Query 048309
Match_columns 288
No_of_seqs 281 out of 3567
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:24:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hem_A Cyclopropane-fatty-acyl 100.0 7.4E-33 2.5E-37 244.8 25.9 210 47-260 50-302 (302)
2 2fk8_A Methoxy mycolic acid sy 100.0 2.7E-30 9.1E-35 229.9 27.3 244 16-263 12-316 (318)
3 1kpg_A CFA synthase;, cyclopro 100.0 3.2E-30 1.1E-34 226.0 23.9 211 46-260 41-287 (287)
4 2o57_A Putative sarcosine dime 99.9 8.9E-24 3.1E-28 185.8 23.1 209 47-262 56-295 (297)
5 3bus_A REBM, methyltransferase 99.9 1.2E-23 4E-28 182.7 23.2 168 48-219 40-208 (273)
6 4htf_A S-adenosylmethionine-de 99.9 8E-22 2.7E-26 172.4 16.1 228 31-263 26-281 (285)
7 3ujc_A Phosphoethanolamine N-m 99.9 3.7E-21 1.3E-25 165.8 20.0 195 53-261 39-266 (266)
8 3vc1_A Geranyl diphosphate 2-C 99.9 2E-21 6.8E-26 172.3 17.3 195 59-260 106-311 (312)
9 4gek_A TRNA (CMO5U34)-methyltr 99.9 4.6E-21 1.6E-25 165.8 16.7 124 55-180 57-183 (261)
10 3kkz_A Uncharacterized protein 99.9 2.3E-21 7.8E-26 167.9 13.0 152 57-216 33-186 (267)
11 3bkx_A SAM-dependent methyltra 99.9 1.9E-20 6.4E-25 162.6 18.3 204 48-259 22-274 (275)
12 3iv6_A Putative Zn-dependent a 99.8 1.6E-20 5.3E-25 161.9 12.1 178 29-216 8-211 (261)
13 1nkv_A Hypothetical protein YJ 99.8 1.5E-19 5E-24 155.2 17.9 120 56-177 23-142 (256)
14 3dtn_A Putative methyltransfer 99.8 2E-20 6.9E-25 158.6 9.4 120 58-180 32-153 (234)
15 1pjz_A Thiopurine S-methyltran 99.8 4.7E-20 1.6E-24 153.6 11.3 119 58-177 11-142 (203)
16 3f4k_A Putative methyltransfer 99.8 1.6E-19 5.4E-24 155.1 14.7 154 57-219 33-188 (257)
17 3dlc_A Putative S-adenosyl-L-m 99.8 2.4E-19 8.3E-24 149.7 15.0 121 55-178 30-151 (219)
18 3hnr_A Probable methyltransfer 99.8 8.8E-20 3E-24 153.1 12.1 142 32-179 6-149 (220)
19 3jwg_A HEN1, methyltransferase 99.8 4.6E-19 1.6E-23 148.8 16.5 119 57-175 17-141 (219)
20 1vl5_A Unknown conserved prote 99.8 9.4E-20 3.2E-24 157.0 12.1 158 53-216 21-180 (260)
21 3jwh_A HEN1; methyltransferase 99.8 4.6E-19 1.6E-23 148.6 14.8 119 57-175 17-141 (217)
22 3dh0_A SAM dependent methyltra 99.8 9.5E-19 3.3E-23 146.6 15.9 120 58-180 26-148 (219)
23 3ou2_A SAM-dependent methyltra 99.8 4.8E-19 1.6E-23 148.0 13.6 139 32-180 12-151 (218)
24 1xxl_A YCGJ protein; structura 99.8 2.1E-18 7.3E-23 146.9 15.8 156 57-219 9-166 (239)
25 3e23_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 144.3 15.0 133 31-179 13-145 (211)
26 4hg2_A Methyltransferase type 99.8 2.8E-19 9.7E-24 154.2 9.8 132 32-180 8-140 (257)
27 2xvm_A Tellurite resistance pr 99.8 3.1E-18 1E-22 141.1 15.4 118 60-179 23-140 (199)
28 3h2b_A SAM-dependent methyltra 99.8 2.9E-19 1E-23 148.1 8.7 139 31-180 5-146 (203)
29 1y8c_A S-adenosylmethionine-de 99.8 1.6E-18 5.4E-23 147.4 13.0 139 35-177 3-144 (246)
30 1wzn_A SAM-dependent methyltra 99.8 1.5E-18 5.3E-23 148.5 13.0 141 34-177 4-147 (252)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.3E-18 8E-23 147.4 14.1 126 50-178 74-200 (254)
32 3mgg_A Methyltransferase; NYSG 99.8 1.6E-18 5.4E-23 150.5 12.5 114 61-177 29-144 (276)
33 3lcc_A Putative methyl chlorid 99.8 1.1E-18 3.7E-23 148.1 10.7 121 57-179 55-175 (235)
34 3g5l_A Putative S-adenosylmeth 99.8 2E-18 7E-23 148.0 12.5 116 56-177 31-147 (253)
35 3g5t_A Trans-aconitate 3-methy 99.8 5.2E-18 1.8E-22 149.2 15.4 113 62-177 29-151 (299)
36 2gb4_A Thiopurine S-methyltran 99.8 1.8E-18 6.2E-23 148.7 12.1 110 67-177 66-193 (252)
37 3l8d_A Methyltransferase; stru 99.8 1.9E-18 6.3E-23 147.0 11.9 141 31-180 16-158 (242)
38 3ofk_A Nodulation protein S; N 99.8 4.8E-18 1.6E-22 142.1 13.8 115 59-177 41-156 (216)
39 3ege_A Putative methyltransfer 99.8 1.1E-18 3.7E-23 150.7 9.9 129 34-178 4-133 (261)
40 1ri5_A MRNA capping enzyme; me 99.8 7.2E-18 2.5E-22 147.6 15.1 111 67-177 62-176 (298)
41 2gs9_A Hypothetical protein TT 99.8 2.3E-18 8E-23 143.5 11.3 132 35-179 3-136 (211)
42 3dli_A Methyltransferase; PSI- 99.8 6.5E-18 2.2E-22 143.8 14.1 134 67-219 39-176 (240)
43 2p7i_A Hypothetical protein; p 99.8 2.1E-18 7.2E-23 146.8 10.7 133 33-179 11-145 (250)
44 2yqz_A Hypothetical protein TT 99.8 3.1E-18 1E-22 147.3 11.7 135 34-174 4-140 (263)
45 2ex4_A Adrenal gland protein A 99.8 6E-18 2E-22 144.2 13.4 111 69-180 79-190 (241)
46 3m70_A Tellurite resistance pr 99.8 7.7E-18 2.6E-22 147.1 14.0 108 68-178 119-226 (286)
47 3ocj_A Putative exported prote 99.8 5.3E-18 1.8E-22 149.7 12.8 115 66-180 115-232 (305)
48 2p35_A Trans-aconitate 2-methy 99.8 6.7E-18 2.3E-22 145.0 13.0 127 39-178 8-135 (259)
49 3fpf_A Mtnas, putative unchara 99.8 1.4E-17 4.8E-22 145.1 15.0 117 52-175 105-222 (298)
50 3mti_A RRNA methylase; SAM-dep 99.8 8.4E-18 2.9E-22 137.3 12.6 110 66-177 19-137 (185)
51 2p8j_A S-adenosylmethionine-de 99.7 1.1E-17 3.9E-22 138.9 13.2 112 68-181 22-134 (209)
52 2avn_A Ubiquinone/menaquinone 99.7 1.2E-17 4.2E-22 144.0 13.4 143 25-177 11-154 (260)
53 3pfg_A N-methyltransferase; N, 99.7 2.9E-18 9.9E-23 147.9 9.5 106 68-180 49-156 (263)
54 2r3s_A Uncharacterized protein 99.7 3.9E-17 1.3E-21 145.7 16.8 122 58-180 152-276 (335)
55 1ve3_A Hypothetical protein PH 99.7 3.9E-17 1.3E-21 137.3 15.9 116 57-177 28-144 (227)
56 3gwz_A MMCR; methyltransferase 99.7 1.5E-16 5.1E-21 144.2 20.5 122 58-181 191-313 (369)
57 4fsd_A Arsenic methyltransfera 99.7 1.2E-17 4.3E-22 152.0 13.2 111 67-179 81-207 (383)
58 3bkw_A MLL3908 protein, S-aden 99.7 3.7E-18 1.3E-22 145.1 9.0 112 59-177 33-146 (243)
59 3mcz_A O-methyltransferase; ad 99.7 2.6E-17 8.9E-22 148.0 15.0 121 60-181 169-293 (352)
60 3dp7_A SAM-dependent methyltra 99.7 4.8E-17 1.6E-21 147.1 16.6 119 62-181 172-293 (363)
61 3gu3_A Methyltransferase; alph 99.7 2.2E-17 7.4E-22 144.3 13.5 117 57-177 9-128 (284)
62 3p9n_A Possible methyltransfer 99.7 7.2E-17 2.5E-21 132.4 15.2 109 68-178 43-156 (189)
63 3hm2_A Precorrin-6Y C5,15-meth 99.7 3.8E-17 1.3E-21 132.2 13.4 114 57-177 13-129 (178)
64 3njr_A Precorrin-6Y methylase; 99.7 9.4E-17 3.2E-21 133.6 16.0 110 59-176 45-155 (204)
65 3ccf_A Cyclopropane-fatty-acyl 99.7 1.8E-17 6.2E-22 144.3 12.1 112 59-179 47-158 (279)
66 3d2l_A SAM-dependent methyltra 99.7 2.3E-17 7.7E-22 140.2 12.4 134 34-176 3-138 (243)
67 3g2m_A PCZA361.24; SAM-depende 99.7 1.1E-17 3.9E-22 147.0 10.9 122 56-179 70-194 (299)
68 3i53_A O-methyltransferase; CO 99.7 1E-16 3.5E-21 143.1 17.2 118 61-180 161-279 (332)
69 3g07_A 7SK snRNA methylphospha 99.7 6.1E-18 2.1E-22 148.5 8.7 107 69-175 46-220 (292)
70 3orh_A Guanidinoacetate N-meth 99.7 1.6E-18 5.5E-23 147.6 4.8 139 30-174 15-169 (236)
71 3e05_A Precorrin-6Y C5,15-meth 99.7 1.5E-16 5.1E-21 132.0 16.5 113 58-176 29-143 (204)
72 3dxy_A TRNA (guanine-N(7)-)-me 99.7 1.2E-17 4.2E-22 140.5 9.9 106 69-175 34-150 (218)
73 1zx0_A Guanidinoacetate N-meth 99.7 1.8E-18 6.2E-23 147.0 4.4 149 25-176 10-171 (236)
74 3u81_A Catechol O-methyltransf 99.7 4.1E-17 1.4E-21 137.3 12.6 139 31-177 25-172 (221)
75 1dus_A MJ0882; hypothetical pr 99.7 1.2E-16 4E-21 130.7 14.9 119 57-177 40-159 (194)
76 1dl5_A Protein-L-isoaspartate 99.7 1.1E-17 3.8E-22 148.6 9.0 150 56-214 62-217 (317)
77 3dr5_A Putative O-methyltransf 99.7 7.7E-17 2.6E-21 135.9 13.5 141 28-176 18-164 (221)
78 3eey_A Putative rRNA methylase 99.7 3.6E-17 1.2E-21 134.9 11.0 114 64-177 17-141 (197)
79 3lbf_A Protein-L-isoaspartate 99.7 2.7E-17 9.4E-22 137.0 10.3 112 56-177 64-176 (210)
80 3bxo_A N,N-dimethyltransferase 99.7 1.7E-17 5.7E-22 140.7 9.0 116 57-180 29-146 (239)
81 3sm3_A SAM-dependent methyltra 99.7 5.3E-17 1.8E-21 137.0 12.1 111 68-179 29-145 (235)
82 2kw5_A SLR1183 protein; struct 99.7 1.9E-16 6.5E-21 130.9 14.7 115 58-180 21-136 (202)
83 1qzz_A RDMB, aclacinomycin-10- 99.7 1.8E-16 6.1E-21 143.6 15.7 116 59-176 172-288 (374)
84 3thr_A Glycine N-methyltransfe 99.7 4.2E-17 1.4E-21 142.7 11.0 116 61-177 49-177 (293)
85 3uwp_A Histone-lysine N-methyl 99.7 5.5E-17 1.9E-21 146.5 11.3 137 42-181 146-294 (438)
86 2a14_A Indolethylamine N-methy 99.7 4.7E-17 1.6E-21 140.7 9.9 112 66-177 52-199 (263)
87 1x19_A CRTF-related protein; m 99.7 5.3E-16 1.8E-20 139.9 17.2 121 58-180 179-300 (359)
88 2esr_A Methyltransferase; stru 99.7 1.1E-16 3.6E-21 129.8 11.4 120 57-179 18-142 (177)
89 2ip2_A Probable phenazine-spec 99.7 2.6E-16 9E-21 140.4 14.9 120 58-180 157-277 (334)
90 2y1w_A Histone-arginine methyl 99.7 1.4E-16 4.9E-21 143.2 13.0 118 57-175 38-155 (348)
91 1tw3_A COMT, carminomycin 4-O- 99.7 3.9E-16 1.3E-20 140.7 15.9 117 59-177 173-290 (360)
92 3bgv_A MRNA CAP guanine-N7 met 99.7 1.7E-16 5.9E-21 140.4 13.2 110 68-177 33-157 (313)
93 2vdw_A Vaccinia virus capping 99.7 4.4E-17 1.5E-21 143.7 9.2 109 69-177 48-171 (302)
94 3ntv_A MW1564 protein; rossman 99.7 4.7E-16 1.6E-20 131.9 15.0 151 14-177 24-178 (232)
95 3i9f_A Putative type 11 methyl 99.7 4.2E-17 1.4E-21 131.3 7.8 109 60-180 8-117 (170)
96 2qe6_A Uncharacterized protein 99.7 6.4E-16 2.2E-20 134.4 15.8 124 52-178 59-199 (274)
97 3fzg_A 16S rRNA methylase; met 99.7 6.3E-17 2.2E-21 131.4 8.5 114 56-175 38-152 (200)
98 3e8s_A Putative SAM dependent 99.7 1.4E-17 4.9E-22 139.6 4.9 138 31-179 13-156 (227)
99 2yxe_A Protein-L-isoaspartate 99.7 7.2E-17 2.5E-21 134.9 8.8 151 16-178 23-180 (215)
100 2aot_A HMT, histamine N-methyl 99.7 1.2E-16 4E-21 140.2 10.5 108 68-178 51-175 (292)
