BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048307
         (271 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9S845|GONS3_ARATH GDP-mannose transporter GONST3 OS=Arabidopsis thaliana GN=GONST3
           PE=2 SV=1
          Length = 372

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 108/171 (63%), Gaps = 22/171 (12%)

Query: 2   TNDEENPLIGKI-NPRIARMMTWYNSLGHRASIYGVAAGYCLSASLLAIINKWATMKFAY 60
           TNDEEN  + ++ N       TWY+    +AS+YGVAAGYCLSASLL+IINKWA MKF Y
Sbjct: 3   TNDEENGTVIEVKNVPEPSPETWYSVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPY 62

Query: 61  PEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRRFASAAIIVYLSLFANSEL---- 116
           P ALTA++Y TSA GVL C    K I+HD L  +TM RF  AA+I YLSLF NSEL    
Sbjct: 63  PGALTAMQYFTSAAGVLLCAQ-MKLIEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHA 121

Query: 117 ----------------SIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE 151
                           +I  + FLHQPWP +KTW SL TI GGSLLY+  +
Sbjct: 122 NVDTFIVFRSAVPIFVAIGETLFLHQPWPSVKTWGSLATIFGGSLLYVFTD 172



 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 78/120 (65%), Gaps = 18/120 (15%)

Query: 148 IMGEMSKLKHEITNKSDWYSFEVILPLGFSCFFG-----------------GFTVLGGAV 190
           IMGE+ K+KHEIT+++DWYS +V+LP+G SC FG                 GFTVLG  V
Sbjct: 229 IMGELKKIKHEITDETDWYSLQVVLPVGLSCLFGLAISFFGFSCRRAISATGFTVLG-IV 287

Query: 191 NKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPTNKPRAVNETEVQETWSDKAR 250
           NK L VVINL  WDKHST VGTLGLL+CM GGV YQQS   KP A  E + QE   ++ +
Sbjct: 288 NKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGVMYQQSTIKKPNATQEAKPQEQDEEQEK 347


>sp|Q84L08|GONS4_ARATH GDP-mannose transporter GONST4 OS=Arabidopsis thaliana GN=GONST4
           PE=2 SV=1
          Length = 341

 Score =  104 bits (260), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 130/310 (41%), Gaps = 102/310 (32%)

Query: 39  GYCLSASLLAIINKWATMKFAYPEALTALRYLTSAVGVLPCGSCFKFIDHDLLTFVTMRR 98
           GY L +SLLA+INK A   F YP  LTAL+YLT  V V   G     I+HD  T+ T ++
Sbjct: 20  GYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKS-GLINHDPFTWDTAKK 78

Query: 99  FASAAIIVYLSLFANSEL--------------------SIAVSPFLHQPWPLIKTWFSLL 138
           F  AAI+ YL++F N+ L                    +IA + F  QP P   T+ SL+
Sbjct: 79  FLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTVFRSQPLPSRLTFLSLV 138

Query: 139 TILGGSLLY---------------------IMGEMSKLKHEITN---------------- 161
            IL G++ Y                     I  EM  +KH ++N                
Sbjct: 139 VILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHMVSNIKLNIWGLVLYNNLLS 198

Query: 162 ----KSDWY---SFEVIL------------PLGF-----SCFFG---------------- 181
                  W+    F  +             P  F     SC FG                
Sbjct: 199 LMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASCVFGFLISYFGFAARNAISA 258

Query: 182 -GFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQS-PTNKP-RAVNE 238
             FTV  G VNK L VVIN+  WDKH+T VG + LL  + GGV YQQS   +KP   V+E
Sbjct: 259 TAFTV-TGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGGVGYQQSVKLDKPIEKVSE 317

Query: 239 TEVQETWSDK 248
            + ++   D+
Sbjct: 318 KDSEKGEEDE 327


>sp|Q9BXS9|S26A6_HUMAN Solute carrier family 26 member 6 OS=Homo sapiens GN=SLC26A6 PE=1
           SV=1
          Length = 759

 Score = 32.3 bits (72), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 172 LPLGFS-CFFGGFTVLGGAVNKSLNVVINLAFWDKHSTRVGTLGLLICMLGGVTYQQSPT 230
           LP G +     G   + G  +    V I   F       VGT  ++  M+G VT   +  
Sbjct: 105 LPQGLAYALLAGLPPVFGLYSSFYPVFIYFLFGTSRHISVGTFAVMSVMVGSVTESLA-- 162

Query: 231 NKPRAVNETEVQETWSDKAR 250
             P+A+N++ + ET  D AR
Sbjct: 163 --PQALNDSMINETARDAAR 180


>sp|Q5X3H2|KUP2_LEGPA Probable potassium transport system protein kup 2 OS=Legionella
           pneumophila (strain Paris) GN=kup2 PE=3 SV=1
          Length = 625

 Score = 31.2 bits (69), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)

Query: 94  VTMRRFASAAIIVYLSLFANSELSIAVSPFLHQPWPLIKTWFSLLTILGGSLLYIMGE-- 151
           V +  F +  I+ +L +  N ++ +A++P+    + +I  +F+L  ILGG  L + G   
Sbjct: 171 VMLVWFITIGILGFLQIIQNPKVLMAINPYYAINFFMIHKYFALF-ILGGVFLVMTGGEA 229

Query: 152 -MSKLKH--EITNKSDWYSFEVILPLGFSCFFG 181
             + L H  +   ++ W  F V LP    C+FG
Sbjct: 230 LFADLGHFGKKAIRTGW--FAVALPALLLCYFG 260


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.422 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,138,901
Number of Sequences: 539616
Number of extensions: 3660484
Number of successful extensions: 8063
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8041
Number of HSP's gapped (non-prelim): 28
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)