+
T Consensus 86 ~~~~----~~~~~~~~~~~~~--~-d~~~~~----------~~~~~fD~v~~~~~l~~~--~-----~~~~l~~~~~~L~ 141 (257)
T 3f4k_A 86 NENA----VKANCADRVKGIT--G-SMDNLP----------FQNEELDLIWSEGAIYNI--G-----FERGMNEWSKYLK 141 (257)
T ss_dssp HHHH----HHTTCTTTEEEEE--C-CTTSCS----------SCTTCEEEEEEESCSCCC--C-----HHHHHHHHHTTEE
T ss_pred HHHH----HHcCCCCceEEEE--C-ChhhCC----------CCCCCEEEEEecChHhhc--C-----HHHHHHHHHHHcC
Confidence 6554 455665 56552 2 222221 122322233344447877 2 34566666 4689
Q ss_pred CCeE-EEEec
Q 048299 320 PRVV-TIAER 328 (459)
Q Consensus 320 P~iv-~~~E~ 328 (459)
|.-. ++.+.
T Consensus 142 pgG~l~~~~~ 151 (257)
T 3f4k_A 142 KGGFIAVSEA 151 (257)
T ss_dssp EEEEEEEEEE
T ss_pred CCcEEEEEEe
Confidence 9854 44453
No 20
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=93.90 E-value=0.37 Score=48.32 Aligned_cols=110 Identities=16% Similarity=0.153 Sum_probs=62.0
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..|++.+.+-+..-+|+|+|.|.|. +...|+.+- |.+++|+++. +..++.+ +.. -..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a--------~~~-~~v 248 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---------PSINAINFDL-PHVIQDA--------PAF-SGV 248 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-HHHHTTC--------CCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---------CCCEEEEEeh-HHHHHhh--------hhc-CCC
Confidence 4466665532226799999999985 455555433 4678999987 4444322 211 124
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCC
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREA 330 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea 330 (459)
+|.. .+-.+.+ + .+++++.+.. ||++.+ .....+|+.+ +.|+|.- ++++|.-.
T Consensus 249 ~~~~--~d~~~~~------p------~~D~v~~~~v--lh~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 249 EHLG--GDMFDGV------P------KGDAIFIKWI--CHDWSD----EHCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp EEEE--CCTTTCC------C------CCSEEEEESC--GGGBCH----HHHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred EEEe--cCCCCCC------C------CCCEEEEech--hhcCCH----HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 4442 2111111 1 2356555444 788843 2456778877 4789984 66666543
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.89 E-value=0.38 Score=42.99 Aligned_cols=106 Identities=16% Similarity=0.092 Sum_probs=59.8
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEE
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQF 259 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF 259 (459)
++..+.... .-.|+|+|.|.|. +...|+.+ + . ++|||+.+...++.+.++. -..+|
T Consensus 33 ~l~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~------~----~v~gvD~s~~~~~~a~~~~--------~~~~~ 88 (203)
T 3h2b_A 33 LIEPWATGV-DGVILDVGSGTGR----WTGHLASL-G------H----QIEGLEPATRLVELARQTH--------PSVTF 88 (203)
T ss_dssp HHHHHHHHC-CSCEEEETCTTCH----HHHHHHHT-T------C----CEEEECCCHHHHHHHHHHC--------TTSEE
T ss_pred HHHHHhccC-CCeEEEecCCCCH----HHHHHHhc-C------C----eEEEEeCCHHHHHHHHHhC--------CCCeE
Confidence 334443333 4579999999986 55566654 4 2 8999999887777665541 12333
Q ss_pred EEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 260 HPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 260 ~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
. .. +... +...++..=+|-|...|||+..+ ....+|+.+ +.|+|.-.+++
T Consensus 89 ~--~~-d~~~----------~~~~~~~fD~v~~~~~l~~~~~~----~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 89 H--HG-TITD----------LSDSPKRWAGLLAWYSLIHMGPG----ELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp E--CC-CGGG----------GGGSCCCEEEEEEESSSTTCCTT----THHHHHHHHHHTEEEEEEEEE
T ss_pred E--eC-cccc----------cccCCCCeEEEEehhhHhcCCHH----HHHHHHHHHHHHcCCCcEEEE
Confidence 3 11 1111 12223323334444568888432 356677666 56899854444
No 22
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=93.69 E-value=0.74 Score=43.28 Aligned_cols=104 Identities=19% Similarity=0.179 Sum_probs=60.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++. ..|++ .+|.. . +..
T Consensus 38 ~~~vLDiG~G~G~----~~~~l~~~~---------~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~~--~-d~~ 97 (276)
T 3mgg_A 38 GAKVLEAGCGIGA----QTVILAKNN---------PDAEITSIDISPESLEKARENTE----KNGIKNVKFLQ--A-NIF 97 (276)
T ss_dssp TCEEEETTCTTSH----HHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHH----HTTCCSEEEEE--C-CGG
T ss_pred CCeEEEecCCCCH----HHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE--c-ccc
Confidence 5589999999883 445565542 24599999999888877666543 34553 44442 1 111
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecC
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAERE 329 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~e 329 (459)
.+ ...++..=+|-|...|||+ .+ .+.+|+.+ +-|+|.-+ ++++.+
T Consensus 98 ~~----------~~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 98 SL----------PFEDSSFDHIFVCFVLEHL-QS-----PEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp GC----------CSCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cC----------CCCCCCeeEEEEechhhhc-CC-----HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 11 1222333344445557887 33 34666666 56899854 454543
No 23
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.57 E-value=0.66 Score=45.92 Aligned_cols=113 Identities=22% Similarity=0.195 Sum_probs=67.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
..|++.+.-.+ ..+|+|+|.|.| .+...|+.+. |.+++|+++. ...++.+.+++. ..|++
T Consensus 172 ~~~~~~~~~~~-~~~vlDvG~G~G----~~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~ 232 (374)
T 1qzz_A 172 EAPADAYDWSA-VRHVLDVGGGNG----GMLAAIALRA---------PHLRGTLVEL-AGPAERARRRFA----DAGLAD 232 (374)
T ss_dssp HHHHHTSCCTT-CCEEEEETCTTS----HHHHHHHHHC---------TTCEEEEEEC-HHHHHHHHHHHH----HTTCTT
T ss_pred HHHHHhCCCCC-CCEEEEECCCcC----HHHHHHHHHC---------CCCEEEEEeC-HHHHHHHHHHHH----hcCCCC
Confidence 45666654444 679999999999 4555565532 3679999998 777777766654 33543
Q ss_pred -EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEec
Q 048299 257 -FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAER 328 (459)
Q Consensus 257 -FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ 328 (459)
.+|.. .+-.+.+ + ...=+|-|...||++.+ .....+|+.+ +.|+|.- ++++|.
T Consensus 233 ~v~~~~--~d~~~~~------~-------~~~D~v~~~~vl~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 233 RVTVAE--GDFFKPL------P-------VTADVVLLSFVLLNWSD----EDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp TEEEEE--CCTTSCC------S-------CCEEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEEe--CCCCCcC------C-------CCCCEEEEeccccCCCH----HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 56552 2111211 1 11223334444788732 2345677776 5689985 566676
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=93.44 E-value=0.66 Score=41.88 Aligned_cols=111 Identities=18% Similarity=0.166 Sum_probs=64.4
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
.-..+++.+...+ .-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. -++
T Consensus 33 ~~~~~l~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~-----~~~ 91 (220)
T 3hnr_A 33 HYEDILEDVVNKS-FGNVLEFGVGTGN----LTNKLLLA-G----------RTVYGIEPSREMRMIAKEKLP-----KEF 91 (220)
T ss_dssp THHHHHHHHHHTC-CSEEEEECCTTSH----HHHHHHHT-T----------CEEEEECSCHHHHHHHHHHSC-----TTC
T ss_pred HHHHHHHHhhccC-CCeEEEeCCCCCH----HHHHHHhC-C----------CeEEEEeCCHHHHHHHHHhCC-----Cce
Confidence 3457777777665 7799999999984 55556654 3 289999998877776655433 133
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEe
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAE 327 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E 327 (459)
+|. . .+...+. +. ..=+.++.+ ..|||+.+. ....+|+.+ +.|+|.-. ++++
T Consensus 92 --~~~--~-~d~~~~~--------~~-~~fD~v~~~--~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 92 --SIT--E-GDFLSFE--------VP-TSIDTIVST--YAFHHLTDD----EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp --CEE--S-CCSSSCC--------CC-SCCSEEEEE--SCGGGSCHH----HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred --EEE--e-CChhhcC--------CC-CCeEEEEEC--cchhcCChH----HHHHHHHHHHHhcCCCCEEEEEe
Confidence 332 1 1222221 11 112444444 447888321 233466665 57899854 4444
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=93.40 E-value=1.1 Score=40.30 Aligned_cols=109 Identities=21% Similarity=0.194 Sum_probs=62.3
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
...+.+.+..-+..-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ ++.
T Consensus 31 ~~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~-------~~~ 88 (211)
T 3e23_A 31 SATLTKFLGELPAGAKILELGCGAGY----QAEAMLAA-G----------FDVDATDGSPELAAEASRRL-------GRP 88 (211)
T ss_dssp CHHHHHHHTTSCTTCEEEESSCTTSH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHHH-------TSC
T ss_pred hHHHHHHHHhcCCCCcEEEECCCCCH----HHHHHHHc-C----------CeEEEECCCHHHHHHHHHhc-------CCc
Confidence 44444444332224579999999885 55566654 3 28999999988887776665 444
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
|.-. +.+. +. .++..=+|-|...|||+..+ ....+|+.+ +.|+|.-++++.
T Consensus 89 ~~~~-----d~~~----------~~-~~~~fD~v~~~~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 89 VRTM-----LFHQ----------LD-AIDAYDAVWAHACLLHVPRD----ELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp CEEC-----CGGG----------CC-CCSCEEEEEECSCGGGSCHH----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEe-----eecc----------CC-CCCcEEEEEecCchhhcCHH----HHHHHHHHHHHhcCCCcEEEEE
Confidence 3321 1111 11 12222234445557888422 456677776 568998655553
No 26
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=93.30 E-value=0.66 Score=45.71 Aligned_cols=114 Identities=22% Similarity=0.199 Sum_probs=65.7
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-- 255 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-- 255 (459)
..|++.+.-.+ .-+|+|+|.|.|. +...|+.+. |.+++|+++. ...++.+.+++. ..|+
T Consensus 173 ~~l~~~~~~~~-~~~vLDvG~G~G~----~~~~l~~~~---------~~~~~~~~D~-~~~~~~a~~~~~----~~~~~~ 233 (360)
T 1tw3_A 173 DAPAAAYDWTN-VRHVLDVGGGKGG----FAAAIARRA---------PHVSATVLEM-AGTVDTARSYLK----DEGLSD 233 (360)
T ss_dssp HHHHHHSCCTT-CSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-TTHHHHHHHHHH----HTTCTT
T ss_pred HHHHHhCCCcc-CcEEEEeCCcCcH----HHHHHHHhC---------CCCEEEEecC-HHHHHHHHHHHH----hcCCCC
Confidence 45677665444 6799999999984 445555432 4679999997 666666655543 3455
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
.++|.. .+-.+.+ + +..=+|-+...||++.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 234 ~v~~~~--~d~~~~~------~-------~~~D~v~~~~vl~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 234 RVDVVE--GDFFEPL------P-------RKADAIILSFVLLNWPD----HDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp TEEEEE--CCTTSCC------S-------SCEEEEEEESCGGGSCH----HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ceEEEe--CCCCCCC------C-------CCccEEEEcccccCCCH----HHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 366652 2211211 1 11222333444788732 2345677776 4689985 5566654
No 27
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=93.30 E-value=0.31 Score=44.27 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=60.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC------eEEEEEee
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL------RFQFHPLL 263 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv------pFeF~~v~ 263 (459)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++ ++..++ ..+|..
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~-- 89 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-G----------YSVTGIDINSEAIRLAETA----ARSPGLNQKTGGKAEFKV-- 89 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHH----TTCCSCCSSSSCEEEEEE--
T ss_pred CCeEEEECCCCCH----HHHHHHhC-C----------CeEEEEECCHHHHHHHHHH----HHhcCCccccCcceEEEE--
Confidence 4479999999884 44555554 3 2899999988777665443 333454 345542
Q ss_pred cCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCCCC
Q 048299 264 LMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREASH 332 (459)
Q Consensus 264 ~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea~~ 332 (459)
. +...+. ..++..=+|-|...|||+.+ ...+..+|+.+ +.|+|.- +++++...+.
T Consensus 90 ~-d~~~~~----------~~~~~~D~v~~~~~l~~~~~---~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 90 E-NASSLS----------FHDSSFDFAVMQAFLTSVPD---PKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp C-CTTSCC----------SCTTCEEEEEEESCGGGCCC---HHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred e-cccccC----------CCCCceeEEEEcchhhcCCC---HHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 1 222211 12232223334455788732 22355777776 5689984 4555554443
No 28
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.20 E-value=2.4 Score=38.99 Aligned_cols=113 Identities=13% Similarity=0.204 Sum_probs=64.7
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-E
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-F 257 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-F 257 (459)
-+++.+.-.+ .-+|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++.+ .|++ +
T Consensus 12 ~~~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~-------~---~v~~vD~s~~~~~~a~~~~~~----~~~~~v 71 (239)
T 1xxl_A 12 LMIKTAECRA-EHRVLDIGAGAGH----TALAFSPY-V-------Q---ECIGVDATKEMVEVASSFAQE----KGVENV 71 (239)
T ss_dssp HHHHHHTCCT-TCEEEEESCTTSH----HHHHHGGG-S-------S---EEEEEESCHHHHHHHHHHHHH----HTCCSE
T ss_pred hHHHHhCcCC-CCEEEEEccCcCH----HHHHHHHh-C-------C---EEEEEECCHHHHHHHHHHHHH----cCCCCe
Confidence 3445555554 6689999999885 44455543 2 2 899999998888776665543 3443 5
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecCC
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAEREA 330 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ea 330 (459)
+|.. . +.+.+. ..++..=+|-|...+||+ .+ ...+|+.+ +-|+|.-. ++++...
T Consensus 72 ~~~~--~-d~~~~~----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 72 RFQQ--G-TAESLP----------FPDDSFDIITCRYAAHHF-SD-----VRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EEEE--C-BTTBCC----------SCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEe--c-ccccCC----------CCCCcEEEEEECCchhhc-cC-----HHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 5542 1 222221 222323234445557887 33 34555555 67899854 4445443
No 29
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=93.15 E-value=0.42 Score=44.19 Aligned_cols=114 Identities=16% Similarity=0.125 Sum_probs=64.6
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..+++.+...+ .-+|+|+|.|.|. +...|+.+. ..++|+|+.+...++.+.+++... -..
T Consensus 83 ~~~l~~l~~~~-~~~vLDiG~G~G~----~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~-----~~~ 142 (254)
T 1xtp_A 83 RNFIASLPGHG-TSRALDCGAGIGR----ITKNLLTKL----------YATTDLLEPVKHMLEEAKRELAGM-----PVG 142 (254)
T ss_dssp HHHHHTSTTCC-CSEEEEETCTTTH----HHHHTHHHH----------CSEEEEEESCHHHHHHHHHHTTTS-----SEE
T ss_pred HHHHHhhcccC-CCEEEEECCCcCH----HHHHHHHhh----------cCEEEEEeCCHHHHHHHHHHhccC-----Cce
Confidence 45666665454 6789999999886 334444332 237999999988887766654332 234
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEec
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAER 328 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ 328 (459)
+|.. . +.+.+ ...++..=+|-|...|||+.++ ....+|+.+ +.|+|.-+ ++++.
T Consensus 143 ~~~~--~-d~~~~----------~~~~~~fD~v~~~~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 143 KFIL--A-SMETA----------TLPPNTYDLIVIQWTAIYLTDA----DFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEE--S-CGGGC----------CCCSSCEEEEEEESCGGGSCHH----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEE--c-cHHHC----------CCCCCCeEEEEEcchhhhCCHH----HHHHHHHHHHHhcCCCeEEEEEec
Confidence 4442 1 12111 1222322233344457888422 456666665 57899854 44443
No 30
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=93.04 E-value=0.43 Score=47.76 Aligned_cols=110 Identities=13% Similarity=0.110 Sum_probs=62.2
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..|++.+.+-+..-+|+|+|.|.|. +...|+.+- |.+++|+++. +..++.+ +.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a--------~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---------PTIKGVNFDL-PHVISEA--------PQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-HHHHTTC--------CCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---------CCCeEEEecC-HHHHHhh--------hhc-CCe
Confidence 4577776633336799999999985 445555432 4678999987 4444332 221 134
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCe-EEEEecCC
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRV-VTIAEREA 330 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~i-v~~~E~ea 330 (459)
+|.. .+-.+.+ + .+++++... .||++.+ .....+|+.++ .|+|.- ++++|.-.
T Consensus 247 ~~~~--~D~~~~~------p------~~D~v~~~~--vlh~~~d----~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 247 THVG--GDMFKEV------P------SGDTILMKW--ILHDWSD----QHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EEEE--CCTTTCC------C------CCSEEEEES--CGGGSCH----HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred EEEe--CCcCCCC------C------CCCEEEehH--HhccCCH----HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 4442 2111111 1 235554444 4788843 24667788774 689984 56666543
No 31
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=93.02 E-value=0.28 Score=44.58 Aligned_cols=119 Identities=16% Similarity=0.221 Sum_probs=70.8
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-- 255 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-- 255 (459)
+.|++.+...+ .-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++.. .++
T Consensus 19 ~~l~~~l~~~~-~~~vLDiGcG~G~----~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~----~~~~~ 80 (219)
T 3jwg_A 19 GTVVAVLKSVN-AKKVIDLGCGEGN----LLSLLLKDK---------SFEQITGVDVSYSVLERAKDRLKI----DRLPE 80 (219)
T ss_dssp HHHHHHHHHTT-CCEEEEETCTTCH----HHHHHHTST---------TCCEEEEEESCHHHHHHHHHHHTG----GGSCH
T ss_pred HHHHHHHhhcC-CCEEEEecCCCCH----HHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHHHh----hcccc
Confidence 45556665555 6689999999985 555666532 347999999998888877776532 222
Q ss_pred ----eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecCC
Q 048299 256 ----RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAEREA 330 (459)
Q Consensus 256 ----pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ea 330 (459)
.++|.. . +.+... .....=++|+ |...|||+.+ ..+..+|+.+ +.|+|.-+++.....
T Consensus 81 ~~~~~v~~~~--~-d~~~~~--------~~~~~fD~V~--~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~~i~~~~~ 143 (219)
T 3jwg_A 81 MQRKRISLFQ--S-SLVYRD--------KRFSGYDAAT--VIEVIEHLDE----NRLQAFEKVLFEFTRPQTVIVSTPNK 143 (219)
T ss_dssp HHHTTEEEEE--C-CSSSCC--------GGGTTCSEEE--EESCGGGCCH----HHHHHHHHHHHTTTCCSEEEEEEEBG
T ss_pred ccCcceEEEe--C-cccccc--------cccCCCCEEE--EHHHHHhCCH----HHHHHHHHHHHHhhCCCEEEEEccch
Confidence 344442 1 222221 1001113433 4445788832 2456777776 578999877766554
Q ss_pred C
Q 048299 331 S 331 (459)
Q Consensus 331 ~ 331 (459)
.
T Consensus 144 ~ 144 (219)
T 3jwg_A 144 E 144 (219)
T ss_dssp G
T ss_pred h
Confidence 3
No 32
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=92.73 E-value=1.4 Score=41.22 Aligned_cols=114 Identities=21% Similarity=0.212 Sum_probs=64.6
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
..|++.+.-.+ .-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+++ +..|++
T Consensus 51 ~~l~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~~~----------~~v~gvD~s~~~~~~a~~~~----~~~~~~~ 111 (273)
T 3bus_A 51 DEMIALLDVRS-GDRVLDVGCGIGK----PAVRLATARD----------VRVTGISISRPQVNQANARA----TAAGLAN 111 (273)
T ss_dssp HHHHHHSCCCT-TCEEEEESCTTSH----HHHHHHHHSC----------CEEEEEESCHHHHHHHHHHH----HHTTCTT
T ss_pred HHHHHhcCCCC-CCEEEEeCCCCCH----HHHHHHHhcC----------CEEEEEeCCHHHHHHHHHHH----HhcCCCc
Confidence 34555554344 5689999988875 4445554433 48999999988887665554 344553
Q ss_pred -EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 257 -FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 257 -FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
.+|.. . +.+.+. ..++..=+|-+...|||+ .+ ...+|+.+ +-|+|.- +++.+..
T Consensus 112 ~~~~~~--~-d~~~~~----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 112 RVTFSY--A-DAMDLP----------FEDASFDAVWALESLHHM-PD-----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TEEEEE--C-CTTSCC----------SCTTCEEEEEEESCTTTS-SC-----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ceEEEE--C-ccccCC----------CCCCCccEEEEechhhhC-CC-----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 55542 1 222221 122322233344457887 32 35677766 4689984 4444543
No 33
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.37 E-value=0.94 Score=40.98 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=69.0
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC---
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--- 255 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--- 255 (459)
.|++.+...+ .-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++. ..++
T Consensus 20 ~l~~~l~~~~-~~~vLDiGcG~G~----~~~~l~~~~---------~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~ 81 (217)
T 3jwh_A 20 GVVAALKQSN-ARRVIDLGCGQGN----LLKILLKDS---------FFEQITGVDVSYRSLEIAQERLD----RLRLPRN 81 (217)
T ss_dssp HHHHHHHHTT-CCEEEEETCTTCH----HHHHHHHCT---------TCSEEEEEESCHHHHHHHHHHHT----TCCCCHH
T ss_pred HHHHHHHhcC-CCEEEEeCCCCCH----HHHHHHhhC---------CCCEEEEEECCHHHHHHHHHHHH----HhcCCcc
Confidence 4555555454 5689999999985 555566543 24699999999888887776643 2333
Q ss_pred ---eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCeEEEEecC
Q 048299 256 ---RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRVVTIAERE 329 (459)
Q Consensus 256 ---pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~iv~~~E~e 329 (459)
.++|.. . +..... .....=++++ |...|||+.+ ..+..+|+.++ .|+|.-++++...
T Consensus 82 ~~~~v~~~~--~-d~~~~~--------~~~~~fD~v~--~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 82 QWERLQLIQ--G-ALTYQD--------KRFHGYDAAT--VIEVIEHLDL----SRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp HHTTEEEEE--C-CTTSCC--------GGGCSCSEEE--EESCGGGCCH----HHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCcceEEEe--C-Cccccc--------ccCCCcCEEe--eHHHHHcCCH----HHHHHHHHHHHHHcCCCEEEEEccC
Confidence 255542 2 222221 1101113444 4444788832 24677888775 6899987666544
No 34
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=91.88 E-value=2.8 Score=40.10 Aligned_cols=146 Identities=14% Similarity=0.052 Sum_probs=77.5
Q ss_pred HHHhhccCCCcchhhHhHHHHHHHH----hhhCCceEEEEEcccCC---CCCcHHHHHHHhhcccCCCCCCCCCeEEEeE
Q 048299 159 YLSLNQITPFIRFSHLTANQAILES----LQVGQQSIHILDFDIMH---GVQWPPLMQALVERFKNSNMLQPPPMLRITG 231 (459)
Q Consensus 159 ~~~f~~~~P~~kfa~ftaNqAILEA----~~g~~~~VHIIDf~I~~---G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~ 231 (459)
...+.++.|-+. .....|+..++. +......-+|+|+|.|. |. + .+.+.. .. |..+||+
T Consensus 44 ~~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~---~~~~~~-~~--------p~~~v~~ 109 (274)
T 2qe6_A 44 ADYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-T---HEVAQS-VN--------PDARVVY 109 (274)
T ss_dssp HHHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-H---HHHHHH-HC--------TTCEEEE
T ss_pred HHHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-H---HHHHHH-hC--------CCCEEEE
Confidence 344555566543 233556655553 33222134899999998 73 3 233322 22 3479999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCcccccccc-ccccCCCCeEEEehhhhhhhhccCCCChhHHH
Q 048299 232 TGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTSVAFYLPS-ALTILPDETLAVNCMLFLHKLLKDHDTRDLRL 310 (459)
Q Consensus 232 i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~~~~~l~~-~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~ 310 (459)
|+.++..++...+++.. .-..+|.. . +..+..+....+. .-.+..+...+|-+...||++.++ ....
T Consensus 110 vD~sp~~l~~Ar~~~~~-----~~~v~~~~--~-D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~----~~~~ 177 (274)
T 2qe6_A 110 VDIDPMVLTHGRALLAK-----DPNTAVFT--A-DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD----VVDR 177 (274)
T ss_dssp EESSHHHHHHHHHHHTT-----CTTEEEEE--C-CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT----THHH
T ss_pred EECChHHHHHHHHhcCC-----CCCeEEEE--e-eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH----HHHH
Confidence 99998888877777632 11344442 2 2222110000000 001222345566666778999432 4667
Q ss_pred HHHHHHh-cCCC-eEEEEecCC
Q 048299 311 FLHKIKA-LNPR-VVTIAEREA 330 (459)
Q Consensus 311 ~L~~ir~-L~P~-iv~~~E~ea 330 (459)
+|+.+++ |+|. .+++.+...
T Consensus 178 ~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 178 VVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHHHHSCTTCEEEEEEEBC
T ss_pred HHHHHHHhCCCCcEEEEEEecC
Confidence 8887765 9998 455555543
No 35
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=91.85 E-value=2.2 Score=41.06 Aligned_cols=112 Identities=17% Similarity=0.207 Sum_probs=63.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-- 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-- 256 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+.+.+ . ++|||+.+...++.+.+++. ..|++
T Consensus 81 ~~~~~~~~~~-~~~vLDiGcG~G~----~~~~la~~~~------~----~v~gvD~s~~~~~~a~~~~~----~~~~~~~ 141 (318)
T 2fk8_A 81 LNLDKLDLKP-GMTLLDIGCGWGT----TMRRAVERFD------V----NVIGLTLSKNQHARCEQVLA----SIDTNRS 141 (318)
T ss_dssp HHHTTSCCCT-TCEEEEESCTTSH----HHHHHHHHHC------C----EEEEEESCHHHHHHHHHHHH----TSCCSSC
T ss_pred HHHHhcCCCC-cCEEEEEcccchH----HHHHHHHHCC------C----EEEEEECCHHHHHHHHHHHH----hcCCCCc
Confidence 3444443333 5689999988874 4555665544 2 89999999888877665543 34543
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
.+|. .. +.++ +. ..=++|+.+ ..|||+..+ ....+|+.+ +-|+|.- +++.+..
T Consensus 142 v~~~--~~-d~~~----------~~-~~fD~v~~~--~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 196 (318)
T 2fk8_A 142 RQVL--LQ-GWED----------FA-EPVDRIVSI--EAFEHFGHE----NYDDFFKRCFNIMPADGRMTVQSSV 196 (318)
T ss_dssp EEEE--ES-CGGG----------CC-CCCSEEEEE--SCGGGTCGG----GHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred eEEE--EC-ChHH----------CC-CCcCEEEEe--ChHHhcCHH----HHHHHHHHHHHhcCCCcEEEEEEec
Confidence 4444 21 1111 11 111344443 347888432 456667665 5789984 4444443
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=91.07 E-value=1.5 Score=42.27 Aligned_cols=110 Identities=15% Similarity=0.049 Sum_probs=62.7
Q ss_pred HHHHHhh-hCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 179 AILESLQ-VGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 179 AILEA~~-g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
.|++.+. -.. .-+|+|+|.|.| .+...|+.+.+ .++|||+.+...++.+.+++ +..|++
T Consensus 107 ~l~~~l~~~~~-~~~vLDiGcG~G----~~~~~la~~~~----------~~v~gvD~s~~~~~~a~~~~----~~~~~~~ 167 (312)
T 3vc1_A 107 FLMDHLGQAGP-DDTLVDAGCGRG----GSMVMAHRRFG----------SRVEGVTLSAAQADFGNRRA----RELRIDD 167 (312)
T ss_dssp HHHTTSCCCCT-TCEEEEESCTTS----HHHHHHHHHHC----------CEEEEEESCHHHHHHHHHHH----HHTTCTT
T ss_pred HHHHHhccCCC-CCEEEEecCCCC----HHHHHHHHHcC----------CEEEEEeCCHHHHHHHHHHH----HHcCCCC
Confidence 3555554 222 568999999887 34555665543 37999999988887766654 445654
Q ss_pred -EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEe
Q 048299 257 -FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAE 327 (459)
Q Consensus 257 -FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E 327 (459)
.+|.. . +.+.+. ..++..=+|-|...+||+ + ...+|+.+ +-|+|.-. ++++
T Consensus 168 ~v~~~~--~-d~~~~~----------~~~~~fD~V~~~~~l~~~-~------~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 168 HVRSRV--C-NMLDTP----------FDKGAVTASWNNESTMYV-D------LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TEEEEE--C-CTTSCC----------CCTTCEEEEEEESCGGGS-C------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEE--C-ChhcCC----------CCCCCEeEEEECCchhhC-C------HHHHHHHHHHHcCCCcEEEEEE
Confidence 66552 2 222221 112222233334446777 2 44566655 57899854 4444
No 37
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=90.72 E-value=0.95 Score=44.67 Aligned_cols=112 Identities=10% Similarity=0.053 Sum_probs=61.5
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-- 255 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-- 255 (459)
..|++.+.-.+ .-+|+|+|.|.|. +...|+.+- |.+++|+++.+. .+. .+.++..++
T Consensus 174 ~~~~~~~~~~~-~~~vLDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~~~-~~~------~~~~~~~~~~~ 232 (348)
T 3lst_A 174 LILARAGDFPA-TGTVADVGGGRGG----FLLTVLREH---------PGLQGVLLDRAE-VVA------RHRLDAPDVAG 232 (348)
T ss_dssp HHHHHHSCCCS-SEEEEEETCTTSH----HHHHHHHHC---------TTEEEEEEECHH-HHT------TCCCCCGGGTT
T ss_pred HHHHHhCCccC-CceEEEECCccCH----HHHHHHHHC---------CCCEEEEecCHH-Hhh------cccccccCCCC
Confidence 35677665455 7899999999985 455555433 467999998742 222 111111222
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecCC
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAEREA 330 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~ea 330 (459)
..+|.. .+-.+.+ + .-++++.+. .||++.+ .....+|+.+ +.|+|.- ++++|.-.
T Consensus 233 ~v~~~~--~d~~~~~------p------~~D~v~~~~--vlh~~~d----~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 233 RWKVVE--GDFLREV------P------HADVHVLKR--ILHNWGD----EDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp SEEEEE--CCTTTCC------C------CCSEEEEES--CGGGSCH----HHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred CeEEEe--cCCCCCC------C------CCcEEEEeh--hccCCCH----HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 355552 2111111 1 223444444 4788732 2446777777 5689984 55666533
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=90.54 E-value=0.83 Score=43.25 Aligned_cols=111 Identities=13% Similarity=0.113 Sum_probs=62.7
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--e
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--R 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--p 256 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+.+.+ . ++|||+.+...++.+.+++. ..|+ .