101 1xdz_A Methyltransferase GIDB; 99.7 3.3E-16 1.1E-20 133.4 12.8 100 68-174 69-173 (240)
102 2pxx_A Uncharacterized protein 99.7 2.5E-16 8.6E-21 131.0 11.5 109 68-179 41-163 (215)
103 3cgg_A SAM-dependent methyltra 99.7 6E-16 2.1E-20 126.5 13.4 109 61-177 39-149 (195)
104 3lst_A CALO1 methyltransferase 99.7 4.3E-16 1.5E-20 140.0 13.6 117 59-180 174-291 (348)
105 3grz_A L11 mtase, ribosomal pr 99.7 5.4E-16 1.9E-20 128.6 12.7 104 67-177 58-161 (205)
106 3htx_A HEN1; HEN1, small RNA m 99.7 6.8E-16 2.3E-20 149.1 15.0 120 56-177 708-836 (950)
107 2ift_A Putative methylase HI07 99.7 2E-16 6.8E-21 131.3 9.9 108 69-179 53-167 (201)
108 3duw_A OMT, O-methyltransferas 99.7 8.6E-16 2.9E-20 129.1 13.8 118 52-177 44-169 (223)
109 3ggd_A SAM-dependent methyltra 99.7 1.3E-16 4.5E-21 136.0 8.8 108 67-179 54-167 (245)
110 2fhp_A Methylase, putative; al 99.7 3.5E-16 1.2E-20 127.5 10.8 120 57-179 31-158 (187)
111 3r0q_C Probable protein argini 99.7 7.5E-17 2.6E-21 146.5 7.5 116 59-175 53-169 (376)
112 3evz_A Methyltransferase; NYSG 99.7 1.1E-15 3.8E-20 129.0 13.9 109 65-175 51-179 (230)
113 2fca_A TRNA (guanine-N(7)-)-me 99.7 4.9E-16 1.7E-20 130.2 11.5 107 68-175 37-153 (213)
114 2fyt_A Protein arginine N-meth 99.7 6.9E-16 2.4E-20 138.3 13.2 112 59-173 54-169 (340)
115 1jsx_A Glucose-inhibited divis 99.7 6.9E-16 2.3E-20 128.1 12.3 100 69-175 65-165 (207)
116 2g72_A Phenylethanolamine N-me 99.7 3.3E-16 1.1E-20 137.0 10.6 109 68-176 70-216 (289)
117 3b3j_A Histone-arginine methyl 99.7 7.7E-16 2.6E-20 143.8 13.7 152 58-210 147-304 (480)
118 3tfw_A Putative O-methyltransf 99.7 2.2E-15 7.5E-20 129.1 15.0 118 52-177 49-172 (248)
119 1yzh_A TRNA (guanine-N(7)-)-me 99.7 1.2E-15 4.2E-20 127.5 13.2 107 68-175 40-156 (214)
120 3g89_A Ribosomal RNA small sub 99.6 3.9E-16 1.3E-20 133.9 10.1 101 68-175 79-184 (249)
121 1l3i_A Precorrin-6Y methyltran 99.6 1.3E-15 4.3E-20 124.2 12.7 114 57-176 21-135 (192)
122 1vlm_A SAM-dependent methyltra 99.6 4E-16 1.4E-20 130.9 9.5 94 70-178 48-142 (219)
123 3lpm_A Putative methyltransfer 99.6 8.4E-16 2.9E-20 132.4 11.6 114 61-174 40-175 (259)
124 4e2x_A TCAB9; kijanose, tetron 99.6 7.1E-17 2.4E-21 148.4 5.1 155 49-216 87-243 (416)
125 4dcm_A Ribosomal RNA large sub 99.6 1.2E-15 4E-20 138.4 13.0 118 59-176 212-335 (375)
126 3q7e_A Protein arginine N-meth 99.6 6.2E-16 2.1E-20 139.1 10.4 108 66-174 63-172 (349)
127 4a6d_A Hydroxyindole O-methylt 99.6 6.2E-15 2.1E-19 132.7 16.7 119 59-180 169-288 (353)
128 1sui_A Caffeoyl-COA O-methyltr 99.6 2.4E-15 8.2E-20 128.8 13.0 154 15-177 29-192 (247)
129 2gpy_A O-methyltransferase; st 99.6 3.2E-15 1.1E-19 126.6 13.2 117 53-177 41-162 (233)
130 1u2z_A Histone-lysine N-methyl 99.6 4.1E-15 1.4E-19 136.5 14.8 119 56-177 229-361 (433)
131 3tr6_A O-methyltransferase; ce 99.6 1.5E-15 5.2E-20 127.7 11.0 118 52-177 50-176 (225)
132 3dmg_A Probable ribosomal RNA 99.6 3.2E-15 1.1E-19 135.8 13.8 121 53-176 215-341 (381)
133 2fpo_A Methylase YHHF; structu 99.6 1.2E-15 4E-20 126.8 9.9 105 69-177 54-162 (202)
134 1vbf_A 231AA long hypothetical 99.6 3E-15 1E-19 126.4 12.6 112 56-179 57-169 (231)
135 1nt2_A Fibrillarin-like PRE-rR 99.6 2.7E-15 9.3E-20 125.4 12.2 104 65-175 53-161 (210)
136 2yxd_A Probable cobalt-precorr 99.6 5.6E-15 1.9E-19 119.6 13.7 111 56-176 22-132 (183)
137 2i62_A Nicotinamide N-methyltr 99.6 1E-15 3.6E-20 131.5 9.8 112 66-178 53-201 (265)
138 3gdh_A Trimethylguanosine synt 99.6 5.3E-17 1.8E-21 138.2 1.6 103 69-174 78-180 (241)
139 4df3_A Fibrillarin-like rRNA/T 99.6 1.3E-15 4.4E-20 128.7 9.7 106 63-175 71-182 (233)
140 3mb5_A SAM-dependent methyltra 99.6 2.4E-15 8.2E-20 128.9 11.6 111 58-175 82-194 (255)
141 3reo_A (ISO)eugenol O-methyltr 99.6 7.1E-15 2.4E-19 133.1 15.3 112 59-180 192-305 (368)
142 1g6q_1 HnRNP arginine N-methyl 99.6 2.3E-15 7.8E-20 134.3 11.6 112 61-173 30-143 (328)
143 3cc8_A Putative methyltransfer 99.6 2.6E-15 8.8E-20 126.0 11.3 108 60-179 24-134 (230)
144 2b3t_A Protein methyltransfera 99.6 5.3E-15 1.8E-19 128.6 13.6 118 55-174 96-237 (276)
145 3c3p_A Methyltransferase; NP_9 99.6 3.8E-15 1.3E-19 124.1 11.9 115 53-176 43-161 (210)
146 4azs_A Methyltransferase WBDD; 99.6 2.8E-15 9.7E-20 143.1 12.3 110 69-180 66-178 (569)
147 4dzr_A Protein-(glutamine-N5) 99.6 3.6E-16 1.2E-20 129.9 5.2 117 55-173 15-162 (215)
148 3p9c_A Caffeic acid O-methyltr 99.6 1.2E-14 4.2E-19 131.4 15.7 112 59-180 190-303 (364)
149 2frn_A Hypothetical protein PH 99.6 3.3E-15 1.1E-19 130.2 11.5 104 68-177 124-227 (278)
150 3mq2_A 16S rRNA methyltransfer 99.6 2.6E-16 8.8E-21 131.9 3.9 111 62-176 20-141 (218)
151 2ozv_A Hypothetical protein AT 99.6 2.1E-15 7.3E-20 130.1 9.7 113 62-174 29-169 (260)
152 1o9g_A RRNA methyltransferase; 99.6 2.3E-15 7.8E-20 129.0 9.8 120 56-175 38-214 (250)
153 1ws6_A Methyltransferase; stru 99.6 1.6E-15 5.3E-20 121.7 8.1 105 69-180 41-152 (171)
154 3r3h_A O-methyltransferase, SA 99.6 8E-16 2.7E-20 131.4 6.4 120 51-178 45-173 (242)
155 1af7_A Chemotaxis receptor met 99.6 1.4E-14 4.7E-19 125.7 14.2 105 69-173 105-250 (274)
156 3c3y_A Pfomt, O-methyltransfer 99.6 8.4E-15 2.9E-19 124.6 12.5 117 52-176 56-182 (237)
157 3giw_A Protein of unknown func 99.6 7.1E-15 2.4E-19 126.6 12.1 128 51-179 59-204 (277)
158 3ckk_A TRNA (guanine-N(7)-)-me 99.6 3.9E-15 1.3E-19 126.6 10.4 108 67-175 44-168 (235)
159 2pjd_A Ribosomal RNA small sub 99.6 4E-15 1.4E-19 133.5 11.0 115 59-176 186-304 (343)
160 3p2e_A 16S rRNA methylase; met 99.6 1E-15 3.6E-20 129.3 6.3 107 68-175 23-139 (225)
161 1yb2_A Hypothetical protein TA 99.6 4.7E-15 1.6E-19 128.9 10.4 110 59-176 100-212 (275)
162 1jg1_A PIMT;, protein-L-isoasp 99.6 1.1E-14 3.9E-19 123.4 12.5 115 56-179 78-193 (235)
163 4hc4_A Protein arginine N-meth 99.6 2.7E-15 9.2E-20 135.5 8.7 105 68-173 82-187 (376)
164 1fp1_D Isoliquiritigenin 2'-O- 99.6 9.5E-15 3.2E-19 132.4 12.0 112 59-180 198-311 (372)
165 2yvl_A TRMI protein, hypotheti 99.6 2.5E-14 8.4E-19 121.9 13.9 111 58-176 80-191 (248)
166 2nxc_A L11 mtase, ribosomal pr 99.6 8.6E-15 2.9E-19 125.9 10.9 103 67-177 118-220 (254)
167 1fbn_A MJ fibrillarin homologu 99.6 5.1E-15 1.7E-19 125.3 9.3 105 62-174 67-177 (230)
168 2hnk_A SAM-dependent O-methylt 99.6 1.1E-14 3.8E-19 123.8 11.4 117 52-176 46-182 (239)
169 2igt_A SAM dependent methyltra 99.6 1.3E-14 4.4E-19 129.5 12.3 107 68-177 152-274 (332)
170 1i1n_A Protein-L-isoaspartate 99.6 2.3E-14 8E-19 120.5 13.3 112 59-178 65-185 (226)
171 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.4E-14 4.8E-19 124.1 11.8 109 59-175 86-198 (258)
172 2ipx_A RRNA 2'-O-methyltransfe 99.6 1.6E-14 5.4E-19 122.3 11.5 108 62-176 70-183 (233)
173 1i9g_A Hypothetical protein RV 99.6 1.6E-14 5.5E-19 125.4 11.6 113 57-176 87-204 (280)
174 3tma_A Methyltransferase; thum 99.6 4.8E-14 1.7E-18 126.9 15.1 118 58-176 192-318 (354)
175 3bzb_A Uncharacterized protein 99.6 3.8E-14 1.3E-18 123.6 13.8 117 56-174 66-204 (281)
176 3lec_A NADB-rossmann superfami 99.6 3.2E-14 1.1E-18 119.8 12.8 115 57-177 11-127 (230)
177 3kr9_A SAM-dependent methyltra 99.6 3.4E-14 1.2E-18 119.4 12.7 113 58-176 6-120 (225)
178 1nv8_A HEMK protein; class I a 99.6 3E-14 1E-18 124.5 12.5 118 57-175 111-249 (284)
179 2h00_A Methyltransferase 10 do 99.6 8.3E-15 2.8E-19 125.6 8.7 119 56-174 50-191 (254)
180 1ixk_A Methyltransferase; open 99.6 2.4E-14 8.3E-19 126.9 11.9 117 61-178 110-249 (315)
181 3gnl_A Uncharacterized protein 99.5 3.9E-14 1.3E-18 120.2 12.4 114 58-177 12-127 (244)
182 3ajd_A Putative methyltransfer 99.5 1.4E-14 4.9E-19 125.9 9.7 116 62-178 76-214 (274)
183 1o54_A SAM-dependent O-methylt 99.5 2.5E-14 8.5E-19 124.3 11.2 110 59-175 102-213 (277)
184 1g8a_A Fibrillarin-like PRE-rR 99.5 2.9E-14 1E-18 120.1 11.1 106 62-174 66-177 (227)
185 2pbf_A Protein-L-isoaspartate 99.5 3.1E-14 1.1E-18 119.8 11.0 112 59-178 68-196 (227)
186 3a27_A TYW2, uncharacterized p 99.5 2.6E-14 9E-19 124.1 10.6 106 66-178 116-222 (272)
187 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.7E-14 1.3E-18 121.2 11.1 107 68-175 48-173 (246)
188 3id6_C Fibrillarin-like rRNA/T 99.5 5.6E-14 1.9E-18 118.8 12.0 104 65-175 72-181 (232)
189 3cbg_A O-methyltransferase; cy 99.5 2.8E-14 9.6E-19 120.9 10.2 118 52-177 58-184 (232)
190 1r18_A Protein-L-isoaspartate( 99.5 2.7E-14 9.1E-19 120.4 9.9 111 58-177 71-196 (227)
191 2avd_A Catechol-O-methyltransf 99.5 3.2E-14 1.1E-18 119.9 10.3 117 53-177 56-181 (229)
192 3q87_B N6 adenine specific DNA 99.5 1.9E-14 6.5E-19 116.1 8.2 96 68-176 22-124 (170)
193 3m33_A Uncharacterized protein 99.5 6E-15 2.1E-19 124.4 5.4 90 68-172 47-139 (226)
194 3adn_A Spermidine synthase; am 99.5 6.7E-14 2.3E-18 122.7 12.1 109 68-176 82-199 (294)
195 1p91_A Ribosomal RNA large sub 99.5 4.5E-14 1.5E-18 121.9 10.6 97 68-179 84-182 (269)
196 3gjy_A Spermidine synthase; AP 99.5 2.3E-14 7.9E-19 126.2 8.0 125 52-177 68-202 (317)
197 3bwc_A Spermidine synthase; SA 99.5 6.6E-14 2.3E-18 123.5 10.8 109 67-175 93-210 (304)
198 3k6r_A Putative transferase PH 99.5 6.8E-14 2.3E-18 121.4 10.4 110 60-177 118-227 (278)
199 3sso_A Methyltransferase; macr 99.5 9.1E-15 3.1E-19 131.8 4.8 135 29-178 178-327 (419)
200 1fp2_A Isoflavone O-methyltran 99.5 6E-14 2E-18 126.2 10.2 105 66-180 185-293 (352)
201 2b25_A Hypothetical protein; s 99.5 1.4E-13 4.9E-18 122.9 12.1 112 58-176 94-220 (336)
202 2bm8_A Cephalosporin hydroxyla 99.5 2.2E-14 7.4E-19 122.0 6.3 108 55-176 70-188 (236)
203 2plw_A Ribosomal RNA methyltra 99.5 1.2E-13 4E-18 114.0 10.3 109 57-177 9-156 (201)
204 1zq9_A Probable dimethyladenos 99.5 1E-13 3.6E-18 121.1 10.3 114 56-172 15-144 (285)
205 1ej0_A FTSJ; methyltransferase 99.5 6.2E-14 2.1E-18 112.5 8.1 110 57-178 9-139 (180)
206 1ne2_A Hypothetical protein TA 99.5 8.6E-14 3E-18 114.9 9.2 98 60-165 42-139 (200)
207 1wy7_A Hypothetical protein PH 99.5 5.9E-13 2E-17 110.3 14.2 107 60-172 40-146 (207)
208 2o07_A Spermidine synthase; st 99.5 1E-13 3.5E-18 122.2 9.5 111 66-176 92-210 (304)
209 2b78_A Hypothetical protein SM 99.5 1.4E-13 4.7E-18 125.3 10.3 110 68-177 211-333 (385)
210 1zg3_A Isoflavanone 4'-O-methy 99.5 1.5E-13 5.1E-18 123.8 10.0 111 60-180 182-298 (358)
211 1xj5_A Spermidine synthase 1; 99.5 1.6E-13 5.5E-18 122.4 9.5 109 66-174 117-234 (334)
212 2i7c_A Spermidine synthase; tr 99.5 1.9E-13 6.6E-18 119.3 9.4 110 66-175 75-192 (283)
213 1uir_A Polyamine aminopropyltr 99.4 1.9E-13 6.5E-18 121.1 9.4 110 68-177 76-197 (314)
214 2zfu_A Nucleomethylin, cerebra 99.4 8.7E-14 3E-18 116.0 6.7 88 67-177 65-153 (215)
215 2b2c_A Spermidine synthase; be 99.4 1.1E-13 3.7E-18 122.5 7.5 107 68-175 107-222 (314)
216 2as0_A Hypothetical protein PH 99.4 2E-13 6.9E-18 124.7 9.3 110 68-177 216-337 (396)
217 3hp7_A Hemolysin, putative; st 99.4 9.7E-14 3.3E-18 120.9 6.8 108 56-174 71-184 (291)
218 2qm3_A Predicted methyltransfe 99.4 1.1E-12 3.7E-17 118.9 13.9 104 67-175 170-278 (373)
219 2yxl_A PH0851 protein, 450AA l 99.4 1.1E-12 3.6E-17 121.8 14.1 118 61-179 251-393 (450)
220 3v97_A Ribosomal RNA large sub 99.4 4.7E-13 1.6E-17 130.4 12.0 107 69-177 539-659 (703)
221 3c0k_A UPF0064 protein YCCW; P 99.4 4E-13 1.4E-17 122.7 10.9 110 68-177 219-341 (396)
222 2pt6_A Spermidine synthase; tr 99.4 1.8E-13 6.1E-18 121.6 8.2 107 68-175 115-230 (321)
223 3lcv_B Sisomicin-gentamicin re 99.4 3E-13 1E-17 114.7 9.0 104 68-174 131-235 (281)
224 1mjf_A Spermidine synthase; sp 99.4 1.6E-13 5.4E-18 119.7 7.3 107 68-175 74-193 (281)
225 3m6w_A RRNA methylase; rRNA me 99.4 4.1E-13 1.4E-17 124.3 10.3 117 61-179 93-233 (464)
226 1inl_A Spermidine synthase; be 99.4 3.6E-13 1.2E-17 118.3 9.4 108 68-175 89-205 (296)
227 1iy9_A Spermidine synthase; ro 99.4 3.6E-13 1.2E-17 117.1 9.3 107 69-175 75-189 (275)
228 4dmg_A Putative uncharacterize 99.4 5.3E-13 1.8E-17 121.5 10.5 107 68-177 213-328 (393)
229 3m4x_A NOL1/NOP2/SUN family pr 99.4 5.5E-13 1.9E-17 123.3 10.5 118 61-179 97-238 (456)
230 3tm4_A TRNA (guanine N2-)-meth 99.4 7.5E-13 2.6E-17 120.0 11.1 112 60-173 209-328 (373)
231 2frx_A Hypothetical protein YE 99.4 6.5E-13 2.2E-17 123.8 10.9 116 63-179 109-250 (479)
232 3dou_A Ribosomal RNA large sub 99.4 4.5E-13 1.5E-17 110.2 8.7 111 56-179 11-143 (191)
233 3frh_A 16S rRNA methylase; met 99.4 1.4E-12 4.9E-17 109.6 11.7 102 68-174 104-205 (253)
234 1wxx_A TT1595, hypothetical pr 99.4 4.1E-13 1.4E-17 122.1 9.0 107 69-177 209-327 (382)
235 2f8l_A Hypothetical protein LM 99.4 1.2E-12 4.1E-17 117.3 11.5 119 56-176 116-257 (344)
236 2wa2_A Non-structural protein 99.4 5.9E-14 2E-18 122.0 2.8 117 56-177 69-195 (276)
237 2ld4_A Anamorsin; methyltransf 99.4 1.7E-13 5.9E-18 110.8 5.2 157 64-263 7-170 (176)
238 2yx1_A Hypothetical protein MJ 99.4 9.9E-13 3.4E-17 117.5 10.3 107 60-178 188-294 (336)
239 2oxt_A Nucleoside-2'-O-methylt 99.4 7.2E-14 2.5E-18 120.8 2.7 117 56-177 61-187 (265)
240 2h1r_A Dimethyladenosine trans 99.4 2.5E-12 8.6E-17 113.0 12.4 110 56-169 29-153 (299)
241 1sqg_A SUN protein, FMU protei 99.4 2.2E-12 7.5E-17 119.0 12.1 118 60-179 237-378 (429)
242 1uwv_A 23S rRNA (uracil-5-)-me 99.4 8.5E-12 2.9E-16 115.2 14.7 115 53-175 270-389 (433)
243 3k0b_A Predicted N6-adenine-sp 99.3 1E-11 3.5E-16 113.1 14.2 120 57-176 189-351 (393)
244 3ldg_A Putative uncharacterize 99.3 1.9E-11 6.6E-16 110.8 15.5 120 57-176 182-344 (384)
245 3opn_A Putative hemolysin; str 99.3 3.2E-13 1.1E-17 114.5 3.4 108 57-175 24-137 (232)
246 2nyu_A Putative ribosomal RNA 99.3 3E-12 1E-16 104.9 9.2 108 58-177 10-147 (196)
247 2jjq_A Uncharacterized RNA met 99.3 1.7E-11 6E-16 112.6 15.2 106 58-175 282-387 (425)
248 3ldu_A Putative methylase; str 99.3 7.7E-12 2.6E-16 113.7 12.5 120 57-176 183-345 (385)
249 2cmg_A Spermidine synthase; tr 99.3 1.3E-12 4.3E-17 112.8 6.9 98 68-175 71-171 (262)
250 3gru_A Dimethyladenosine trans 99.3 2.4E-11 8.2E-16 106.3 13.9 89 56-148 37-126 (295)
251 2p41_A Type II methyltransfera 99.3 1.2E-12 4.2E-17 115.2 5.2 116 57-178 70-194 (305)
252 1qam_A ERMC' methyltransferase 99.3 1.2E-11 4E-16 105.6 10.4 86 56-146 17-104 (244)
253 2okc_A Type I restriction enzy 99.3 7.7E-12 2.6E-16 115.9 9.0 119 57-175 159-307 (445)
254 2b9e_A NOL1/NOP2/SUN domain fa 99.3 7.3E-11 2.5E-15 104.0 13.7 117 61-179 94-238 (309)
255 2xyq_A Putative 2'-O-methyl tr 99.2 1.4E-11 4.9E-16 107.4 8.4 126 34-178 29-174 (290)
256 3bt7_A TRNA (uracil-5-)-methyl 99.2 1.5E-11 5.2E-16 111.2 8.7 112 54-176 199-327 (369)
257 2ih2_A Modification methylase 99.2 1.6E-11 5.4E-16 112.7 8.5 111 57-177 27-166 (421)
258 3tqs_A Ribosomal RNA small sub 99.2 2E-10 7E-15 98.4 11.8 87 56-147 16-107 (255)
259 1yub_A Ermam, rRNA methyltrans 99.2 7.3E-13 2.5E-17 113.1 -3.7 112 57-174 17-144 (245)
260 2dul_A N(2),N(2)-dimethylguano 99.2 7.9E-11 2.7E-15 106.6 9.4 100 69-175 47-164 (378)
261 3axs_A Probable N(2),N(2)-dime 99.2 4.1E-11 1.4E-15 108.7 7.2 102 68-175 51-158 (392)
262 2qfm_A Spermine synthase; sper 99.1 5E-11 1.7E-15 106.3 7.1 110 68-177 187-316 (364)
263 3fut_A Dimethyladenosine trans 99.1 1.6E-10 5.4E-15 99.9 9.9 98 56-160 34-133 (271)
264 2r6z_A UPF0341 protein in RSP 99.1 3.6E-11 1.2E-15 103.4 5.1 87 61-148 75-173 (258)
265 1m6y_A S-adenosyl-methyltransf 99.1 1.2E-10 4.2E-15 102.1 7.4 87 58-146 15-108 (301)
266 4gqb_A Protein arginine N-meth 99.1 8.2E-10 2.8E-14 105.4 13.3 102 70-172 358-464 (637)
267 3cvo_A Methyltransferase-like 99.1 1.2E-09 4E-14 90.0 12.0 112 50-175 16-154 (202)
268 3ftd_A Dimethyladenosine trans 99.0 1.4E-09 4.9E-14 92.9 10.7 72 56-132 18-89 (249)
269 3v97_A Ribosomal RNA large sub 99.0 2.5E-09 8.5E-14 104.2 13.4 120 57-176 178-348 (703)
270 3uzu_A Ribosomal RNA small sub 99.0 2E-09 6.9E-14 93.4 11.4 86 56-147 29-125 (279)
271 2oyr_A UPF0341 protein YHIQ; a 99.0 2.5E-10 8.4E-15 97.9 4.0 107 59-169 76-194 (258)
272 2ar0_A M.ecoki, type I restric 99.0 1.4E-09 4.9E-14 102.8 9.2 117 59-175 159-312 (541)
273 3o4f_A Spermidine synthase; am 98.9 5.6E-09 1.9E-13 90.7 11.7 124 53-177 68-200 (294)
274 3ll7_A Putative methyltransfer 98.9 1.6E-09 5.4E-14 98.6 7.1 75 69-145 93-172 (410)
275 3khk_A Type I restriction-modi 98.9 2.3E-09 7.7E-14 101.4 8.0 117 58-175 234-395 (544)
276 1qyr_A KSGA, high level kasuga 98.9 1.2E-09 4.2E-14 93.4 4.5 85 56-146 8-100 (252)
277 3ua3_A Protein arginine N-meth 98.8 7.7E-09 2.6E-13 98.8 9.7 102 70-172 410-531 (745)
278 3evf_A RNA-directed RNA polyme 98.8 1.1E-08 3.9E-13 87.2 9.3 120 55-177 60-186 (277)
279 3lkd_A Type I restriction-modi 98.8 3.1E-08 1.1E-12 93.5 11.2 109 67-175 219-358 (542)
280 3b5i_A S-adenosyl-L-methionine 98.8 1.7E-07 6E-12 84.2 15.4 127 55-181 33-231 (374)
281 4fzv_A Putative methyltransfer 98.7 4.2E-08 1.4E-12 87.9 10.0 120 61-180 140-289 (359)
282 2wk1_A NOVP; transferase, O-me 98.7 5.2E-08 1.8E-12 84.3 10.0 123 50-176 86-245 (282)
283 3gcz_A Polyprotein; flavivirus 98.7 9.6E-09 3.3E-13 87.8 3.8 118 56-177 77-203 (282)
284 1wg8_A Predicted S-adenosylmet 98.6 1.3E-07 4.4E-12 81.2 7.7 85 57-147 10-100 (285)
285 3s1s_A Restriction endonucleas 98.5 2.4E-07 8.3E-12 89.9 9.6 107 68-175 320-465 (878)
286 3c6k_A Spermine synthase; sper 98.5 1.2E-07 4.2E-12 84.8 6.7 108 68-175 204-331 (381)
287 2efj_A 3,7-dimethylxanthine me 98.5 1.5E-06 5.2E-11 78.3 13.8 146 70-219 53-284 (384)
288 2qy6_A UPF0209 protein YFCK; s 98.4 1.8E-07 6.2E-12 80.0 4.4 106 68-173 59-211 (257)
289 4auk_A Ribosomal RNA large sub 98.4 1.3E-06 4.3E-11 78.0 9.2 94 67-172 209-303 (375)
290 3p8z_A Mtase, non-structural p 98.4 5.2E-06 1.8E-10 68.9 11.9 123 54-180 63-191 (267)
291 3eld_A Methyltransferase; flav 98.4 5.1E-07 1.7E-11 77.7 6.1 118 56-177 68-193 (300)
292 2k4m_A TR8_protein, UPF0146 pr 98.3 6.6E-07 2.3E-11 69.0 5.5 87 69-178 35-124 (153)
293 1m6e_X S-adenosyl-L-methionnin 98.3 7.4E-07 2.5E-11 79.6 6.7 113 69-181 51-215 (359)
294 3lkz_A Non-structural protein 98.3 4.1E-06 1.4E-10 71.8 10.4 121 54-178 79-207 (321)
295 3ufb_A Type I restriction-modi 98.3 6.9E-06 2.4E-10 77.4 13.1 118 57-175 205-362 (530)
296 2px2_A Genome polyprotein [con 98.2 1.2E-06 4.2E-11 73.7 5.4 115 55-177 59-185 (269)
297 2zig_A TTHA0409, putative modi 98.1 1.2E-05 4.2E-10 70.1 9.7 58 56-115 223-280 (297)
298 3tka_A Ribosomal RNA small sub 97.9 1E-05 3.5E-10 71.0 5.0 86 57-147 45-139 (347)
299 1i4w_A Mitochondrial replicati 97.7 0.0001 3.5E-09 65.7 8.1 72 56-131 39-117 (353)
300 1g60_A Adenine-specific methyl 97.6 0.00015 5.1E-09 61.9 8.1 59 56-116 200-258 (260)
301 2uyo_A Hypothetical protein ML 97.6 0.0011 3.6E-08 58.1 12.8 120 57-178 90-221 (310)