T Consensus 55 ~~~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~~~------~----~v~gvd~s~~~~~~a~~~~~----~~~~~~~ 115 (287)
T 1kpg_A 55 LALGKLGLQP-GMTLLDVGCGWGA----TMMRAVEKYD------V----NVVGLTLSKNQANHVQQLVA----NSENLRS 115 (287)
T ss_dssp HHHTTTTCCT-TCEEEEETCTTSH----HHHHHHHHHC------C----EEEEEESCHHHHHHHHHHHH----TCCCCSC
T ss_pred HHHHHcCCCC-cCEEEEECCcccH----HHHHHHHHcC------C----EEEEEECCHHHHHHHHHHHH----hcCCCCC
Confidence 3444444344 5689999988775 5556665544 2 99999999888877666543 3444 3
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEec
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAER 328 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ 328 (459)
.+|. .. +.++ +. ..=++|+.+ ..|||+..+ ....+|+.+ +-|+|.-. ++.+.
T Consensus 116 ~~~~--~~-d~~~----------~~-~~fD~v~~~--~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 116 KRVL--LA-GWEQ----------FD-EPVDRIVSI--GAFEHFGHE----RYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EEEE--ES-CGGG----------CC-CCCSEEEEE--SCGGGTCTT----THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred eEEE--EC-Chhh----------CC-CCeeEEEEe--CchhhcChH----HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 4443 21 1111 11 111343333 347888432 355666665 57899844 44443
No 39
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=90.44 E-value=2.7 Score=39.62 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=67.3
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..+++.+...+ .-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ +..|+..
T Consensus 110 ~~~~~~~~~~~-~~~vLD~GcG~G~----~~~~l~~~-g----------~~v~~vD~s~~~~~~a~~~~----~~~~~~~ 169 (286)
T 3m70_A 110 GDVVDAAKIIS-PCKVLDLGCGQGR----NSLYLSLL-G----------YDVTSWDHNENSIAFLNETK----EKENLNI 169 (286)
T ss_dssp HHHHHHHHHSC-SCEEEEESCTTCH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHHH----HHTTCCE
T ss_pred HHHHHHhhccC-CCcEEEECCCCCH----HHHHHHHC-C----------CeEEEEECCHHHHHHHHHHH----HHcCCce
Confidence 46667776665 7789999999985 44556654 4 28999999988887766654 3456666
Q ss_pred EEEEeecCCCCCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEE
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTI 325 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~ 325 (459)
+|.. . +..... . ++ ++|+.|. .+||+.. ..+..+|+.+ +.|+|.-+++
T Consensus 170 ~~~~--~-d~~~~~----------~-~~~fD~i~~~~--~~~~~~~----~~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 170 STAL--Y-DINAAN----------I-QENYDFIVSTV--VFMFLNR----ERVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp EEEE--C-CGGGCC----------C-CSCEEEEEECS--SGGGSCG----GGHHHHHHHHHHTEEEEEEEE
T ss_pred EEEE--e-cccccc----------c-cCCccEEEEcc--chhhCCH----HHHHHHHHHHHHhcCCCcEEE
Confidence 6552 1 111111 1 22 3444444 4788832 2567788776 5689986533
No 40
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=90.22 E-value=3 Score=37.89 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=55.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+ + . ++|||+.+...++.+.++. .+...+|... +...
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~------~----~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~---d~~~ 109 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G------Y----KAVGVDISEVMIQKGKERG------EGPDLSFIKG---DLSS 109 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T------C----EEEEEESCHHHHHHHHTTT------CBTTEEEEEC---BTTB
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C------C----eEEEEECCHHHHHHHHhhc------ccCCceEEEc---chhc
Confidence 4589999999885 45566654 3 2 7999999887776655442 1234444421 1111
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
+ ...++..=+|-|...|||+ .+ ...+|+.+ +.|+|.-++++
T Consensus 110 ~----------~~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 110 L----------PFENEQFEAIMAINSLEWT-EE-----PLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp C----------SSCTTCEEEEEEESCTTSS-SC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred C----------CCCCCCccEEEEcChHhhc-cC-----HHHHHHHHHHHhCCCeEEEE
Confidence 1 1222333344455567887 33 33555554 67899854444
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=89.62 E-value=0.4 Score=44.31 Aligned_cols=94 Identities=11% Similarity=0.095 Sum_probs=52.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+ + . ++|||+.+.+.++.+.++ ++|. .. ...+
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~-~------~----~v~gvD~s~~~~~~a~~~-----------~~~~--~~-d~~~ 92 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE-G------I----ESIGVDINEDMIKFCEGK-----------FNVV--KS-DAIE 92 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH-T------C----CEEEECSCHHHHHHHHTT-----------SEEE--CS-CHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC-C------C----cEEEEECCHHHHHHHHhh-----------ccee--ec-cHHH
Confidence 4579999988875 44566654 3 2 589999988777665444 3332 11 1111
Q ss_pred CccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 270 TSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
. .....++ ++|+ |...|||+.. ..+..+|+.+ +.|+|.-.+++
T Consensus 93 ~--------~~~~~~~~fD~i~--~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 93 Y--------LKSLPDKYLDGVM--ISHFVEHLDP----ERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp H--------HHTSCTTCBSEEE--EESCGGGSCG----GGHHHHHHHHHHHBCTTCCEEE
T ss_pred H--------hhhcCCCCeeEEE--ECCchhhCCc----HHHHHHHHHHHHHcCCCcEEEE
Confidence 0 0011222 3433 3445788842 2467777776 57899844333
No 42
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=89.51 E-value=4.7 Score=38.59 Aligned_cols=104 Identities=12% Similarity=0.022 Sum_probs=60.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-+|+|+|.|.|. +...|+.+ ..|..++|||+.+...++.+.+++ +..|++ .+|.. . +.
T Consensus 119 ~~~vLDiGcG~G~----~~~~la~~--------~~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~v~~~~--~-d~ 179 (305)
T 3ocj_A 119 GCVVASVPCGWMS----ELLALDYS--------ACPGVQLVGIDYDPEALDGATRLA----AGHALAGQITLHR--Q-DA 179 (305)
T ss_dssp TCEEEETTCTTCH----HHHTSCCT--------TCTTCEEEEEESCHHHHHHHHHHH----TTSTTGGGEEEEE--C-CG
T ss_pred CCEEEEecCCCCH----HHHHHHHh--------cCCCCeEEEEECCHHHHHHHHHHH----HhcCCCCceEEEE--C-ch
Confidence 4579999999883 33444322 235679999999988887776654 345554 56552 1 11
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
..+. .. +..=+|-|...+||+.+ ......+|+.+ +.|+|.-.+++
T Consensus 180 ~~~~----------~~-~~fD~v~~~~~~~~~~~---~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 180 WKLD----------TR-EGYDLLTSNGLNIYEPD---DARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GGCC----------CC-SCEEEEECCSSGGGCCC---HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCC----------cc-CCeEEEEECChhhhcCC---HHHHHHHHHHHHHhcCCCeEEEE
Confidence 1111 11 22223334445788732 12344577776 57899866555
No 43
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=88.89 E-value=4.4 Score=35.42 Aligned_cols=111 Identities=12% Similarity=0.105 Sum_probs=65.6
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL- 255 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv- 255 (459)
++.|++.+...+ .-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+ .++
T Consensus 21 ~~~l~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~----~~~~ 80 (199)
T 2xvm_A 21 HSEVLEAVKVVK-PGKTLDLGCGNGR----NSLYLAAN-G----------YDVDAWDKNAMSIANVERIKSI----ENLD 80 (199)
T ss_dssp CHHHHHHTTTSC-SCEEEEETCTTSH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHHH----HTCT
T ss_pred cHHHHHHhhccC-CCeEEEEcCCCCH----HHHHHHHC-C----------CeEEEEECCHHHHHHHHHHHHh----CCCC
Confidence 346777776555 5599999999885 44455554 3 2899999998888777665543 344
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEe
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAE 327 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E 327 (459)
..+|.. . +.... .. ++ +.++.+ ..+||+..+ ....+|+.+ +.|+|.-. ++++
T Consensus 81 ~~~~~~--~-d~~~~----------~~-~~~~D~v~~~--~~l~~~~~~----~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 81 NLHTRV--V-DLNNL----------TF-DRQYDFILST--VVLMFLEAK----TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp TEEEEE--C-CGGGC----------CC-CCCEEEEEEE--SCGGGSCGG----GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcEEEE--c-chhhC----------CC-CCCceEEEEc--chhhhCCHH----HHHHHHHHHHHhcCCCeEEEEEE
Confidence 345442 1 11111 11 22 333333 447887322 466677776 56899854 4444
No 44
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=88.17 E-value=4.9 Score=37.43 Aligned_cols=131 Identities=11% Similarity=-0.044 Sum_probs=74.7
Q ss_pred HHhhccCCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHH
Q 048299 160 LSLNQITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEIL 239 (459)
Q Consensus 160 ~~f~~~~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l 239 (459)
..+|+..+...-.+......+++.+..-+..-+|+|+|.|.| .+...|+.++ ..++|||+.+...+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~~----------~~~v~gvD~s~~~~ 82 (267)
T 3kkz_A 17 CDFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGHV----------TGQVTGLDFLSGFI 82 (267)
T ss_dssp HHHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTTC----------SSEEEEEESCHHHH
T ss_pred HHHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhcc----------CCEEEEEeCCHHHH
Confidence 334444444443444445556666652222568999999887 4556666653 35899999998888
Q ss_pred HHHHHHHHHHHHHcCCe--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-H
Q 048299 240 QRTGERLLKFAQSLGLR--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-K 316 (459)
Q Consensus 240 ~etg~rL~~fA~~lgvp--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r 316 (459)
+.+.+++ +..|++ .+|.. . +.+.+. ..++..=+|-|...+||+ + ...+|+.+ +
T Consensus 83 ~~a~~~~----~~~~~~~~v~~~~--~-d~~~~~----------~~~~~fD~i~~~~~~~~~--~-----~~~~l~~~~~ 138 (267)
T 3kkz_A 83 DIFNRNA----RQSGLQNRVTGIV--G-SMDDLP----------FRNEELDLIWSEGAIYNI--G-----FERGLNEWRK 138 (267)
T ss_dssp HHHHHHH----HHTTCTTTEEEEE--C-CTTSCC----------CCTTCEEEEEESSCGGGT--C-----HHHHHHHHGG
T ss_pred HHHHHHH----HHcCCCcCcEEEE--c-ChhhCC----------CCCCCEEEEEEcCCceec--C-----HHHHHHHHHH
Confidence 7766654 445664 66652 2 222221 122323334444457887 3 34566666 5
Q ss_pred hcCCCeE-EEEec
Q 048299 317 ALNPRVV-TIAER 328 (459)
Q Consensus 317 ~L~P~iv-~~~E~ 328 (459)
-|+|.-+ ++.+.
T Consensus 139 ~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 139 YLKKGGYLAVSEC 151 (267)
T ss_dssp GEEEEEEEEEEEE
T ss_pred HcCCCCEEEEEEe
Confidence 7899854 44444
No 45
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=87.66 E-value=1.2 Score=43.57 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=84.7
Q ss_pred HHHHHHhhccCCCcchhhHhHHHHHHHHh----hhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeE
Q 048299 156 QSCYLSLNQITPFIRFSHLTANQAILESL----QVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITG 231 (459)
Q Consensus 156 ~~a~~~f~~~~P~~kfa~ftaNqAILEA~----~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~ 231 (459)
..+-..+..+.|-++ ...-+|.+.|.-+ .++...=+|+|+|.|.|. +..+..++.+.. |..|||+
T Consensus 42 r~~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT--~~~~~~la~~~~--------P~arVv~ 110 (277)
T 3giw_A 42 KEAGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPT--SPNLHEIAQSVA--------PESRVVY 110 (277)
T ss_dssp HHHHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCC--SSCHHHHHHHHC--------TTCEEEE
T ss_pred HHHHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCc--ccHHHHHHHHHC--------CCCEEEE
Confidence 345566677788763 3345788877643 333213379999998754 223345555443 3569999
Q ss_pred ecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCcccccccc---ccccCCCCeEEEehhhhhhhhccCCCChhH
Q 048299 232 TGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTSVAFYLPS---ALTILPDETLAVNCMLFLHKLLKDHDTRDL 308 (459)
Q Consensus 232 i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~~~~~l~~---~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~ 308 (459)
|+.++..|.....+|... -.-..+|.. . ...+... .+.. .-.++.++.++|-+..-||++.++ ...
T Consensus 111 VD~sp~mLa~Ar~~l~~~---~~~~~~~v~--a-D~~~~~~--~l~~~~~~~~~D~~~p~av~~~avLH~l~d~---~~p 179 (277)
T 3giw_A 111 VDNDPIVLTLSQGLLAST---PEGRTAYVE--A-DMLDPAS--ILDAPELRDTLDLTRPVALTVIAIVHFVLDE---DDA 179 (277)
T ss_dssp EECCHHHHHTTHHHHCCC---SSSEEEEEE--C-CTTCHHH--HHTCHHHHTTCCTTSCCEEEEESCGGGSCGG---GCH
T ss_pred EeCChHHHHHHHHHhccC---CCCcEEEEE--e-cccChhh--hhcccccccccCcCCcchHHhhhhHhcCCch---hhH
Confidence 999998888777766432 112355542 2 2222110 0000 001233454455555568999542 113
Q ss_pred HHHHHH-HHhcCCC-eEEEEecCCC
Q 048299 309 RLFLHK-IKALNPR-VVTIAEREAS 331 (459)
Q Consensus 309 ~~~L~~-ir~L~P~-iv~~~E~ea~ 331 (459)
..+|+. .+.|+|. .+++.+--.+
T Consensus 180 ~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 180 VGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHHHHHhCCCCcEEEEEeccCC
Confidence 456655 4678998 4566655443
No 46
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=87.03 E-value=3.7 Score=40.06 Aligned_cols=123 Identities=12% Similarity=0.033 Sum_probs=73.5
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCC
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPT 270 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~ 270 (459)
-.|+|+|.|.|. |--.++ . .+|..++++++-+...++.+.+++ ..+|+++.|. +. +-...
T Consensus 134 ~~VLDLGCG~Gp----LAl~~~--~-------~~p~a~y~a~DId~~~le~a~~~l----~~~g~~~~~~-v~-D~~~~- 193 (281)
T 3lcv_B 134 NTLRDLACGLNP----LAAPWM--G-------LPAETVYIASDIDARLVGFVDEAL----TRLNVPHRTN-VA-DLLED- 193 (281)
T ss_dssp SEEEETTCTTGG----GCCTTT--T-------CCTTCEEEEEESBHHHHHHHHHHH----HHTTCCEEEE-EC-CTTTS-
T ss_pred ceeeeeccCccH----HHHHHH--h-------hCCCCEEEEEeCCHHHHHHHHHHH----HhcCCCceEE-Ee-eeccc-
Confidence 378999988773 111111 1 357899999999988887766654 5679998887 22 11111
Q ss_pred ccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEecC--CCCCCcchHHHHHHHHHHH
Q 048299 271 SVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAERE--ASHNHPLFLQRFVEAVDHY 348 (459)
Q Consensus 271 ~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E~e--a~~n~~~F~~RF~eaL~~Y 348 (459)
..-.+.+++.+|-. +|+|-++ .....++.+..|+|..|++.=.- .+--++.+ -..|
T Consensus 194 ---------~p~~~~DvaL~lkt--i~~Le~q----~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm-------~~~Y 251 (281)
T 3lcv_B 194 ---------RLDEPADVTLLLKT--LPCLETQ----QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM-------FQNY 251 (281)
T ss_dssp ---------CCCSCCSEEEETTC--HHHHHHH----STTHHHHHHHHSSCSEEEEEEECC-------CH-------HHHH
T ss_pred ---------CCCCCcchHHHHHH--HHHhhhh----hhHHHHHHHHHhCCCCEEEeccchhhcCCCcch-------hhHH
Confidence 11233566666655 7888332 23355699999999987776333 22233333 3457
Q ss_pred HHHHHhh
Q 048299 349 GAIFDSL 355 (459)
Q Consensus 349 salFDsL 355 (459)
+..|+..
T Consensus 252 ~~~~e~~ 258 (281)
T 3lcv_B 252 SQSFESQ 258 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777664
No 47
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=86.66 E-value=6.3 Score=36.95 Aligned_cols=106 Identities=20% Similarity=0.229 Sum_probs=60.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..+++.+.-.+ .-.|+|+|.|.|.- ...|+. ++ .++|||+.+...++.+.+++ -++.|
T Consensus 47 ~~l~~~l~~~~-~~~vLDiGcG~G~~----~~~l~~-~~----------~~v~gvD~s~~~~~~a~~~~------~~~~~ 104 (279)
T 3ccf_A 47 EDLLQLLNPQP-GEFILDLGCGTGQL----TEKIAQ-SG----------AEVLGTDNAATMIEKARQNY------PHLHF 104 (279)
T ss_dssp CHHHHHHCCCT-TCEEEEETCTTSHH----HHHHHH-TT----------CEEEEEESCHHHHHHHHHHC------TTSCE
T ss_pred HHHHHHhCCCC-CCEEEEecCCCCHH----HHHHHh-CC----------CeEEEEECCHHHHHHHHhhC------CCCEE
Confidence 34566665444 56899999998853 344444 43 38999999988777665543 23433
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
.. . +.+.+. . ++..=+|-|...||++ .+ ...+|+.+ +-|+|.-.+++.
T Consensus 105 --~~--~-d~~~~~----------~-~~~fD~v~~~~~l~~~-~d-----~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 105 --DV--A-DARNFR----------V-DKPLDAVFSNAMLHWV-KE-----PEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp --EE--C-CTTTCC----------C-SSCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred --EE--C-ChhhCC----------c-CCCcCEEEEcchhhhC-cC-----HHHHHHHHHHhcCCCcEEEEE
Confidence 31 1 222221 1 1222233344457887 33 34556555 678998655443
No 48
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=86.58 E-value=3.5 Score=40.08 Aligned_cols=111 Identities=12% Similarity=0.143 Sum_probs=63.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-------eEEEEEe
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-------RFQFHPL 262 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-------pFeF~~v 262 (459)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+...++.+.++..+ .++ .++|...
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----------~~v~GiD~S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~ 110 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----------ALLVATDPDADAIARGNERYNK----LNSGIKTKYYKFDYIQE 110 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----------SEEEEEESCHHHHHHHHHHHHH----HCC----CCCEEEEEEC
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----------CeEEEEECCHHHHHHHHHHHHh----ccccccccccccchhhh
Confidence 45799999999852 222333222 2799999999999988876543 233 2556522
Q ss_pred ecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 263 LLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 263 ~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.. ..+.- ...++. ...++..=+|.|++.||++... . ....+|+.+ +.|+|.-++++
T Consensus 111 d~--~~d~~-~~~l~~--~~~~~~FD~V~~~~~lhy~~~~-~--~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 111 TI--RSDTF-VSSVRE--VFYFGKFNIIDWQFAIHYSFHP-R--HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CT--TSSSH-HHHHHT--TCCSSCEEEEEEESCGGGTCST-T--THHHHHHHHHHHEEEEEEEEE
T ss_pred hc--ccchh-hhhhhc--cccCCCeeEEEECchHHHhCCH-H--HHHHHHHHHHHHcCCCCEEEE
Confidence 11 11110 000000 0122334467788889987543 2 356778777 57999955444
No 49
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=86.50 E-value=6.7 Score=35.95 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=70.3
Q ss_pred cCCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHH
Q 048299 165 ITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGE 244 (459)
Q Consensus 165 ~~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~ 244 (459)
..++..-.+-.....|++.+.-.+ .-+|+|+|.|.|. +...|+.+.+ .++|||+.+...++.+.+
T Consensus 13 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~VLDiGcG~G~----~~~~la~~~~----------~~v~gvD~s~~~l~~a~~ 77 (256)
T 1nkv_A 13 EHRIHNPFTEEKYATLGRVLRMKP-GTRILDLGSGSGE----MLCTWARDHG----------ITGTGIDMSSLFTAQAKR 77 (256)
T ss_dssp SCSSSSSCCHHHHHHHHHHTCCCT-TCEEEEETCTTCH----HHHHHHHHTC----------CEEEEEESCHHHHHHHHH
T ss_pred CccccCCCCHHHHHHHHHhcCCCC-CCEEEEECCCCCH----HHHHHHHhcC----------CeEEEEeCCHHHHHHHHH
Confidence 333333333344456666665444 5689999999986 3445554433 268999999888877665
Q ss_pred HHHHHHHHcCCe--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCC
Q 048299 245 RLLKFAQSLGLR--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPR 321 (459)
Q Consensus 245 rL~~fA~~lgvp--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~ 321 (459)
++ +..|++ .+|.. . +.+... . ++..=+|-|...+||+. + ...+|+.+ +-|+|.
T Consensus 78 ~~----~~~~~~~~v~~~~--~-d~~~~~----------~-~~~fD~V~~~~~~~~~~-~-----~~~~l~~~~r~Lkpg 133 (256)
T 1nkv_A 78 RA----EELGVSERVHFIH--N-DAAGYV----------A-NEKCDVAACVGATWIAG-G-----FAGAEELLAQSLKPG 133 (256)
T ss_dssp HH----HHTTCTTTEEEEE--S-CCTTCC----------C-SSCEEEEEEESCGGGTS-S-----SHHHHHHHTTSEEEE
T ss_pred HH----HhcCCCcceEEEE--C-ChHhCC----------c-CCCCCEEEECCChHhcC-C-----HHHHHHHHHHHcCCC
Confidence 54 345654 66652 1 222221 1 22222333455578773 2 34566665 568998
Q ss_pred eE-EEEec
Q 048299 322 VV-TIAER 328 (459)
Q Consensus 322 iv-~~~E~ 328 (459)
-. ++++.
T Consensus 134 G~l~~~~~ 141 (256)
T 1nkv_A 134 GIMLIGEP 141 (256)
T ss_dssp EEEEEEEE
T ss_pred eEEEEecC
Confidence 54 44454
No 50
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=86.15 E-value=5.5 Score=37.64 Aligned_cols=115 Identities=15% Similarity=0.036 Sum_probs=66.7
Q ss_pred HHHHHHh----hhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc
Q 048299 178 QAILESL----QVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL 253 (459)
Q Consensus 178 qAILEA~----~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l 253 (459)
..|++.+ .-.+ .-+|+|+|.|.|.. ...|+.+.+ . ++|||+.+...++.+.+++.+ .
T Consensus 68 ~~l~~~l~~~~~~~~-~~~vLDiGcG~G~~----~~~l~~~~~------~----~v~gvD~s~~~~~~a~~~~~~----~ 128 (297)
T 2o57_A 68 EWLASELAMTGVLQR-QAKGLDLGAGYGGA----ARFLVRKFG------V----SIDCLNIAPVQNKRNEEYNNQ----A 128 (297)
T ss_dssp HHHHHHHHHTTCCCT-TCEEEEETCTTSHH----HHHHHHHHC------C----EEEEEESCHHHHHHHHHHHHH----H
T ss_pred HHHHHHhhhccCCCC-CCEEEEeCCCCCHH----HHHHHHHhC------C----EEEEEeCCHHHHHHHHHHHHh----c
Confidence 4566666 3233 66899999988853 344554433 2 899999998888777666543 3
Q ss_pred CCe--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 254 GLR--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 254 gvp--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
|++ ++|.. . +.+.+. ..++..=+|-|...|||+ .+ ...+|+.+ +-|+|.- +++++..
T Consensus 129 ~~~~~~~~~~--~-d~~~~~----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 129 GLADNITVKY--G-SFLEIP----------CEDNSYDFIWSQDAFLHS-PD-----KLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp TCTTTEEEEE--C-CTTSCS----------SCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCcceEEEE--c-CcccCC----------CCCCCEeEEEecchhhhc-CC-----HHHHHHHHHHHcCCCeEEEEEEec
Confidence 443 55542 2 222221 222333344455567888 32 45566665 5789984 4555554
Q ss_pred C
Q 048299 330 A 330 (459)
Q Consensus 330 a 330 (459)
.
T Consensus 190 ~ 190 (297)
T 2o57_A 190 K 190 (297)
T ss_dssp E
T ss_pred c
Confidence 3
No 51
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=86.00 E-value=3.9 Score=37.18 Aligned_cols=150 Identities=12% Similarity=0.052 Sum_probs=74.2
Q ss_pred HHHHHHHHhhccCCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEec
Q 048299 154 ALQSCYLSLNQITPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTG 233 (459)
Q Consensus 154 ~~~~a~~~f~~~~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~ 233 (459)
.++.++..|....++..-..-..-+.|...+...+ .-+|+|+|.+.|.- ...||..- +|.-+||+|+
T Consensus 24 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~vLdiG~G~G~~----~~~la~~~--------~~~~~v~~vD 90 (221)
T 3u81_A 24 SVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYS-PSLVLELGAYCGYS----AVRMARLL--------QPGARLLTME 90 (221)
T ss_dssp HHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHC-CSEEEEECCTTSHH----HHHHHTTS--------CTTCEEEEEE
T ss_pred HHHHHHHHHhhhcCcCcccCHHHHHHHHHHHHhcC-CCEEEEECCCCCHH----HHHHHHhC--------CCCCEEEEEe
Confidence 34455555554444431111122222333333233 45899999988853 23344321 2346999999
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHH
Q 048299 234 NDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLF 311 (459)
Q Consensus 234 ~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~ 311 (459)
.+...++.+.+++.+ .|+. ++|. ..+..+.+.. +.......+=+.|+++.. .++.. +...+
T Consensus 91 ~~~~~~~~a~~~~~~----~~~~~~v~~~--~~d~~~~l~~---~~~~~~~~~fD~V~~d~~--~~~~~------~~~~~ 153 (221)
T 3u81_A 91 INPDCAAITQQMLNF----AGLQDKVTIL--NGASQDLIPQ---LKKKYDVDTLDMVFLDHW--KDRYL------PDTLL 153 (221)
T ss_dssp SCHHHHHHHHHHHHH----HTCGGGEEEE--ESCHHHHGGG---TTTTSCCCCCSEEEECSC--GGGHH------HHHHH
T ss_pred CChHHHHHHHHHHHH----cCCCCceEEE--ECCHHHHHHH---HHHhcCCCceEEEEEcCC--cccch------HHHHH
Confidence 998888777665543 4553 5554 2211111110 000000011246666543 23331 23345
Q ss_pred HHHHHhcCCCeEEEEecCCCCC
Q 048299 312 LHKIKALNPRVVTIAEREASHN 333 (459)
Q Consensus 312 L~~ir~L~P~iv~~~E~ea~~n 333 (459)
+..++-|+|.-+++++.-...+
T Consensus 154 ~~~~~~LkpgG~lv~~~~~~~~ 175 (221)
T 3u81_A 154 LEKCGLLRKGTVLLADNVIVPG 175 (221)
T ss_dssp HHHTTCCCTTCEEEESCCCCCC
T ss_pred HHhccccCCCeEEEEeCCCCcc
Confidence 6555889999888876544333
No 52
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=85.93 E-value=4.3 Score=37.35 Aligned_cols=111 Identities=15% Similarity=0.079 Sum_probs=64.3
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
-..|++.+...+ .-.|+|+|.|.|. +...|+.+. + . ++|||+.+...++.+.+++. +-.
T Consensus 33 ~~~l~~~~~~~~-~~~vLD~GcG~G~----~~~~l~~~~--------~-~-~v~~vD~s~~~~~~a~~~~~------~~~ 91 (253)
T 3g5l_A 33 WHELKKMLPDFN-QKTVLDLGCGFGW----HCIYAAEHG--------A-K-KVLGIDLSERMLTEAKRKTT------SPV 91 (253)
T ss_dssp HHHHHTTCCCCT-TCEEEEETCTTCH----HHHHHHHTT--------C-S-EEEEEESCHHHHHHHHHHCC------CTT
T ss_pred HHHHHHhhhccC-CCEEEEECCCCCH----HHHHHHHcC--------C-C-EEEEEECCHHHHHHHHHhhc------cCC
Confidence 344555555444 6789999999984 555565542 2 2 89999999887776655543 234
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
.+|... +.+.+ ...++..=+|-|...|||+ .+ ...+|+.+ +-|+|.-.+++.
T Consensus 92 ~~~~~~---d~~~~----------~~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 92 VCYEQK---AIEDI----------AIEPDAYNVVLSSLALHYI-AS-----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEC---CGGGC----------CCCTTCEEEEEEESCGGGC-SC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEc---chhhC----------CCCCCCeEEEEEchhhhhh-hh-----HHHHHHHHHHHcCCCcEEEEE
Confidence 444421 11111 1222323234444457888 33 55677766 468998665553
No 53
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=85.75 E-value=6.5 Score=35.05 Aligned_cols=109 Identities=16% Similarity=0.099 Sum_probs=63.2
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEE
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQF 259 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF 259 (459)
|.+.+...+ .-+|+|+|.|.|. +...|+.+ + -++|||+.+...++.+.+++.. .+ ..+|
T Consensus 43 l~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~----~~-~~~~ 101 (216)
T 3ofk_A 43 LRLSLSSGA-VSNGLEIGCAAGA----FTEKLAPH-C----------KRLTVIDVMPRAIGRACQRTKR----WS-HISW 101 (216)
T ss_dssp HHHHTTTSS-EEEEEEECCTTSH----HHHHHGGG-E----------EEEEEEESCHHHHHHHHHHTTT----CS-SEEE
T ss_pred HHHHcccCC-CCcEEEEcCCCCH----HHHHHHHc-C----------CEEEEEECCHHHHHHHHHhccc----CC-CeEE
Confidence 333444454 7899999999983 55556543 2 3899999998888777666543 22 4454
Q ss_pred EEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 260 HPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 260 ~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.. . +.+... .++..=+|-|...|||+.+ ...+..+|+.+ +.|+|.-++++
T Consensus 102 ~~--~-d~~~~~-----------~~~~fD~v~~~~~l~~~~~---~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 102 AA--T-DILQFS-----------TAELFDLIVVAEVLYYLED---MTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp EE--C-CTTTCC-----------CSCCEEEEEEESCGGGSSS---HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EE--c-chhhCC-----------CCCCccEEEEccHHHhCCC---HHHHHHHHHHHHHHcCCCCEEEE
Confidence 42 1 222211 1122223334455788842 23455666665 57899865554
No 54
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=85.74 E-value=2.6 Score=41.53 Aligned_cols=98 Identities=19% Similarity=0.215 Sum_probs=55.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+- |.+++|+++. +..++.+ +... ..+|.. .+-.+.
T Consensus 189 ~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~a--------~~~~-~v~~~~--~d~~~~ 243 (352)
T 1fp2_A 189 LESIVDVGGGTGT----TAKIICETF---------PKLKCIVFDR-PQVVENL--------SGSN-NLTYVG--GDMFTS 243 (352)
T ss_dssp CSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-HHHHTTC--------CCBT-TEEEEE--CCTTTC
T ss_pred CceEEEeCCCccH----HHHHHHHHC---------CCCeEEEeeC-HHHHhhc--------ccCC-CcEEEe--ccccCC
Confidence 5689999999984 556666543 3568999998 5555432 2221 144442 211111
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCC---C-eEEEEecCC
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNP---R-VVTIAEREA 330 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P---~-iv~~~E~ea 330 (459)
+ + .-++++. ...||++.+ .....+|+.++ .|+| . .++++|...