302 3r24_A NSP16, 2'-O-methyl tran 97.5 0.0004 1.4E-08 59.5 9.2 112 54-180 89-222 (344)
303 1rjd_A PPM1P, carboxy methyl t 97.4 0.0016 5.3E-08 57.6 11.6 110 68-179 96-236 (334)
304 2oo3_A Protein involved in cat 97.3 8.1E-05 2.8E-09 63.9 1.9 103 70-178 92-201 (283)
305 1f8f_A Benzyl alcohol dehydrog 97.3 0.001 3.5E-08 59.5 9.2 101 60-175 181-289 (371)
306 2vz8_A Fatty acid synthase; tr 97.0 0.0003 1E-08 77.3 3.6 102 68-175 1239-1348(2512)
307 1pl8_A Human sorbitol dehydrog 97.0 0.0022 7.4E-08 57.0 8.8 99 62-175 164-273 (356)
308 3two_A Mannitol dehydrogenase; 97.0 0.00097 3.3E-08 59.1 6.1 97 61-175 168-265 (348)
309 3tos_A CALS11; methyltransfera 97.0 0.0064 2.2E-07 51.5 10.7 115 59-178 60-220 (257)
310 3s2e_A Zinc-containing alcohol 96.9 0.0019 6.5E-08 57.0 7.5 99 61-174 158-262 (340)
311 3fpc_A NADP-dependent alcohol 96.9 0.002 6.9E-08 57.1 7.7 101 61-176 158-267 (352)
312 4ej6_A Putative zinc-binding d 96.9 0.0043 1.5E-07 55.5 9.8 99 62-175 175-284 (370)
313 2dph_A Formaldehyde dismutase; 96.9 0.0037 1.3E-07 56.4 9.1 105 62-174 178-298 (398)
314 3m6i_A L-arabinitol 4-dehydrog 96.8 0.0033 1.1E-07 56.0 8.1 102 61-175 171-283 (363)
315 1e3j_A NADP(H)-dependent ketos 96.8 0.0092 3.1E-07 52.8 10.9 99 62-175 161-271 (352)
316 1kol_A Formaldehyde dehydrogen 96.8 0.0064 2.2E-07 54.8 9.9 104 62-175 178-300 (398)
317 3goh_A Alcohol dehydrogenase, 96.7 0.0039 1.3E-07 54.3 7.5 92 63-174 136-228 (315)
318 1pqw_A Polyketide synthase; ro 96.7 0.0083 2.8E-07 48.3 9.0 94 63-174 32-136 (198)
319 3uog_A Alcohol dehydrogenase; 96.7 0.0037 1.3E-07 55.7 7.4 98 63-176 183-288 (363)
320 3uko_A Alcohol dehydrogenase c 96.7 0.0045 1.6E-07 55.4 7.9 100 61-175 185-295 (378)
321 1p0f_A NADP-dependent alcohol 96.6 0.0074 2.5E-07 53.9 8.8 101 60-175 182-293 (373)
322 1uuf_A YAHK, zinc-type alcohol 96.6 0.0023 8E-08 57.2 5.4 99 61-174 186-287 (369)
323 3ip1_A Alcohol dehydrogenase, 96.5 0.025 8.4E-07 51.1 12.0 100 66-175 210-318 (404)
324 2fzw_A Alcohol dehydrogenase c 96.5 0.01 3.4E-07 53.0 9.3 100 61-175 182-292 (373)
325 3g7u_A Cytosine-specific methy 96.5 0.012 4.2E-07 52.7 9.8 72 71-149 3-84 (376)
326 2py6_A Methyltransferase FKBM; 96.5 0.0088 3E-07 54.3 8.9 65 67-131 224-294 (409)
327 1cdo_A Alcohol dehydrogenase; 96.5 0.0087 3E-07 53.4 8.6 100 61-175 184-294 (374)
328 1e3i_A Alcohol dehydrogenase, 96.5 0.0089 3E-07 53.4 8.5 100 61-175 187-297 (376)
329 4eez_A Alcohol dehydrogenase 1 96.4 0.02 6.7E-07 50.4 10.6 104 60-175 154-263 (348)
330 3gms_A Putative NADPH:quinone 96.4 0.0066 2.2E-07 53.5 7.4 102 58-175 133-243 (340)
331 1vj0_A Alcohol dehydrogenase, 96.4 0.0049 1.7E-07 55.3 6.6 99 62-175 187-298 (380)
332 4b7c_A Probable oxidoreductase 96.4 0.015 5.2E-07 51.0 9.7 104 56-174 136-247 (336)
333 2jhf_A Alcohol dehydrogenase E 96.4 0.012 4E-07 52.6 8.8 100 61-175 183-293 (374)
334 2h6e_A ADH-4, D-arabinose 1-de 96.4 0.0059 2E-07 53.9 6.7 93 66-174 168-268 (344)
335 3fbg_A Putative arginate lyase 96.3 0.022 7.7E-07 50.2 10.3 98 60-173 135-246 (346)
336 4dvj_A Putative zinc-dependent 96.3 0.019 6.3E-07 51.1 9.8 97 62-174 159-269 (363)
337 1g55_A DNA cytosine methyltran 96.3 0.0082 2.8E-07 53.2 7.2 72 71-149 3-81 (343)
338 3jyn_A Quinone oxidoreductase; 96.3 0.026 8.7E-07 49.3 10.3 99 61-175 132-239 (325)
339 1piw_A Hypothetical zinc-type 96.3 0.0028 9.7E-08 56.4 4.1 101 61-174 171-275 (360)
340 1v3u_A Leukotriene B4 12- hydr 96.3 0.022 7.4E-07 49.9 9.7 98 59-174 135-243 (333)
341 1jvb_A NAD(H)-dependent alcoho 96.2 0.015 5.2E-07 51.3 8.5 98 62-174 163-270 (347)
342 2d8a_A PH0655, probable L-thre 96.1 0.012 4.1E-07 52.0 7.4 97 63-175 162-267 (348)
343 1rjw_A ADH-HT, alcohol dehydro 96.1 0.012 4.1E-07 51.8 7.4 97 61-174 156-260 (339)
344 3tqh_A Quinone oxidoreductase; 96.1 0.033 1.1E-06 48.5 10.0 97 61-174 144-244 (321)
345 3jv7_A ADH-A; dehydrogenase, n 96.1 0.014 4.8E-07 51.4 7.6 94 66-175 168-270 (345)
346 4a2c_A Galactitol-1-phosphate 96.0 0.036 1.2E-06 48.7 10.1 103 59-176 150-261 (346)
347 2c7p_A Modification methylase 96.0 0.02 6.7E-07 50.4 8.2 72 70-149 11-84 (327)
348 4dup_A Quinone oxidoreductase; 96.0 0.028 9.5E-07 49.7 9.3 99 61-175 159-265 (353)
349 3qwb_A Probable quinone oxidor 96.0 0.024 8E-07 49.7 8.6 97 63-175 142-247 (334)
350 2hcy_A Alcohol dehydrogenase 1 96.0 0.014 4.9E-07 51.5 7.2 98 61-175 161-269 (347)
351 2c0c_A Zinc binding alcohol de 95.9 0.032 1.1E-06 49.5 9.4 100 60-175 154-261 (362)
352 1yb5_A Quinone oxidoreductase; 95.9 0.045 1.5E-06 48.4 10.1 97 63-175 164-269 (351)
353 2j3h_A NADP-dependent oxidored 95.8 0.032 1.1E-06 49.0 8.8 99 59-174 145-254 (345)
354 1qor_A Quinone oxidoreductase; 95.8 0.034 1.2E-06 48.5 8.8 94 64-175 135-239 (327)
355 4eye_A Probable oxidoreductase 95.8 0.02 6.9E-07 50.4 7.4 98 61-175 151-257 (342)
356 1boo_A Protein (N-4 cytosine-s 95.7 0.015 5.1E-07 51.0 6.1 59 57-117 241-299 (323)
357 3fwz_A Inner membrane protein 95.7 0.061 2.1E-06 40.7 8.7 90 71-173 8-103 (140)
358 1eg2_A Modification methylase 95.7 0.019 6.6E-07 50.2 6.5 59 56-116 230-291 (319)
359 2eih_A Alcohol dehydrogenase; 95.6 0.03 1E-06 49.3 7.7 92 65-174 162-264 (343)
360 3iei_A Leucine carboxyl methyl 95.6 0.15 5E-06 44.9 12.0 109 69-179 90-233 (334)
361 3vyw_A MNMC2; tRNA wobble urid 95.5 0.018 6.2E-07 50.0 5.8 135 38-172 63-223 (308)
362 2dq4_A L-threonine 3-dehydroge 95.5 0.0015 5.2E-08 57.7 -1.4 95 64-175 160-262 (343)
363 2b5w_A Glucose dehydrogenase; 95.4 0.016 5.3E-07 51.5 5.2 95 63-175 160-273 (357)
364 2j8z_A Quinone oxidoreductase; 95.4 0.078 2.7E-06 46.8 9.7 97 63-175 156-261 (354)
365 1wly_A CAAR, 2-haloacrylate re 95.4 0.069 2.4E-06 46.6 9.3 95 63-175 139-244 (333)
366 3nx4_A Putative oxidoreductase 95.4 0.06 2.1E-06 46.8 8.8 97 63-175 139-241 (324)
367 3krt_A Crotonyl COA reductase; 95.4 0.084 2.9E-06 48.4 10.1 94 65-174 224-343 (456)
368 3gaz_A Alcohol dehydrogenase s 95.2 0.085 2.9E-06 46.4 9.3 94 62-174 143-245 (343)
369 2zb4_A Prostaglandin reductase 95.0 0.11 3.7E-06 45.8 9.4 100 58-174 147-259 (357)
370 2vn8_A Reticulon-4-interacting 94.9 0.1 3.5E-06 46.4 8.8 92 67-173 181-278 (375)
371 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.013 4.4E-07 52.0 2.8 100 61-174 171-274 (357)
372 2cdc_A Glucose dehydrogenase g 94.8 0.05 1.7E-06 48.3 6.7 93 64-175 166-278 (366)
373 1zkd_A DUF185; NESG, RPR58, st 94.7 0.29 1E-05 43.8 11.4 53 61-113 72-132 (387)
374 2qrv_A DNA (cytosine-5)-methyl 94.7 0.14 4.8E-06 44.2 9.0 75 68-149 14-96 (295)
375 1yqd_A Sinapyl alcohol dehydro 94.5 0.02 7E-07 50.9 3.4 101 61-175 178-282 (366)
376 1tt7_A YHFP; alcohol dehydroge 94.5 0.04 1.4E-06 48.1 5.2 97 63-175 143-247 (330)
377 3c85_A Putative glutathione-re 94.4 0.28 9.6E-06 38.6 9.6 92 70-174 39-138 (183)
378 1iz0_A Quinone oxidoreductase; 94.4 0.05 1.7E-06 46.9 5.4 91 67-174 123-217 (302)
379 3qv2_A 5-cytosine DNA methyltr 94.3 0.11 3.7E-06 45.6 7.3 72 70-149 10-89 (327)
380 1xa0_A Putative NADPH dependen 94.2 0.055 1.9E-06 47.2 5.2 96 63-174 142-245 (328)
381 4a0s_A Octenoyl-COA reductase/ 94.1 0.27 9.2E-06 44.8 9.9 98 65-175 216-336 (447)
382 3gqv_A Enoyl reductase; medium 94.0 0.36 1.2E-05 42.8 10.5 91 68-174 163-262 (371)
383 4h0n_A DNMT2; SAH binding, tra 94.0 0.079 2.7E-06 46.6 5.9 72 71-149 4-82 (333)
384 3llv_A Exopolyphosphatase-rela 93.8 0.41 1.4E-05 35.8 9.0 67 70-145 6-79 (141)
385 4dcm_A Ribosomal RNA large sub 93.8 0.58 2E-05 41.7 11.3 98 69-175 38-136 (375)
386 2zig_A TTHA0409, putative modi 93.7 0.037 1.3E-06 47.8 3.2 57 119-175 20-97 (297)
387 1zsy_A Mitochondrial 2-enoyl t 93.6 0.65 2.2E-05 40.8 11.3 96 63-174 161-269 (357)
388 3ubt_Y Modification methylase 93.4 0.22 7.5E-06 43.3 7.7 71 71-149 1-74 (331)
389 3l9w_A Glutathione-regulated p 93.2 0.29 9.9E-06 44.3 8.4 93 70-175 4-102 (413)
390 1lss_A TRK system potassium up 93.2 1.5 5.1E-05 32.2 11.2 90 70-173 4-100 (140)
391 1pjc_A Protein (L-alanine dehy 92.8 0.071 2.4E-06 47.4 3.7 99 69-174 166-266 (361)
392 2eez_A Alanine dehydrogenase; 92.7 0.079 2.7E-06 47.2 3.8 99 69-174 165-265 (369)
393 3pi7_A NADH oxidoreductase; gr 92.7 0.18 6.2E-06 44.3 6.1 98 61-175 156-263 (349)
394 2vhw_A Alanine dehydrogenase; 92.7 0.046 1.6E-06 48.9 2.2 99 69-174 167-267 (377)
395 3ggo_A Prephenate dehydrogenas 92.6 0.82 2.8E-05 39.6 10.2 88 70-172 33-125 (314)
396 1gu7_A Enoyl-[acyl-carrier-pro 92.4 0.11 3.6E-06 46.0 4.2 98 65-174 162-274 (364)
397 1id1_A Putative potassium chan 92.3 1.1 3.7E-05 34.0 9.5 92 70-173 3-103 (153)
398 3ius_A Uncharacterized conserv 92.0 1.9 6.6E-05 36.0 11.6 67 71-148 6-75 (286)
399 3pxx_A Carveol dehydrogenase; 92.0 1.5 5.3E-05 36.7 11.0 103 69-174 9-152 (287)
400 3ce6_A Adenosylhomocysteinase; 91.9 0.54 1.9E-05 43.5 8.5 89 67-174 271-360 (494)
401 3oig_A Enoyl-[acyl-carrier-pro 91.7 1.3 4.4E-05 36.8 10.2 106 69-176 6-148 (266)
402 4f3n_A Uncharacterized ACR, CO 91.6 0.9 3.1E-05 41.2 9.4 45 70-114 138-188 (432)
403 3iht_A S-adenosyl-L-methionine 91.5 0.46 1.6E-05 36.7 6.2 112 53-173 25-145 (174)
404 2g1u_A Hypothetical protein TM 91.4 0.29 1E-05 37.4 5.4 94 68-173 17-116 (155)
405 3l4b_C TRKA K+ channel protien 91.4 1.6 5.4E-05 35.3 10.0 88 72-173 2-97 (218)
406 1boo_A Protein (N-4 cytosine-s 91.4 0.13 4.3E-06 45.0 3.5 58 119-176 13-85 (323)
407 3ps9_A TRNA 5-methylaminomethy 91.1 0.18 6.2E-06 48.6 4.6 105 69-173 66-217 (676)
408 4a27_A Synaptic vesicle membra 91.0 0.36 1.2E-05 42.3 6.1 96 61-175 134-238 (349)
409 3grk_A Enoyl-(acyl-carrier-pro 91.0 3.7 0.00013 34.8 12.4 105 68-176 29-170 (293)
410 3p2y_A Alanine dehydrogenase/p 90.8 0.074 2.5E-06 47.6 1.5 42 69-110 183-225 (381)
411 1h2b_A Alcohol dehydrogenase; 90.6 0.62 2.1E-05 41.0 7.3 96 65-175 182-285 (359)
412 4dio_A NAD(P) transhydrogenase 90.5 0.093 3.2E-06 47.3 1.8 42 69-110 189-231 (405)
413 2f1k_A Prephenate dehydrogenas 90.5 2.4 8.2E-05 35.5 10.7 85 72-172 2-88 (279)
414 3pvc_A TRNA 5-methylaminomethy 89.8 0.18 6E-06 48.8 3.3 105 69-173 58-209 (689)
415 1l7d_A Nicotinamide nucleotide 89.8 0.15 5.1E-06 45.7 2.5 42 69-110 171-213 (384)
416 2g5c_A Prephenate dehydrogenas 89.4 2.8 9.4E-05 35.2 10.2 87 72-173 3-94 (281)
417 3ijr_A Oxidoreductase, short c 89.2 4.6 0.00016 34.1 11.5 103 69-174 46-181 (291)
418 2ew2_A 2-dehydropantoate 2-red 89.1 8.5 0.00029 32.4 13.3 89 71-173 4-106 (316)
419 1zcj_A Peroxisomal bifunctiona 89.0 6.5 0.00022 35.8 13.1 95 71-173 38-148 (463)
420 4eso_A Putative oxidoreductase 88.9 2.2 7.6E-05 35.3 9.2 101 69-175 7-138 (255)
421 3ado_A Lambda-crystallin; L-gu 88.7 1.6 5.6E-05 37.9 8.3 102 70-178 6-126 (319)
422 3d4o_A Dipicolinate synthase s 88.7 1.4 4.8E-05 37.6 7.9 88 68-173 153-242 (293)
423 4g81_D Putative hexonate dehyd 88.6 3.3 0.00011 34.7 9.9 75 69-146 8-96 (255)
424 3ic5_A Putative saccharopine d 88.6 3.7 0.00013 28.9 9.2 68 69-145 4-78 (118)
425 3me5_A Cytosine-specific methy 88.6 0.31 1.1E-05 45.0 3.8 76 70-149 88-182 (482)
426 2rir_A Dipicolinate synthase, 88.3 1.8 6.1E-05 37.0 8.3 88 68-173 155-244 (300)
427 3ek2_A Enoyl-(acyl-carrier-pro 88.3 1.8 6.1E-05 35.9 8.2 105 67-175 11-153 (271)
428 1wma_A Carbonyl reductase [NAD 88.1 2.2 7.7E-05 35.2 8.7 103 69-174 3-137 (276)
429 1f0y_A HCDH, L-3-hydroxyacyl-C 88.0 5.2 0.00018 34.0 11.1 95 71-172 16-133 (302)
430 3r3s_A Oxidoreductase; structu 88.0 4.7 0.00016 34.1 10.8 104 69-175 48-185 (294)
431 3lyl_A 3-oxoacyl-(acyl-carrier 87.9 5.5 0.00019 32.4 10.9 75 69-146 4-92 (247)
432 3v2g_A 3-oxoacyl-[acyl-carrier 87.9 6.9 0.00024 32.6 11.7 104 69-175 30-165 (271)
433 4fn4_A Short chain dehydrogena 87.8 3 0.0001 34.9 9.2 74 69-145 6-93 (254)
434 4g65_A TRK system potassium up 87.8 0.81 2.8E-05 41.9 6.1 65 70-143 3-75 (461)
435 3g0o_A 3-hydroxyisobutyrate de 87.6 3.1 0.00011 35.4 9.5 89 70-173 7-100 (303)
436 2vz8_A Fatty acid synthase; tr 87.3 0.63 2.1E-05 51.5 5.8 100 63-174 1661-1769(2512)
437 2ae2_A Protein (tropinone redu 87.2 5.3 0.00018 33.0 10.5 74 69-145 8-96 (260)
438 3c24_A Putative oxidoreductase 87.2 6.4 0.00022 33.1 11.1 84 71-172 12-98 (286)
439 3d1l_A Putative NADP oxidoredu 86.8 5.1 0.00017 33.2 10.2 88 70-173 10-100 (266)
440 3gvp_A Adenosylhomocysteinase 86.8 1.2 4.2E-05 40.3 6.5 89 67-174 217-306 (435)
441 3is3_A 17BETA-hydroxysteroid d 86.7 5.7 0.0002 33.0 10.5 105 69-176 17-153 (270)
442 4e12_A Diketoreductase; oxidor 86.5 4.3 0.00015 34.2 9.6 96 71-173 5-119 (283)
443 2dpo_A L-gulonate 3-dehydrogen 86.3 6.6 0.00023 33.9 10.8 96 71-173 7-121 (319)
444 3k31_A Enoyl-(acyl-carrier-pro 85.2 6.8 0.00023 33.1 10.3 104 69-176 29-169 (296)
445 3hwr_A 2-dehydropantoate 2-red 85.1 5.8 0.0002 34.1 9.9 92 69-174 18-119 (318)
446 3qiv_A Short-chain dehydrogena 85.0 4.7 0.00016 33.0 9.0 75 69-146 8-96 (253)
447 3b1f_A Putative prephenate deh 84.8 8 0.00027 32.4 10.5 88 71-172 7-98 (290)
448 3h2s_A Putative NADH-flavin re 84.0 13 0.00046 29.3 11.2 94 72-174 2-103 (224)
449 3t4x_A Oxidoreductase, short c 83.7 4.8 0.00016 33.5 8.5 77 69-146 9-95 (267)
450 1bg6_A N-(1-D-carboxylethyl)-L 83.7 7.7 0.00026 33.5 10.2 92 71-173 5-107 (359)
451 2zwa_A Leucine carboxyl methyl 83.7 17 0.00058 34.9 13.4 108 69-179 107-258 (695)
452 3tjr_A Short chain dehydrogena 83.6 5.8 0.0002 33.6 9.2 75 69-146 30-118 (301)
453 4hp8_A 2-deoxy-D-gluconate 3-d 83.6 11 0.00038 31.2 10.6 72 69-145 8-88 (247)
454 2aef_A Calcium-gated potassium 83.6 4.2 0.00014 33.0 8.0 89 69-174 8-104 (234)
455 3swr_A DNA (cytosine-5)-methyl 83.6 3.3 0.00011 41.7 8.4 74 69-149 539-631 (1002)
456 2hmt_A YUAA protein; RCK, KTN, 83.6 2.2 7.7E-05 31.3 5.8 68 70-145 6-79 (144)
457 2hwk_A Helicase NSP2; rossman 83.4 1.8 6.3E-05 36.8 5.5 59 122-180 191-259 (320)
458 3zwc_A Peroxisomal bifunctiona 83.3 16 0.00054 35.5 12.9 100 71-178 317-432 (742)
459 1eg2_A Modification methylase 83.3 0.61 2.1E-05 40.6 2.8 56 120-175 38-106 (319)
460 3k96_A Glycerol-3-phosphate de 83.2 5.8 0.0002 34.8 9.2 95 70-173 29-131 (356)
461 4ezb_A Uncharacterized conserv 83.2 6 0.00021 34.0 9.2 88 71-173 25-119 (317)
462 1xkq_A Short-chain reductase f 83.1 6.1 0.00021 33.0 9.0 76 69-145 5-95 (280)
463 1xg5_A ARPG836; short chain de 83.1 6.5 0.00022 32.7 9.2 76 69-145 31-120 (279)
464 3ucx_A Short chain dehydrogena 83.1 7.1 0.00024 32.3 9.3 73 69-144 10-96 (264)
465 1yxm_A Pecra, peroxisomal tran 82.8 8.4 0.00029 32.4 9.9 76 69-145 17-109 (303)
466 3ioy_A Short-chain dehydrogena 82.7 5.2 0.00018 34.3 8.6 77 69-146 7-97 (319)
467 3e8x_A Putative NAD-dependent 82.6 5.1 0.00018 32.3 8.1 70 69-147 20-95 (236)
468 3ksu_A 3-oxoacyl-acyl carrier 82.6 6.8 0.00023 32.4 9.0 103 69-174 10-146 (262)
469 3n58_A Adenosylhomocysteinase; 82.5 1.9 6.5E-05 39.3 5.7 89 67-174 244-333 (464)
470 3h7a_A Short chain dehydrogena 82.3 3.8 0.00013 33.8 7.3 74 69-146 6-93 (252)
471 1lnq_A MTHK channels, potassiu 82.2 4.9 0.00017 34.7 8.3 88 70-174 115-210 (336)
472 3rkr_A Short chain oxidoreduct 82.2 5.7 0.0002 32.8 8.4 76 68-146 27-116 (262)
473 1g0o_A Trihydroxynaphthalene r 81.9 12 0.00041 31.2 10.5 104 69-175 28-163 (283)
474 1xhl_A Short-chain dehydrogena 81.9 7.6 0.00026 32.9 9.2 76 69-145 25-115 (297)
475 3slk_A Polyketide synthase ext 81.3 0.14 4.9E-06 50.4 -2.3 92 65-174 341-441 (795)
476 1zej_A HBD-9, 3-hydroxyacyl-CO 81.2 9.8 0.00034 32.4 9.6 95 69-175 11-107 (293)
477 3k6j_A Protein F01G10.3, confi 81.2 16 0.00055 33.3 11.5 99 71-177 55-168 (460)
478 3sju_A Keto reductase; short-c 80.9 7.5 0.00026 32.5 8.7 75 69-146 23-111 (279)
479 1yb1_A 17-beta-hydroxysteroid 80.9 8.7 0.0003 31.9 9.1 75 69-146 30-118 (272)
480 3gaf_A 7-alpha-hydroxysteroid 80.8 7.5 0.00026 32.0 8.6 75 69-146 11-99 (256)
481 4e21_A 6-phosphogluconate dehy 80.6 3 0.0001 36.7 6.3 89 70-173 22-113 (358)
482 3mog_A Probable 3-hydroxybutyr 80.5 14 0.00048 33.9 10.9 98 71-176 6-121 (483)
483 1lld_A L-lactate dehydrogenase 80.4 22 0.00074 30.2 11.7 99 70-173 7-122 (319)
484 2cvz_A Dehydrogenase, 3-hydrox 80.3 6.7 0.00023 32.7 8.3 85 72-173 3-88 (289)
485 2cfc_A 2-(R)-hydroxypropyl-COM 80.3 7.6 0.00026 31.5 8.4 73 70-145 2-89 (250)
486 3awd_A GOX2181, putative polyo 80.2 9.7 0.00033 31.0 9.1 74 69-145 12-99 (260)
487 3o26_A Salutaridine reductase; 80.2 7.2 0.00025 32.7 8.5 76 69-146 11-101 (311)
488 3gg2_A Sugar dehydrogenase, UD 80.2 7 0.00024 35.5 8.8 100 71-174 3-121 (450)
489 3o38_A Short chain dehydrogena 79.9 8.1 0.00028 31.8 8.6 76 69-146 21-111 (266)
490 3tfo_A Putative 3-oxoacyl-(acy 79.6 7.8 0.00027 32.2 8.4 75 69-146 3-91 (264)
491 1qsg_A Enoyl-[acyl-carrier-pro 79.5 7.9 0.00027 31.9 8.4 103 69-175 8-148 (265)
492 1spx_A Short-chain reductase f 79.5 8.2 0.00028 32.0 8.5 77 69-146 5-96 (278)
493 2wtb_A MFP2, fatty acid multif 79.1 17 0.00057 35.3 11.5 96 71-174 313-426 (725)
494 1g60_A Adenine-specific methyl 79.1 0.55 1.9E-05 39.4 0.9 55 121-175 5-74 (260)
495 1iy8_A Levodione reductase; ox 79.1 11 0.00039 31.0 9.2 76 69-145 12-101 (267)
496 3f9i_A 3-oxoacyl-[acyl-carrier 79.1 8.6 0.00029 31.3 8.4 73 68-146 12-94 (249)
497 3sx2_A Putative 3-ketoacyl-(ac 79.0 10 0.00035 31.4 9.0 76 69-147 12-113 (278)
498 2jah_A Clavulanic acid dehydro 79.0 12 0.00041 30.5 9.2 74 69-145 6-93 (247)
499 3nyw_A Putative oxidoreductase 78.9 10 0.00036 31.0 8.9 77 69-146 6-97 (250)
500 3ojo_A CAP5O; rossmann fold, c 78.9 14 0.00047 33.5 10.2 100 68-175 9-129 (431)
No 1
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=100.00 E-value=7.4e-33 Score=244.83 Aligned_cols=210 Identities=25% Similarity=0.378 Sum_probs=183.9
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc
Q 048309 47 DEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC 126 (288)
Q Consensus 47 ~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 126 (288)
..++.+++.+++..+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.|++++...+++++++++.+
T Consensus 50 ~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (302)
T 3hem_A 50 DMTLEEAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ 129 (302)
T ss_dssp TCCHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC
Confidence 46789999999999999999999999999999999999999987458999999999999999999999999778999999
Q ss_pred ccCCCCCCCCCCEEEEccchhhh-------CHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccC---------ch
Q 048309 127 DYRQLPKAKKYDRIISCEMMEAV-------GHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRL---------SS 190 (288)
Q Consensus 127 d~~~~~~~~~fD~I~~~~~l~~~-------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---------~~ 190 (288)
|+.++ +++||+|++..+++|+ +.++...+++++.++|||||++++.++..+......... ..