T Consensus 244 ~------p------~~D~v~~--~~~lh~~~d----~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 244 I------P------NADAVLL--KYILHNWTD----KDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp C------C------CCSEEEE--ESCGGGSCH----HHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred C------C------CccEEEe--ehhhccCCH----HHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 1 1 1244444 344788832 23447777764 6899 4 566776543
No 55
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=84.84 E-value=6.4 Score=37.41 Aligned_cols=110 Identities=11% Similarity=0.077 Sum_probs=63.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.| .+...|+.+- ++..++|||+.+...++.+.+++.+. ....-..+|... +.+.
T Consensus 37 ~~~vLDiGcG~G----~~~~~la~~~--------~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~---d~~~ 100 (299)
T 3g5t_A 37 RKLLVDVGCGPG----TATLQMAQEL--------KPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKIS---SSDD 100 (299)
T ss_dssp CSEEEEETCTTT----HHHHHHHHHS--------SCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEEC---CTTC
T ss_pred CCEEEEECCCCC----HHHHHHHHhC--------CCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEc---CHHh
Confidence 678999999988 3455565432 13568999999988888777665543 111334555522 2333
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
+.. +....+.++..=+|-|...+||+ + ...+|+.+ +.|+|.-++++
T Consensus 101 ~~~----~~~~~~~~~~fD~V~~~~~l~~~--~-----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 101 FKF----LGADSVDKQKIDMITAVECAHWF--D-----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CGG----GCTTTTTSSCEEEEEEESCGGGS--C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred CCc----cccccccCCCeeEEeHhhHHHHh--C-----HHHHHHHHHHhcCCCcEEEE
Confidence 321 11011222434455555668988 4 44556655 57899855443
No 56
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=84.53 E-value=1.5 Score=40.82 Aligned_cols=99 Identities=16% Similarity=0.098 Sum_probs=61.4
Q ss_pred EEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCc
Q 048299 192 HILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTS 271 (459)
Q Consensus 192 HIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~ 271 (459)
+|+|+|.|.| +|--.++. -.|..++++++-+...++-+.++ |+..|+...+.. .+ ...
T Consensus 52 ~VLDlGCG~G----plAl~l~~---------~~p~a~~~A~Di~~~~leiar~~----~~~~g~~~~v~~--~d---~~~ 109 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWN---------ENEKIIYHAYDIDRAEIAFLSSI----IGKLKTTIKYRF--LN---KES 109 (200)
T ss_dssp EEEEETCTTH----HHHHHHHC---------SSCCCEEEEECSCHHHHHHHHHH----HHHSCCSSEEEE--EC---CHH
T ss_pred eEEEecCCCC----HHHHHHHh---------cCCCCEEEEEeCCHHHHHHHHHH----HHhcCCCccEEE--ec---ccc
Confidence 7899987765 44444443 24566999999999888877766 466788755542 11 111
Q ss_pred cccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEec
Q 048299 272 VAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAER 328 (459)
Q Consensus 272 ~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E~ 328 (459)
. .-++ +++..+-. ||+| ++ ......+.++.|+|..+++.=+
T Consensus 110 -------~--~~~~~~DvVLa~k~--LHlL-~~----~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 110 -------D--VYKGTYDVVFLLKM--LPVL-KQ----QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -------H--HTTSEEEEEEEETC--HHHH-HH----TTCCHHHHHHTCEEEEEEEEEE
T ss_pred -------c--CCCCCcChhhHhhH--HHhh-hh----hHHHHHHHHHHhCCCCEEEEeC
Confidence 1 1122 33334333 6888 54 2334567889999998777644
No 57
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=84.53 E-value=5.2 Score=40.25 Aligned_cols=124 Identities=10% Similarity=0.030 Sum_probs=69.8
Q ss_pred hHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC
Q 048299 175 TANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG 254 (459)
Q Consensus 175 taNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg 254 (459)
.....+++.+.... .-+|+|+|.|.|. +...++.+. |..+||+|+.+...++.+.+++...--.-.
T Consensus 209 ~~~~~ll~~l~~~~-~~~VLDlGcG~G~----~s~~la~~~---------p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~ 274 (375)
T 4dcm_A 209 IGARFFMQHLPENL-EGEIVDLGCGNGV----IGLTLLDKN---------PQAKVVFVDESPMAVASSRLNVETNMPEAL 274 (375)
T ss_dssp HHHHHHHHTCCCSC-CSEEEEETCTTCH----HHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHHHHhCcccC-CCeEEEEeCcchH----HHHHHHHHC---------CCCEEEEEECcHHHHHHHHHHHHHcCCCcC
Confidence 34556788887665 5789999999984 444555542 346899999998888887776654321111
Q ss_pred CeEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCeEEEEe
Q 048299 255 LRFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRVVTIAE 327 (459)
Q Consensus 255 vpFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~iv~~~E 327 (459)
+.++|. ..+-.+.+. -..=+.|+.|-.| |+.... .......+++.++ .|+|.-.+++.
T Consensus 275 ~~v~~~--~~D~~~~~~----------~~~fD~Ii~nppf--h~~~~~-~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 275 DRCEFM--INNALSGVE----------PFRFNAVLCNPPF--HQQHAL-TDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGEEEE--ECSTTTTCC----------TTCEEEEEECCCC----------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEE--echhhccCC----------CCCeeEEEECCCc--ccCccc-CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 236665 222222111 0011567777765 432111 1123446677664 58999655553
No 58
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=84.14 E-value=5.7 Score=35.19 Aligned_cols=112 Identities=19% Similarity=0.198 Sum_probs=64.5
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-C
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-L 255 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-v 255 (459)
...|++.+..-...-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+ .+ -
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----------~~v~~~D~s~~~~~~a~~--------~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-A----------DRVTALDGSAEMIAEAGR--------HGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-S----------SEEEEEESCHHHHHHHGG--------GCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-C----------CeEEEEeCCHHHHHHHHh--------cCCC
Confidence 45677777643324599999999985 44555554 4 289999998776665443 44 2
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
..+|.. . +.... ..++..=+|-|...|||+.+ ..+..+|+.+ +.|+|.- +++++..
T Consensus 91 ~~~~~~--~-d~~~~-----------~~~~~~D~v~~~~~l~~~~~----~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 91 NVEFRQ--Q-DLFDW-----------TPDRQWDAVFFAHWLAHVPD----DRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp TEEEEE--C-CTTSC-----------CCSSCEEEEEEESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeEEEe--c-ccccC-----------CCCCceeEEEEechhhcCCH----HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 345442 1 11111 11222223444456888832 2356777776 5789974 4555544
No 59
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=84.12 E-value=9.6 Score=36.45 Aligned_cols=124 Identities=12% Similarity=0.121 Sum_probs=66.4
Q ss_pred HHHHHhhhC--CceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHH----
Q 048299 179 AILESLQVG--QQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQS---- 252 (459)
Q Consensus 179 AILEA~~g~--~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~---- 252 (459)
.+++.+... + .-+|+|+|.|.|.- ...|+.++ .-++|||+.+...++.+.+++......
T Consensus 23 ~~~~~l~~~~~~-~~~VLDlGcG~G~~----~~~l~~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~ 87 (313)
T 3bgv_A 23 EFLEKVRQKKKR-DITVLDLGCGKGGD----LLKWKKGR----------INKLVCTDIADVSVKQCQQRYEDMKNRRDSE 87 (313)
T ss_dssp HHHHHHHHTC---CCEEEEETCTTTTT----HHHHHHTT----------CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-
T ss_pred HHHHHhhhccCC-CCEEEEECCCCcHH----HHHHHhcC----------CCEEEEEeCCHHHHHHHHHHHHHhhhccccc
Confidence 344444433 3 56899999998873 33444433 238999999998888887776543210
Q ss_pred cCCeEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 253 LGLRFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 253 lgvpFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
....++|. .. +.+.... ...+.-.++..=+|-|.+.||++..+ ......+|+.+ +.|+|.-++++
T Consensus 88 ~~~~~~~~--~~-D~~~~~~----~~~~~~~~~~fD~V~~~~~l~~~~~~--~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 88 YIFSAEFI--TA-DSSKELL----IDKFRDPQMCFDICSCQFVCHYSFES--YEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp CCCEEEEE--EC-CTTTSCS----TTTCSSTTCCEEEEEEETCGGGGGGS--HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccceEEEE--Ee-cccccch----hhhcccCCCCEEEEEEecchhhccCC--HHHHHHHHHHHHHHhCCCcEEEE
Confidence 11234444 22 2222210 00121112222234445568887332 12456777777 56899855444
No 60
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=84.09 E-value=2.3 Score=38.34 Aligned_cols=67 Identities=13% Similarity=0.128 Sum_probs=43.4
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEE
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQ 258 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFe 258 (459)
.++.+.-.+ .-+|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.++..+-++..++ ..+
T Consensus 19 ~~~~l~~~~-~~~vLDiGcG~G~----~~~~la~~~---------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~ 84 (218)
T 3mq2_A 19 EFEQLRSQY-DDVVLDVGTGDGK----HPYKVARQN---------PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLL 84 (218)
T ss_dssp HHHHHHTTS-SEEEEEESCTTCH----HHHHHHHHC---------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEE
T ss_pred HHHHhhccC-CCEEEEecCCCCH----HHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceE
Confidence 344444455 6789999999884 444455432 3579999999988777665554444445555 455
Q ss_pred EE
Q 048299 259 FH 260 (459)
Q Consensus 259 F~ 260 (459)
|.
T Consensus 85 ~~ 86 (218)
T 3mq2_A 85 YL 86 (218)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 61
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=83.86 E-value=4.6 Score=40.04 Aligned_cols=109 Identities=16% Similarity=0.166 Sum_probs=59.6
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
..|++.+.+-+..-+|+|+|.|.|. +...|+.+- |.+++|+++. ...++.+ +... ..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---------~~~~~~~~D~-~~~~~~a--------~~~~-~v 254 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---------PLIKGINFDL-PQVIENA--------PPLS-GI 254 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---------TTCEEEEEEC-HHHHTTC--------CCCT-TE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---------CCCeEEEeCh-HHHHHhh--------hhcC-CC
Confidence 4677776422226789999999884 455565533 3679999987 5444332 2211 24
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
+|. ..+-.+.+ +. .++++ +...|||+.+ .....+|+.+ +.|+|.- ++++|..
T Consensus 255 ~~~--~~d~~~~~------~~------~D~v~--~~~~lh~~~d----~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 255 EHV--GGDMFASV------PQ------GDAMI--LKAVCHNWSD----EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp EEE--ECCTTTCC------CC------EEEEE--EESSGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEE--eCCcccCC------CC------CCEEE--EecccccCCH----HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 444 22111111 11 23444 4445788832 2345777776 4689984 5555543
No 62
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=83.71 E-value=17 Score=32.24 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=57.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++.. .+...+|. .. +...
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~-~-------~---~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~--~~-d~~~ 96 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY-G-------F---EVVGVDISEDMIRKAREYAKS----RESNVEFI--VG-DARK 96 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT-T-------C---EEEEEESCHHHHHHHHHHHHH----TTCCCEEE--EC-CTTS
T ss_pred CCeEEEEeccCCH----HHHHHHHc-C-------C---EEEEEECCHHHHHHHHHHHHh----cCCCceEE--EC-chhc
Confidence 4579999999883 44455543 3 3 999999998888777666543 23344444 22 1222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEE-EEec
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVT-IAER 328 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~-~~E~ 328 (459)
.. +.-..=+.|+.|..+.+++. . ....+|+.+ +.|+|.-.+ +.+.
T Consensus 97 ~~--------~~~~~~D~v~~~~~~~~~~~-~-----~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 97 LS--------FEDKTFDYVIFIDSIVHFEP-L-----ELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CC--------SCTTCEEEEEEESCGGGCCH-H-----HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC--------CCCCcEEEEEEcCchHhCCH-H-----HHHHHHHHHHHHcCCCcEEEEEec
Confidence 11 11011145666655445544 1 345566665 578998544 4443
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=83.65 E-value=2.7 Score=40.06 Aligned_cols=117 Identities=12% Similarity=0.085 Sum_probs=65.6
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
.-..+++.+.... . .|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.+..-.+..
T Consensus 71 ~~~~~~~~~~~~~-~-~vLDlGcG~G~----~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~ 133 (299)
T 3g2m_A 71 EAREFATRTGPVS-G-PVLELAAGMGR----LTFPFLDL-G----------WEVTALELSTSVLAAFRKRLAEAPADVRD 133 (299)
T ss_dssp HHHHHHHHHCCCC-S-CEEEETCTTTT----THHHHHTT-T----------CCEEEEESCHHHHHHHHHHHHTSCHHHHT
T ss_pred HHHHHHHhhCCCC-C-cEEEEeccCCH----HHHHHHHc-C----------CeEEEEECCHHHHHHHHHHHhhccccccc
Confidence 3445566665444 4 89999999997 34445543 3 36999999988888877765543211113
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCe-EEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDET-LAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~Ea-LaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
..+|.. . +...+. . ++.. +||.+...+|++ + ...+..+|+.+ +.|+|.-.++++
T Consensus 134 ~v~~~~--~-d~~~~~----------~-~~~fD~v~~~~~~~~~~-~---~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 134 RCTLVQ--G-DMSAFA----------L-DKRFGTVVISSGSINEL-D---EADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp TEEEEE--C-BTTBCC----------C-SCCEEEEEECHHHHTTS-C---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEe--C-chhcCC----------c-CCCcCEEEECCcccccC-C---HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 355542 1 122211 1 2222 233333335655 2 12467778776 568998655554
No 64
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=82.99 E-value=4 Score=35.96 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=62.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|.- ...++.++ .-++|||+.+...++.+.+++.. .|+ ..+|. .. +..
T Consensus 45 ~~~vLDlgcG~G~~----~~~~~~~~----------~~~v~~vD~~~~~~~~a~~~~~~----~~~~~v~~~--~~-d~~ 103 (189)
T 3p9n_A 45 GLAVLDLYAGSGAL----GLEALSRG----------AASVLFVESDQRSAAVIARNIEA----LGLSGATLR--RG-AVA 103 (189)
T ss_dssp TCEEEEETCTTCHH----HHHHHHTT----------CSEEEEEECCHHHHHHHHHHHHH----HTCSCEEEE--ES-CHH
T ss_pred CCEEEEeCCCcCHH----HHHHHHCC----------CCeEEEEECCHHHHHHHHHHHHH----cCCCceEEE--Ec-cHH
Confidence 44699999998842 22233332 23899999998888877766543 354 34444 21 111
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHh---cCCCeEEEEecCCCCC
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKA---LNPRVVTIAEREASHN 333 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~---L~P~iv~~~E~ea~~n 333 (459)
... ..+.-..=+.++.|.++ |+.. ...+.++..+.+ |+|.-+++++.+....
T Consensus 104 ~~~------~~~~~~~fD~i~~~~p~--~~~~-----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 104 AVV------AAGTTSPVDLVLADPPY--NVDS-----ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHH------HHCCSSCCSEEEECCCT--TSCH-----HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred HHH------hhccCCCccEEEECCCC--Ccch-----hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 110 00111112577777663 3321 246677777765 9999888887665433
No 65
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=82.89 E-value=9.6 Score=34.83 Aligned_cols=103 Identities=19% Similarity=0.238 Sum_probs=58.3
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..++..+|.. . +...
T Consensus 42 ~~~vLDlGcG~G~----~~~~l~~~-~----------~~v~gvD~s~~~l~~a~~~~~----~~~~~v~~~~--~-d~~~ 99 (252)
T 1wzn_A 42 VRRVLDLACGTGI----PTLELAER-G----------YEVVGLDLHEEMLRVARRKAK----ERNLKIEFLQ--G-DVLE 99 (252)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHH----HTTCCCEEEE--S-CGGG
T ss_pred CCEEEEeCCCCCH----HHHHHHHC-C----------CeEEEEECCHHHHHHHHHHHH----hcCCceEEEE--C-Chhh
Confidence 5689999999984 44455543 3 289999999888887776654 3455555542 1 1111
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
.. +. ..=++++.++. .++++ . ......+|+.+ +.|+|.-+++++-
T Consensus 100 ~~--------~~-~~fD~v~~~~~-~~~~~-~---~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 100 IA--------FK-NEFDAVTMFFS-TIMYF-D---EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CC--------CC-SCEEEEEECSS-GGGGS-C---HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cc--------cC-CCccEEEEcCC-chhcC-C---HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 11 11 01123322211 23333 2 12466777776 5689997777654
No 66
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=82.56 E-value=13 Score=33.48 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=64.1
Q ss_pred HHHHHHhhhC--CceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 178 QAILESLQVG--QQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 178 qAILEA~~g~--~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
..|.+.+... + .-+|+|+|.|.|.- ...|+.+ + .++|||+.+...++.+.+++.. .++
T Consensus 25 ~~~~~~l~~~~~~-~~~vLdiG~G~G~~----~~~l~~~-~----------~~~~~~D~s~~~~~~a~~~~~~----~~~ 84 (246)
T 1y8c_A 25 DFIIEKCVENNLV-FDDYLDLACGTGNL----TENLCPK-F----------KNTWAVDLSQEMLSEAENKFRS----QGL 84 (246)
T ss_dssp HHHHHHHHTTTCC-TTEEEEETCTTSTT----HHHHGGG-S----------SEEEEECSCHHHHHHHHHHHHH----TTC
T ss_pred HHHHHHHHHhCCC-CCeEEEeCCCCCHH----HHHHHHC-C----------CcEEEEECCHHHHHHHHHHHhh----cCC
Confidence 3444554433 3 56899999999863 3445443 3 2799999998888877766543 344
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhh-hhhhhccCCCChhHHHHHHHHH-hcCCCeEEEEe
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCML-FLHKLLKDHDTRDLRLFLHKIK-ALNPRVVTIAE 327 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~-~Lh~l~~~~~~~~~~~~L~~ir-~L~P~iv~~~E 327 (459)
..+|.. . +.... ... +..=+|-|.. .|||+.. ......+|+.++ .|+|.-+++++
T Consensus 85 ~~~~~~--~-d~~~~----------~~~-~~fD~v~~~~~~l~~~~~---~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 85 KPRLAC--Q-DISNL----------NIN-RKFDLITCCLDSTNYIID---SDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CCEEEC--C-CGGGC----------CCS-CCEEEEEECTTGGGGCCS---HHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CeEEEe--c-ccccC----------Ccc-CCceEEEEcCccccccCC---HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 444441 1 11111 111 2121223333 5788842 124667777765 68998666654
No 67
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=81.97 E-value=6.8 Score=37.27 Aligned_cols=113 Identities=10% Similarity=0.108 Sum_probs=65.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-- 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-- 256 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+.+. | .++|||+.+...++.+.+++. ..|++
T Consensus 63 ~~~~~~~~~~-~~~vLDiGcG~G~----~~~~la~~~-------~---~~v~gvD~s~~~~~~a~~~~~----~~~~~~~ 123 (302)
T 3hem_A 63 LALDKLNLEP-GMTLLDIGCGWGS----TMRHAVAEY-------D---VNVIGLTLSENQYAHDKAMFD----EVDSPRR 123 (302)
T ss_dssp HHHHTTCCCT-TCEEEEETCTTSH----HHHHHHHHH-------C---CEEEEEECCHHHHHHHHHHHH----HSCCSSC
T ss_pred HHHHHcCCCC-cCEEEEeeccCcH----HHHHHHHhC-------C---CEEEEEECCHHHHHHHHHHHH----hcCCCCc
Confidence 4555554444 6689999988764 555566543 2 479999999888877766643 45654
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCC---CChhHHHHHHHH-HhcCCCeEEEE
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDH---DTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~---~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.+|. .. +..+ +. ..=++|+.+ ..+||+.+.. +......+|+.+ +-|+|.-.+++
T Consensus 124 v~~~--~~-d~~~----------~~-~~fD~v~~~--~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 124 KEVR--IQ-GWEE----------FD-EPVDRIVSL--GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEEE--EC-CGGG----------CC-CCCSEEEEE--SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred eEEE--EC-CHHH----------cC-CCccEEEEc--chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 4544 21 1111 10 011344444 4478884310 113466777776 56899854443
No 68
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=81.84 E-value=8.5 Score=33.14 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=35.0
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
..+++.+-. + .-+|+|+|.|.|. +...|+.+ + . ++|+|+.+...++.+.+++
T Consensus 37 ~~~l~~~~~-~-~~~vLdiG~G~G~----~~~~l~~~-~------~----~v~~~D~~~~~~~~a~~~~ 88 (195)
T 3cgg_A 37 ARLIDAMAP-R-GAKILDAGCGQGR----IGGYLSKQ-G------H----DVLGTDLDPILIDYAKQDF 88 (195)
T ss_dssp HHHHHHHSC-T-TCEEEEETCTTTH----HHHHHHHT-T------C----EEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHhcc-C-CCeEEEECCCCCH----HHHHHHHC-C------C----cEEEEcCCHHHHHHHHHhC
Confidence 455565533 3 4589999998875 44455543 3 2 8999999888777766554
No 69
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=81.65 E-value=2.2 Score=40.28 Aligned_cols=123 Identities=19% Similarity=0.139 Sum_probs=67.3
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-Ce
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-LR 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-vp 256 (459)
..|++.+.... .-+|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++.+.....+ ..
T Consensus 47 ~~l~~~l~~~~-~~~vLDiGcG~G~----~~~~l~~~-~-------~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~ 110 (293)
T 3thr_A 47 AWLLGLLRQHG-CHRVLDVACGTGV----DSIMLVEE-G-------F---SVTSVDASDKMLKYALKERWNRRKEPAFDK 110 (293)
T ss_dssp HHHHHHHHHTT-CCEEEETTCTTSH----HHHHHHHT-T-------C---EEEEEESCHHHHHHHHHHHHHTTTSHHHHT
T ss_pred HHHHHHhcccC-CCEEEEecCCCCH----HHHHHHHC-C-------C---eEEEEECCHHHHHHHHHhhhhcccccccce
Confidence 45556665555 6789999999985 34445543 3 2 899999999888887776543221111 12
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehh-hhhhhhccCC-CChhHHHHHHHH-HhcCCCeEEEE
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCM-LFLHKLLKDH-DTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~-~~Lh~l~~~~-~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
++|.. . +...+. ..+ ..++..=+|-|. ..|||+.+.. +......+|+.+ +.|+|.-++++
T Consensus 111 ~~~~~--~-d~~~~~------~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 111 WVIEE--A-NWLTLD------KDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp CEEEE--C-CGGGHH------HHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred eeEee--c-ChhhCc------ccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 33331 1 111110 011 222333334444 5678885410 123467777776 56899855444
No 70
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=81.32 E-value=18 Score=31.77 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=56.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|.-...++ + +++ .++|||+.+...++.+.+++.+ .+..++|. .. +.+.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~-~~~----------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~--~~-d~~~ 82 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---V-EDG----------YKTYGIEISDLQLKKAENFSRE----NNFKLNIS--KG-DIRK 82 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---H-HTT----------CEEEEEECCHHHHHHHHHHHHH----HTCCCCEE--EC-CTTS
T ss_pred CCEEEEECCCCCHHHHHHH---H-hCC----------CEEEEEECCHHHHHHHHHHHHh----cCCceEEE--EC-chhh
Confidence 4579999988876443333 2 232 3899999998888877666544 23334443 21 2222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.. ..++..=+|-|...+||+.. .....+|+.+ +.|+|.-++++
T Consensus 83 ~~----------~~~~~fD~v~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 83 LP----------FKDESMSFVYSYGTIFHMRK----NDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp CC----------SCTTCEEEEEECSCGGGSCH----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC----------CCCCceeEEEEcChHHhCCH----HHHHHHHHHHHHHcCCCcEEEE
Confidence 11 11222222333345788732 2456666665 57899854444
No 71
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=81.22 E-value=4.8 Score=38.74 Aligned_cols=101 Identities=12% Similarity=0.027 Sum_probs=63.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
--.|+|+|.|.|. |--.+. |..+++|++-+...++...+ ++...|+++.|.. .+-...
T Consensus 106 p~~VLDlGCG~gp----Lal~~~------------~~~~y~a~DId~~~i~~ar~----~~~~~g~~~~~~v--~D~~~~ 163 (253)
T 3frh_A 106 PRRVLDIACGLNP----LALYER------------GIASVWGCDIHQGLGDVITP----FAREKDWDFTFAL--QDVLCA 163 (253)
T ss_dssp CSEEEEETCTTTH----HHHHHT------------TCSEEEEEESBHHHHHHHHH----HHHHTTCEEEEEE--CCTTTS
T ss_pred CCeEEEecCCccH----HHHHhc------------cCCeEEEEeCCHHHHHHHHH----HHHhcCCCceEEE--eecccC
Confidence 3489999998872 222121 26799999988877766544 4666799999882 221111
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEec
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAER 328 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E~ 328 (459)
.+. .+.+++.++-. +|+|=+. .....++.+..|+|..|++.=+
T Consensus 164 ---------~~~-~~~DvvLllk~--lh~LE~q----~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 164 ---------PPA-EAGDLALIFKL--LPLLERE----QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ---------CCC-CBCSEEEEESC--HHHHHHH----STTHHHHHHHHCBCSEEEEEEE
T ss_pred ---------CCC-CCcchHHHHHH--HHHhhhh----chhhHHHHHHHhcCCCEEEEcC
Confidence 111 24566666665 6877332 2335568888999997777644
No 72
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=81.00 E-value=2.3 Score=40.84 Aligned_cols=54 Identities=11% Similarity=0.035 Sum_probs=37.8
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
..|++.+.-.+ .-+|+|+|.|.|. +-..|+.+ + . +||||+.+...++.+.+++.
T Consensus 35 ~~il~~l~l~~-g~~VLDlGcGtG~----~a~~La~~-g------~----~V~gvD~S~~ml~~Ar~~~~ 88 (261)
T 3iv6_A 35 ENDIFLENIVP-GSTVAVIGASTRF----LIEKALER-G------A----SVTVFDFSQRMCDDLAEALA 88 (261)
T ss_dssp HHHHHTTTCCT-TCEEEEECTTCHH----HHHHHHHT-T------C----EEEEEESCHHHHHHHHHHTS
T ss_pred HHHHHhcCCCC-cCEEEEEeCcchH----HHHHHHhc-C------C----EEEEEECCHHHHHHHHHHHH
Confidence 34566555444 6689999999885 44556654 3 2 79999999888887766653
No 73
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=80.42 E-value=3.6 Score=39.40 Aligned_cols=48 Identities=15% Similarity=0.296 Sum_probs=33.4
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFA 250 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA 250 (459)
.-.|+|+|.+.| .+...|+.+-+ ..+||||+.+...++.+.+++..+.
T Consensus 47 ~~~VLDiGCG~G----~~~~~la~~~~---------~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 47 GRDVLDLGCNVG----HLTLSIACKWG---------PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TSEEEEESCTTC----HHHHHHHHHTC---------CSEEEEEESCHHHHHHHHHTC----
T ss_pred CCcEEEeCCCCC----HHHHHHHHHcC---------CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 457999999998 45556666543 2399999999888888877766543
No 74
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=80.21 E-value=13 Score=33.93 Aligned_cols=100 Identities=14% Similarity=0.205 Sum_probs=56.4
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-+|+|+|.|.|.- ...|+.+ + .++|||+.+...++.+.+++ +...-.++|.. . +.+.
T Consensus 40 ~~~vLDiG~G~G~~----~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~--~-d~~~ 97 (263)
T 2yqz_A 40 EPVFLELGVGTGRI----ALPLIAR-G----------YRYIALDADAAMLEVFRQKI----AGVDRKVQVVQ--A-DARA 97 (263)
T ss_dssp CCEEEEETCTTSTT----HHHHHTT-T----------CEEEEEESCHHHHHHHHHHT----TTSCTTEEEEE--S-CTTS
T ss_pred CCEEEEeCCcCCHH----HHHHHHC-C----------CEEEEEECCHHHHHHHHHHh----hccCCceEEEE--c-cccc
Confidence 56899999999863 2344443 3 27999999988887776655 22223455542 1 2222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
+. ..++..=+|-|...+|++ .+ ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP----------LPDESVHGVIVVHLWHLV-PD-----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC----------SCTTCEEEEEEESCGGGC-TT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC----------CCCCCeeEEEECCchhhc-CC-----HHHHHHHHHHHCCCCcEEEEE
Confidence 21 122322233344457887 33 44566655 678998554443
No 75
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=79.00 E-value=11 Score=39.13 Aligned_cols=121 Identities=6% Similarity=-0.026 Sum_probs=68.7
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH---HHHHc
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK---FAQSL 253 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~---fA~~l 253 (459)
-..|++.+.-.. .=+|+|+|.|.|. +.-.+|.+.+ .-+++||+.+.+.++.+.+++.+ .++..
T Consensus 162 i~~il~~l~l~~-gd~VLDLGCGtG~----l~l~lA~~~g---------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~ 227 (438)
T 3uwp_A 162 VAQMIDEIKMTD-DDLFVDLGSGVGQ----VVLQVAAATN---------CKHHYGVEKADIPAKYAETMDREFRKWMKWY 227 (438)
T ss_dssp HHHHHHHHCCCT-TCEEEEESCTTSH----HHHHHHHHCC---------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC-CCEEEEeCCCCCH----HHHHHHHHCC---------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh
Confidence 455666664444 5579999998884 3344554443 23899999987777666655544 35666
Q ss_pred CC---eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEE-EEec
Q 048299 254 GL---RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVT-IAER 328 (459)
Q Consensus 254 gv---pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~-~~E~ 328 (459)
|+ .++|. .. +..+++. .. .+..=.+|++|..+ + .. +....+....+.|+|.-.+ +.|.
T Consensus 228 Gl~~~rVefi--~G-D~~~lp~----~d--~~~~aDVVf~Nn~~--F--~p----dl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 228 GKKHAEYTLE--RG-DFLSEEW----RE--RIANTSVIFVNNFA--F--GP----EVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TBCCCEEEEE--EC-CTTSHHH----HH--HHHTCSEEEECCTT--C--CH----HHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CCCCCCeEEE--EC-cccCCcc----cc--ccCCccEEEEcccc--c--Cc----hHHHHHHHHHHcCCCCcEEEEeec
Confidence 76 34544 22 2222221 00 11223577788763 2 12 2455555667899999544 4453
No 76
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=78.91 E-value=4.9 Score=38.18 Aligned_cols=100 Identities=15% Similarity=0.160 Sum_probs=54.8
Q ss_pred EEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCc
Q 048299 192 HILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTS 271 (459)
Q Consensus 192 HIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~ 271 (459)
.|+|+|.|.|. +...|+.+ + -++|||+.+...++.+ +.. -.++|.. . +.+++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----------~~v~gvD~s~~ml~~a--------~~~-~~v~~~~--~-~~e~~~ 94 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----------ERVHAVDPGEAQIRQA--------LRH-PRVTYAV--A-PAEDTG 94 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----------SEEEEEESCHHHHHTC--------CCC-TTEEEEE--C-CTTCCC
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----------CEEEEEeCcHHhhhhh--------hhc-CCceeeh--h-hhhhhc
Confidence 58999999984 33445543 2 2799999988766543 221 1234442 1 233332
Q ss_pred cccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecCCCCCCc
Q 048299 272 VAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAEREASHNHP 335 (459)
Q Consensus 272 ~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~ea~~n~~ 335 (459)
+.++..=+|-|...+|++ + .+.+|+.+ |-|+|.-+ ++.........|
T Consensus 95 ----------~~~~sfD~v~~~~~~h~~-~------~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 95 ----------LPPASVDVAIAAQAMHWF-D------LDRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp ----------CCSSCEEEEEECSCCTTC-C------HHHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred ----------ccCCcccEEEEeeehhHh-h------HHHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 223433344455567876 2 33566655 56899954 455554444444
No 77
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=78.06 E-value=8.6 Score=37.75 Aligned_cols=107 Identities=15% Similarity=0.144 Sum_probs=58.9
Q ss_pred HHHHHhh--hCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 179 AILESLQ--VGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 179 AILEA~~--g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
.|++.+. -.. .-+|+|+|.|.|. +...|+.+- |.+++|+++. ...++. |+.+. .
T Consensus 182 ~~~~~~~~~~~~-~~~vlDvG~G~G~----~~~~l~~~~---------p~~~~~~~D~-~~~~~~--------a~~~~-~ 237 (358)
T 1zg3_A 182 LVLQENKRVFEG-LESLVDVGGGTGG----VTKLIHEIF---------PHLKCTVFDQ-PQVVGN--------LTGNE-N 237 (358)
T ss_dssp HHHHHTHHHHHT-CSEEEEETCTTSH----HHHHHHHHC---------TTSEEEEEEC-HHHHSS--------CCCCS-S
T ss_pred HHHHhcchhccC-CCEEEEECCCcCH----HHHHHHHHC---------CCCeEEEecc-HHHHhh--------cccCC-C
Confidence 5666661 122 4689999999884 555565543 4678999987 344432 22211 1
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCC---C-eEEEEecC
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNP---R-VVTIAERE 329 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P---~-iv~~~E~e 329 (459)
.+|.. .+-.+ . +. .-++++.+.. ||++.+ .....+|+.+ +.|+| . .++++|.-
T Consensus 238 v~~~~--~d~~~--~--------~~--~~D~v~~~~v--lh~~~d----~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 238 LNFVG--GDMFK--S--------IP--SADAVLLKWV--LHDWND----EQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEEEE--CCTTT--C--------CC--CCSEEEEESC--GGGSCH----HHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred cEEEe--CccCC--C--------CC--CceEEEEccc--ccCCCH----HHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 44442 21111 1 11 2355555544 788732 2345777776 46899 4 56666654
No 78
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=77.92 E-value=21 Score=30.47 Aligned_cols=114 Identities=13% Similarity=0.028 Sum_probs=65.8
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
..+.+++.+.-.+ .-+|+|+|.|.|. +...++.+ + .++|+|+.+...++.+.+++. ..++
T Consensus 40 ~~~~l~~~~~~~~-~~~vLdiG~G~G~----~~~~~~~~-~----------~~v~~~D~~~~~~~~a~~~~~----~~~~ 99 (194)
T 1dus_A 40 GTKILVENVVVDK-DDDILDLGCGYGV----IGIALADE-V----------KSTTMADINRRAIKLAKENIK----LNNL 99 (194)
T ss_dssp HHHHHHHHCCCCT-TCEEEEETCTTSH----HHHHHGGG-S----------SEEEEEESCHHHHHHHHHHHH----HTTC
T ss_pred HHHHHHHHcccCC-CCeEEEeCCCCCH----HHHHHHHc-C----------CeEEEEECCHHHHHHHHHHHH----HcCC
Confidence 3456677765554 6689999999883 44556554 4 289999999888877665553 3455
Q ss_pred e---EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 256 R---FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 256 p---FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
+ .+|. ..+-.+.. .-..=+.|+.|.. +|+- ......+|+.+ +.|+|.-.+++..
T Consensus 100 ~~~~~~~~--~~d~~~~~----------~~~~~D~v~~~~~--~~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 100 DNYDIRVV--HSDLYENV----------KDRKYNKIITNPP--IRAG-----KEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp TTSCEEEE--ECSTTTTC----------TTSCEEEEEECCC--STTC-----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccceEEE--ECchhccc----------ccCCceEEEECCC--cccc-----hhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 4 5654 22211111 1011145555554 3431 12355666665 5689986555543
No 79
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=77.03 E-value=8.7 Score=34.56 Aligned_cols=109 Identities=15% Similarity=0.114 Sum_probs=60.6
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeE
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRF 257 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpF 257 (459)
+.+++.+......-+|+|+|.|.|. +...|+.+ ++ ++|||+.+...++.+.+++.. ..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--------~~---~v~gvD~s~~~~~~a~~~~~~-------~v 88 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--------FN---DITCVEASEEAISHAQGRLKD-------GI 88 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--------CS---CEEEEESCHHHHHHHHHHSCS-------CE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--------CC---cEEEEeCCHHHHHHHHHhhhC-------Ce
Confidence 4456666532114469999999884 45555542 23 699999998877766555432 34
Q ss_pred EEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH--hcCCCeE-EEEec
Q 048299 258 QFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK--ALNPRVV-TIAER 328 (459)
Q Consensus 258 eF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir--~L~P~iv-~~~E~ 328 (459)
+|.. . +.++. ..++..=+|-|...|||+ .+ ...+|+.++ -|+|.-. ++.+.
T Consensus 89 ~~~~--~-d~~~~-----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 89 TYIH--S-RFEDA-----------QLPRRYDNIVLTHVLEHI-DD-----PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EEEE--S-CGGGC-----------CCSSCEEEEEEESCGGGC-SS-----HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEE--c-cHHHc-----------CcCCcccEEEEhhHHHhh-cC-----HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 4442 1 11111 112222233444558888 33 356777765 6899744 44443
No 80
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=75.96 E-value=10 Score=35.46 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=58.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++. ..|++ .+|. .. +.
T Consensus 69 ~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~--~~-d~ 126 (285)
T 4htf_A 69 KLRVLDAGGGEGQ----TAIKMAER-G----------HQVILCDLSAQMIDRAKQAAE----AKGVSDNMQFI--HC-AA 126 (285)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHHHH----C-CCGGGEEEE--ES-CG
T ss_pred CCEEEEeCCcchH----HHHHHHHC-C----------CEEEEEECCHHHHHHHHHHHH----hcCCCcceEEE--Ec-CH
Confidence 5689999999983 55666654 3 279999999888877766654 34553 4444 22 12
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
+... ...++..=+|-|...|||+ .+ ...+|+.+ +-|+|.-++++.
T Consensus 127 ~~~~---------~~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 127 QDVA---------SHLETPVDLILFHAVLEWV-AD-----PRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp GGTG---------GGCSSCEEEEEEESCGGGC-SC-----HHHHHHHHHHTEEEEEEEEEE
T ss_pred HHhh---------hhcCCCceEEEECchhhcc-cC-----HHHHHHHHHHHcCCCeEEEEE
Confidence 2211 0122322233444557887 33 34566665 578998655443
No 81
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=75.27 E-value=13 Score=34.39 Aligned_cols=98 Identities=19% Similarity=0.238 Sum_probs=58.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++. ++ +|. .. +...
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~-~-------~---~v~gvD~s~~~~~~a~~~~~------~~--~~~--~~-d~~~ 104 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS-F-------G---TVEGLELSADMLAIARRRNP------DA--VLH--HG-DMRD 104 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT-S-------S---EEEEEESCHHHHHHHHHHCT------TS--EEE--EC-CTTT
T ss_pred CCcEEEeCCcCCH----HHHHHHHc-C-------C---eEEEEECCHHHHHHHHhhCC------CC--EEE--EC-ChHH
Confidence 4579999999884 55556553 3 2 79999999887777665532 33 333 11 2222
Q ss_pred CccccccccccccCCCCeEEEehhh-hhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 270 TSVAFYLPSALTILPDETLAVNCML-FLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~-~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
+. . ++..=+|-|.+ .|||+.. ......+|+.+ +.|+|.-+++++
T Consensus 105 ~~----------~-~~~fD~v~~~~~~l~~~~~---~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 105 FS----------L-GRRFSAVTCMFSSIGHLAG---QAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CC----------C-SCCEEEEEECTTGGGGSCH---HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CC----------c-cCCcCEEEEcCchhhhcCC---HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 1 23222333444 5788842 12466777776 468999777775
No 82
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=74.89 E-value=14 Score=31.38 Aligned_cols=51 Identities=18% Similarity=0.251 Sum_probs=35.0
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.+++.+.-.+ .-.|+|+|.|.|. +...|+.+ + . ++|||+.+...++.+.++
T Consensus 8 ~~~~~~~~~~-~~~vLDiG~G~G~----~~~~l~~~--------~--~-~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 8 EYLPNIFEGK-KGVIVDYGCGNGF----YCKYLLEF--------A--T-KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp TTHHHHHSSC-CEEEEEETCTTCT----THHHHHTT--------E--E-EEEEECSCHHHHHHHHHH
T ss_pred HHHHhcCcCC-CCeEEEECCCCCH----HHHHHHhh--------c--C-eEEEEeCCHHHHHHHHHh
Confidence 3455555555 7789999999886 33444432 2 3 999999998877776655
No 83
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=74.41 E-value=6.1 Score=35.52 Aligned_cols=41 Identities=12% Similarity=-0.026 Sum_probs=30.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+...++.+.++
T Consensus 23 ~~~vLD~GCG~G~----~~~~la~~-g----------~~V~gvD~S~~~l~~a~~~ 63 (203)
T 1pjz_A 23 GARVLVPLCGKSQ----DMSWLSGQ-G----------YHVVGAELSEAAVERYFTE 63 (203)
T ss_dssp TCEEEETTTCCSH----HHHHHHHH-C----------CEEEEEEECHHHHHHHHHH
T ss_pred CCEEEEeCCCCcH----hHHHHHHC-C----------CeEEEEeCCHHHHHHHHHH
Confidence 4579999998884 34446654 4 2899999998888776554
No 84
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=73.61 E-value=5.2 Score=32.61 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=34.2
Q ss_pred CCCeEEEeEecCC----HHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 223 PPPMLRITGTGND----IEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 223 gpp~LRIT~i~~~----~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
|||.-|||...++ ...|+++-+.+.+..+..|..|+|+
T Consensus 50 gaP~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 8999999999987 4578999999999999999999986
No 85
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=73.27 E-value=9.9 Score=33.67 Aligned_cols=55 Identities=25% Similarity=0.333 Sum_probs=40.8
Q ss_pred hHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 175 TANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 175 taNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
...+.|++.+.... .-+|+|+|.|.| .+...|+.+ + . ++|||+.+...++.+.++
T Consensus 39 ~~~~~~~~~~~~~~-~~~vLdiG~G~G----~~~~~l~~~-~------~----~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 39 VTDQAILLAILGRQ-PERVLDLGCGEG----WLLRALADR-G------I----EAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp THHHHHHHHHHHTC-CSEEEEETCTTC----HHHHHHHTT-T------C----EEEEEESCHHHHHHHHHT
T ss_pred cccHHHHHHhhcCC-CCEEEEeCCCCC----HHHHHHHHC-C------C----EEEEEcCCHHHHHHHHHh
Confidence 45667888888776 789999999998 355666654 4 2 899999988777665544
No 86
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=73.27 E-value=60 Score=30.28 Aligned_cols=104 Identities=20% Similarity=0.256 Sum_probs=60.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+.+- |+..++|||+.+...++.+.+++ +..+...+|. .. +.+.
T Consensus 23 ~~~vLDiGcG~G~----~~~~l~~~~--------~~~~~v~gvD~s~~~~~~a~~~~----~~~~~~v~~~--~~-d~~~ 83 (284)
T 3gu3_A 23 PVHIVDYGCGYGY----LGLVLMPLL--------PEGSKYTGIDSGETLLAEARELF----RLLPYDSEFL--EG-DATE 83 (284)
T ss_dssp CCEEEEETCTTTH----HHHHHTTTS--------CTTCEEEEEESCHHHHHHHHHHH----HSSSSEEEEE--ES-CTTT
T ss_pred CCeEEEecCCCCH----HHHHHHHhC--------CCCCEEEEEECCHHHHHHHHHHH----HhcCCceEEE--Ec-chhh
Confidence 6789999999983 445555542 33479999999988777665554 3345556655 22 2222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
.. + ++..=+|-|...+||+ .+ .+.+|+.+ +-|+|.- ++++|.+
T Consensus 84 ~~--------~---~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 84 IE--------L---NDKYDIAICHAFLLHM-TT-----PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CC--------C---SSCEEEEEEESCGGGC-SS-----HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cC--------c---CCCeeEEEECChhhcC-CC-----HHHHHHHHHHHcCCCCEEEEEecc
Confidence 21 1 1222233344447887 33 34566655 6789985 4555655
No 87
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=73.23 E-value=12 Score=33.63 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=37.0
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
-..|.+.+...+ .-+|+|+|.|.|. +...|+.+ + . -++|||+.+...++.+.+++
T Consensus 32 ~~~l~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~-~------~---~~v~~vD~s~~~~~~a~~~~ 86 (243)
T 3bkw_A 32 WPALRAMLPEVG-GLRIVDLGCGFGW----FCRWAHEH-G------A---SYVLGLDLSEKMLARARAAG 86 (243)
T ss_dssp HHHHHHHSCCCT-TCEEEEETCTTCH----HHHHHHHT-T------C---SEEEEEESCHHHHHHHHHTS
T ss_pred HHHHHHhccccC-CCEEEEEcCcCCH----HHHHHHHC-C------C---CeEEEEcCCHHHHHHHHHhc
Confidence 345666665444 6689999999885 44455554 3 1 18999999887776655543
No 88
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=72.70 E-value=15 Score=33.15 Aligned_cols=102 Identities=12% Similarity=-0.020 Sum_probs=57.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+. + ..++|||+.+...++.+.+++.+.- ..-..+|. .. +...
T Consensus 67 ~~~vLDiGcG~G~----~~~~l~~-~----------~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~--~~-d~~~ 126 (235)
T 3lcc_A 67 LGRALVPGCGGGH----DVVAMAS-P----------ERFVVGLDISESALAKANETYGSSP--KAEYFSFV--KE-DVFT 126 (235)
T ss_dssp CEEEEEETCTTCH----HHHHHCB-T----------TEEEEEECSCHHHHHHHHHHHTTSG--GGGGEEEE--CC-CTTT
T ss_pred CCCEEEeCCCCCH----HHHHHHh-C----------CCeEEEEECCHHHHHHHHHHhhccC--CCcceEEE--EC-chhc
Confidence 3499999999884 3344543 2 3579999999888887766654311 11234554 21 2222
Q ss_pred CccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHH-hcCCCeEEEE
Q 048299 270 TSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIK-ALNPRVVTIA 326 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir-~L~P~iv~~~ 326 (459)
..+ ...+ ++|+ |...||++..+ ....+|+.++ .|+|.-.+++
T Consensus 127 ~~~----~~~f-----D~v~--~~~~l~~~~~~----~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 127 WRP----TELF-----DLIF--DYVFFCAIEPE----MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CCC----SSCE-----EEEE--EESSTTTSCGG----GHHHHHHHHHHHEEEEEEEEE
T ss_pred CCC----CCCe-----eEEE--EChhhhcCCHH----HHHHHHHHHHHHCCCCcEEEE
Confidence 110 0011 2333 34457887432 4667777775 5899865544
No 89
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=71.97 E-value=2.3 Score=42.74 Aligned_cols=109 Identities=15% Similarity=0.197 Sum_probs=61.2
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEE
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQ 258 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFe 258 (459)
.|++.+.-.+ .-.|+|+|.|.|. ++..|+.+ + . ++|||+.+...++. |+..|++..
T Consensus 98 ~l~~~~~~~~-~~~VLDiGcG~G~----~~~~l~~~-g-------~---~v~gvD~s~~~~~~--------a~~~~~~~~ 153 (416)
T 4e2x_A 98 DFLATELTGP-DPFIVEIGCNDGI----MLRTIQEA-G-------V---RHLGFEPSSGVAAK--------AREKGIRVR 153 (416)
T ss_dssp HHHHTTTCSS-SCEEEEETCTTTT----THHHHHHT-T-------C---EEEEECCCHHHHHH--------HHTTTCCEE
T ss_pred HHHHHhCCCC-CCEEEEecCCCCH----HHHHHHHc-C-------C---cEEEECCCHHHHHH--------HHHcCCCcc
Confidence 3444444344 6689999999997 55566543 3 2 89999998776654 444466543
Q ss_pred EEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 259 FHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 259 F~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
-. ...... ...+...++..=+|-|...|||+ .+ ...+|+.+ +-|+|.-+++.+
T Consensus 154 ~~-----~~~~~~-----~~~l~~~~~~fD~I~~~~vl~h~-~d-----~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 154 TD-----FFEKAT-----ADDVRRTEGPANVIYAANTLCHI-PY-----VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp CS-----CCSHHH-----HHHHHHHHCCEEEEEEESCGGGC-TT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred ee-----eechhh-----HhhcccCCCCEEEEEECChHHhc-CC-----HHHHHHHHHHHcCCCeEEEEE
Confidence 21 111000 00111112323334444558898 33 55677776 568998665554
No 90
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=71.48 E-value=30 Score=30.80 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=60.3
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~~v~~~~~e 268 (459)
.-.|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++.. .|+ ..+|. .. +..
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---------p~~~v~gvD~s~~~l~~a~~~~~~----~~~~~v~~~--~~-d~~ 101 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---------PDINYIGIDIQKSVLSYALDKVLE----VGVPNIKLL--WV-DGS 101 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHH----HCCSSEEEE--EC-CSS
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---------CCCCEEEEEcCHHHHHHHHHHHHH----cCCCCEEEE--eC-CHH
Confidence 4469999999884 444555543 356899999998888877666543 454 34444 22 222
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhccCCC--ChhHHHHHHHHH-hcCCCeEEEEecC
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHD--TRDLRLFLHKIK-ALNPRVVTIAERE 329 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~--~~~~~~~L~~ir-~L~P~iv~~~E~e 329 (459)
.+. ..+.-..=+.|++|... +..-..+. .-....+|+.+. .|+|.-+++++.+
T Consensus 102 ~~~------~~~~~~~~D~i~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 102 DLT------DYFEDGEIDRLYLNFSD--PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp CGG------GTSCTTCCSEEEEESCC--CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred HHH------hhcCCCCCCEEEEECCC--CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 221 11111111566777542 11000000 001256777765 5999977766543
No 91
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=71.27 E-value=12 Score=34.83 Aligned_cols=113 Identities=13% Similarity=0.137 Sum_probs=61.2
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
...|++.+.-.+ .-+|+|+|.|.|. +...|+. + ..++|||+.+...++.+.++. .
T Consensus 23 ~~~l~~~~~~~~-~~~vLDiGcG~G~----~~~~l~~-~----------~~~v~gvD~s~~~~~~a~~~~---------~ 77 (261)
T 3ege_A 23 VNAIINLLNLPK-GSVIADIGAGTGG----YSVALAN-Q----------GLFVYAVEPSIVMRQQAVVHP---------Q 77 (261)
T ss_dssp HHHHHHHHCCCT-TCEEEEETCTTSH----HHHHHHT-T----------TCEEEEECSCHHHHHSSCCCT---------T
T ss_pred HHHHHHHhCCCC-CCEEEEEcCcccH----HHHHHHh-C----------CCEEEEEeCCHHHHHHHHhcc---------C
Confidence 345666665444 6689999999986 3344443 3 248999998876655432222 4
Q ss_pred EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCC-eEEEEecCCCCCC
Q 048299 257 FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPR-VVTIAEREASHNH 334 (459)
Q Consensus 257 FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~-iv~~~E~ea~~n~ 334 (459)
.+|. . .+.+.+. ..++..=+|-|...+||+ .+ ...+|+.+ +.|+ . .+++++...+...
T Consensus 78 ~~~~--~-~d~~~~~----------~~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 78 VEWF--T-GYAENLA----------LPDKSVDGVISILAIHHF-SH-----LEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp EEEE--C-CCTTSCC----------SCTTCBSEEEEESCGGGC-SS-----HHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred CEEE--E-CchhhCC----------CCCCCEeEEEEcchHhhc-cC-----HHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 4444 1 1222221 112212233344447888 33 44555555 5678 6 4666666544433
No 92
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=71.20 E-value=8.9 Score=35.01 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=58.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+.+. ..++|+|+.+...++.+.+++...- +...+|.. . +...
T Consensus 80 ~~~vLDiGcG~G~----~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~--~-d~~~ 139 (241)
T 2ex4_A 80 TSCALDCGAGIGR----ITKRLLLPL----------FREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFC--C-GLQD 139 (241)
T ss_dssp CSEEEEETCTTTH----HHHHTTTTT----------CSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEE--C-CGGG
T ss_pred CCEEEEECCCCCH----HHHHHHHhc----------CCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEE--c-Chhh
Confidence 5689999998885 344444432 2389999999888877766654321 22344442 1 1211
Q ss_pred CccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeE-EEEecC
Q 048299 270 TSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVV-TIAERE 329 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv-~~~E~e 329 (459)
. ...++ ++|+.+ ..|||+.+ ..+..+|+.+ +.|+|.-+ ++.+..
T Consensus 140 ~----------~~~~~~fD~v~~~--~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 140 F----------TPEPDSYDVIWIQ--WVIGHLTD----QHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp C----------CCCSSCEEEEEEE--SCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred c----------CCCCCCEEEEEEc--chhhhCCH----HHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 1 11122 334433 45788832 2355677766 56899854 444543
No 93
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=70.87 E-value=18 Score=33.70 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=57.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~~v~~~~~ 267 (459)
.-+|+|+|.|.|.-- ..|+.++ ..++|||+.+...++.+.+++. ..++ ..+|. .. +.
T Consensus 65 ~~~vLDiGcG~G~~~----~~l~~~~----------~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~--~~-d~ 123 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDL----LKYERAG----------IGEYYGVDIAEVSINDARVRAR----NMKRRFKVFFR--AQ-DS 123 (298)
T ss_dssp TCEEEEETCTTTTTH----HHHHHHT----------CSEEEEEESCHHHHHHHHHHHH----TSCCSSEEEEE--ES-CT
T ss_pred CCeEEEECCCCCHHH----HHHHHCC----------CCEEEEEECCHHHHHHHHHHHH----hcCCCccEEEE--EC-Cc
Confidence 458999999998532 2244432 2389999999888877766543 3454 34443 22 22
Q ss_pred CCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 268 DPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.... +. .++ ++|+.+ ..||++... ......+|+.+ +-|+|.-.+++
T Consensus 124 ~~~~--------~~-~~~~fD~v~~~--~~l~~~~~~--~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 124 YGRH--------MD-LGKEFDVISSQ--FSFHYAFST--SESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp TTSC--------CC-CSSCEEEEEEE--SCGGGGGSS--HHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccc--------cC-CCCCcCEEEEC--chhhhhcCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 2211 10 122 344433 446775321 22456677766 56899855444
No 94
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=70.64 E-value=29 Score=30.51 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=39.4
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
..+++.+.-.+ .-.|+|+|.|.|. +...|+.+. |..++|+|+.+.+.++.+.+++.+
T Consensus 30 ~~~l~~l~~~~-~~~vLDiG~G~G~----~~~~la~~~---------~~~~v~~vD~s~~~~~~a~~~~~~ 86 (204)
T 3e05_A 30 AVTLSKLRLQD-DLVMWDIGAGSAS----VSIEASNLM---------PNGRIFALERNPQYLGFIRDNLKK 86 (204)
T ss_dssp HHHHHHTTCCT-TCEEEEETCTTCH----HHHHHHHHC---------TTSEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-CCEEEEECCCCCH----HHHHHHHHC---------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 34566665554 6689999999886 334455432 356999999999888887766544
No 95
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=69.03 E-value=8 Score=37.95 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=67.5
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
..+.|++.+.... .-+|+|+|.|.|. +...|+.+. |..++|+|+.+...++.+.+++. ..++
T Consensus 184 ~~~~ll~~l~~~~-~~~VLDlGcG~G~----~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~~~~----~~~~ 245 (343)
T 2pjd_A 184 GSQLLLSTLTPHT-KGKVLDVGCGAGV----LSVAFARHS---------PKIRLTLCDVSAPAVEASRATLA----ANGV 245 (343)
T ss_dssp HHHHHHHHSCTTC-CSBCCBTTCTTSH----HHHHHHHHC---------TTCBCEEEESBHHHHHHHHHHHH----HTTC
T ss_pred HHHHHHHhcCcCC-CCeEEEecCccCH----HHHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHH----HhCC
Confidence 4677888884443 3479999998886 333444432 34689999999888887776654 3466
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
..+|. ..+..+... . .=+.|+.|..| |+.... .......+|+.+ +-|+|.-.+++
T Consensus 246 ~~~~~--~~d~~~~~~------~-----~fD~Iv~~~~~--~~g~~~-~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 246 EGEVF--ASNVFSEVK------G-----RFDMIISNPPF--HDGMQT-SLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp CCEEE--ECSTTTTCC------S-----CEEEEEECCCC--CSSSHH-HHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCEEE--Ecccccccc------C-----CeeEEEECCCc--ccCccC-CHHHHHHHHHHHHHhCCCCcEEEE
Confidence 65553 222111110 0 11466666654 432111 112356777776 56899865444
No 96
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=68.31 E-value=38 Score=31.11 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=29.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.-.|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 55 ~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~gvD~s~~~l~~a~~~ 95 (260)
T 2avn_A 55 PCRVLDLGGGTGK----WSLFLQER-G----------FEVVLVDPSKEMLEVAREK 95 (260)
T ss_dssp CCEEEEETCTTCH----HHHHHHTT-T----------CEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCcCH----HHHHHHHc-C----------CeEEEEeCCHHHHHHHHhh
Confidence 5589999999885 44455543 3 2899999998877766554
No 97
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=66.30 E-value=14 Score=31.44 Aligned_cols=60 Identities=13% Similarity=0.088 Sum_probs=41.1
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
.+++.+.-.+ .-+|+|+|.|.| .+...|+.+. |..++|+|+.+...++.+.+++. ..|++
T Consensus 16 ~~~~~~~~~~-~~~vldiG~G~G----~~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~----~~~~~ 75 (178)
T 3hm2_A 16 LAISALAPKP-HETLWDIGGGSG----SIAIEWLRST---------PQTTAVCFEISEERRERILSNAI----NLGVS 75 (178)
T ss_dssp HHHHHHCCCT-TEEEEEESTTTT----HHHHHHHTTS---------SSEEEEEECSCHHHHHHHHHHHH----TTTCT
T ss_pred HHHHHhcccC-CCeEEEeCCCCC----HHHHHHHHHC---------CCCeEEEEeCCHHHHHHHHHHHH----HhCCC
Confidence 4455555454 678999999887 3455555543 35799999999888877766654 44554
No 98
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=65.72 E-value=18 Score=33.65 Aligned_cols=44 Identities=11% Similarity=-0.042 Sum_probs=30.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-+|+|+|.|.|.. ++ ++...+ --+||||+.+...++.+.+++.
T Consensus 56 g~~vLDiGCG~G~~--~~---~~~~~~---------~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 56 GDTLIDIGSGPTIY--QV---LAACDS---------FQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp EEEEEESSCTTCCG--GG---TTGGGT---------EEEEEEEESCHHHHHHHHHHHH
T ss_pred CceEEEeCCCccHH--HH---HHHHhh---------hcceeeccccHHHHHHHHHHHh
Confidence 67899999999752 11 222232 2379999999988888877653
No 99
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=65.55 E-value=29 Score=32.47 Aligned_cols=40 Identities=8% Similarity=-0.032 Sum_probs=29.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGE 244 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~ 244 (459)
.-.|+|+|.|.|. ++..||.+ | .++|||+.+...++.+.+
T Consensus 69 ~~~vLD~GCG~G~----~~~~La~~-G----------~~V~gvD~S~~~i~~a~~ 108 (252)
T 2gb4_A 69 GLRVFFPLCGKAI----EMKWFADR-G----------HTVVGVEISEIGIREFFA 108 (252)
T ss_dssp SCEEEETTCTTCT----HHHHHHHT-T----------CEEEEECSCHHHHHHHHH
T ss_pred CCeEEEeCCCCcH----HHHHHHHC-C----------CeEEEEECCHHHHHHHHH
Confidence 5689999999884 34556654 4 289999999888876543
No 100
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=65.26 E-value=28 Score=36.70 Aligned_cols=82 Identities=13% Similarity=0.177 Sum_probs=51.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-CeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-LRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-vpFeF~~v~~~~~e 268 (459)
-+.|+|+|.|-|. |-..||.+ | . ++|||+.+...++.+.. .|+.-| +..+|.... .+
T Consensus 67 ~~~vLDvGCG~G~----~~~~la~~-g------a----~V~giD~~~~~i~~a~~----~a~~~~~~~~~~~~~~---~~ 124 (569)
T 4azs_A 67 PLNVLDLGCAQGF----FSLSLASK-G------A----TIVGIDFQQENINVCRA----LAEENPDFAAEFRVGR---IE 124 (569)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT-T------C----EEEEEESCHHHHHHHHH----HHHTSTTSEEEEEECC---HH
T ss_pred CCeEEEECCCCcH----HHHHHHhC-C------C----EEEEECCCHHHHHHHHH----HHHhcCCCceEEEECC---HH
Confidence 5789999999885 77778864 3 1 79999999888776543 355545 677777322 22
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhcc
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLK 301 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~ 301 (459)
++. . ...++..=+|-|+--|||+.+
T Consensus 125 ~~~------~--~~~~~~fD~v~~~e~~ehv~~ 149 (569)
T 4azs_A 125 EVI------A--ALEEGEFDLAIGLSVFHHIVH 149 (569)
T ss_dssp HHH------H--HCCTTSCSEEEEESCHHHHHH
T ss_pred HHh------h--hccCCCccEEEECcchhcCCC
Confidence 211 0 112233335667767999954
No 101
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=64.84 E-value=21 Score=34.64 Aligned_cols=134 Identities=12% Similarity=0.094 Sum_probs=72.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-CCeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-GLRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-gvpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...|+.+. |.-+||+|+.+...++.+.+++...+..+ +-.+++. ..+-.
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~--~~Da~- 159 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKHP---------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH--VGDGF- 159 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCHH-
T ss_pred CCEEEEECCCchH----HHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECcHH-
Confidence 4579999998884 455566543 35799999999999988888877665444 2234444 21111
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHHHH
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVEAV 345 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~eaL 345 (459)
+ .+...++ ++|++++..... .. ..-....+++.+ +.|+|.-+++++.......+ +.+....
T Consensus 160 --~-------~l~~~~~~fD~Ii~d~~~~~~---~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~~~ 223 (304)
T 2o07_A 160 --E-------FMKQNQDAFDVIITDSSDPMG---PA-ESLFKESYYQLMKTALKEDGVLCCQGECQWLHL---DLIKEMR 223 (304)
T ss_dssp --H-------HHHTCSSCEEEEEEECC---------------CHHHHHHHHHEEEEEEEEEEEECTTTCH---HHHHHHH
T ss_pred --H-------HHhhCCCCceEEEECCCCCCC---cc-hhhhHHHHHHHHHhccCCCeEEEEecCCcccch---HHHHHHH
Confidence 1 0110111 567777653211 10 000123566665 57899988887765433333 2233334
Q ss_pred HHHHHHHHhh
Q 048299 346 DHYGAIFDSL 355 (459)
Q Consensus 346 ~~YsalFDsL 355 (459)
.+...+|...