T Consensus 130 d~~~~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (302)
T 3hem_A 130 GWEEF--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFI 207 (302)
T ss_dssp CGGGC--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHH
T ss_pred CHHHc--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchH
Confidence 99987 5899999999999999 446778999999999999999999998876543222111 12
Q ss_pred hhHhhhccCCCCCCCHHHHHHHHHHcCCh---------------------------HHHHhhcCChHHHHHHHHHHHHHH
Q 048309 191 DFIKEYIFPGGCLPSLSRITSAMAAASSL---------------------------SKILALGFNEKFIWTWEYYFDYSA 243 (288)
Q Consensus 191 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~---------------------------~~~~~~gf~~~~~~~w~~~~~~~~ 243 (288)
.|+.++++|++.+|+..++.+.++++ || ..+.+. |++.+.++|++|+..|+
T Consensus 208 ~~~~~~~~p~~~~~s~~~~~~~l~~a-Gf~~~~~~~~~~~y~~tl~~w~~~~~~~~~~~~~~-~~~~~~~~w~~yl~~~~ 285 (302)
T 3hem_A 208 KFILTEIFPGGRLPRISQVDYYSSNA-GWKVERYHRIGANYVPTLNAWADALQAHKDEAIAL-KGQETCDIYMHYLRGCS 285 (302)
T ss_dssp HHHHHHTCTTCCCCCHHHHHHHHHHH-TCEEEEEEECGGGHHHHHHHHHHHHHHTHHHHHHH-HCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCHHHHHHHHHhC-CcEEEEEEeCchhHHHHHHHHHHHHHHhHHHHHHH-hCHHHHHHHHHHHHHHH
Confidence 78899999999999999999888876 44 333344 78899999999999999
Q ss_pred hhcccCCccEEEEEEEc
Q 048309 244 AGFKPRTLGNYQIVLSR 260 (288)
Q Consensus 244 ~~f~~g~~~~~~~~~~k 260 (288)
++|+.|.++.+|+++.|
T Consensus 286 ~~f~~~~~~~~q~~~~~ 302 (302)
T 3hem_A 286 DLFRDKYTDVCQFTLVK 302 (302)
T ss_dssp HHHHTTSSEEEEEEEEC
T ss_pred HHHhCCCCeEEEEEEEC
Confidence 99999999999999986
No 2
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.98 E-value=2.7e-30 Score=229.93 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=188.6
Q ss_pred hhHHHHHhhhh----hcCChHHHHHhhhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHcCCCCC
Q 048309 16 NQKSYFLRHIS----RKNSLAQAHRNISYHYDLD---------------------EDEDLKVAQMRKHSLLIEKARVSKE 70 (288)
Q Consensus 16 ~~~~~~~~~~~----~~~~~~~~~~~~a~~Yd~~---------------------~~~~l~~a~~~~~~~l~~~~~~~~~ 70 (288)
++++..+.|.- +.++....+++++.+||.. ...++.+++.+.+..+++.+.+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Yd~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 91 (318)
T 2fk8_A 12 SGLVPRGSHMAEKPISPTKTRTRFEDIQAHYDVSDDFFALFQDPTRTYSCAYFEPPELTLEEAQYAKVDLNLDKLDLKPG 91 (318)
T ss_dssp --------------------------CGGGGCCCHHHHTTTSCTTCCCSCCCCSSTTCCHHHHHHHHHHHHHTTSCCCTT
T ss_pred hhHHHHHHHHhhhhcccCChhhhHHHHHHhcCCCHHHHHHHcCCCCCcceeeeCCCCCCHHHHHHHHHHHHHHhcCCCCc
Confidence 34444444454 7788888999999999954 2347788999999999999998899
Q ss_pred CEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhC
Q 048309 71 HEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVG 150 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~ 150 (288)
.+|||||||+|.++..+++..+++|+|+|+|+.+++.+++++...++..+++++++|+.+++ ++||+|++..+++|++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~l~~~~ 169 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEAFEHFG 169 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESCGGGTC
T ss_pred CEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeChHHhcC
Confidence 99999999999999999986577999999999999999999998888778999999998875 7899999999999998
Q ss_pred HhhHHHHHHHHhcccccCcEEEEEeecCCCcccccc---------cCchhhHhhhccCCCCCCCHHHHHHHHHHcCCh--
Q 048309 151 HEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEY---------RLSSDFIKEYIFPGGCLPSLSRITSAMAAASSL-- 219 (288)
Q Consensus 151 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~-- 219 (288)
.+++..+++++.++|||||++++.++..+....... .....++..+++|++.+|+..++.+.++++ ||
T Consensus 170 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~a-Gf~~ 248 (318)
T 2fk8_A 170 HENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKA-GFTV 248 (318)
T ss_dssp GGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHT-TCBC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhC-CCEE
Confidence 788999999999999999999999888665322110 112356778889989999999999888876 44
Q ss_pred -------------------------HHHHhhcCChHHHHHHHHHHHHHHhhcccCCccEEEEEEEcCCC
Q 048309 220 -------------------------SKILALGFNEKFIWTWEYYFDYSAAGFKPRTLGNYQIVLSRPGN 263 (288)
Q Consensus 220 -------------------------~~~~~~gf~~~~~~~w~~~~~~~~~~f~~g~~~~~~~~~~k~~~ 263 (288)
..+.. .+++.+.++|..|+..|+++|+.|.++.+|++++||+.
T Consensus 249 ~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~~~~k~~~ 316 (318)
T 2fk8_A 249 PEPLSLRPHYIKTLRIWGDTLQSNKDKAIE-VTSEEVYNRYMKYLRGCEHYFTDEMLDCSLVTYLKPGA 316 (318)
T ss_dssp CCCEECHHHHHHHHHHHHHHHHHTHHHHHH-HSCHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEECTTC
T ss_pred EEEEecchhHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHCCCCeEEEEEEEeCCC
Confidence 12222 25678899999999999999999999999999999853
No 3
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.97 E-value=3.2e-30 Score=226.04 Aligned_cols=211 Identities=27% Similarity=0.431 Sum_probs=179.5
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEE
Q 048309 46 EDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYL 125 (288)
Q Consensus 46 ~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~ 125 (288)
...++.+++.+.+..+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.+++++...++..+++++.
T Consensus 41 ~~~~l~~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 41 DDMTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp TTCCHHHHHHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 34678899999999999999989999999999999999999996657799999999999999999999888877899999
Q ss_pred cccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccc---------cccCchhhHhhh
Q 048309 126 CDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYN---------EYRLSSDFIKEY 196 (288)
Q Consensus 126 ~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---------~~~~~~~~~~~~ 196 (288)
+|+.+++ ++||+|++..+++|++++++..+++++.++|||||.+++.++..+..... .......++..+
T Consensus 121 ~d~~~~~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (287)
T 1kpg_A 121 AGWEQFD--EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTE 198 (287)
T ss_dssp SCGGGCC--CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHH
T ss_pred CChhhCC--CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHhe
Confidence 9998876 89999999999999987789999999999999999999998876543221 011234567788
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCh---------------------------HHHHhhcCChHHHHHHHHHHHHHHhhcccC
Q 048309 197 IFPGGCLPSLSRITSAMAAASSL---------------------------SKILALGFNEKFIWTWEYYFDYSAAGFKPR 249 (288)
Q Consensus 197 i~~~~~~p~~~~~~~~~~~~~~~---------------------------~~~~~~gf~~~~~~~w~~~~~~~~~~f~~g 249 (288)
++|++.+|+..++.+.++++ || +.+.+. +.+.+.+.|.+|+..|+++|+.|
T Consensus 199 ~~~~~~~~s~~~~~~~l~~a-Gf~~~~~~~~~~~y~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~f~~g 276 (287)
T 1kpg_A 199 IFPGGRLPSIPMVQECASAN-GFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIAL-QSEEVYERYMKYLTGCAEMFRIG 276 (287)
T ss_dssp TSTTCCCCCHHHHHHHHHTT-TCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCCCCHHHHHHHHHhC-CcEEEEEEeCcHhHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999888776 44 223333 45667788999999999999999
Q ss_pred CccEEEEEEEc
Q 048309 250 TLGNYQIVLSR 260 (288)
Q Consensus 250 ~~~~~~~~~~k 260 (288)
.++.+|++++|
T Consensus 277 ~~~~~~~~~~k 287 (287)
T 1kpg_A 277 YIDVNQFTCQK 287 (287)
T ss_dssp SEEEEEEEEEC
T ss_pred CCeEEEEEEEC
Confidence 99999999986
No 4
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.92 E-value=8.9e-24 Score=185.81 Aligned_cols=209 Identities=18% Similarity=0.248 Sum_probs=167.6
Q ss_pred CCCHHHHHHHHHHHHHHHc----CCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceE
Q 048309 47 DEDLKVAQMRKHSLLIEKA----RVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIR 122 (288)
Q Consensus 47 ~~~l~~a~~~~~~~l~~~~----~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~ 122 (288)
...+..++.+....+++.+ .+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.++++....+++.+++
T Consensus 56 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~ 135 (297)
T 2o57_A 56 QDEIREASLRTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNIT 135 (297)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEE
T ss_pred CcchHHHHHHHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceE
Confidence 4578889999999999999 888899999999999999999998756799999999999999999999888877899
Q ss_pred EEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCC
Q 048309 123 LYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGG 201 (288)
Q Consensus 123 ~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 201 (288)
++++|+.+++ ++++||+|++..+++|+ .++..+++++.++|||||.+++.+...+...... ....+...+..+
T Consensus 136 ~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~~~~~~~~~~~~-- 209 (297)
T 2o57_A 136 VKYGSFLEIPCEDNSYDFIWSQDAFLHS--PDKLKVFQECARVLKPRGVMAITDPMKEDGIDKS--SIQPILDRIKLH-- 209 (297)
T ss_dssp EEECCTTSCSSCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG--GGHHHHHHHTCS--
T ss_pred EEEcCcccCCCCCCCEeEEEecchhhhc--CCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchH--HHHHHHHHhcCC--
Confidence 9999999988 67899999999999999 5689999999999999999999887654322111 122333333332
Q ss_pred CCCCHHHHHHHHHHcCCh--------------------HHHH------hhcCChHHHHHHHHHHHHHHhhcccCCccEEE
Q 048309 202 CLPSLSRITSAMAAASSL--------------------SKIL------ALGFNEKFIWTWEYYFDYSAAGFKPRTLGNYQ 255 (288)
Q Consensus 202 ~~p~~~~~~~~~~~~~~~--------------------~~~~------~~gf~~~~~~~w~~~~~~~~~~f~~g~~~~~~ 255 (288)
..++..++.+.+.++ || ..+. ...++..+.+.|...+..+...+..|.++..+
T Consensus 210 ~~~~~~~~~~~l~~a-Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 288 (297)
T 2o57_A 210 DMGSLGLYRSLAKEC-GLVTLRTFSRPDSLVHHYSKVKAELIKRSSEIASFCSPEFQANMKRGLEHWIEGGRAGKLTWGG 288 (297)
T ss_dssp SCCCHHHHHHHHHHT-TEEEEEEEECHHHHHHHHHHHHHHHHHTHHHHTTTSCHHHHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCHHHHHHHHHHC-CCeEEEEEECchhhHHHHHHHHHHHHHhHHHHhccCCHHHHHHHHHHHHHHHHhccCCeEEEEE
Confidence 355677777766665 44 1111 12356677888888888788889999999999
Q ss_pred EEEEcCC
Q 048309 256 IVLSRPG 262 (288)
Q Consensus 256 ~~~~k~~ 262 (288)
++++||.
T Consensus 289 ~~a~Kp~ 295 (297)
T 2o57_A 289 MLFRKSD 295 (297)
T ss_dssp EEEEESS
T ss_pred EEEECCC
Confidence 9999985
No 5
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.92 E-value=1.2e-23 Score=182.68 Aligned_cols=168 Identities=19% Similarity=0.224 Sum_probs=137.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcc
Q 048309 48 EDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCD 127 (288)
Q Consensus 48 ~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d 127 (288)
.++.+++.+....+++.+.+.++.+|||||||+|.++..+++..+++|+|+|+|+.+++.+++++...+++++++++.+|
T Consensus 40 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d 119 (273)
T 3bus_A 40 VSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYAD 119 (273)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred cCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECc
Confidence 47888999999999999998899999999999999999999866789999999999999999999998887789999999
Q ss_pred cCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCH
Q 048309 128 YRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSL 206 (288)
Q Consensus 128 ~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 206 (288)
+.+++ ++++||+|++..+++|+ .+...+++++.++|||||++++.++................+. ..++....++.
T Consensus 120 ~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 196 (273)
T 3bus_A 120 AMDLPFEDASFDAVWALESLHHM--PDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR-AGGGVLSLGGI 196 (273)
T ss_dssp TTSCCSCTTCEEEEEEESCTTTS--SCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH-HHHTCCCCCCH
T ss_pred cccCCCCCCCccEEEEechhhhC--CCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH-hhcCccCCCCH
Confidence 99988 66899999999999999 6779999999999999999999887654322111100001111 12345667888
Q ss_pred HHHHHHHHHcCCh
Q 048309 207 SRITSAMAAASSL 219 (288)
Q Consensus 207 ~~~~~~~~~~~~~ 219 (288)
.++.+.++++ ||
T Consensus 197 ~~~~~~l~~a-Gf 208 (273)
T 3bus_A 197 DEYESDVRQA-EL 208 (273)
T ss_dssp HHHHHHHHHT-TC
T ss_pred HHHHHHHHHc-CC
Confidence 8888887776 44
No 6
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.88 E-value=8e-22 Score=172.38 Aligned_cols=228 Identities=14% Similarity=0.151 Sum_probs=158.2
Q ss_pred hHHHHHhhhhhcCCCCCCCHHHHH-----HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHH
Q 048309 31 LAQAHRNISYHYDLDEDEDLKVAQ-----MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQM 105 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~~~~~l~~a~-----~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~ 105 (288)
....|+.++..|+........... .+.+..+++.+... +.+|||||||+|.++..+++. +.+|+|+|+|+.++
T Consensus 26 ~~~~fd~~a~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~ 103 (285)
T 4htf_A 26 QDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMI 103 (285)
T ss_dssp ------CHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHH
T ss_pred cccchhhHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHH
Confidence 345677788888755333332211 12245566666644 679999999999999999987 78999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCccc
Q 048309 106 KYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARY 183 (288)
Q Consensus 106 ~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (288)
+.|++++...+++.+++++++|+.+++ .+++||+|++..+++|+ .++..+++++.++|||||.+++.+........
T Consensus 104 ~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 181 (285)
T 4htf_A 104 DRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWV--ADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLM 181 (285)
T ss_dssp HHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHH
T ss_pred HHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcc--cCHHHHHHHHHHHcCCCeEEEEEEeCCchHHH
Confidence 999999998888778999999999987 67899999999999999 67899999999999999999998765332111
Q ss_pred ccc-cCchhhHhhhc-------cCCCCCCCHHHHHHHHHHcCChHHHHhhcC-------------ChHHHHHHHHHHHHH
Q 048309 184 NEY-RLSSDFIKEYI-------FPGGCLPSLSRITSAMAAASSLSKILALGF-------------NEKFIWTWEYYFDYS 242 (288)
Q Consensus 184 ~~~-~~~~~~~~~~i-------~~~~~~p~~~~~~~~~~~~~~~~~~~~~gf-------------~~~~~~~w~~~~~~~ 242 (288)
... ......+.... .......+..++.+.++++ ||+.+...++ ...+.+++......|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 260 (285)
T 4htf_A 182 HNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA-GWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYC 260 (285)
T ss_dssp HHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT-TCEEEEEEEESSSGGGCSSTTHHHHTHHHHHHHHHHHT
T ss_pred HHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC-CCceeeeeeEEEeeecccccccCcccHHHHHHHHHHhc
Confidence 100 00001111111 1112345677888777776 5532211111 012456777788888
Q ss_pred HhhcccCCccEEEEEEEcCCC
Q 048309 243 AAGFKPRTLGNYQIVLSRPGN 263 (288)
Q Consensus 243 ~~~f~~g~~~~~~~~~~k~~~ 263 (288)
......+....++++++||..
T Consensus 261 ~~~~~~~~~~~~~~varK~~~ 281 (285)
T 4htf_A 261 RQEPYITLGRYIHVTARKPQS 281 (285)
T ss_dssp TSTTGGGGCSEEEEEEECCCC
T ss_pred CCChHHHHHhheEEEEEcCCc
Confidence 888888888999999999865
No 7
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.88 E-value=3.7e-21 Score=165.83 Aligned_cols=195 Identities=18% Similarity=0.259 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
........+++.+.+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.++++.... .+++++++|+.+++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~ 115 (266)
T 3ujc_A 39 GGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKE 115 (266)
T ss_dssp THHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCC
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCC
Confidence 344556778888888899999999999999999999865789999999999999999886544 47999999999988
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccC-CCCCCCHHHHH
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFP-GGCLPSLSRIT 210 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~~~ 210 (288)
++++||+|++..+++|+++.++..+++++.++|||||.+++.++..+... .....+..++.+ +...++..++.
T Consensus 116 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 190 (266)
T 3ujc_A 116 FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKE-----NWDDEFKEYVKQRKYTLITVEEYA 190 (266)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG-----GCCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc-----cchHHHHHHHhcCCCCCCCHHHHH
Confidence 67899999999999999888999999999999999999999887655411 111122222222 23467788888
Q ss_pred HHHHHcCCh---------------------------HHHHhhcCChHHH----HHHHHHHHHHHhhcccCCccEEEEEEE
Q 048309 211 SAMAAASSL---------------------------SKILALGFNEKFI----WTWEYYFDYSAAGFKPRTLGNYQIVLS 259 (288)
Q Consensus 211 ~~~~~~~~~---------------------------~~~~~~gf~~~~~----~~w~~~~~~~~~~f~~g~~~~~~~~~~ 259 (288)
+.+.++ || +.+... +++... ..|..++..|.. |.+....++++
T Consensus 191 ~~l~~~-Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----g~~~w~~~~~~ 264 (266)
T 3ujc_A 191 DILTAC-NFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKL-FSEKKFISLDDGWSRKIKDSKR----KMQRWGYFKAT 264 (266)
T ss_dssp HHHHHT-TCEEEEEEECHHHHHHHHHHHHHHHHHTHHHHHHH-SCHHHHHHHHHHHHHHHHHHHT----TSEEEEEEEEE
T ss_pred HHHHHc-CCeEEEEEeCCHHHHHHHHHHHHHHHhCHHHHHHh-cCHHHHHHHHHHHHHHHHHHHc----CcccceEEEEe
Confidence 777776 44 111111 333333 337777776664 44557778888
Q ss_pred cC
Q 048309 260 RP 261 (288)
Q Consensus 260 k~ 261 (288)
||
T Consensus 265 Kp 266 (266)
T 3ujc_A 265 KN 266 (266)
T ss_dssp CC
T ss_pred CC
Confidence 86
No 8
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.87 E-value=2e-21 Score=172.28 Aligned_cols=195 Identities=18% Similarity=0.233 Sum_probs=147.0
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCC
Q 048309 59 SLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKK 136 (288)
Q Consensus 59 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~ 136 (288)
..+++.+. +.++.+|||+|||+|.++..+++..+++|+|+|+++.+++.|+++++..++..+++++++|+.+++ ++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGA 185 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTC
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCC
Confidence 45667776 778899999999999999999987578999999999999999999999998778999999999988 6789
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCHHHHHHHHHHc
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMAAA 216 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 216 (288)
||+|++..+++|++ ...+++++.++|||||++++.+....... ........++.....+ ..++..++.+.++++
T Consensus 186 fD~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~s~~~~~~~l~~a 259 (312)
T 3vc1_A 186 VTASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRY-GQPSKWVSQINAHFEC--NIHSRREYLRAMADN 259 (312)
T ss_dssp EEEEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTT-CSCCHHHHHHHHHHTC--CCCBHHHHHHHHHTT
T ss_pred EeEEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccc-cchhHHHHHHHhhhcC--CCCCHHHHHHHHHHC
Confidence 99999999999993 89999999999999999999876644321 1111122334433333 367788888777665
Q ss_pred CChHHHHhhcCChHHHHHHHHHHH---------HHHhhcccCCccEEEEEEEc
Q 048309 217 SSLSKILALGFNEKFIWTWEYYFD---------YSAAGFKPRTLGNYQIVLSR 260 (288)
Q Consensus 217 ~~~~~~~~~gf~~~~~~~w~~~~~---------~~~~~f~~g~~~~~~~~~~k 260 (288)
||+.+....+.....+.|...+. ..-..|..|..+.+.++++|
T Consensus 260 -Gf~~~~~~~~~~~~~~~w~~~~~~~~~~g~~~~~~~~~~~~~~~y~~i~a~k 311 (312)
T 3vc1_A 260 -RLVPHTIVDLTPDTLPYWELRATSSLVTGIEKAFIESYRDGSFQYVLIAADR 311 (312)
T ss_dssp -TEEEEEEEECHHHHHHHHHHHTTSTTCCSCHHHHHHHHHHTSEEEEEEEEEE
T ss_pred -CCEEEEEEeCCHHHHHHHHHHHHHhhhhcChHHHHHHHHhcCCcEEEEEEee
Confidence 66444443444444555543221 12234666888888888887
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.86 E-value=4.6e-21 Score=165.83 Aligned_cols=124 Identities=15% Similarity=0.220 Sum_probs=107.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL 131 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 131 (288)
.+.+..+++.. ++++.+|||||||+|..+..+++. ++++|+|+|+|+.|++.|+++++..+...+++++++|+.++
T Consensus 57 ~~~i~~l~~~~-~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~ 135 (261)
T 4gek_A 57 ISMIGMLAERF-VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI 135 (261)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC
T ss_pred HHHHHHHHHHh-CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc
Confidence 34444455543 468899999999999999999986 46799999999999999999999888877899999999998
Q ss_pred CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 132 PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+. ++||+|++..+++|++++++..++++++++|||||.+++.+...+.
T Consensus 136 ~~-~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~ 183 (261)
T 4gek_A 136 AI-ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFE 183 (261)
T ss_dssp CC-CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCS
T ss_pred cc-cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCC
Confidence 74 4699999999999998888889999999999999999998876554
No 10
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.86 E-value=2.3e-21 Score=167.92 Aligned_cols=152 Identities=16% Similarity=0.209 Sum_probs=118.7
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 57 KHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 57 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
....+++.+. +.++.+|||||||+|.++..+++.++++|+|+|+|+.+++.++++++..+++++++++++|+.+++ ++
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 112 (267)
T 3kkz_A 33 VTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN 112 (267)
T ss_dssp HHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCC
Confidence 3444555555 678899999999999999999988666999999999999999999999999878999999999988 67
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCHHHHHHHHH
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMA 214 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 214 (288)
++||+|++..+++|+ ++..+++++.++|||||++++.+......... .....++... + ..+++..++.+.+.
T Consensus 113 ~~fD~i~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~~~~~~~~~l~ 184 (267)
T 3kkz_A 113 EELDLIWSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSECSWFTDERP--AEINDFWMDA-Y--PEIDTIPNQVAKIH 184 (267)
T ss_dssp TCEEEEEESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCC--HHHHHHHHHH-C--TTCEEHHHHHHHHH
T ss_pred CCEEEEEEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEeeecCCCCh--HHHHHHHHHh-C--CCCCCHHHHHHHHH
Confidence 899999999999998 46889999999999999999988653221110 0111112111 1 24567777777766
Q ss_pred Hc
Q 048309 215 AA 216 (288)
Q Consensus 215 ~~ 216 (288)
++
T Consensus 185 ~a 186 (267)
T 3kkz_A 185 KA 186 (267)
T ss_dssp HT
T ss_pred HC
Confidence 65
No 11
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.86 E-value=1.9e-20 Score=162.57 Aligned_cols=204 Identities=14% Similarity=0.164 Sum_probs=148.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHcc--CCEEEEEcCCHH------HHHHHHHHHHHcCCCC
Q 048309 48 EDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQT--GCNYTGITLSAE------QMKYAEMKVNEAGLQD 119 (288)
Q Consensus 48 ~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~giD~s~~------~~~~a~~~~~~~g~~~ 119 (288)
.++..++.++...+++.+.+.++.+|||||||+|.++..+++.. ..+|+|+|+|+. +++.+++++...++.+
T Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 22 RTIQRRQTAHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 35667888899999999999999999999999999999999873 279999999997 9999999999888767
Q ss_pred ceEEEEcc-c--CCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchh-hHh
Q 048309 120 HIRLYLCD-Y--RQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSD-FIK 194 (288)
Q Consensus 120 ~v~~~~~d-~--~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~ 194 (288)
+++++++| + ..++ ++++||+|++..+++|+ .+...+++.+.++++|||.+++.++..+............ +..