T Consensus 224 ~~l~~~f~~v 233 (304)
T 2o07_A 224 QFCQSLFPVV 233 (304)
T ss_dssp HHHHHHCSEE
T ss_pred HHHHHhCCCc
Confidence 4455556543
No 102
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=64.57 E-value=76 Score=28.09 Aligned_cols=23 Identities=13% Similarity=0.284 Sum_probs=18.2
Q ss_pred cccchhHHHHHHHhCCCccccCC
Q 048299 392 RHERFDSWEMILRSCGYSNVPLS 414 (459)
Q Consensus 392 R~E~~~~W~~r~~~aGF~~~~ls 414 (459)
+.-+.+.|...++.+||+.+.+.
T Consensus 164 ~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 164 RFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHHCCCeEEEEe
Confidence 33467899999999999987654
No 103
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=64.51 E-value=30 Score=32.38 Aligned_cols=44 Identities=20% Similarity=-0.022 Sum_probs=31.4
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-+|+|+|.|.|. +..+ +.+.. + -+||||+.+...++.+.+++.
T Consensus 72 ~~~vLDiGcG~G~-~~~l----~~~~~------~---~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 72 GRTLIDIGSGPTV-YQLL----SACSH------F---EDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CSEEEEETCTTCC-GGGT----TGGGG------C---SEEEEECSCHHHHHHHHHHHT
T ss_pred CCeEEEECCCcCh-HHHH----hhccC------C---CeEEEeCCCHHHHHHHHHHHh
Confidence 5689999999998 5433 22222 1 289999999888887777653
No 104
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=64.38 E-value=21 Score=31.51 Aligned_cols=50 Identities=22% Similarity=0.299 Sum_probs=33.8
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGE 244 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~ 244 (459)
..|++.+. .+ .-+|+|+|.|.| .+...|+.+ + .++|||+.+...++.+.+
T Consensus 23 ~~l~~~~~-~~-~~~vLdiG~G~G----~~~~~l~~~-~----------~~~~~~D~~~~~~~~~~~ 72 (230)
T 3cc8_A 23 PNLLKHIK-KE-WKEVLDIGCSSG----ALGAAIKEN-G----------TRVSGIEAFPEAAEQAKE 72 (230)
T ss_dssp HHHHTTCC-TT-CSEEEEETCTTS----HHHHHHHTT-T----------CEEEEEESSHHHHHHHHT
T ss_pred HHHHHHhc-cC-CCcEEEeCCCCC----HHHHHHHhc-C----------CeEEEEeCCHHHHHHHHH
Confidence 45666665 44 668999999888 345556553 2 489999988776655443
No 105
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=61.66 E-value=26 Score=31.78 Aligned_cols=106 Identities=14% Similarity=0.187 Sum_probs=58.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++ . .-..+|. .. +..+
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~-~-------~---~v~gvD~s~~~~~~a~~~~----~--~~~~~~~--~~-d~~~ 112 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF-F-------P---RVIGLDVSKSALEIAAKEN----T--AANISYR--LL-DGLV 112 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH-S-------S---CEEEEESCHHHHHHHHHHS----C--CTTEEEE--EC-CTTC
T ss_pred CCeEEEEcCCCCH----HHHHHHHh-C-------C---CEEEEECCHHHHHHHHHhC----c--ccCceEE--EC-cccc
Confidence 4569999999873 44555542 2 3 8999999988887776654 1 1134444 22 2222
Q ss_pred Ccccccccccccc-CCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe-EEEEecC
Q 048299 270 TSVAFYLPSALTI-LPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV-VTIAERE 329 (459)
Q Consensus 270 ~~~~~~l~~~l~~-~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i-v~~~E~e 329 (459)
... ...+.. .+-++|+ |...+|++.. .....+|+.+ +.|+|.- ++++|..
T Consensus 113 ~~~----~~~~~~~~~~d~v~--~~~~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 113 PEQ----AAQIHSEIGDANIY--MRTGFHHIPV----EKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHH----HHHHHHHHCSCEEE--EESSSTTSCG----GGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred ccc----ccccccccCccEEE--EcchhhcCCH----HHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 211 000100 0123444 3444687732 2456677766 5689975 5666654
No 106
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=61.31 E-value=22 Score=35.14 Aligned_cols=133 Identities=13% Similarity=0.098 Sum_probs=74.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-CCeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-GLRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-gvpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...|+.++ |.-+||+|+.+...++.+.+++.+++..+ +-.++|. ..+-.+
T Consensus 121 ~~~VLdIG~G~G~----~a~~la~~~---------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~--~~D~~~ 185 (334)
T 1xj5_A 121 PKKVLVIGGGDGG----VLREVARHA---------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV--IGDGVA 185 (334)
T ss_dssp CCEEEEETCSSSH----HHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE--ESCHHH
T ss_pred CCEEEEECCCccH----HHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--ECCHHH
Confidence 4589999999885 555666533 45799999999999998888887665433 2234544 221110
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHHHH
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVEAV 345 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~eaL 345 (459)
.+. ...++ ++|++|+....+.. + . -....+++.+ +.|+|.-++++..+.-...+.. +.+.+
T Consensus 186 ~l~---------~~~~~~fDlIi~d~~~p~~~~--~-~-l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~---~~~~~ 249 (334)
T 1xj5_A 186 FLK---------NAAEGSYDAVIVDSSDPIGPA--K-E-LFEKPFFQSVARALRPGGVVCTQAESLWLHMDI---IEDIV 249 (334)
T ss_dssp HHH---------TSCTTCEEEEEECCCCTTSGG--G-G-GGSHHHHHHHHHHEEEEEEEEEECCCTTTCHHH---HHHHH
T ss_pred HHH---------hccCCCccEEEECCCCccCcc--h-h-hhHHHHHHHHHHhcCCCcEEEEecCCccccHHH---HHHHH
Confidence 000 01112 56676664222211 1 0 0124566665 5789998888875544443322 33333
Q ss_pred HHHHHHHH
Q 048299 346 DHYGAIFD 353 (459)
Q Consensus 346 ~~YsalFD 353 (459)
.-...+|.
T Consensus 250 ~~l~~~F~ 257 (334)
T 1xj5_A 250 SNCREIFK 257 (334)
T ss_dssp HHHHHHCS
T ss_pred HHHHHhCc
Confidence 33445554
No 107
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=61.26 E-value=19 Score=33.16 Aligned_cols=56 Identities=16% Similarity=0.125 Sum_probs=38.1
Q ss_pred HHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 181 LESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 181 LEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
++.+.+.. ...|+|+|.|.| .+.-.|+.+-. .|..+||||+.+...++.+.+++..
T Consensus 44 l~~~~~~~-~~~vLD~gcGsG----~~~~~la~~~~-------~~~~~v~gvDis~~~l~~A~~~~~~ 99 (250)
T 1o9g_A 44 LARLPGDG-PVTLWDPCCGSG----YLLTVLGLLHR-------RSLRQVIASDVDPAPLELAAKNLAL 99 (250)
T ss_dssp HHTSSCCS-CEEEEETTCTTS----HHHHHHHHHTG-------GGEEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHhcccCC-CCeEEECCCCCC----HHHHHHHHHhc-------cCCCeEEEEECCHHHHHHHHHHHHH
Confidence 34443344 789999999999 45555555411 1357999999998888777766543
No 108
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=60.38 E-value=22 Score=32.40 Aligned_cols=106 Identities=15% Similarity=0.142 Sum_probs=57.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEE
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQ 258 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFe 258 (459)
.+++.+...+ .-+|+|+|.|.|.--..|.+.+ + ..++|||+.+...++.+.+++ -++ +
T Consensus 24 ~l~~~~~~~~-~~~vLdiG~G~G~~~~~l~~~~---~----------~~~v~~~D~s~~~~~~a~~~~------~~~--~ 81 (259)
T 2p35_A 24 DLLAQVPLER-VLNGYDLGCGPGNSTELLTDRY---G----------VNVITGIDSDDDMLEKAADRL------PNT--N 81 (259)
T ss_dssp HHHTTCCCSC-CSSEEEETCTTTHHHHHHHHHH---C----------TTSEEEEESCHHHHHHHHHHS------TTS--E
T ss_pred HHHHhcCCCC-CCEEEEecCcCCHHHHHHHHhC---C----------CCEEEEEECCHHHHHHHHHhC------CCc--E
Confidence 3444443333 5579999999886443333322 2 237999999887777665541 133 4
Q ss_pred EEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 259 FHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 259 F~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
|.. . +.+... .++..=+|-|...+|++ .+ ...+|+.+ +.|+|.-.+++
T Consensus 82 ~~~--~-d~~~~~-----------~~~~fD~v~~~~~l~~~-~~-----~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 82 FGK--A-DLATWK-----------PAQKADLLYANAVFQWV-PD-----HLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp EEE--C-CTTTCC-----------CSSCEEEEEEESCGGGS-TT-----HHHHHHHHGGGEEEEEEEEE
T ss_pred EEE--C-ChhhcC-----------ccCCcCEEEEeCchhhC-CC-----HHHHHHHHHHhcCCCeEEEE
Confidence 431 1 122111 11212223334457887 32 45667766 67899854444
No 109
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=60.31 E-value=84 Score=27.17 Aligned_cols=51 Identities=14% Similarity=0.056 Sum_probs=35.3
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
. .|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++.. .++..+|.
T Consensus 31 ~-~vLdiGcG~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~ 81 (202)
T 2kw5_A 31 G-KILCLAEGEGR----NACFLASL-G----------YEVTAVDQSSVGLAKAKQLAQE----KGVKITTV 81 (202)
T ss_dssp S-EEEECCCSCTH----HHHHHHTT-T----------CEEEEECSSHHHHHHHHHHHHH----HTCCEEEE
T ss_pred C-CEEEECCCCCH----hHHHHHhC-C----------CeEEEEECCHHHHHHHHHHHHh----cCCceEEE
Confidence 5 89999988875 34555543 3 2899999998888777666543 35555554
No 110
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=59.00 E-value=29 Score=30.46 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=44.8
Q ss_pred hHhHHHHHHHHhhh--CCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHH
Q 048299 173 HLTANQAILESLQV--GQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFA 250 (459)
Q Consensus 173 ~ftaNqAILEA~~g--~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA 250 (459)
+....+.+++.+.. .+ .-.|+|+|.|.|. +...|+.++ ..++|||+.+...++.+.+++.
T Consensus 43 ~~~~~~~~~~~l~~~~~~-~~~vLDiG~G~G~----~~~~l~~~~----------~~~v~~vD~s~~~~~~a~~~~~--- 104 (205)
T 3grz_A 43 NHQTTQLAMLGIERAMVK-PLTVADVGTGSGI----LAIAAHKLG----------AKSVLATDISDESMTAAEENAA--- 104 (205)
T ss_dssp CHHHHHHHHHHHHHHCSS-CCEEEEETCTTSH----HHHHHHHTT----------CSEEEEEESCHHHHHHHHHHHH---
T ss_pred CCccHHHHHHHHHHhccC-CCEEEEECCCCCH----HHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHH---
Confidence 34455666666652 33 5689999999983 344466532 3489999999888877666543
Q ss_pred HHcCCe-EEEE
Q 048299 251 QSLGLR-FQFH 260 (459)
Q Consensus 251 ~~lgvp-FeF~ 260 (459)
..+++ ++|.
T Consensus 105 -~~~~~~v~~~ 114 (205)
T 3grz_A 105 -LNGIYDIALQ 114 (205)
T ss_dssp -HTTCCCCEEE
T ss_pred -HcCCCceEEE
Confidence 34554 5554
No 111
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=57.82 E-value=31 Score=33.81 Aligned_cols=114 Identities=19% Similarity=0.172 Sum_probs=62.4
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR 256 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp 256 (459)
.++|++.+.-.+ .-+|+|+|.|.|. +...++.+ + .-++|||+.+. .++.+.+ .++..|++
T Consensus 39 ~~~i~~~l~~~~-~~~VLDiGcGtG~----ls~~la~~-g---------~~~V~~vD~s~-~~~~a~~----~~~~~~l~ 98 (348)
T 2y1w_A 39 QRAILQNHTDFK-DKIVLDVGCGSGI----LSFFAAQA-G---------ARKIYAVEAST-MAQHAEV----LVKSNNLT 98 (348)
T ss_dssp HHHHHHTGGGTT-TCEEEEETCTTSH----HHHHHHHT-T---------CSEEEEEECST-HHHHHHH----HHHHTTCT
T ss_pred HHHHHhccccCC-cCEEEEcCCCccH----HHHHHHhC-C---------CCEEEEECCHH-HHHHHHH----HHHHcCCC
Confidence 356777776555 5689999998884 44555554 2 24899999874 4443333 33344542
Q ss_pred --EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEe
Q 048299 257 --FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAE 327 (459)
Q Consensus 257 --FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E 327 (459)
.+|. .. +.+++.. +. .=+.|+.+.+ ++|+..+ ...+.+...-+-|+|.-+++..
T Consensus 99 ~~v~~~--~~-d~~~~~~----~~-----~~D~Ivs~~~--~~~~~~~---~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 99 DRIVVI--PG-KVEEVSL----PE-----QVDIIISEPM--GYMLFNE---RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTEEEE--ES-CTTTCCC----SS-----CEEEEEECCC--BTTBTTT---SHHHHHHHGGGGEEEEEEEESC
T ss_pred CcEEEE--Ec-chhhCCC----CC-----ceeEEEEeCc--hhcCChH---HHHHHHHHHHhhcCCCeEEEEe
Confidence 4443 22 2332221 11 1134444444 4666433 2344555555778999776643
No 112
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=57.55 E-value=41 Score=32.21 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=72.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-CeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-LRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-vpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...++.+. |.-+||+|+.+...++.+.+++.+++..++ -.+++. ..+-
T Consensus 91 ~~~VLdiG~G~G~----~~~~l~~~~---------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~--~~D~-- 153 (296)
T 1inl_A 91 PKKVLIIGGGDGG----TLREVLKHD---------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV--IANG-- 153 (296)
T ss_dssp CCEEEEEECTTCH----HHHHHTTST---------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESCH--
T ss_pred CCEEEEEcCCcCH----HHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcH--
Confidence 4579999999884 555666543 346999999999999888888777655442 234444 2111
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHHHH
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVEAV 345 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~eaL 345 (459)
.+ .+...++ ++|++|.... ..... ..-....+++.+ +.|+|.-+++++...-.. -...+.+.+
T Consensus 154 -~~-------~l~~~~~~fD~Ii~d~~~~--~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~ 219 (296)
T 1inl_A 154 -AE-------YVRKFKNEFDVIIIDSTDP--TAGQG-GHLFTEEFYQACYDALKEDGVFSAETEDPFY---DIGWFKLAY 219 (296)
T ss_dssp -HH-------HGGGCSSCEEEEEEEC-------------CCSHHHHHHHHHHEEEEEEEEEECCCTTT---THHHHHHHH
T ss_pred -HH-------HHhhCCCCceEEEEcCCCc--ccCch-hhhhHHHHHHHHHHhcCCCcEEEEEccCccc---CHHHHHHHH
Confidence 11 0110112 5667665421 01100 000114566665 578999877776432111 134455555
Q ss_pred HHHHHHHHhh
Q 048299 346 DHYGAIFDSL 355 (459)
Q Consensus 346 ~~YsalFDsL 355 (459)
......|...
T Consensus 220 ~~l~~~F~~v 229 (296)
T 1inl_A 220 RRISKVFPIT 229 (296)
T ss_dssp HHHHHHCSEE
T ss_pred HHHHHHCCce
Confidence 5555556543
No 113
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=57.27 E-value=84 Score=31.76 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=62.6
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EE
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQ 258 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-Fe 258 (459)
+++.+.-.. .-.|+|+|.|.|.--. .||.+ + -+++||+.+.+.++.+.+++ +..|++ .+
T Consensus 278 ~~~~l~~~~-~~~VLDlgcG~G~~~~----~la~~-~----------~~V~gvD~s~~al~~A~~n~----~~~~~~~v~ 337 (433)
T 1uwv_A 278 ALEWLDVQP-EDRVLDLFCGMGNFTL----PLATQ-A----------ASVVGVEGVPALVEKGQQNA----RLNGLQNVT 337 (433)
T ss_dssp HHHHHTCCT-TCEEEEESCTTTTTHH----HHHTT-S----------SEEEEEESCHHHHHHHHHHH----HHTTCCSEE
T ss_pred HHHhhcCCC-CCEEEECCCCCCHHHH----HHHhh-C----------CEEEEEeCCHHHHHHHHHHH----HHcCCCceE
Confidence 334443233 4479999999886433 34543 2 27999999998888876665 445663 55
Q ss_pred EEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEe
Q 048299 259 FHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAE 327 (459)
Q Consensus 259 F~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E 327 (459)
|. ..+..+.+. ...+.-..=++|++|-.. ...+.+++.+..++|+-++.+.
T Consensus 338 f~--~~d~~~~l~-----~~~~~~~~fD~Vv~dPPr-----------~g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 338 FY--HENLEEDVT-----KQPWAKNGFDKVLLDPAR-----------AGAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp EE--ECCTTSCCS-----SSGGGTTCCSEEEECCCT-----------TCCHHHHHHHHHHCCSEEEEEE
T ss_pred EE--ECCHHHHhh-----hhhhhcCCCCEEEECCCC-----------ccHHHHHHHHHhcCCCeEEEEE
Confidence 55 222222121 000111112566665331 1134688889999999887763
No 114
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=57.11 E-value=40 Score=33.45 Aligned_cols=102 Identities=13% Similarity=0.099 Sum_probs=59.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-.|+|+|.|.| .+...++.+ + . -++|||+.+ +.++.+.+ .++..|++ .+|.. .+.
T Consensus 64 ~~~VLDlGcGtG----~ls~~la~~-g-------~--~~V~gvD~s-~~~~~a~~----~~~~~~~~~~v~~~~---~d~ 121 (376)
T 3r0q_C 64 GKTVLDVGTGSG----ILAIWSAQA-G-------A--RKVYAVEAT-KMADHARA----LVKANNLDHIVEVIE---GSV 121 (376)
T ss_dssp TCEEEEESCTTT----HHHHHHHHT-T-------C--SEEEEEESS-TTHHHHHH----HHHHTTCTTTEEEEE---SCG
T ss_pred CCEEEEeccCcC----HHHHHHHhc-C-------C--CEEEEEccH-HHHHHHHH----HHHHcCCCCeEEEEE---Cch
Confidence 567999999998 344445554 3 1 289999988 66655533 34455665 55542 122
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
+++. +. ..=++|+.|.+ .|.+..+ ..++.+|+.+ +-|+|.-+++..
T Consensus 122 ~~~~--------~~-~~~D~Iv~~~~--~~~l~~e---~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 122 EDIS--------LP-EKVDVIISEWM--GYFLLRE---SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp GGCC--------CS-SCEEEEEECCC--BTTBTTT---CTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhcC--------cC-CcceEEEEcCh--hhcccch---HHHHHHHHHHHhhCCCCeEEEEe
Confidence 2222 11 11145555543 3444322 2477888888 789999776654
No 115
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=55.41 E-value=55 Score=29.16 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=58.2
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCC
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPT 270 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~ 270 (459)
-.|+|+|.|.|. +...|+.+ .++|||+.+...++.+.+++.+ .+...+|... +....
T Consensus 35 ~~vLdiG~G~G~----~~~~l~~~------------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~~~---d~~~~ 91 (243)
T 3d2l_A 35 KRIADIGCGTGT----ATLLLADH------------YEVTGVDLSEEMLEIAQEKAME----TNRHVDFWVQ---DMREL 91 (243)
T ss_dssp CEEEEESCTTCH----HHHHHTTT------------SEEEEEESCHHHHHHHHHHHHH----TTCCCEEEEC---CGGGC
T ss_pred CeEEEecCCCCH----HHHHHhhC------------CeEEEEECCHHHHHHHHHhhhh----cCCceEEEEc---Chhhc
Confidence 478999999885 44455432 4899999998888877666543 3444454421 11111
Q ss_pred ccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 271 SVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 271 ~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
. +. ..=++++.++ ..+||+.. ......+|+.+ +.|+|.-.++++-
T Consensus 92 ~--------~~-~~fD~v~~~~-~~~~~~~~---~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 92 E--------LP-EPVDAITILC-DSLNYLQT---EADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp C--------CS-SCEEEEEECT-TGGGGCCS---HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C--------CC-CCcCEEEEeC-CchhhcCC---HHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 1 11 1113333332 14777732 13456677766 5689997666643
No 116
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=55.33 E-value=25 Score=36.47 Aligned_cols=114 Identities=19% Similarity=0.152 Sum_probs=63.4
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
.+|++.+...+ .-+|+|+|.|.|. +...++.++ ..+||||+.+. .++.+. +.++..|++
T Consensus 148 ~~il~~l~~~~-~~~VLDiGcGtG~----la~~la~~~----------~~~V~gvD~s~-~l~~A~----~~~~~~gl~~ 207 (480)
T 3b3j_A 148 RAILQNHTDFK-DKIVLDVGCGSGI----LSFFAAQAG----------ARKIYAVEAST-MAQHAE----VLVKSNNLTD 207 (480)
T ss_dssp HHHHHTGGGTT-TCEEEEESCSTTH----HHHHHHHTT----------CSEEEEEECHH-HHHHHH----HHHHHTTCTT
T ss_pred HHHHHhhhhcC-CCEEEEecCcccH----HHHHHHHcC----------CCEEEEEEcHH-HHHHHH----HHHHHcCCCC
Confidence 45666665444 5689999999885 444566533 35999999765 554433 334455653
Q ss_pred -EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHHHhcCCCeEEEEec
Q 048299 257 -FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKALNPRVVTIAER 328 (459)
Q Consensus 257 -FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~L~P~iv~~~E~ 328 (459)
.+|. .. +++++.+ +. .=++|+.|.+ ++++..+ ...+.+....+-|+|.-+++.+.
T Consensus 208 ~v~~~--~~-d~~~~~~----~~-----~fD~Ivs~~~--~~~~~~e---~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 208 RIVVI--PG-KVEEVSL----PE-----QVDIIISEPM--GYMLFNE---RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp TEEEE--ES-CTTTCCC----SS-----CEEEEECCCC--HHHHTCH---HHHHHHHHGGGGEEEEEEEESCE
T ss_pred cEEEE--EC-chhhCcc----CC-----CeEEEEEeCc--hHhcCcH---HHHHHHHHHHHhcCCCCEEEEEe
Confidence 5544 22 2322221 11 1145555544 4555322 23445554457789997777543
No 117
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=54.15 E-value=19 Score=35.23 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=71.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-CCeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-GLRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-gvpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...++.++ |..+||+|+.+.+.++.+.+++..++..+ +-.++|. ..+ .
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~~---------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~--~~D-~- 179 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKYK---------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IED-A- 179 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTCT---------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESC-H-
T ss_pred CCEEEEEcCCccH----HHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE--Ecc-H-
Confidence 4579999999885 555666533 35799999999988888877765442223 1234443 211 1
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhH--HHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHH
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDL--RLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVE 343 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~--~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~e 343 (459)
.+ .+.-.++ ++|++|.....+. ...+ ..+++.+ +.|+|.-+++++.+.....+ +.+.+
T Consensus 180 -~~-------~l~~~~~~fDvIi~d~~~p~~~------~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~---~~~~~ 242 (321)
T 2pt6_A 180 -SK-------FLENVTNTYDVIIVDSSDPIGP------AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHV---GTIKN 242 (321)
T ss_dssp -HH-------HHHHCCSCEEEEEEECCCSSSG------GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCH---HHHHH
T ss_pred -HH-------HHhhcCCCceEEEECCcCCCCc------chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCH---HHHHH
Confidence 01 0100112 5667775321111 0111 4667666 57899988888755332222 23333
Q ss_pred HHHHHHHHHHhh
Q 048299 344 AVDHYGAIFDSL 355 (459)
Q Consensus 344 aL~~YsalFDsL 355 (459)
.+......|...
T Consensus 243 ~~~~l~~~F~~v 254 (321)
T 2pt6_A 243 MIGYAKKLFKKV 254 (321)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHHHCCCe
Confidence 333444445443
No 118
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=53.67 E-value=62 Score=31.28 Aligned_cols=113 Identities=14% Similarity=0.100 Sum_probs=60.0
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
.+|++...-.+ .-+|+|+|.|.|. +...++.+ + .-+++||+.+ +.++.+.++ ++..|++
T Consensus 28 ~ai~~~~~~~~-~~~VLDiGcGtG~----ls~~la~~-g---------~~~v~~vD~s-~~~~~a~~~----~~~~~~~~ 87 (328)
T 1g6q_1 28 NAIIQNKDLFK-DKIVLDVGCGTGI----LSMFAAKH-G---------AKHVIGVDMS-SIIEMAKEL----VELNGFSD 87 (328)
T ss_dssp HHHHHHHHHHT-TCEEEEETCTTSH----HHHHHHHT-C---------CSEEEEEESS-THHHHHHHH----HHHTTCTT
T ss_pred HHHHhhHhhcC-CCEEEEecCccHH----HHHHHHHC-C---------CCEEEEEChH-HHHHHHHHH----HHHcCCCC
Confidence 34555444343 4589999999984 33445543 3 2389999987 455544333 3444553
Q ss_pred -EEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEE
Q 048299 257 -FQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIA 326 (459)
Q Consensus 257 -FeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~ 326 (459)
.+|. .. +.+++. +...+=++|+.+.+ .+.+..+ ..++.+|+.+ +-|+|.-+++.
T Consensus 88 ~i~~~--~~-d~~~~~--------~~~~~~D~Ivs~~~--~~~l~~~---~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 88 KITLL--RG-KLEDVH--------LPFPKVDIIISEWM--GYFLLYE---SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TEEEE--ES-CTTTSC--------CSSSCEEEEEECCC--BTTBSTT---CCHHHHHHHHHHHEEEEEEEES
T ss_pred CEEEE--EC-chhhcc--------CCCCcccEEEEeCc--hhhcccH---HHHHHHHHHHHhhcCCCeEEEE
Confidence 4443 22 222222 11011145555544 2333222 2466777776 67899976663
No 119
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=52.04 E-value=28 Score=30.84 Aligned_cols=18 Identities=11% Similarity=0.230 Sum_probs=14.8
Q ss_pred chhHHHHHHHhCCCcccc
Q 048299 395 RFDSWEMILRSCGYSNVP 412 (459)
Q Consensus 395 ~~~~W~~r~~~aGF~~~~ 412 (459)
+.+.|...++.+||+.+.
T Consensus 158 ~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp CHHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHCCCEEEE
Confidence 557888999999998765
No 120
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=51.87 E-value=43 Score=32.80 Aligned_cols=104 Identities=16% Similarity=0.148 Sum_probs=59.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-.|+|+|.|.|. +...|+.+ + .-+++||+.+ +.++.+.++ ++..|++ .+|.. . +.
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~-g---------~~~v~gvD~s-~~l~~a~~~----~~~~~~~~~v~~~~--~-d~ 124 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA-G---------ARKVIGIECS-SISDYAVKI----VKANKLDHVVTIIK--G-KV 124 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT-T---------CSEEEEEECS-THHHHHHHH----HHHTTCTTTEEEEE--S-CT
T ss_pred CCEEEEEeccchH----HHHHHHHC-C---------CCEEEEECcH-HHHHHHHHH----HHHcCCCCcEEEEE--C-cH
Confidence 4469999999984 45556654 3 3589999988 455554443 4455665 56552 2 23
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
+.+.. + ..+=++|+.|++. +.+... ...+.+|+.+ |-|+|.-+++.+.
T Consensus 125 ~~~~~----~----~~~fD~Iis~~~~--~~l~~~---~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 125 EEVEL----P----VEKVDIIISEWMG--YCLFYE---SMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp TTCCC----S----SSCEEEEEECCCB--BTBTBT---CCHHHHHHHHHHHEEEEEEEESCE
T ss_pred HHccC----C----CCceEEEEEcccc--ccccCc---hhHHHHHHHHHHhCCCCCEEcccc
Confidence 33221 1 0111455555442 333222 2477888887 7799997776443
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=51.23 E-value=29 Score=29.30 Aligned_cols=53 Identities=9% Similarity=0.042 Sum_probs=36.4
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+. + ..++|||+.+...++.+.+++.
T Consensus 26 ~~~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~-~----------~~~v~~vD~~~~~~~~a~~~~~ 78 (183)
T 2yxd_A 26 VSIGKLNLNK-DDVVVDVGCGSGG----MTVEIAK-R----------CKFVYAIDYLDGAIEVTKQNLA 78 (183)
T ss_dssp HHHHHHCCCT-TCEEEEESCCCSH----HHHHHHT-T----------SSEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHcCCCC-CCEEEEeCCCCCH----HHHHHHh-c----------CCeEEEEeCCHHHHHHHHHHHH
Confidence 4555554444 5689999999986 4444444 2 3589999999888877766554
No 122
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=50.75 E-value=31 Score=31.42 Aligned_cols=58 Identities=14% Similarity=0.071 Sum_probs=40.1
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
.|++.+.-.+ .-.|+|+|.|.|. +...|+.+-+ |..++++++.+.+.++.+.+++.++
T Consensus 84 ~i~~~~~~~~-~~~vldiG~G~G~----~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~ 141 (255)
T 3mb5_A 84 LIVAYAGISP-GDFIVEAGVGSGA----LTLFLANIVG--------PEGRVVSYEIREDFAKLAWENIKWA 141 (255)
T ss_dssp HHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHhhCCCC-CCEEEEecCCchH----HHHHHHHHhC--------CCeEEEEEecCHHHHHHHHHHHHHc
Confidence 5666655444 5689999999884 4445555422 3568999999988888777666543
No 123
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=50.69 E-value=32 Score=33.20 Aligned_cols=72 Identities=8% Similarity=0.004 Sum_probs=51.6
Q ss_pred CCCcchhhHhHHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 166 TPFIRFSHLTANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 166 ~P~~kfa~ftaNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
-+=.++.|-+....|++.+.-.+ .-.|+|+|.|.|. +...|+.+-+ |.-++++|+.+...++.+.++
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~~-g~~VLDiG~G~G~----~~~~la~~~g--------~~~~v~~vD~~~~~~~~a~~~ 149 (336)
T 2b25_A 83 KRGTAITFPKDINMILSMMDINP-GDTVLEAGSGSGG----MSLFLSKAVG--------SQGRVISFEVRKDHHDLAKKN 149 (336)
T ss_dssp CCSSCCCCHHHHHHHHHHHTCCT-TCEEEEECCTTSH----HHHHHHHHHC--------TTCEEEEEESSHHHHHHHHHH
T ss_pred cCCCcccCHHHHHHHHHhcCCCC-CCEEEEeCCCcCH----HHHHHHHHhC--------CCceEEEEeCCHHHHHHHHHH
Confidence 34455677776777888776554 5689999999984 3444554433 356899999999999888888
Q ss_pred HHHHH
Q 048299 246 LLKFA 250 (459)
Q Consensus 246 L~~fA 250 (459)
+.++-
T Consensus 150 ~~~~~ 154 (336)
T 2b25_A 150 YKHWR 154 (336)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 87764
No 124
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=50.62 E-value=19 Score=31.44 Aligned_cols=56 Identities=11% Similarity=0.182 Sum_probs=29.1
Q ss_pred HHHHHhhh-CCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQV-GQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~g-~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.+++.+.. .+ .-+|+|+|.|.|. +...|+.+. |..++|||+.+...++.+.+++..
T Consensus 20 ~~~~~l~~~~~-~~~vLDiG~G~G~----~~~~l~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~ 76 (215)
T 4dzr_A 20 EAIRFLKRMPS-GTRVIDVGTGSGC----IAVSIALAC---------PGVSVTAVDLSMDALAVARRNAER 76 (215)
T ss_dssp HHHHHHTTCCT-TEEEEEEESSBCH----HHHHHHHHC---------TTEEEEEEECC-------------
T ss_pred HHHHHhhhcCC-CCEEEEecCCHhH----HHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHH
Confidence 34444444 44 7799999999985 444454432 357999999988777766655443
No 125
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=50.09 E-value=80 Score=29.77 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=73.3
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-CeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-LRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-vpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.| .+...++.++ |.-+||+|+.++..++.+.+++.+++..++ =.+++. ..+-.+
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~~---------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~--~~D~~~ 140 (275)
T 1iy9_A 76 PEHVLVVGGGDG----GVIREILKHP---------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ--VDDGFM 140 (275)
T ss_dssp CCEEEEESCTTC----HHHHHHTTCT---------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE--ESCSHH
T ss_pred CCEEEEECCchH----HHHHHHHhCC---------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE--ECcHHH
Confidence 457999999988 3555666543 356899999999999888888877654332 134443 221111
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHHHHHH
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVEAVDH 347 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~eaL~~ 347 (459)
.+. . .. ..=++++++... +..... . --...|++.+ +.|+|.-++++....-.. -...+.+.+..
T Consensus 141 ~l~------~-~~-~~fD~Ii~d~~~--~~~~~~-~-l~~~~~~~~~~~~L~pgG~lv~~~~~~~~---~~~~~~~~~~~ 205 (275)
T 1iy9_A 141 HIA------K-SE-NQYDVIMVDSTE--PVGPAV-N-LFTKGFYAGIAKALKEDGIFVAQTDNPWF---TPELITNVQRD 205 (275)
T ss_dssp HHH------T-CC-SCEEEEEESCSS--CCSCCC-C-CSTTHHHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHH
T ss_pred HHh------h-CC-CCeeEEEECCCC--CCCcch-h-hhHHHHHHHHHHhcCCCcEEEEEcCCccc---cHHHHHHHHHH
Confidence 010 0 00 111566666543 211110 0 0023566655 579999887776432111 14455555555
Q ss_pred HHHHHHh
Q 048299 348 YGAIFDS 354 (459)
Q Consensus 348 YsalFDs 354 (459)
...+|..
T Consensus 206 l~~~F~~ 212 (275)
T 1iy9_A 206 VKEIFPI 212 (275)
T ss_dssp HHTTCSE
T ss_pred HHHhCCC
Confidence 5555554
No 126
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=50.00 E-value=49 Score=30.18 Aligned_cols=58 Identities=17% Similarity=0.079 Sum_probs=34.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~ 260 (459)
.=+|+|+|.|.| .+...||.+. |..++|||+.+.+.+-+...+..+-++..|++ .+|.
T Consensus 25 ~~~vLDiGCG~G----~~~~~la~~~---------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~ 83 (225)
T 3p2e_A 25 DRVHIDLGTGDG----RNIYKLAIND---------QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFV 83 (225)
T ss_dssp SEEEEEETCTTS----HHHHHHHHTC---------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEE
T ss_pred CCEEEEEeccCc----HHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 457999999888 4566666543 35899999988444422222222233445654 5664
No 127
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=49.58 E-value=95 Score=31.82 Aligned_cols=64 Identities=13% Similarity=-0.036 Sum_probs=40.5
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHH---HHHHHHHHcC
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGE---RLLKFAQSLG 254 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~---rL~~fA~~lg 254 (459)
..|++.+.-.. .-.|+|+|.|.|.+-.. ||.+.+ ..+++||+.+...++.+.. .+.+-++..|
T Consensus 232 ~~ml~~l~l~~-g~~VLDLGCGsG~la~~----LA~~~g---------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G 297 (433)
T 1u2z_A 232 SDVYQQCQLKK-GDTFMDLGSGVGNCVVQ----AALECG---------CALSFGCEIMDDASDLTILQYEELKKRCKLYG 297 (433)
T ss_dssp HHHHHHTTCCT-TCEEEEESCTTSHHHHH----HHHHHC---------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCC-CCEEEEeCCCcCHHHHH----HHHHCC---------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC
Confidence 45666665444 56799999998865443 444333 2489999998777665533 3344455667
Q ss_pred C
Q 048299 255 L 255 (459)
Q Consensus 255 v 255 (459)
+
T Consensus 298 l 298 (433)
T 1u2z_A 298 M 298 (433)
T ss_dssp B
T ss_pred C
Confidence 4
No 128
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=49.15 E-value=69 Score=28.85 Aligned_cols=53 Identities=9% Similarity=-0.081 Sum_probs=35.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
.-+|+|+|.|.|. +...|+.+. +. ++|||+.+...++.+.++ ++..+...+|.
T Consensus 61 ~~~vLDiGcGtG~----~~~~l~~~~---------~~-~v~gvD~s~~~l~~a~~~----~~~~~~~v~~~ 113 (236)
T 1zx0_A 61 GGRVLEVGFGMAI----AASKVQEAP---------ID-EHWIIECNDGVFQRLRDW----APRQTHKVIPL 113 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHHTSC---------EE-EEEEEECCHHHHHHHHHH----GGGCSSEEEEE
T ss_pred CCeEEEEeccCCH----HHHHHHhcC---------CC-eEEEEcCCHHHHHHHHHH----HHhcCCCeEEE
Confidence 6789999999983 444454322 23 899999998888776653 34445555554
No 129
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=47.29 E-value=52 Score=28.52 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=37.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~ 260 (459)
.-.|+|+|.|.| .+...|+.+-+ |.-++|||+.+...++.+.+++. ..|+ .++|.
T Consensus 23 ~~~vLDlGcG~G----~~~~~l~~~~~--------~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~v~~~ 79 (197)
T 3eey_A 23 GDTVVDATCGNG----NDTAFLASLVG--------ENGRVFGFDIQDKAIANTTKKLT----DLNLIDRVTLI 79 (197)
T ss_dssp TCEEEESCCTTS----HHHHHHHHHHC--------TTCEEEEECSCHHHHHHHHHHHH----HTTCGGGEEEE
T ss_pred CCEEEEcCCCCC----HHHHHHHHHhC--------CCCEEEEEECCHHHHHHHHHHHH----HcCCCCCeEEE
Confidence 347999999998 34455665532 22399999999888887776654 3455 35544
No 130
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=45.68 E-value=40 Score=29.52 Aligned_cols=53 Identities=17% Similarity=0.112 Sum_probs=35.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
.-+|+|+|.|.|. +...|+.+ + + -++|||+.+...++.+.+++ +..|+..+|.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~-~-------~--~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~ 102 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL-G-------A--KEVICVEVDKEAVDVLIENL----GEFKGKFKVF 102 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT-T-------C--SEEEEEESCHHHHHHHHHHT----GGGTTSEEEE
T ss_pred cCEEEEeeCCCCH----HHHHHHHc-C-------C--CEEEEEECCHHHHHHHHHHH----HHcCCCEEEE
Confidence 4589999999987 44455554 2 1 18999999988887766654 3445555544
No 131
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=45.56 E-value=26 Score=31.30 Aligned_cols=55 Identities=15% Similarity=0.129 Sum_probs=36.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-+|+|+|.+.|.- ...|+.+- |+..+||+|+.+...++.+.+++. ..|++ .+|.
T Consensus 65 ~~~vLdiG~G~G~~----~~~la~~~--------~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~ 121 (225)
T 3tr6_A 65 AKKVIDIGTFTGYS----AIAMGLAL--------PKDGTLITCDVDEKSTALAKEYWE----KAGLSDKIGLR 121 (225)
T ss_dssp CSEEEEECCTTSHH----HHHHHTTC--------CTTCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCEEEEeCCcchHH----HHHHHHhC--------CCCCEEEEEeCCHHHHHHHHHHHH----HCCCCCceEEE
Confidence 44899999998853 23344432 235799999999888877766553 44554 5554
No 132
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=45.35 E-value=72 Score=27.83 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=31.2
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
+++.+.. + .-.|+|+|.|.|. +...| + . -++|||+.+...++.+.+++
T Consensus 29 ~l~~~~~-~-~~~vLdiG~G~G~----~~~~l----~------~---~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 29 ALKGLLP-P-GESLLEVGAGTGY----WLRRL----P------Y---PQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHTTCC-C-CSEEEEETCTTCH----HHHHC----C------C---SEEEEECCCHHHHHHHHHHC
T ss_pred HHHHhcC-C-CCeEEEECCCCCH----hHHhC----C------C---CeEEEEeCCHHHHHHHHHhC
Confidence 4444433 3 5589999999884 22223 3 2 28999999988777666554
No 133
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=45.34 E-value=42 Score=31.05 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=41.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
..|++.+.-.. .-.|+|+|.|.|. +...|+.+-+ |..++++|+.+.+.++.+.+++..+
T Consensus 89 ~~i~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFP-GARVLEAGAGSGA----LTLSLLRAVG--------PAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHHC--------TTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-CCEEEEEcccccH----HHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 45666665444 5579999999884 4455555433 3458999999988888887776554
No 134
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=45.31 E-value=36 Score=29.25 Aligned_cols=43 Identities=16% Similarity=0.130 Sum_probs=31.6
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
-+|+|+|.|.|. +...|+.+ + -+||||+.+.+.++.+.+++.+
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-~----------~~v~~vD~s~~~l~~a~~~~~~ 66 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-S----------KKVYAFDVQEQALGKTSQRLSD 66 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-S----------SEEEEEESCHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCH----HHHHHHHh-C----------CEEEEEECCHHHHHHHHHHHHH
Confidence 369999999885 33445554 3 3799999999888887776654
No 135
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=44.52 E-value=61 Score=27.01 Aligned_cols=44 Identities=14% Similarity=-0.056 Sum_probs=31.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.-+|+|+|.|.|. +...|+.+ + + . +|||+.+...++.+.+++..
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~-~-------~-~--v~~vD~~~~~~~~a~~~~~~ 85 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE-G-------W-E--AVLVEKDPEAVRLLKENVRR 85 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT-T-------C-E--EEEECCCHHHHHHHHHHHHH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC-C-------C-e--EEEEeCCHHHHHHHHHHHHH
Confidence 4479999999984 44455543 2 2 3 99999998888777666543
No 136
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=43.30 E-value=46 Score=30.12 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=40.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
..|++.+.-.+ .-+|+|+|.|.|. +...|+.+-+ |.-++|+++.+...++.+.+++..+
T Consensus 86 ~~~~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~~ 144 (258)
T 2pwy_A 86 SAMVTLLDLAP-GMRVLEAGTGSGG----LTLFLARAVG--------EKGLVESYEARPHHLAQAERNVRAF 144 (258)
T ss_dssp HHHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCC-CCEEEEECCCcCH----HHHHHHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 45666665444 5689999999874 4445555422 3459999999988888777766543
No 137
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=42.89 E-value=39 Score=30.19 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=39.7
Q ss_pred HHHHHHhh--hCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 178 QAILESLQ--VGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 178 qAILEA~~--g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
..+++.+. -.+ .-+|+|+|.|.|..-. .|+.+-+ .+..|..++|+|+.+.+.++.+.+++.+.
T Consensus 68 ~~~~~~l~~~~~~-~~~VLdiG~G~G~~~~----~la~~~~----~~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 132 (227)
T 2pbf_A 68 ALSLKRLINVLKP-GSRAIDVGSGSGYLTV----CMAIKMN----VLENKNSYVIGLERVKDLVNFSLENIKRD 132 (227)
T ss_dssp HHHHHHHTTTSCT-TCEEEEESCTTSHHHH----HHHHHTT----TTTCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCC-CCEEEEECCCCCHHHH----HHHHHhc----ccCCCCCEEEEEeCCHHHHHHHHHHHHHc
Confidence 35566663 222 5689999999885333 3333221 00125679999999988888877776543
No 138
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=42.86 E-value=1.5e+02 Score=29.43 Aligned_cols=119 Identities=18% Similarity=0.076 Sum_probs=67.9
Q ss_pred HHHHHHHHhhh------CCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 176 ANQAILESLQV------GQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 176 aNqAILEA~~g------~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
....+++.+.. .+ .-+|+|+|.|.|.- ...|+.+ + .+||+|+.+...++.+.+++.
T Consensus 215 ~t~~ll~~l~~~l~~~~~~-~~~VLDlGcG~G~~----~~~la~~-g----------~~V~gvDis~~al~~A~~n~~-- 276 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVR-GRQVLDLGAGYGAL----TLPLARM-G----------AEVVGVEDDLASVLSLQKGLE-- 276 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTT-TCEEEEETCTTSTT----HHHHHHT-T----------CEEEEEESBHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHhhcccCCC-CCEEEEEeeeCCHH----HHHHHHc-C----------CEEEEEECCHHHHHHHHHHHH--
Confidence 34556666632 22 45899999999863 3334443 3 289999999888887776654
Q ss_pred HHHcCCeEEEEEeecCCCCCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 250 AQSLGLRFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 250 A~~lgvpFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
..++..+|. ..+ ..... ..-..=+.|+.|..+ |+.... .......+++.+ +.|+|.-.+++..
T Consensus 277 --~~~~~v~~~--~~D-~~~~~--------~~~~~fD~Ii~npp~--~~~~~~-~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 277 --ANALKAQAL--HSD-VDEAL--------TEEARFDIIVTNPPF--HVGGAV-ILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp --HTTCCCEEE--ECS-TTTTS--------CTTCCEEEEEECCCC--CTTCSS-CCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HcCCCeEEE--Ecc-hhhcc--------ccCCCeEEEEECCch--hhcccc-cHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 456666655 222 22111 000111566667664 553221 223455666655 6789996665543
No 139
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=41.93 E-value=43 Score=30.59 Aligned_cols=38 Identities=26% Similarity=0.341 Sum_probs=34.2
Q ss_pred CCCeEEEeEecCC----HHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 223 PPPMLRITGTGND----IEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 223 gpp~LRIT~i~~~----~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
|||..|||...++ ...|+++-+.+.+..+..|..|.|+
T Consensus 133 gaP~Y~i~~~~~Dkk~g~~~L~~aie~i~~~I~~~gG~~~v~ 174 (188)
T 1yz7_A 133 GAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLL 174 (188)
T ss_dssp STTEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCcEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 8999999999887 4578999999999999999999998
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=41.33 E-value=45 Score=29.42 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=37.8
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.+++.+.-.+ .-+|+|+|.|.|.--.. |+.+.+ |.-++|+|+.+...++.+.+++.+
T Consensus 68 ~~~~~~~~~~-~~~vLdiG~G~G~~~~~----l~~~~~--------~~~~v~~vD~~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKP-GMKVLEIGTGCGYHAAV----TAEIVG--------EDGLVVSIERIPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCT-TCEEEEECCTTSHHHHH----HHHHHC--------TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCC-CCEEEEECCCccHHHHH----HHHHhC--------CCCEEEEEeCCHHHHHHHHHHHHH
Confidence 4555554444 56899999988754333 333322 345899999998888877766654
No 141
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=40.96 E-value=48 Score=29.55 Aligned_cols=63 Identities=11% Similarity=0.059 Sum_probs=42.7
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR- 256 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp- 256 (459)
..+++.+.-.+ .-.|+|+|.|.|. +...|+.+ + -++|||+.+.+.++.+.++ ++..|++
T Consensus 45 ~~~l~~l~~~~-~~~vLDlGcG~G~----~~~~la~~-~----------~~v~~vD~s~~~~~~a~~~----~~~~g~~~ 104 (204)
T 3njr_A 45 ALTLAALAPRR-GELLWDIGGGSGS----VSVEWCLA-G----------GRAITIEPRADRIENIQKN----IDTYGLSP 104 (204)
T ss_dssp HHHHHHHCCCT-TCEEEEETCTTCH----HHHHHHHT-T----------CEEEEEESCHHHHHHHHHH----HHHTTCTT
T ss_pred HHHHHhcCCCC-CCEEEEecCCCCH----HHHHHHHc-C----------CEEEEEeCCHHHHHHHHHH----HHHcCCCC
Confidence 34566665454 5579999998874 44456655 4 2799999998888776655 4455776
Q ss_pred -EEEE
Q 048299 257 -FQFH 260 (459)
Q Consensus 257 -FeF~ 260 (459)
++|.
T Consensus 105 ~v~~~ 109 (204)
T 3njr_A 105 RMRAV 109 (204)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 6654
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=40.68 E-value=73 Score=27.00 Aligned_cols=45 Identities=18% Similarity=0.023 Sum_probs=31.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.-+|+|+|.|.|.- ...++.++ .-++|||+.+...++.+.+++..
T Consensus 45 ~~~vLD~GcG~G~~----~~~~~~~~----------~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 45 GGMALDLYSGSGGL----AIEAVSRG----------MDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp SCEEEETTCTTCHH----HHHHHHTT----------CSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEeCCccCHH----HHHHHHcC----------CCEEEEEECCHHHHHHHHHHHHH
Confidence 45799999998863 22344432 24899999998888877666544
No 143
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=40.20 E-value=27 Score=32.53 Aligned_cols=54 Identities=19% Similarity=0.213 Sum_probs=35.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~ 260 (459)
.-+|+|+|.|.|.--..|-+ .. |..+||+|+.+...++.+.++. +.+|+. .+|.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~----~~---------~~~~v~~vD~s~~~~~~a~~~~----~~~~l~~v~~~ 135 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKI----VR---------PELELVLVDATRKKVAFVERAI----EVLGLKGARAL 135 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHH----HC---------TTCEEEEEESCHHHHHHHHHHH----HHHTCSSEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHH----HC---------CCCEEEEEECCHHHHHHHHHHH----HHhCCCceEEE
Confidence 55899999998874333322 21 3578999999988887766554 445664 5554
No 144
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=40.14 E-value=24 Score=33.82 Aligned_cols=73 Identities=19% Similarity=0.210 Sum_probs=49.4
Q ss_pred HHHHhhccCCCcchh-hHhHHHHH----HHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEe
Q 048299 158 CYLSLNQITPFIRFS-HLTANQAI----LESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGT 232 (459)
Q Consensus 158 a~~~f~~~~P~~kfa-~ftaNqAI----LEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i 232 (459)
.+..-+.+.|=-+++ ||..|+.| ++++.-.. . +|+|+|.|.|. |-..|+.+.. ++|+|
T Consensus 12 ~~~~~~~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~-~-~VLEIG~G~G~----lt~~L~~~~~-----------~V~av 74 (271)
T 3fut_A 12 ALLERHGLFADKRFGQNFLVSEAHLRRIVEAARPFT-G-PVFEVGPGLGA----LTRALLEAGA-----------EVTAI 74 (271)
T ss_dssp HHHHHTTCCCSTTSSCCEECCHHHHHHHHHHHCCCC-S-CEEEECCTTSH----HHHHHHHTTC-----------CEEEE
T ss_pred HHHHhcCCCccccCCccccCCHHHHHHHHHhcCCCC-C-eEEEEeCchHH----HHHHHHHcCC-----------EEEEE
Confidence 334445667777777 46656554 44555455 6 99999999884 6667776532 69999
Q ss_pred cCCHHHHHHHHHHHH
Q 048299 233 GNDIEILQRTGERLL 247 (459)
Q Consensus 233 ~~~~~~l~etg~rL~ 247 (459)
+.+.+.++...+++.
T Consensus 75 Eid~~~~~~l~~~~~ 89 (271)
T 3fut_A 75 EKDLRLRPVLEETLS 89 (271)
T ss_dssp ESCGGGHHHHHHHTT
T ss_pred ECCHHHHHHHHHhcC
Confidence 998877776666553
No 145
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=39.48 E-value=73 Score=29.27 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=32.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-.|+|+|.|.|. +...|+.+.. . +||||+.+...++.+.+++.
T Consensus 50 ~~~vLDlG~G~G~----~~~~la~~~~---------~-~v~gvDi~~~~~~~a~~n~~ 93 (259)
T 3lpm_A 50 KGKIIDLCSGNGI----IPLLLSTRTK---------A-KIVGVEIQERLADMAKRSVA 93 (259)
T ss_dssp CCEEEETTCTTTH----HHHHHHTTCC---------C-EEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEcCCchhH----HHHHHHHhcC---------C-cEEEEECCHHHHHHHHHHHH
Confidence 5579999999984 4446666542 2 99999999888877766653
No 146
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=39.26 E-value=46 Score=31.36 Aligned_cols=54 Identities=9% Similarity=0.137 Sum_probs=38.1
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.|++++.-.. .-+|+|+|.|.|. |-..|+.+. -++|+|+.+.+.++...+++..
T Consensus 20 ~iv~~~~~~~-~~~VLEIG~G~G~----lt~~La~~~-----------~~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 20 KIVSAIHPQK-TDTLVEIGPGRGA----LTDYLLTEC-----------DNLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp HHHHHHCCCT-TCEEEEECCTTTT----THHHHTTTS-----------SEEEEEECCHHHHHHHHHHHTT
T ss_pred HHHHhcCCCC-cCEEEEEcccccH----HHHHHHHhC-----------CEEEEEECCHHHHHHHHHHHhh
Confidence 3666665444 5689999999986 455666542 2799999998888777666543
No 147
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=39.18 E-value=1.2e+02 Score=27.34 Aligned_cols=44 Identities=9% Similarity=-0.160 Sum_probs=30.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-.|+|+|.|.|.-=. .|+ +.+ + .+||||+.+...++.+.+++.
T Consensus 57 ~~~vLDlGcG~G~~~~----~l~-~~~-------~--~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 57 GELLIDIGSGPTIYQL----LSA-CES-------F--TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp EEEEEEESCTTCCGGG----TTG-GGT-------E--EEEEEEESCHHHHHHHHHHHT
T ss_pred CCEEEEECCCccHHHH----HHh-hcc-------c--CeEEEecCCHHHHHHHHHHHh
Confidence 6789999999874211 122 222 2 689999999888887766653
No 148
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=38.95 E-value=1.6e+02 Score=28.72 Aligned_cols=46 Identities=7% Similarity=-0.017 Sum_probs=31.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
-=+|+|+|.|.|. ...++ +|..++ -+||||+.+.+.++.+.+++.+
T Consensus 123 g~rVLDIGcG~G~-~ta~~--lA~~~g----------a~V~gIDis~~~l~~Ar~~~~~ 168 (298)
T 3fpf_A 123 GERAVFIGGGPLP-LTGIL--LSHVYG----------MRVNVVEIEPDIAELSRKVIEG 168 (298)
T ss_dssp TCEEEEECCCSSC-HHHHH--HHHTTC----------CEEEEEESSHHHHHHHHHHHHH
T ss_pred cCEEEEECCCccH-HHHHH--HHHccC----------CEEEEEECCHHHHHHHHHHHHh
Confidence 4478999887753 33333 344443 3899999999999888776654
No 149
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=38.94 E-value=51 Score=29.33 Aligned_cols=57 Identities=16% Similarity=0.140 Sum_probs=38.2
Q ss_pred HHHHHhh--hCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQ--VGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~--g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.+++.+. -.+ .-+|+|+|.+.|..-. .|+.+-+ |..++|+|+.+...++.+.+++.+
T Consensus 66 ~~l~~l~~~~~~-~~~vLDiG~G~G~~~~----~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHE-GAKALDVGSGSGILTA----CFARMVG--------CTGKVIGIDHIKELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCT-TCEEEEETCTTSHHHH----HHHHHHC--------TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-CCEEEEEcCCcCHHHH----HHHHHhC--------CCcEEEEEeCCHHHHHHHHHHHHh
Confidence 5566664 233 5689999998885433 3443332 345899999998888887776654
No 150
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=38.31 E-value=1.3e+02 Score=29.30 Aligned_cols=111 Identities=15% Similarity=0.090 Sum_probs=60.1
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-- 255 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-- 255 (459)
.+|++.+.-.+ .-.|+|+|.|.|. +...++.+ + .-+++||+.+. .++.+.+++ +..|+
T Consensus 54 ~~i~~~~~~~~-~~~VLDiGcGtG~----ls~~la~~-g---------~~~v~gvD~s~-~~~~a~~~~----~~~~~~~ 113 (340)
T 2fyt_A 54 DFIYQNPHIFK-DKVVLDVGCGTGI----LSMFAAKA-G---------AKKVLGVDQSE-ILYQAMDII----RLNKLED 113 (340)
T ss_dssp HHHHHCGGGTT-TCEEEEETCTTSH----HHHHHHHT-T---------CSEEEEEESST-HHHHHHHHH----HHTTCTT
T ss_pred HHHHhhhhhcC-CCEEEEeeccCcH----HHHHHHHc-C---------CCEEEEEChHH-HHHHHHHHH----HHcCCCC
Confidence 45555544444 5589999999984 44455553 3 24899999874 565554443 33444
Q ss_pred eEEEEEeecCCCCCCccccccccccccCCCCeEEEehh-hhhhhhccCCCChhHHHHHHHH-HhcCCCeEEE
Q 048299 256 RFQFHPLLLMNDDPTSVAFYLPSALTILPDETLAVNCM-LFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTI 325 (459)
Q Consensus 256 pFeF~~v~~~~~e~~~~~~~l~~~l~~~~~EaLaVN~~-~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~ 325 (459)
..+|. .. +.+++. +....=++|+.|.+ +.+++. ..++.+|+.+ +-|+|.-+++
T Consensus 114 ~i~~~--~~-d~~~~~--------~~~~~~D~Ivs~~~~~~l~~~------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 114 TITLI--KG-KIEEVH--------LPVEKVDVIISEWMGYFLLFE------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TEEEE--ES-CTTTSC--------CSCSCEEEEEECCCBTTBTTT------CHHHHHHHHHHHHEEEEEEEE
T ss_pred cEEEE--Ee-eHHHhc--------CCCCcEEEEEEcCchhhccCH------HHHHHHHHHHHhhcCCCcEEE
Confidence 34443 22 222222 11011145555553 223322 2466788776 6789987665
No 151
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=37.92 E-value=59 Score=30.21 Aligned_cols=58 Identities=17% Similarity=0.153 Sum_probs=39.3
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
..|++.+.-.. .-.|+|+|.|.|. +...|+.+-+ |..++|+++.+.+.++.+.+++..
T Consensus 102 ~~i~~~~~~~~-~~~VLDiG~G~G~----~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~~ 159 (277)
T 1o54_A 102 SFIAMMLDVKE-GDRIIDTGVGSGA----MCAVLARAVG--------SSGKVFAYEKREEFAKLAESNLTK 159 (277)
T ss_dssp HHHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHTT--------TTCEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC-CCEEEEECCcCCH----HHHHHHHHhC--------CCcEEEEEECCHHHHHHHHHHHHH
Confidence 35566655444 5589999999874 4445555432 345999999998888777666543
No 152
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=37.73 E-value=57 Score=30.97 Aligned_cols=53 Identities=9% Similarity=0.084 Sum_probs=37.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-.|+|+|.|.|. +.-.|+.+ . ..++|||+.+.+.++.+.+++ +..|+. .+|.
T Consensus 124 ~~~vLDlG~GsG~----~~~~la~~-~---------~~~v~~vDis~~al~~A~~n~----~~~~l~~~v~~~ 178 (284)
T 1nv8_A 124 IKTVADIGTGSGA----IGVSVAKF-S---------DAIVFATDVSSKAVEIARKNA----ERHGVSDRFFVR 178 (284)
T ss_dssp CCEEEEESCTTSH----HHHHHHHH-S---------SCEEEEEESCHHHHHHHHHHH----HHTTCTTSEEEE
T ss_pred CCEEEEEeCchhH----HHHHHHHC-C---------CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE
Confidence 4579999999984 44455554 2 468999999998888777664 345664 6665
No 153
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=37.69 E-value=76 Score=26.75 Aligned_cols=54 Identities=17% Similarity=0.155 Sum_probs=35.3
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.+++.+.-.+ .-+|+|+|.|.|. +...++. . + .++|+|+.+...++.+.+++..
T Consensus 24 ~~~~~~~~~~-~~~vldiG~G~G~----~~~~l~~--~------~---~~v~~~D~~~~~~~~a~~~~~~ 77 (192)
T 1l3i_A 24 LIMCLAEPGK-NDVAVDVGCGTGG----VTLELAG--R------V---RRVYAIDRNPEAISTTEMNLQR 77 (192)
T ss_dssp HHHHHHCCCT-TCEEEEESCTTSH----HHHHHHT--T------S---SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCC-CCEEEEECCCCCH----HHHHHHH--h------c---CEEEEEECCHHHHHHHHHHHHH
Confidence 4444444444 5689999998874 3334443 1 2 5899999998888777666543
No 154
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=37.34 E-value=1.5e+02 Score=29.21 Aligned_cols=108 Identities=20% Similarity=0.122 Sum_probs=59.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~~v~~~~~ 267 (459)
.-.|+|.|.|.|. +.-.++.+.. .-+|+|++.+...++.+.+++. ..|+ ..+|.. . +.
T Consensus 218 ~~~vLD~gCGsG~----~~i~~a~~~~---------~~~v~g~Dis~~~l~~A~~n~~----~~gl~~~i~~~~--~-D~ 277 (373)
T 3tm4_A 218 GGSVLDPMCGSGT----ILIELALRRY---------SGEIIGIEKYRKHLIGAEMNAL----AAGVLDKIKFIQ--G-DA 277 (373)
T ss_dssp SCCEEETTCTTCH----HHHHHHHTTC---------CSCEEEEESCHHHHHHHHHHHH----HTTCGGGCEEEE--C-CG
T ss_pred CCEEEEccCcCcH----HHHHHHHhCC---------CCeEEEEeCCHHHHHHHHHHHH----HcCCCCceEEEE--C-Ch
Confidence 5579999999884 4444554321 2379999999988888777654 4465 455542 1 11
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChh-HHHHHHHHHh-cCCCeEEEE
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRD-LRLFLHKIKA-LNPRVVTIA 326 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~-~~~~L~~ir~-L~P~iv~~~ 326 (459)
..+. +....=++|+.|-++.. ++........ ...+++.++. |++.+++++
T Consensus 278 ~~~~--------~~~~~fD~Ii~npPyg~-r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 278 TQLS--------QYVDSVDFAISNLPYGL-KIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGG--------GTCSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCC--------cccCCcCEEEECCCCCc-ccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 1111 11112257888877653 2211101112 2567777766 666666554
No 155
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=37.33 E-value=67 Score=28.71 Aligned_cols=63 Identities=21% Similarity=0.203 Sum_probs=41.4
Q ss_pred HHHHHhh--hCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 179 AILESLQ--VGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 179 AILEA~~--g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
.+++.+. -.+ .-+|+|+|.|.|..=..|.+.+... + ..+.-++|+|+.+.+.++.+.+++.+.
T Consensus 73 ~~~~~l~~~~~~-~~~VLdiG~G~G~~~~~la~~~~~~-~------~~~~~~v~~vD~~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 73 FALEYLRDHLKP-GARILDVGSGSGYLTACFYRYIKAK-G------VDADTRIVGIEHQAELVRRSKANLNTD 137 (227)
T ss_dssp HHHHHTTTTCCT-TCEEEEESCTTSHHHHHHHHHHHHS-C------CCTTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-CCEEEEECCCccHHHHHHHHhcccc-c------CCccCEEEEEEcCHHHHHHHHHHHHhc
Confidence 4556653 222 4589999998887544444433211 2 334569999999998888888877654
No 156
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=36.26 E-value=29 Score=33.23 Aligned_cols=51 Identities=12% Similarity=0.187 Sum_probs=35.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.+.|.|.|.+.|--=-++--.|+..-+ ..++..+|+|++-+...|+.+.+.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~-----~~~~~~~I~atDis~~~L~~Ar~~ 156 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALG-----MAPGRWKVFASDIDTEVLEKARSG 156 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHC-----SCTTSEEEEEEESCHHHHHHHHHT
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcc-----cCCCCeEEEEEECCHHHHHHHHhc
Confidence 799999999998643344444555422 022257999999999888877664
No 157
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=35.92 E-value=82 Score=30.10 Aligned_cols=68 Identities=10% Similarity=0.100 Sum_probs=43.8
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL 255 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv 255 (459)
.-..+++.+.-.+ .-+|+|+|.|.|. +...|+.+. ++.-++|||+.+.+.++.+.+++. ..|+
T Consensus 63 ~~~~l~~~l~~~~-~~~VLDiGcG~G~----~~~~la~~~--------~~~~~v~gvD~s~~~~~~a~~~~~----~~g~ 125 (317)
T 1dl5_A 63 LMALFMEWVGLDK-GMRVLEIGGGTGY----NAAVMSRVV--------GEKGLVVSVEYSRKICEIAKRNVE----RLGI 125 (317)
T ss_dssp HHHHHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHH--------CTTCEEEEEESCHHHHHHHHHHHH----HTTC
T ss_pred HHHHHHHhcCCCC-cCEEEEecCCchH----HHHHHHHhc--------CCCCEEEEEECCHHHHHHHHHHHH----HcCC
Confidence 3445666665454 5689999988873 445555542 224689999999888877766553 4454
Q ss_pred e-EEEE
Q 048299 256 R-FQFH 260 (459)
Q Consensus 256 p-FeF~ 260 (459)
+ .+|.
T Consensus 126 ~~v~~~ 131 (317)
T 1dl5_A 126 ENVIFV 131 (317)
T ss_dssp CSEEEE
T ss_pred CCeEEE
Confidence 3 4544
No 158
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=35.62 E-value=87 Score=27.62 Aligned_cols=105 Identities=13% Similarity=0.033 Sum_probs=58.1
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC---eEEEEEeecCCC
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL---RFQFHPLLLMND 267 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv---pFeF~~v~~~~~ 267 (459)
-.|+|+|.|.|.- ...++.+ + . -++|||+.+.+.++.+.+++. ..|+ ..+|. .. +.
T Consensus 55 ~~vLDlGcGtG~~----~~~~~~~-~------~---~~v~gvD~s~~~l~~a~~~~~----~~~~~~~~v~~~--~~-d~ 113 (201)
T 2ift_A 55 SECLDGFAGSGSL----GFEALSR-Q------A---KKVTFLELDKTVANQLKKNLQ----TLKCSSEQAEVI--NQ-SS 113 (201)
T ss_dssp CEEEETTCTTCHH----HHHHHHT-T------C---SEEEEECSCHHHHHHHHHHHH----HTTCCTTTEEEE--CS-CH
T ss_pred CeEEEcCCccCHH----HHHHHHc-c------C---CEEEEEECCHHHHHHHHHHHH----HhCCCccceEEE--EC-CH
Confidence 4689999988842 2223332 2 1 389999999988888776654 3455 35544 11 11
Q ss_pred CCCccccccccccccCC-CCeEEEehhhhhhhhccCCCChhHHHHHHHHHh---cCCCeEEEEecCCC
Q 048299 268 DPTSVAFYLPSALTILP-DETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKA---LNPRVVTIAEREAS 331 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~-~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~---L~P~iv~~~E~ea~ 331 (459)
.... + .+.-.. =++|+.|..+ | . ...+.+++.+.+ |+|.-+++++....
T Consensus 114 ~~~~-----~-~~~~~~~fD~I~~~~~~--~-~------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 114 LDFL-----K-QPQNQPHFDVVFLDPPF--H-F------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHHT-----T-SCCSSCCEEEEEECCCS--S-S------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHH-----H-hhccCCCCCEEEECCCC--C-C------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 1100 0 000011 1355555553 2 1 145678888865 99997666655443
No 159
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=35.49 E-value=83 Score=31.58 Aligned_cols=100 Identities=19% Similarity=0.233 Sum_probs=52.7
Q ss_pred EEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCCCc
Q 048299 192 HILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDPTS 271 (459)
Q Consensus 192 HIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~~~ 271 (459)
+|+|+|.|.| ++--+|.+.| . -+++||+.+. .++. ..+.++..|+.=... ++..+.++++
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aG-------A--~~V~ave~s~-~~~~----a~~~~~~n~~~~~i~-~i~~~~~~~~ 145 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAG-------A--RRVYAVEASA-IWQQ----AREVVRFNGLEDRVH-VLPGPVETVE 145 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTT-------C--SEEEEEECST-THHH----HHHHHHHTTCTTTEE-EEESCTTTCC
T ss_pred EEEEeCCCcc-----HHHHHHHHhC-------C--CEEEEEeChH-HHHH----HHHHHHHcCCCceEE-EEeeeeeeec
Confidence 4889988887 4445666765 2 3899999763 2222 233445556543333 2223344443
Q ss_pred cccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEE
Q 048299 272 VAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTI 325 (459)
Q Consensus 272 ~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~ 325 (459)
+ +... ++|+-+++ -+-|+.+ +.++.++... |-|+|.-+++
T Consensus 146 l----pe~~-----DvivsE~~--~~~l~~e---~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 L----PEQV-----DAIVSEWM--GYGLLHE---SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp C----SSCE-----EEEECCCC--BTTBTTT---CSHHHHHHHHHHHEEEEEEEE
T ss_pred C----Cccc-----cEEEeecc--ccccccc---chhhhHHHHHHhhCCCCceEC
Confidence 1 2111 23333333 2333332 2578888877 5678876554
No 160
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=35.47 E-value=68 Score=24.38 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=24.2
Q ss_pred CCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 224 PPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 224 pp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
--.+||||| |...-++....-...|+.+||...|.
T Consensus 41 dleiritgv--peqvrkelakeaerlakefnitvtyt 75 (85)
T 2kl8_A 41 DLEIRITGV--PEQVRKELAKEAERLAKEFNITVTYT 75 (85)
T ss_dssp CEEEEEESC--CHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eeEEEEecC--hHHHHHHHHHHHHHHHHhcCeEEEEE
Confidence 347999998 44444455555556688889988887
No 161
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=35.35 E-value=74 Score=28.12 Aligned_cols=100 Identities=16% Similarity=0.012 Sum_probs=56.5
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEEEeecCCCCC
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFHPLLLMNDDP 269 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~~v~~~~~e~ 269 (459)
-+|+|+|.|.|.--. .++.+ + . -+||+|+.+...++.+.+++. ..|+ ..+|. .. +...
T Consensus 56 ~~vLDlgcG~G~~~~----~l~~~-~-------~--~~V~~vD~s~~~l~~a~~~~~----~~~~~~v~~~--~~-D~~~ 114 (202)
T 2fpo_A 56 AQCLDCFAGSGALGL----EALSR-Y-------A--AGATLIEMDRAVSQQLIKNLA----TLKAGNARVV--NS-NAMS 114 (202)
T ss_dssp CEEEETTCTTCHHHH----HHHHT-T-------C--SEEEEECSCHHHHHHHHHHHH----HTTCCSEEEE--CS-CHHH
T ss_pred CeEEEeCCCcCHHHH----HHHhc-C-------C--CEEEEEECCHHHHHHHHHHHH----HcCCCcEEEE--EC-CHHH
Confidence 469999998885322 22222 2 1 289999999988887776654 3455 34444 11 1111
Q ss_pred CccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHHHh---cCCCeEEEEecC
Q 048299 270 TSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKIKA---LNPRVVTIAERE 329 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~ir~---L~P~iv~~~E~e 329 (459)
.+...++ +.|++|..| | . . ....+++.+.. |+|.-+++++..
T Consensus 115 ---------~~~~~~~~fD~V~~~~p~--~-~-~-----~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 115 ---------FLAQKGTPHNIVFVDPPF--R-R-G-----LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ---------HHSSCCCCEEEEEECCSS--S-T-T-----THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ---------HHhhcCCCCCEEEECCCC--C-C-C-----cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 0111111 466666553 2 1 1 25567777776 999976666544
No 162
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=35.31 E-value=36 Score=31.58 Aligned_cols=43 Identities=21% Similarity=0.256 Sum_probs=31.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-+|+|+|.|.|. +...|+.+. -++|||+.+.+.++.+.+++.
T Consensus 31 ~~~VLDiG~G~G~----lt~~l~~~~-----------~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 31 HDNIFEIGSGKGH----FTLELVQRC-----------NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHS-----------SEEEEECSCHHHHHHHHHHTT
T ss_pred CCEEEEEeCCchH----HHHHHHHcC-----------CeEEEEECCHHHHHHHHHhhc
Confidence 4589999999985 445555432 279999999887776665553
No 163
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=35.30 E-value=48 Score=30.14 Aligned_cols=54 Identities=19% Similarity=0.098 Sum_probs=34.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~ 260 (459)
.-+|+|+|.|.|.-=. .|+.+. |..++|||+.+...++.+.++. +..|+ ..+|.
T Consensus 71 ~~~vLDiG~G~G~~~~----~la~~~---------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~ 125 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSL----PIKICF---------PHLHVTIVDSLNKRITFLEKLS----EALQLENTTFC 125 (240)
T ss_dssp CCEEEEECSSSCTTHH----HHHHHC---------TTCEEEEEESCHHHHHHHHHHH----HHHTCSSEEEE
T ss_pred CCEEEEecCCCCHHHH----HHHHhC---------CCCEEEEEeCCHHHHHHHHHHH----HHcCCCCEEEE
Confidence 4589999999886322 233322 2458999999988777765554 34465 35554
No 164
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=35.23 E-value=98 Score=26.15 Aligned_cols=104 Identities=12% Similarity=0.119 Sum_probs=59.3
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-.|+|+|.|.|. +...++.+ + .-++|||+.+.+.++.+.+++ +..|++ .+|. .. +.
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~----~~~~~~~~~~~~--~~-d~ 90 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSR-G---------MSAAVLVEKNRKAQAIIQDNI----IMTKAENRFTLL--KM-EA 90 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHT-T---------CCEEEEECCCHHHHHHHHHHH----HTTTCGGGEEEE--CS-CH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C---------CCEEEEEECCHHHHHHHHHHH----HHcCCCCceEEE--EC-cH
Confidence 4479999999885 33445554 2 258999999988887766654 345654 5544 11 11
Q ss_pred CCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH---HhcCCCeEEEEecCCCC
Q 048299 268 DPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI---KALNPRVVTIAEREASH 332 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i---r~L~P~iv~~~E~ea~~ 332 (459)
.+. +...++ +.++.|..+... ..+.+++.+ +-|+|.-+++++.....
T Consensus 91 ~~~---------~~~~~~~fD~i~~~~~~~~~---------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 91 ERA---------IDCLTGRFDLVFLDPPYAKE---------TIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHH---------HHHBCSCEEEEEECCSSHHH---------HHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHh---------HHhhcCCCCEEEECCCCCcc---------hHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 110 100111 466666654211 234455555 66899977777655443
No 165
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=35.11 E-value=2.3e+02 Score=24.80 Aligned_cols=98 Identities=16% Similarity=0.183 Sum_probs=56.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDDP 269 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e~ 269 (459)
.-.|+|+|.|.|. +...|+.+ + + ++|||+.+...++.+.+++ -+ .+|. .. +...
T Consensus 41 ~~~vLdiG~G~G~----~~~~l~~~-~------~----~v~~~D~s~~~~~~a~~~~------~~--~~~~--~~-d~~~ 94 (239)
T 3bxo_A 41 ASSLLDVACGTGT----HLEHFTKE-F------G----DTAGLELSEDMLTHARKRL------PD--ATLH--QG-DMRD 94 (239)
T ss_dssp CCEEEEETCTTSH----HHHHHHHH-H------S----EEEEEESCHHHHHHHHHHC------TT--CEEE--EC-CTTT
T ss_pred CCeEEEecccCCH----HHHHHHHh-C------C----cEEEEeCCHHHHHHHHHhC------CC--CEEE--EC-CHHH
Confidence 5689999999884 34445543 3 2 8999999888777665543 12 3333 11 2222
Q ss_pred CccccccccccccCCCC-eEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEe
Q 048299 270 TSVAFYLPSALTILPDE-TLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAE 327 (459)
Q Consensus 270 ~~~~~~l~~~l~~~~~E-aLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E 327 (459)
.. . ++. -+|+.+...+||+.. ......+|+.+ +.|+|.-.++++
T Consensus 95 ~~----------~-~~~~D~v~~~~~~~~~~~~---~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 95 FR----------L-GRKFSAVVSMFSSVGYLKT---TEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CC----------C-SSCEEEEEECTTGGGGCCS---HHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cc----------c-CCCCcEEEEcCchHhhcCC---HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 11 1 122 233323335788742 13466777776 568999766664
No 166
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=34.71 E-value=57 Score=29.19 Aligned_cols=54 Identities=6% Similarity=0.103 Sum_probs=36.4
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~ 260 (459)
.-.|+|+|.|.|. +...||.+. |..++|||+.+...++.+.+++. ..|++ ++|.
T Consensus 39 ~~~vLDiGcG~G~----~~~~la~~~---------p~~~v~giD~s~~~l~~a~~~~~----~~~~~nv~~~ 93 (213)
T 2fca_A 39 NPIHIEVGTGKGQ----FISGMAKQN---------PDINYIGIELFKSVIVTAVQKVK----DSEAQNVKLL 93 (213)
T ss_dssp CCEEEEECCTTSH----HHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHH----HSCCSSEEEE
T ss_pred CceEEEEecCCCH----HHHHHHHHC---------CCCCEEEEEechHHHHHHHHHHH----HcCCCCEEEE
Confidence 4569999999885 344455543 34689999999888887766543 34553 4544
No 167
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=34.53 E-value=68 Score=30.67 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=37.5
Q ss_pred HHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 177 NQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 177 NqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.+.|++++.-.+ .-.|+|+|.|.|.-- ..|+.+ + + ++|||+.+...++.+.+++.
T Consensus 31 ~~~i~~~~~~~~-~~~VLDiG~G~G~lt----~~La~~-~------~----~v~~vDi~~~~~~~a~~~~~ 85 (299)
T 2h1r_A 31 LDKIIYAAKIKS-SDIVLEIGCGTGNLT----VKLLPL-A------K----KVITIDIDSRMISEVKKRCL 85 (299)
T ss_dssp HHHHHHHHCCCT-TCEEEEECCTTSTTH----HHHTTT-S------S----EEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC-cCEEEEEcCcCcHHH----HHHHhc-C------C----EEEEEECCHHHHHHHHHHHH
Confidence 345666665443 558999999998743 445544 2 1 79999999888877766553
No 168
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=33.30 E-value=72 Score=27.62 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=30.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-.|+|+|.|.|. +...|+.+ + +. ++|||+.+...++.+.+++.
T Consensus 43 ~~~vLdiGcG~G~----~~~~l~~~-~-------~~--~v~~~D~s~~~~~~a~~~~~ 86 (215)
T 2pxx_A 43 EDRILVLGCGNSA----LSYELFLG-G-------FP--NVTSVDYSSVVVAAMQACYA 86 (215)
T ss_dssp TCCEEEETCTTCS----HHHHHHHT-T-------CC--CEEEEESCHHHHHHHHHHTT
T ss_pred CCeEEEECCCCcH----HHHHHHHc-C-------CC--cEEEEeCCHHHHHHHHHhcc
Confidence 5679999998875 33344443 2 22 89999999888877766654
No 169
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=32.82 E-value=73 Score=29.25 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=35.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
...|+|+|.|.|. ++..||.+. |...++||+.+...++.+.+++.+.
T Consensus 47 ~~~vLDiGcG~G~----~~~~la~~~---------p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 47 QVEFADIGCGYGG----LLVELSPLF---------PDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp CEEEEEETCTTCH----HHHHHGGGS---------TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCeEEEEccCCcH----HHHHHHHHC---------CCCeEEEEECCHHHHHHHHHHHHHH
Confidence 6789999998884 455566543 3468999999998998888776654
No 170
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=32.80 E-value=82 Score=28.46 Aligned_cols=113 Identities=12% Similarity=0.023 Sum_probs=60.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~~v~~~~~e 268 (459)
.-.|+|+|.|.|. +...||.+. |..+++||+.+...++.+.++. +..|+ .++|. .. +..
T Consensus 35 ~~~vLDiGcG~G~----~~~~lA~~~---------p~~~v~giD~s~~~l~~a~~~~----~~~~l~nv~~~--~~-Da~ 94 (218)
T 3dxy_A 35 APVTLEIGFGMGA----SLVAMAKDR---------PEQDFLGIEVHSPGVGACLASA----HEEGLSNLRVM--CH-DAV 94 (218)
T ss_dssp CCEEEEESCTTCH----HHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHH----HHTTCSSEEEE--CS-CHH
T ss_pred CCeEEEEeeeChH----HHHHHHHHC---------CCCeEEEEEecHHHHHHHHHHH----HHhCCCcEEEE--EC-CHH
Confidence 5579999999884 344455433 3568999999988887766554 44555 35543 21 111
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEecC
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAERE 329 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~e 329 (459)
++ ++.. +.++ +.|.+|+..-.++.......--...+|+.+ +.|+|.-++++.-+
T Consensus 95 ~~-----l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 95 EV-----LHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HH-----HHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HH-----HHHH--cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 10 0001 1223 455566433222221100000013577777 45999987776554
No 171
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=32.70 E-value=51 Score=28.74 Aligned_cols=53 Identities=15% Similarity=0.013 Sum_probs=35.2
Q ss_pred EEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEE
Q 048299 191 IHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFH 260 (459)
Q Consensus 191 VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~ 260 (459)
-+|+|+|.|.|.--..|.+ +. |..++|+|+.+...++.+.+++ +..|++ .+|.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~----~~---------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~v~~~ 120 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSI----VR---------PEAHFTLLDSLGKRVRFLRQVQ----HELKLENIEPV 120 (207)
T ss_dssp SEEEEETCTTTTTHHHHHH----HC---------TTSEEEEEESCHHHHHHHHHHH----HHTTCSSEEEE
T ss_pred CeEEEECCCCCHHHHHHHH----HC---------CCCEEEEEeCCHHHHHHHHHHH----HHcCCCCeEEE
Confidence 4799999999965444433 21 2358999999988777665554 345664 5554
No 172
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=32.24 E-value=74 Score=29.57 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=36.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe-EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR-FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp-FeF~ 260 (459)
.-+|+|+|.|.|. +...|+... |..++|+|+.+...++.+.++... .|++ .+|.
T Consensus 110 ~~~vLDlG~GsG~----~~~~la~~~---------~~~~v~~vD~s~~~l~~a~~n~~~----~~~~~v~~~ 164 (276)
T 2b3t_A 110 PCRILDLGTGTGA----IALALASER---------PDCEIIAVDRMPDAVSLAQRNAQH----LAIKNIHIL 164 (276)
T ss_dssp CCEEEEETCTTSH----HHHHHHHHC---------TTSEEEEECSSHHHHHHHHHHHHH----HTCCSEEEE
T ss_pred CCEEEEecCCccH----HHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHH----cCCCceEEE
Confidence 5689999999885 333444332 245899999998888877766543 4654 4443
No 173
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=31.85 E-value=1e+02 Score=29.78 Aligned_cols=132 Identities=11% Similarity=0.102 Sum_probs=70.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-CCeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-GLRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-gvpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...|+.+ +|.-+||+|+.+...++.+.+++.+.+..+ +-.++|. ..+
T Consensus 109 ~~~VLdIG~G~G~----~~~~l~~~---------~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~--~~D--- 170 (314)
T 2b2c_A 109 PKRVLIIGGGDGG----ILREVLKH---------ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF--CGD--- 170 (314)
T ss_dssp CCEEEEESCTTSH----HHHHHTTC---------TTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE--CSC---
T ss_pred CCEEEEEcCCcCH----HHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE--ECh---
Confidence 4579999999884 55556543 246799999999988888777664432222 1234443 111
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhH--HHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHHH
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDL--RLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFVE 343 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~--~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~e 343 (459)
..+ .+.-.++ ++|++|.. +++... ..+ ..+++.+ +.|+|.-+++++.+.-.. -...+..
T Consensus 171 ~~~-------~l~~~~~~fD~Ii~d~~---~~~~~~---~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~ 234 (314)
T 2b2c_A 171 GFE-------FLKNHKNEFDVIITDSS---DPVGPA---ESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAH 234 (314)
T ss_dssp HHH-------HHHHCTTCEEEEEECCC-------------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHH
T ss_pred HHH-------HHHhcCCCceEEEEcCC---CCCCcc---hhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHH
Confidence 111 0111112 56666664 222111 111 4667666 578999888776532221 1344555
Q ss_pred HHHHHHHHHHhh
Q 048299 344 AVDHYGAIFDSL 355 (459)
Q Consensus 344 aL~~YsalFDsL 355 (459)
...+...+|...
T Consensus 235 ~~~~l~~vF~~v 246 (314)
T 2b2c_A 235 LVAFNRKIFPAV 246 (314)
T ss_dssp HHHHHHHHCSEE
T ss_pred HHHHHHHHCCcc
Confidence 566666666543
No 174
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=30.48 E-value=58 Score=28.89 Aligned_cols=55 Identities=11% Similarity=0.092 Sum_probs=35.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-+|+|+|.+.|.- ...|+.+- |+.-+||+|+.+...++.+.+++. ..|++ .+|.
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~~--------~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~ 115 (223)
T 3duw_A 59 ARNILEIGTLGGYS----TIWLARGL--------SSGGRVVTLEASEKHADIARSNIE----RANLNDRVEVR 115 (223)
T ss_dssp CSEEEEECCTTSHH----HHHHHTTC--------CSSCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCEEEEecCCccHH----HHHHHHhC--------CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE
Confidence 45799999988843 23344432 335699999999888877666553 44552 5554
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=30.14 E-value=1.8e+02 Score=27.82 Aligned_cols=133 Identities=13% Similarity=0.173 Sum_probs=71.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHH-cC-CeEEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQS-LG-LRFQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~-lg-vpFeF~~v~~~~~ 267 (459)
.-+|+|+|.|.|. +...|+.++ |.-+||+|+.+.+.++.+.+++...... ++ -.++|. ..+-.
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~~---------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~--~~D~~ 148 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRHK---------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV--IDDGV 148 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTCT---------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEE--CSCSC
T ss_pred CCEEEEEeCChhH----HHHHHHhCC---------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEE--EChHH
Confidence 4579999999885 555666543 3569999999988888888877665421 11 123333 22211
Q ss_pred CCCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhH--HHHHHHH-HhcCCCeEEEEecCCCCCCcchHHHHH
Q 048299 268 DPTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDL--RLFLHKI-KALNPRVVTIAEREASHNHPLFLQRFV 342 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~--~~~L~~i-r~L~P~iv~~~E~ea~~n~~~F~~RF~ 342 (459)
+.+. -.++ ++|++++.... - .. ..+ ..|++.+ +.|+|.-++++..++....+ +.+.
T Consensus 149 ~~l~----------~~~~~fDvIi~D~~~p~--~-~~---~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~ 209 (294)
T 3adn_A 149 NFVN----------QTSQTFDVIISDCTDPI--G-PG---ESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAI 209 (294)
T ss_dssp C-------------CCCCCEEEEEECC----------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHH
T ss_pred HHHh----------hcCCCccEEEECCCCcc--C-cc---hhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHH
Confidence 1111 1112 56777665211 1 11 112 5677666 57899977777554332222 3444
Q ss_pred HHHHHHHHHHHhhh
Q 048299 343 EAVDHYGAIFDSLE 356 (459)
Q Consensus 343 eaL~~YsalFDsLe 356 (459)
+.+......|....
T Consensus 210 ~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 210 DSHRKLSHYFSDVG 223 (294)
T ss_dssp HHHHHHHHHCSEEE
T ss_pred HHHHHHHHHCCCeE
Confidence 55555556666544
No 176
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=29.71 E-value=92 Score=29.46 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=35.5
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
+.|++++.-.+ .-+|+|+|.|.|.--..|. .+ + + ++|||+.+...++.+.+++
T Consensus 18 ~~i~~~~~~~~-~~~VLDiG~G~G~lt~~L~----~~-~------~----~v~~vD~~~~~~~~a~~~~ 70 (285)
T 1zq9_A 18 NSIIDKAALRP-TDVVLEVGPGTGNMTVKLL----EK-A------K----KVVACELDPRLVAELHKRV 70 (285)
T ss_dssp HHHHHHTCCCT-TCEEEEECCTTSTTHHHHH----HH-S------S----EEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCCC-CCEEEEEcCcccHHHHHHH----hh-C------C----EEEEEECCHHHHHHHHHHH
Confidence 34555554443 5589999999997554443 33 3 2 8999999987777665554
No 177
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=29.69 E-value=90 Score=27.23 Aligned_cols=55 Identities=15% Similarity=0.142 Sum_probs=37.4
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
..+++.+.-.+ .-+|+|+|.|.|.. ...|+.+ + -++|+|+.+...++.+.+++.+
T Consensus 67 ~~~~~~l~~~~-~~~vLdiG~G~G~~----~~~la~~-~----------~~v~~vD~~~~~~~~a~~~~~~ 121 (210)
T 3lbf_A 67 ARMTELLELTP-QSRVLEIGTGSGYQ----TAILAHL-V----------QHVCSVERIKGLQWQARRRLKN 121 (210)
T ss_dssp HHHHHHTTCCT-TCEEEEECCTTSHH----HHHHHHH-S----------SEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC-CCEEEEEcCCCCHH----HHHHHHh-C----------CEEEEEecCHHHHHHHHHHHHH
Confidence 34455555454 66899999998853 3334443 3 2799999998888887776654
No 178
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=29.57 E-value=55 Score=28.54 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=31.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-.|+|+|.|.|. +...|+.+ + .-++|||+.+...++.+.+++.
T Consensus 52 ~~~vlD~gcG~G~----~~~~l~~~-~---------~~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 52 GRSVIDAGTGNGI----LACGSYLL-G---------AESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp TSEEEEETCTTCH----HHHHHHHT-T---------BSEEEEEESCHHHHHHHHHHCT
T ss_pred CCEEEEEeCCccH----HHHHHHHc-C---------CCEEEEEECCHHHHHHHHHhcC
Confidence 4579999999886 44455554 2 2389999999888877766553
No 179
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=29.38 E-value=36 Score=31.36 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=36.6
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-.|+|+|.+.|.--. .|+.+- |+..+||+|+.+...++.+.+++ +..|++ .+|.
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--------~~~~~v~~vD~s~~~~~~a~~~~----~~~g~~~~v~~~ 120 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--------PADGQLLTLEADAHHAQVARENL----QLAGVDQRVTLR 120 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--------CTTCEEEEEECCHHHHHHHHHHH----HHTTCTTTEEEE
T ss_pred CCEEEEecCCchHHHH----HHHHhC--------CCCCEEEEEECCHHHHHHHHHHH----HHcCCCCcEEEE
Confidence 4579999999885433 344332 34679999999988887766554 345654 5554
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=29.10 E-value=61 Score=29.23 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=36.3
Q ss_pred HHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 178 QAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 178 qAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
..+++.+.-.+ .-.|+|+|.|.|..- ..|+.+- + .++|+|+.+...++.+.+++.
T Consensus 81 ~~~~~~l~~~~-~~~vLdiG~G~G~~~----~~la~~~-------~---~~v~~vD~~~~~~~~a~~~~~ 135 (235)
T 1jg1_A 81 AIMLEIANLKP-GMNILEVGTGSGWNA----ALISEIV-------K---TDVYTIERIPELVEFAKRNLE 135 (235)
T ss_dssp HHHHHHHTCCT-TCCEEEECCTTSHHH----HHHHHHH-------C---SCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC-CCEEEEEeCCcCHHH----HHHHHHh-------C---CEEEEEeCCHHHHHHHHHHHH
Confidence 35566664444 557999999887533 3344322 2 589999999888877766654
No 181
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=28.93 E-value=4.1e+02 Score=25.80 Aligned_cols=97 Identities=13% Similarity=0.056 Sum_probs=54.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC-eEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL-RFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv-pFeF~~v~~~~~e 268 (459)
.-.|+|+| |.|.- ...|+.+ + |..++|+|+.+...++.+.+++.+ .|+ ..+|. ..+-.+
T Consensus 173 ~~~VLDlG-G~G~~----~~~la~~-~--------~~~~v~~vDi~~~~l~~a~~~~~~----~g~~~v~~~--~~D~~~ 232 (373)
T 2qm3_A 173 NKDIFVLG-DDDLT----SIALMLS-G--------LPKRIAVLDIDERLTKFIEKAANE----IGYEDIEIF--TFDLRK 232 (373)
T ss_dssp TCEEEEES-CTTCH----HHHHHHH-T--------CCSEEEEECSCHHHHHHHHHHHHH----HTCCCEEEE--CCCTTS
T ss_pred CCEEEEEC-CCCHH----HHHHHHh-C--------CCCEEEEEECCHHHHHHHHHHHHH----cCCCCEEEE--EChhhh
Confidence 34799999 87752 2234432 2 345899999998888887776544 455 34443 222111
Q ss_pred CCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCe
Q 048299 269 PTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRV 322 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~i 322 (459)
.+. ..+. ..=++|++|.++... ....+|+.+ +.|+|.-
T Consensus 233 ~l~------~~~~-~~fD~Vi~~~p~~~~---------~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 233 PLP------DYAL-HKFDTFITDPPETLE---------AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp CCC------TTTS-SCBSEEEECCCSSHH---------HHHHHHHHHHHTBCSTT
T ss_pred hch------hhcc-CCccEEEECCCCchH---------HHHHHHHHHHHHcccCC
Confidence 121 1010 112688888765322 134666665 6789943
No 182
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=28.82 E-value=39 Score=32.80 Aligned_cols=56 Identities=29% Similarity=0.402 Sum_probs=39.6
Q ss_pred HHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 180 ILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 180 ILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
+++.+.-.. .=+|+|.|.|.|..-..|++.+ | .-++|||+.+.+.++.+.+++..+
T Consensus 18 ~l~~L~~~~-g~~vLD~g~G~G~~s~~la~~~------------~-~~~VigvD~d~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 18 VIEFLKPED-EKIILDCTVGEGGHSRAILEHC------------P-GCRIIGIDVDSEVLRIAEEKLKEF 73 (301)
T ss_dssp HHHHHCCCT-TCEEEETTCTTSHHHHHHHHHC------------T-TCEEEEEESCHHHHHHHHHHTGGG
T ss_pred HHHhcCCCC-CCEEEEEeCCcCHHHHHHHHHC------------C-CCEEEEEECCHHHHHHHHHHHHhc
Confidence 444444333 4479999999887665555432 1 358999999999999988887654
No 183
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=28.62 E-value=72 Score=28.53 Aligned_cols=41 Identities=15% Similarity=0.110 Sum_probs=31.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----------~~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----------ARWAAYDFSPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----------SEEEEEESCHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----------CEEEEEECCHHHHHHHHHh
Confidence 4579999999986 55666654 3 2899999998887776655
No 184
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=28.49 E-value=90 Score=28.79 Aligned_cols=65 Identities=22% Similarity=0.248 Sum_probs=40.4
Q ss_pred HHHHHHHHhhh--CCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc
Q 048299 176 ANQAILESLQV--GQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL 253 (459)
Q Consensus 176 aNqAILEA~~g--~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l 253 (459)
+.+.++++++. .+ .-+|+|+|.|.|. +...++. .+ + ++|||+.+...++.+.++.. ..
T Consensus 106 tt~~~~~~l~~~~~~-~~~VLDiGcG~G~----l~~~la~-~g-------~---~v~gvDi~~~~v~~a~~n~~----~~ 165 (254)
T 2nxc_A 106 TTRLALKALARHLRP-GDKVLDLGTGSGV----LAIAAEK-LG-------G---KALGVDIDPMVLPQAEANAK----RN 165 (254)
T ss_dssp HHHHHHHHHHHHCCT-TCEEEEETCTTSH----HHHHHHH-TT-------C---EEEEEESCGGGHHHHHHHHH----HT
T ss_pred HHHHHHHHHHHhcCC-CCEEEEecCCCcH----HHHHHHH-hC-------C---eEEEEECCHHHHHHHHHHHH----Hc
Confidence 34445555542 22 4579999998885 3334544 23 3 99999999888877766543 45
Q ss_pred CCeEEEE
Q 048299 254 GLRFQFH 260 (459)
Q Consensus 254 gvpFeF~ 260 (459)
|++++|.
T Consensus 166 ~~~v~~~ 172 (254)
T 2nxc_A 166 GVRPRFL 172 (254)
T ss_dssp TCCCEEE
T ss_pred CCcEEEE
Confidence 6654443
No 185
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=28.23 E-value=95 Score=27.54 Aligned_cols=53 Identities=11% Similarity=0.165 Sum_probs=35.1
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.|++.+.-.+ .-+|+|+|.|.|. +...|+.+ + -++|||+.+...++.+.+++.
T Consensus 61 ~~~~~~~~~~-~~~vLdiG~G~G~----~~~~l~~~--------~---~~v~~vD~~~~~~~~a~~~~~ 113 (231)
T 1vbf_A 61 FMLDELDLHK-GQKVLEIGTGIGY----YTALIAEI--------V---DKVVSVEINEKMYNYASKLLS 113 (231)
T ss_dssp HHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHH--------S---SEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHhcCCCC-CCEEEEEcCCCCH----HHHHHHHH--------c---CEEEEEeCCHHHHHHHHHHHh
Confidence 4555554444 5689999999876 33334432 2 389999999888877666553
No 186
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=28.15 E-value=1.3e+02 Score=26.85 Aligned_cols=52 Identities=12% Similarity=0.074 Sum_probs=36.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~ 260 (459)
.-+|+|+|.|.|. +...|+.+ + .++|||+.+...++.+.+++ +..|+ ..+|.
T Consensus 79 ~~~vLD~gcG~G~----~~~~la~~--------~---~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~ 132 (241)
T 3gdh_A 79 CDVVVDAFCGVGG----NTIQFALT--------G---MRVIAIDIDPVKIALARNNA----EVYGIADKIEFI 132 (241)
T ss_dssp CSEEEETTCTTSH----HHHHHHHT--------T---CEEEEEESCHHHHHHHHHHH----HHTTCGGGEEEE
T ss_pred CCEEEECccccCH----HHHHHHHc--------C---CEEEEEECCHHHHHHHHHHH----HHcCCCcCeEEE
Confidence 5579999999984 44445442 2 58999999988888776654 44566 46655
No 187
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=28.12 E-value=75 Score=30.72 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=39.1
Q ss_pred cCCCcchhh-HhHHHHH----HHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHH
Q 048299 165 ITPFIRFSH-LTANQAI----LESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEIL 239 (459)
Q Consensus 165 ~~P~~kfa~-ftaNqAI----LEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l 239 (459)
+.|=-+++. |..+..| ++++.-.+ .-+|+|+|.|.|. |-..|+.+.. ++|+|+.+.+.+
T Consensus 22 ~~~~k~~GQnfL~d~~i~~~Iv~~l~~~~-~~~VLEIG~G~G~----lT~~La~~~~-----------~V~aVEid~~li 85 (295)
T 3gru_A 22 FKPKKKLGQCFLIDKNFVNKAVESANLTK-DDVVLEIGLGKGI----LTEELAKNAK-----------KVYVIEIDKSLE 85 (295)
T ss_dssp --------CCEECCHHHHHHHHHHTTCCT-TCEEEEECCTTSH----HHHHHHHHSS-----------EEEEEESCGGGH
T ss_pred CCCccccCccccCCHHHHHHHHHhcCCCC-cCEEEEECCCchH----HHHHHHhcCC-----------EEEEEECCHHHH
Confidence 344445553 5555544 44544443 5589999999986 4445555432 799999998777
Q ss_pred HHHHHHHH
Q 048299 240 QRTGERLL 247 (459)
Q Consensus 240 ~etg~rL~ 247 (459)
+...+++.
T Consensus 86 ~~a~~~~~ 93 (295)
T 3gru_A 86 PYANKLKE 93 (295)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 77766654
No 188
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=27.96 E-value=1.1e+02 Score=28.26 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=37.5
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLK 248 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~ 248 (459)
.+|-++......-+|+|+|.|.|. +...|+.+. |..+||||+.+...++.+.+++..
T Consensus 26 ~lL~~~~~~~~~~~VLDlG~G~G~----~~l~la~~~---------~~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 26 MLLASLVADDRACRIADLGAGAGA----AGMAVAARL---------EKAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp HHHHHTCCCCSCEEEEECCSSSSH----HHHHHHHHC---------TTEEEEEEESSHHHHHHHHHHTTS
T ss_pred HHHHHHhcccCCCEEEEeCChHhH----HHHHHHHhC---------CCCeEEEEECCHHHHHHHHHHHHh
Confidence 344443332225689999999985 334455543 257999999998888877766543
No 189
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=27.41 E-value=1e+02 Score=28.34 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=34.4
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCC--eEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGL--RFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgv--pFeF~ 260 (459)
.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+...++.+.+++. ..|+ ..+|.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~------------~~~~~v~~iD~s~~~~~~a~~~~~----~~g~~~~i~~~ 136 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAI------------PEDGKILAMDINKENYELGLPVIK----KAGVDHKIDFR 136 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHS------------CTTCEEEEEESCCHHHHHHHHHHH----HTTCGGGEEEE
T ss_pred cCEEEEeCCCcCHHHHHHHHhC------------CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCCeEEE
Confidence 4479999998886333333322 224599999998877776665543 4565 24544
No 190
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=27.29 E-value=85 Score=28.15 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=26.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTG 243 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg 243 (459)
.-.|+|+|.|.|. +.. .|+.+- + .-+||||+.+...++++.
T Consensus 58 g~~VLDlGcGtG~-~~~---~la~~~-------~--~~~V~gvD~s~~~l~~~~ 98 (210)
T 1nt2_A 58 DERVLYLGAASGT-TVS---HLADIV-------D--EGIIYAVEYSAKPFEKLL 98 (210)
T ss_dssp SCEEEEETCTTSH-HHH---HHHHHT-------T--TSEEEEECCCHHHHHHHH
T ss_pred CCEEEEECCcCCH-HHH---HHHHHc-------C--CCEEEEEECCHHHHHHHH
Confidence 3479999999997 333 333332 1 238999999987665443
No 191
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=27.17 E-value=87 Score=28.36 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=35.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe---EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR---FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp---FeF~ 260 (459)
.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.+.++.+.+++ +..|+. ++|.
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~------------~~~~~v~~vD~~~~~~~~a~~~~----~~~g~~~~~i~~~ 114 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGL------------ADNTTLTCIDPESEHQRQAKALF----REAGYSPSRVRFL 114 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHS------------CTTSEEEEECSCHHHHHHHHHHH----HHTTCCGGGEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhC------------CCCCEEEEEECCHHHHHHHHHHH----HHcCCCcCcEEEE
Confidence 4589999988875433333322 23458999999988887765554 455665 5554
No 192
>3cw2_C Translation initiation factor 2 subunit alpha; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2aho_B 3v11_B*
Probab=26.18 E-value=70 Score=30.59 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=33.3
Q ss_pred CCCeEEEeEecCC----HHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 223 PPPMLRITGTGND----IEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 223 gpp~LRIT~i~~~----~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
|||..|||...++ ...|+++-+.+.+..+..|..|+|+
T Consensus 223 ~~P~Y~i~~~~~d~k~~~~~l~~~~~~~~~~i~~~~g~~~~~ 264 (266)
T 3cw2_C 223 GAPRYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 264 (266)
T ss_dssp SSSEEEEEEEESCHHHHHHHHHHHHHHHHHHHTTTTCCEEEC
T ss_pred cCCEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 7899999988877 4578999999999999999999986
No 193
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=26.11 E-value=80 Score=26.87 Aligned_cols=41 Identities=10% Similarity=0.249 Sum_probs=25.9
Q ss_pred CeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCC
Q 048299 225 PMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFHPLLLMNDD 268 (459)
Q Consensus 225 p~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~~v~~~~~e 268 (459)
-.+||||| |...-++....-...++.+||...|. +...++|
T Consensus 124 l~i~itgv--peqvrkelakeaerl~~efni~v~y~-imtgsle 164 (170)
T 4hhu_A 124 LVIVITGV--PEQVRKELAKEAERLKAEFNINVQYQ-IMTGSLE 164 (170)
T ss_dssp EEEEEESC--CHHHHHHHHHHHHHHHHHHTCEEEEE-EEETTEE
T ss_pred EEEEEeCC--cHHHHHHHHHHHHHHHHhcceEEEEE-EEeccee
Confidence 36888888 44444444444455567789999999 4444443
No 194
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=25.85 E-value=97 Score=29.56 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=36.9
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.|++++.-.+ .-+|+|+|.|.|.-=.. |+.+.. ....++|||+.+.+.++...++
T Consensus 33 ~iv~~~~~~~-~~~VLEIG~G~G~lt~~----La~~~~-------~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 33 AIVAAIRPER-GERMVEIGPGLGALTGP----VIARLA-------TPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp HHHHHHCCCT-TCEEEEECCTTSTTHHH----HHHHHC-------BTTBCEEEEECCHHHHHHHHHH
T ss_pred HHHHhcCCCC-cCEEEEEccccHHHHHH----HHHhCC-------CcCCeEEEEECCHHHHHHHHHh
Confidence 3555555444 56899999999975444 444322 1136799999998888777665
No 195
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=25.76 E-value=83 Score=28.65 Aligned_cols=47 Identities=23% Similarity=0.346 Sum_probs=35.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKF 249 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~f 249 (459)
.-.|+|+|.|.|. +...||.+. |..++|||+.+...++.+.+++...
T Consensus 50 ~~~vLDiGcG~G~----~~~~la~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 50 KVTIADIGCGFGG----LMIDLSPAF---------PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp CEEEEEETCTTSH----HHHHHHHHS---------TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCH----HHHHHHHhC---------CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 5689999999986 444455432 3568999999988888887776654
No 196
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=25.72 E-value=83 Score=27.97 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=30.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
.-+|+|+|.|.|. +...|+.+-+ |.-+++||+.+...++.+.++.
T Consensus 74 ~~~vLDlG~G~G~----~~~~la~~~~--------~~~~v~~vD~s~~~~~~~~~~~ 118 (227)
T 1g8a_A 74 GKSVLYLGIASGT----TASHVSDIVG--------WEGKIFGIEFSPRVLRELVPIV 118 (227)
T ss_dssp TCEEEEETTTSTT----HHHHHHHHHC--------TTSEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEEeccCCH----HHHHHHHHhC--------CCeEEEEEECCHHHHHHHHHHH
Confidence 3479999999886 4444555432 2348999999887776655443
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=25.63 E-value=1.3e+02 Score=28.38 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=61.5
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHc-CCeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSL-GLRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~l-gvpFeF~~v~~~~~e 268 (459)
.-+|+|+|.|.|. +...++.. +|.-+||+|+.+...++.+.+++...+..+ +-.+++. ..+-
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~---------~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D~-- 141 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKY---------KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF--IEDA-- 141 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTC---------TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE--ESCH--
T ss_pred CCeEEEEeCCcCH----HHHHHHHc---------CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE--ECCh--
Confidence 4579999998884 55666543 245799999999888888777664433222 1234443 2111
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhH--HHHHHHH-HhcCCCeEEEEecC
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDL--RLFLHKI-KALNPRVVTIAERE 329 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~--~~~L~~i-r~L~P~iv~~~E~e 329 (459)
.+ .+.-.++ ++|++++....+ .. ..+ ..+++.+ +.|+|.-++++..+
T Consensus 142 -~~-------~l~~~~~~fD~Ii~d~~~~~~---~~---~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 142 -SK-------FLENVTNTYDVIIVDSSDPIG---PA---ETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp -HH-------HHHHCCSCEEEEEEECCCTTT---GG---GGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred -HH-------HHHhCCCCceEEEEcCCCCCC---cc---hhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 11 0100112 566776542211 11 122 5677776 57899977776644
No 198
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=25.48 E-value=77 Score=28.79 Aligned_cols=54 Identities=11% Similarity=0.006 Sum_probs=37.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-+|+|+|.|.|.--..|.+ +.. ..++|||+.+...++.+.+++. ..|++ ++|.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~----~~~---------~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~v~~~ 121 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGA----TLN---------GWYFLATEVDDMCFNYAKKNVE----QNNLSDLIKVV 121 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHH----HHH---------CCEEEEEESCHHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred CCEEEEeCCChhHHHHHHHH----hCC---------CCeEEEEECCHHHHHHHHHHHH----HcCCCccEEEE
Confidence 55899999999865444433 322 2589999999888887776654 34554 6665
No 199
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=25.45 E-value=1.4e+02 Score=27.07 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=35.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~ 260 (459)
.-+|+|+|.+.|.-=..|.+.+ |+.-+||+|+.+.+.++.+.+++. ..|+. .+|.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~------------~~~~~v~~iD~~~~~~~~a~~~~~----~~g~~~~i~~~ 127 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSI------------PDDGKITAIDFDREAYEIGLPFIR----KAGVEHKINFI 127 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHS------------CTTCEEEEEESCHHHHHHHHHHHH----HTTCGGGEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhC------------CCCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE
Confidence 4479999998886333333222 234699999999888877665554 35653 4554
No 200
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=24.82 E-value=94 Score=27.83 Aligned_cols=41 Identities=7% Similarity=-0.001 Sum_probs=28.2
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRT 242 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~et 242 (459)
.-+|+|+|.|.|. +...|+.+-+ |.-+++||+.+...+++.
T Consensus 78 ~~~vLDlG~G~G~----~~~~la~~~g--------~~~~v~gvD~s~~~i~~~ 118 (233)
T 2ipx_A 78 GAKVLYLGAASGT----TVSHVSDIVG--------PDGLVYAVEFSHRSGRDL 118 (233)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHHC--------TTCEEEEECCCHHHHHHH
T ss_pred CCEEEEEcccCCH----HHHHHHHHhC--------CCcEEEEEECCHHHHHHH
Confidence 3479999999885 4555665543 234899999887655543
No 201
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=24.51 E-value=61 Score=28.12 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCCCCC
Q 048299 66 HMRQLLISCAELFSQADFSAAHRLISILSANSSPYGD 102 (459)
Q Consensus 66 ~L~~lLl~cAeAV~~gd~~~A~~lL~~L~~~aSp~Gd 102 (459)
.+=+.|-+|++++++||.+.|+.||..-. ..-|+||
T Consensus 57 EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gd 92 (137)
T 2ksn_A 57 EIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGA 92 (137)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCC
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCc
Confidence 57888999999999999999999997644 4457777
No 202
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=23.98 E-value=87 Score=28.97 Aligned_cols=54 Identities=13% Similarity=0.166 Sum_probs=43.4
Q ss_pred CChhHHHHHHHHHhcCCCeEEEEecCCCCCCcchHHHHHHHHHHHHHHHHhhhh
Q 048299 304 DTRDLRLFLHKIKALNPRVVTIAEREASHNHPLFLQRFVEAVDHYGAIFDSLEA 357 (459)
Q Consensus 304 ~~~~~~~~L~~ir~L~P~iv~~~E~ea~~n~~~F~~RF~eaL~~YsalFDsLea 357 (459)
+.-+.+.+++.+++.+.+..+.+|.+.......-.+-+.+++.|...+++.|..
T Consensus 236 G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~ 289 (290)
T 3tva_A 236 GDVGMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIAN 289 (290)
T ss_dssp SSSCHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceeCHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcC
Confidence 334688999999999999999999886543234688899999999999887743
No 203
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=23.28 E-value=1e+02 Score=27.82 Aligned_cols=102 Identities=9% Similarity=0.087 Sum_probs=56.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCe--EEEEEeecCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLR--FQFHPLLLMND 267 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvp--FeF~~v~~~~~ 267 (459)
.-.|+|+|.+.|.- ...|+.. . |..+||+|+.+...++.+.+++. ..|++ .+|. ..+..
T Consensus 72 ~~~vLDiG~G~G~~----~~~la~~--------~-~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~v~~~--~~d~~ 132 (232)
T 3ntv_A 72 VKNILEIGTAIGYS----SMQFASI--------S-DDIHVTTIERNETMIQYAKQNLA----TYHFENQVRII--EGNAL 132 (232)
T ss_dssp CCEEEEECCSSSHH----HHHHHTT--------C-TTCEEEEEECCHHHHHHHHHHHH----HTTCTTTEEEE--ESCGG
T ss_pred CCEEEEEeCchhHH----HHHHHHh--------C-CCCEEEEEECCHHHHHHHHHHHH----HcCCCCcEEEE--ECCHH
Confidence 45799999988853 2334441 1 25699999999888877766553 44553 5554 22111
Q ss_pred CCCccccccccccccCCCCeEEEehhhhhhhhccCCCChhHHHHHHHH-HhcCCCeEEEEec
Q 048299 268 DPTSVAFYLPSALTILPDETLAVNCMLFLHKLLKDHDTRDLRLFLHKI-KALNPRVVTIAER 328 (459)
Q Consensus 268 e~~~~~~~l~~~l~~~~~EaLaVN~~~~Lh~l~~~~~~~~~~~~L~~i-r~L~P~iv~~~E~ 328 (459)
+.+ +..+. .+=+.++++.. ......+|+.+ +.|+|.-+++++.
T Consensus 133 ~~~------~~~~~-~~fD~V~~~~~-----------~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 133 EQF------ENVND-KVYDMIFIDAA-----------KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp GCH------HHHTT-SCEEEEEEETT-----------SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHH------Hhhcc-CCccEEEEcCc-----------HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 111 00000 01134444432 11345566666 6789998877743
No 204
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=23.08 E-value=71 Score=29.82 Aligned_cols=52 Identities=15% Similarity=0.192 Sum_probs=35.6
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.|++++.-.+ .-+|+|+|.|.|. |-..|+.++ .-++|||+.+...++...++
T Consensus 22 ~iv~~~~~~~-~~~VLDiG~G~G~----lt~~L~~~~----------~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 22 KIAEELNIEE-GNTVVEVGGGTGN----LTKVLLQHP----------LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp HHHHHTTCCT-TCEEEEEESCHHH----HHHHHTTSC----------CSEEEEECCCHHHHHHHTTS
T ss_pred HHHHhcCCCC-cCEEEEEcCchHH----HHHHHHHcC----------CCeEEEEECCHHHHHHHHhc
Confidence 4555554444 5689999998875 677777653 24799999888766655443
No 205
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=22.96 E-value=1.2e+02 Score=27.37 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=30.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-.|+|+|.|.|.- ...|+.+- |+.-++|+|+.+...++.+.+++.
T Consensus 61 ~~~VLdiG~G~G~~----~~~la~~~--------~~~~~v~~vD~~~~~~~~a~~~~~ 106 (239)
T 2hnk_A 61 AKRIIEIGTFTGYS----SLCFASAL--------PEDGKILCCDVSEEWTNVARKYWK 106 (239)
T ss_dssp CSEEEEECCTTCHH----HHHHHHHS--------CTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCHH----HHHHHHhC--------CCCCEEEEEECCHHHHHHHHHHHH
Confidence 44799999887743 22344332 234599999999888877766654
No 206
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=22.73 E-value=1.1e+02 Score=26.93 Aligned_cols=46 Identities=17% Similarity=0.063 Sum_probs=30.9
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-+|+|+|.+.|. +...|+.. .|+.-+||+|+.+...++.+.+++.
T Consensus 70 ~~~vLdiG~G~G~----~~~~la~~--------~~~~~~v~~vD~~~~~~~~a~~~~~ 115 (229)
T 2avd_A 70 AKKALDLGTFTGY----SALALALA--------LPADGRVVTCEVDAQPPELGRPLWR 115 (229)
T ss_dssp CCEEEEECCTTSH----HHHHHHTT--------SCTTCEEEEEESCSHHHHHHHHHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHh--------CCCCCEEEEEECCHHHHHHHHHHHH
Confidence 4579999988774 23334442 2235699999998877777665543
No 207
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=22.64 E-value=3.8e+02 Score=26.55 Aligned_cols=61 Identities=11% Similarity=0.193 Sum_probs=38.2
Q ss_pred eEEE-EEccc--------------CCCC---CcHHHHHHHhhcccCCCCCCCCCeEEEeEecCC-------HHHHHHHHH
Q 048299 190 SIHI-LDFDI--------------MHGV---QWPPLMQALVERFKNSNMLQPPPMLRITGTGND-------IEILQRTGE 244 (459)
Q Consensus 190 ~VHI-IDf~I--------------~~G~---QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~-------~~~l~etg~ 244 (459)
+||| ||-|+ -+|+ +++.+++.++. -|.|+|.||... .+...+.-+
T Consensus 134 ~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~----------~~~l~l~Gl~~H~gs~~~~~~~~~~~~~ 203 (428)
T 2j66_A 134 RVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRS----------LQFTKFIGIHVYTGTQNLNTDSIIESMK 203 (428)
T ss_dssp EEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHH----------CTTEEEEEEECCCCSCBCCHHHHHHHHH
T ss_pred eEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHh----------CCCCCEEEEEEECCCCCCCHHHHHHHHH
Confidence 6888 88886 4676 55666665543 347999999632 344555555
Q ss_pred HHHHHHHH----cCCeEEEE
Q 048299 245 RLLKFAQS----LGLRFQFH 260 (459)
Q Consensus 245 rL~~fA~~----lgvpFeF~ 260 (459)
++.++++. .|+++++-
T Consensus 204 ~~~~~~~~l~~~~g~~~~~l 223 (428)
T 2j66_A 204 YTVDLGRNIYERYGIVCECI 223 (428)
T ss_dssp HHHHHHHHHHHHHCCCCSEE
T ss_pred HHHHHHHHHHHHhCCCCCEE
Confidence 66665544 47766543
No 208
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=22.50 E-value=1.5e+02 Score=24.66 Aligned_cols=36 Identities=25% Similarity=0.452 Sum_probs=27.8
Q ss_pred HHHHHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcc
Q 048299 176 ANQAILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERF 215 (459)
Q Consensus 176 aNqAILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~ 215 (459)
.-++|++++..+++.|+|.-+.+. .+.++++|....
T Consensus 15 ~~~~~~~~i~~A~~~I~i~~~~~~----~~~i~~aL~~a~ 50 (155)
T 1byr_A 15 ARVLVLSAIDSAKTSIRMMAYSFT----APDIMKALVAAK 50 (155)
T ss_dssp HHHHHHHHHHHCSSEEEEEESSBC----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhEEEEEEEEeC----CHHHHHHHHHHH
Confidence 357888899988779999987663 478999987644
No 209
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=22.07 E-value=78 Score=29.43 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=34.1
Q ss_pred HHHHHhhhCCceEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 179 AILESLQVGQQSIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 179 AILEA~~g~~~~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.|++.+.-.+ .-.|+|+|.|.|. +...|+.+-+ |..++|+|+.+...++.+.+++.
T Consensus 101 ~~~~~~~~~~-~~~VLD~G~G~G~----~~~~la~~~~--------~~~~v~~vD~s~~~~~~a~~~~~ 156 (275)
T 1yb2_A 101 YIIMRCGLRP-GMDILEVGVGSGN----MSSYILYALN--------GKGTLTVVERDEDNLKKAMDNLS 156 (275)
T ss_dssp -----CCCCT-TCEEEEECCTTSH----HHHHHHHHHT--------TSSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHcCCCC-cCEEEEecCCCCH----HHHHHHHHcC--------CCCEEEEEECCHHHHHHHHHHHH
Confidence 4555554444 5589999999885 3344444322 24589999999888877666553
No 210
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=21.56 E-value=94 Score=29.69 Aligned_cols=110 Identities=11% Similarity=0.129 Sum_probs=61.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcC-CeEEEEEeecCCCC
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLG-LRFQFHPLLLMNDD 268 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lg-vpFeF~~v~~~~~e 268 (459)
.-.|+|+|.|.|. +...|+..+ |..+||+|+.+...++.+.+++...+..++ -.++|. ..+ .
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~--~~D-~- 158 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRHG---------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR--VGD-G- 158 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTCT---------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE--ESC-H-
T ss_pred CCeEEEEcCCCCH----HHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE--ECc-H-
Confidence 4579999998885 555666533 356999999999999888888766655432 234443 211 1
Q ss_pred CCccccccccccccCCC--CeEEEehhhhhhhhccCCCChhH--HHHHHHH-HhcCCCeEEEEecC
Q 048299 269 PTSVAFYLPSALTILPD--ETLAVNCMLFLHKLLKDHDTRDL--RLFLHKI-KALNPRVVTIAERE 329 (459)
Q Consensus 269 ~~~~~~~l~~~l~~~~~--EaLaVN~~~~Lh~l~~~~~~~~~--~~~L~~i-r~L~P~iv~~~E~e 329 (459)
.+. .....++ ++|++|+.. +.. .. ..+ ..+++.+ +.|+|.-++++..+
T Consensus 159 -~~~------~~~~~~~~fDvIi~d~~~--~~~-~~---~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 159 -LAF------VRQTPDNTYDVVIIDTTD--PAG-PA---SKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp -HHH------HHSSCTTCEEEEEEECC---------------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred -HHH------HHhccCCceeEEEECCCC--ccc-cc---hhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 110 0000112 566776653 221 11 112 4677766 57899976666543
No 211
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=21.01 E-value=1.3e+02 Score=26.55 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=36.1
Q ss_pred eEEEEEcccC-CCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 190 SIHILDFDIM-HGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~-~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
.-.|+|+|.| .|. +...|+.+.+ .++|||+.+...++.+.+++. ..|+..+|.
T Consensus 56 ~~~vLDlG~G~~G~----~~~~la~~~~----------~~v~~vD~s~~~~~~a~~~~~----~~~~~v~~~ 109 (230)
T 3evz_A 56 GEVALEIGTGHTAM----MALMAEKFFN----------CKVTATEVDEEFFEYARRNIE----RNNSNVRLV 109 (230)
T ss_dssp SCEEEEECCTTTCH----HHHHHHHHHC----------CEEEEEECCHHHHHHHHHHHH----HTTCCCEEE
T ss_pred CCEEEEcCCCHHHH----HHHHHHHhcC----------CEEEEEECCHHHHHHHHHHHH----HhCCCcEEE
Confidence 4579999999 885 3344554422 379999999888887766543 456555554
No 212
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=20.78 E-value=1.1e+02 Score=27.22 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=31.0
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLL 247 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~ 247 (459)
.-+|+|+|.+.|.- ...|+.+- |..+||+|+.+...++.+.+++.
T Consensus 55 ~~~vLdiG~G~G~~----~~~la~~~---------~~~~v~~vD~~~~~~~~a~~~~~ 99 (233)
T 2gpy_A 55 PARILEIGTAIGYS----AIRMAQAL---------PEATIVSIERDERRYEEAHKHVK 99 (233)
T ss_dssp CSEEEEECCTTSHH----HHHHHHHC---------TTCEEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEecCCCcHH----HHHHHHHC---------CCCEEEEEECCHHHHHHHHHHHH
Confidence 44799999988742 33444432 14699999999888877766654
No 213
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=20.54 E-value=1.6e+02 Score=28.73 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=32.7
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERL 246 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL 246 (459)
.++|+|+|.|.| .+...|+.+. |..+||+|+-+...++.+.+++
T Consensus 90 ~~rVLdIG~G~G----~la~~la~~~---------p~~~v~~VEidp~vi~~Ar~~~ 133 (317)
T 3gjy_A 90 KLRITHLGGGAC----TMARYFADVY---------PQSRNTVVELDAELARLSREWF 133 (317)
T ss_dssp GCEEEEESCGGG----HHHHHHHHHS---------TTCEEEEEESCHHHHHHHHHHS
T ss_pred CCEEEEEECCcC----HHHHHHHHHC---------CCcEEEEEECCHHHHHHHHHhc
Confidence 689999999988 5666676632 1348999999988777766554
No 214
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=20.50 E-value=1.4e+02 Score=27.10 Aligned_cols=43 Identities=12% Similarity=0.164 Sum_probs=29.1
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHH
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGER 245 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~r 245 (459)
.-+|+|+|.|.|.--.. |+.+-. ..++|||+.+...++.+.++
T Consensus 86 ~~~vLdiG~G~G~~~~~----l~~~~~---------~~~v~~vD~s~~~~~~a~~~ 128 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHA----FADALP---------EITTFGLDVSKVAIKAAAKR 128 (269)
T ss_dssp CCEEEEETCTTSTTHHH----HHHTCT---------TSEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHH----HHHhCC---------CCeEEEEeCCHHHHHHHHHh
Confidence 56899999999864443 333321 23799999988777665443
No 215
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=20.36 E-value=1.3e+02 Score=27.19 Aligned_cols=53 Identities=9% Similarity=-0.063 Sum_probs=34.8
Q ss_pred eEEEEEcccCCCCCcHHHHHHHhhcccCCCCCCCCCeEEEeEecCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q 048299 190 SIHILDFDIMHGVQWPPLMQALVERFKNSNMLQPPPMLRITGTGNDIEILQRTGERLLKFAQSLGLRFQFH 260 (459)
Q Consensus 190 ~VHIIDf~I~~G~QWp~LiqaLa~R~~~~~~~~gpp~LRIT~i~~~~~~l~etg~rL~~fA~~lgvpFeF~ 260 (459)
--+|+|+|.|.|. ....++.+. |. ++|+|+.+++.++.+. +.++..+....|.
T Consensus 61 G~rVLdiG~G~G~----~~~~~~~~~---------~~-~v~~id~~~~~~~~a~----~~~~~~~~~~~~~ 113 (236)
T 3orh_A 61 GGRVLEVGFGMAI----AASKVQEAP---------ID-EHWIIECNDGVFQRLR----DWAPRQTHKVIPL 113 (236)
T ss_dssp CEEEEEECCTTSH----HHHHHTTSC---------EE-EEEEEECCHHHHHHHH----HHGGGCSSEEEEE
T ss_pred CCeEEEECCCccH----HHHHHHHhC---------Cc-EEEEEeCCHHHHHHHH----HHHhhCCCceEEE
Confidence 4579999988883 334455432 22 7899999887765543 4566667666654
Done!