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYF--ASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQ 179 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGS--SCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHH
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhC--CCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHH
Confidence 89999998 3 3344 56899999999999999 4556677888888888999999988765432211111000 111
Q ss_pred hhc---c---CC--CCCCCHHHHHHHHHHcCCh---------------------------HHHHh-hcCChHHHHHHHHH
Q 048309 195 EYI---F---PG--GCLPSLSRITSAMAAASSL---------------------------SKILA-LGFNEKFIWTWEYY 238 (288)
Q Consensus 195 ~~i---~---~~--~~~p~~~~~~~~~~~~~~~---------------------------~~~~~-~gf~~~~~~~w~~~ 238 (288)
... . +. ...++..++.+.++++ || +.+.. .||++.+.++|..
T Consensus 180 ~~~~~~~~~~~~~~~~~~s~~~l~~~l~~a-Gf~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 257 (275)
T 3bkx_A 180 GLLYAIAPSDVANIRTLITPDTLAQIAHDN-TWTYTAGTIVEDPTLDDAHWEIATTNALLTELKLSTDLRDRVKPLLEA- 257 (275)
T ss_dssp HHHHHHSCCTTCSCCCCCCHHHHHHHHHHH-TCEEEECCCBCCTTCTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH-
T ss_pred HHHhhccccccccccccCCHHHHHHHHHHC-CCeeEEEEEecCCCCCCchhhHHHHHHHHHHHHhhccccHHHHHHHHH-
Confidence 110 0 11 2367888888877775 33 11111 5677888888887
Q ss_pred HHHHHhhcccCCccEEEEEEE
Q 048309 239 FDYSAAGFKPRTLGNYQIVLS 259 (288)
Q Consensus 239 ~~~~~~~f~~g~~~~~~~~~~ 259 (288)
.|+.+ ...+..+|+++.
T Consensus 258 --~~~~g--~~~~~~~~~~~~ 274 (275)
T 3bkx_A 258 --MSHNG--TASLATFTGRIT 274 (275)
T ss_dssp --HTTSC--CCCCCEEEEEEE
T ss_pred --HHhcc--ccccceeeEEEe
Confidence 34444 447788887763
No 12
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.83 E-value=1.6e-20 Score=161.93 Aligned_cols=178 Identities=14% Similarity=0.088 Sum_probs=127.0
Q ss_pred CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHH
Q 048309 29 NSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYA 108 (288)
Q Consensus 29 ~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a 108 (288)
+.....|+.++..|....... ........+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.|++.|
T Consensus 8 ~s~a~~wd~~a~~f~~~~~~~---~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~A 83 (261)
T 3iv6_A 8 NSKAEAWELIGNQFWTIGRVA---ARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDL 83 (261)
T ss_dssp CTTHHHHHTTTTHHHHTSCGG---GSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHhhcc---ccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHH
Confidence 344566666665554331100 00234567788888889999999999999999999986 78999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcccCC--CC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC-----
Q 048309 109 EMKVNEAGLQDHIRLYLCDYRQ--LP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD----- 180 (288)
Q Consensus 109 ~~~~~~~g~~~~v~~~~~d~~~--~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~----- 180 (288)
++++.... +.....++.. .. .+++||+|++..+++|++.++...+++++.++| |||+++++......
T Consensus 84 r~~~~~~~----v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~ 158 (261)
T 3iv6_A 84 AEALADRC----VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLGFYDIDLK 158 (261)
T ss_dssp HHHTSSSC----CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHH
T ss_pred HHHHHhcc----ceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccCcccccHH
Confidence 99875431 2222222222 11 357999999999999998788899999999999 99999997643211
Q ss_pred ------------------cccccccCchhhHhhhccCCCCCCCHHHHHHHHHHc
Q 048309 181 ------------------ARYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMAAA 216 (288)
Q Consensus 181 ------------------~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~ 216 (288)
.....+.....|+.++++|++.+|+.. +++++...
T Consensus 159 ~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~p~g~~~~~~-~~~~~~~~ 211 (261)
T 3iv6_A 159 LIEYGEQSGTLAKFFDPSDKTFHFREAGDVLDRALVPHGLIDKPT-LLEWYRRR 211 (261)
T ss_dssp HHHHHHTTTCHHHHEETTTTEEEGGGTTHHHHHHCCCCTTCCHHH-HHHHHHHT
T ss_pred HHHHHHhcCCeeeeecCcccceehhhhhhHHHhccCCCCcccHHH-HHHHHHhc
Confidence 001111334679999999999999764 44455543
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.83 E-value=1.5e-19 Score=155.20 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=108.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
..+..+++.+.+.++.+|||||||+|..+..+++..+.+|+|+|+|+.+++.++++++..++..+++++++|+.+++.++
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 45667788888889999999999999999999987677999999999999999999999888778999999999887668
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+||+|++..+++|+ .++..+++++.++|||||++++.+..
T Consensus 103 ~fD~V~~~~~~~~~--~~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 103 KCDVAACVGATWIA--GGFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp CEEEEEEESCGGGT--SSSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred CCCEEEECCChHhc--CCHHHHHHHHHHHcCCCeEEEEecCc
Confidence 99999999999999 57899999999999999999997754
No 14
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.82 E-value=2e-20 Score=158.58 Aligned_cols=120 Identities=16% Similarity=0.291 Sum_probs=103.8
Q ss_pred HHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 58 HSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 58 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
+..+++.+. ..++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.+++++...+ +++++++|+.+++..+
T Consensus 32 ~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~ 108 (234)
T 3dtn_A 32 YGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEE 108 (234)
T ss_dssp HHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCS
T ss_pred HHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCC
Confidence 355555554 457789999999999999999987 57899999999999999999876543 7999999999988558
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+||+|++..+++|++......+++++.++|||||.+++.+...+.
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 999999999999997666678999999999999999998877554
No 15
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.82 E-value=4.7e-20 Score=153.59 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=99.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC-----------CCCceEEEEc
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAG-----------LQDHIRLYLC 126 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g-----------~~~~v~~~~~ 126 (288)
+..+++.+.+.++.+|||+|||+|..+..+++. +.+|+|+|+|+.|++.|+++..... ...+++++++
T Consensus 11 l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 89 (203)
T 1pjz_A 11 LQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCG 89 (203)
T ss_dssp HHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEE
T ss_pred HHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEEC
Confidence 444566677778899999999999999999987 7899999999999999998764210 0147999999
Q ss_pred ccCCCC-CC-CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 127 DYRQLP-KA-KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 127 d~~~~~-~~-~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|+.+++ .+ ++||+|++..+++|++.++...+++++.++|||||++++.+..
T Consensus 90 d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 90 DFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp CCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred ccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 999998 43 7999999999999998778889999999999999996655443
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.82 E-value=1.6e-19 Score=155.09 Aligned_cols=154 Identities=16% Similarity=0.201 Sum_probs=119.2
Q ss_pred HHHHHHHHc-CCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 57 KHSLLIEKA-RVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 57 ~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
....+++.+ .+.++.+|||||||+|.++..+++..+.+|+|+|+|+.+++.+++++...+++++++++++|+.+++ ++
T Consensus 33 ~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 112 (257)
T 3f4k_A 33 ATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN 112 (257)
T ss_dssp HHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC
Confidence 344455555 4667889999999999999999998445999999999999999999999999777999999999988 67
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCHHHHHHHHH
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMA 214 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~ 214 (288)
++||+|++..+++|+ ++..+++++.++|+|||++++.+......... .....++... . ..+++..++.+.+.
T Consensus 113 ~~fD~v~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~~~~~~~~~l~ 184 (257)
T 3f4k_A 113 EELDLIWSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEASWFTSERP--AEIEDFWMDA-Y--PEISVIPTCIDKME 184 (257)
T ss_dssp TCEEEEEEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCC--HHHHHHHHHH-C--TTCCBHHHHHHHHH
T ss_pred CCEEEEEecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEeeccCCCCh--HHHHHHHHHh-C--CCCCCHHHHHHHHH
Confidence 899999999999998 46889999999999999999988652221100 0111122221 1 23667788887776
Q ss_pred HcCCh
Q 048309 215 AASSL 219 (288)
Q Consensus 215 ~~~~~ 219 (288)
++ ||
T Consensus 185 ~a-Gf 188 (257)
T 3f4k_A 185 RA-GY 188 (257)
T ss_dssp HT-TE
T ss_pred HC-CC
Confidence 65 44
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.82 E-value=2.4e-19 Score=149.72 Aligned_cols=121 Identities=18% Similarity=0.221 Sum_probs=108.2
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K 133 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~ 133 (288)
......+++.+...++ +|||+|||+|.++..+++.++.+++|+|+|+.+++.+++++...++..+++++++|+.+++ +
T Consensus 30 ~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 30 PIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 3455677777777666 9999999999999999987667999999999999999999999988778999999999988 6
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
+++||+|++..+++|+ .++..+++++.++|+|||.+++.+...
T Consensus 109 ~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFW--EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp TTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cccccEEEECchHhhc--cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 7899999999999999 788999999999999999999976443
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.81 E-value=8.8e-20 Score=153.08 Aligned_cols=142 Identities=18% Similarity=0.152 Sum_probs=101.1
Q ss_pred HHHHHhhhhhcCCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHH
Q 048309 32 AQAHRNISYHYDLDED--EDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAE 109 (288)
Q Consensus 32 ~~~~~~~a~~Yd~~~~--~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~ 109 (288)
...|+.++..||.... ..........+..+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++
T Consensus 6 ~~~f~~~a~~y~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 6 NGLFDEWAHTYDSFVQGEDIQYKEVFAHYEDILEDVVNKSFGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp ------------------CCTTTTTTTTHHHHHHHHHHTCCSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHhHHHHHHHHHHHHHHhhccCCCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHH
Confidence 3457777777876421 0111111223345566665568889999999999999999986 789999999999999999
Q ss_pred HHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 110 MKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 110 ~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+++. .+++++++|+.+++..++||+|++..+++|++......+++++.++|||||.+++.+...+
T Consensus 85 ~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 85 EKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp HHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred HhCC-----CceEEEeCChhhcCCCCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 8764 3689999999998844899999999999999655555699999999999999999875543
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.81 E-value=4.6e-19 Score=148.76 Aligned_cols=119 Identities=14% Similarity=0.256 Sum_probs=100.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----ceEEEEcccCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQD----HIRLYLCDYRQL 131 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~----~v~~~~~d~~~~ 131 (288)
....+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...+++. +++++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (219)
T 3jwg_A 17 RLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR 96 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC
T ss_pred HHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc
Confidence 3444444444457789999999999999999987 34799999999999999999988776643 799999999877
Q ss_pred C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+ ..++||+|++..+++|++.++...+++++.++|||||+++...
T Consensus 97 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 97 DKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp CGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 7 5689999999999999976677899999999999999666543
No 20
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.81 E-value=9.4e-20 Score=157.02 Aligned_cols=158 Identities=16% Similarity=0.156 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
.+...+..+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++++..+++ +++++++|+.+++
T Consensus 21 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~ 98 (260)
T 1vl5_A 21 AKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMP 98 (260)
T ss_dssp --CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCC
T ss_pred cCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCC
Confidence 44456677888888888999999999999999999886 469999999999999999999988874 7999999999988
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccC-CCCCCCHHHHH
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFP-GGCLPSLSRIT 210 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~~~ 210 (288)
++++||+|++..+++|+ .++..+++++.++|||||.+++.+...+..... ............+ .....+..++.
T Consensus 99 ~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (260)
T 1vl5_A 99 FTDERFHIVTCRIAAHHF--PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAF--DVFYNYVEKERDYSHHRAWKKSDWL 174 (260)
T ss_dssp SCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHH
T ss_pred CCCCCEEEEEEhhhhHhc--CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHH--HHHHHHHHHhcCccccCCCCHHHHH
Confidence 67899999999999999 678899999999999999999987665443111 0001111111112 22345677777
Q ss_pred HHHHHc
Q 048309 211 SAMAAA 216 (288)
Q Consensus 211 ~~~~~~ 216 (288)
+.+.++
T Consensus 175 ~~l~~a 180 (260)
T 1vl5_A 175 KMLEEA 180 (260)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 777665
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.81 E-value=4.6e-19 Score=148.64 Aligned_cols=119 Identities=14% Similarity=0.230 Sum_probs=101.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC----ceEEEEcccCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQD----HIRLYLCDYRQL 131 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~----~v~~~~~d~~~~ 131 (288)
....+++.+...++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++...+++. +++++++|+...
T Consensus 17 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~ 96 (217)
T 3jwh_A 17 RMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ 96 (217)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc
Confidence 3344455555457789999999999999999987 44799999999999999999998777653 799999999877
Q ss_pred C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+ ..++||+|++..+++|++.++...+++++.++|||||++++..
T Consensus 97 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 97 DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 6 5689999999999999977777999999999999999777643
No 22
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.80 E-value=9.5e-19 Score=146.63 Aligned_cols=120 Identities=15% Similarity=0.207 Sum_probs=107.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
...+++.+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+++++...+++ +++++++|+.+++ ++
T Consensus 26 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 26 PEKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCS
T ss_pred HHHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCC
Confidence 356777778888999999999999999999987 3479999999999999999999988885 8999999999987 67
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
++||+|++..+++|+ .+...+++++.++|+|||.+++.++....
T Consensus 105 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 105 NTVDFIFMAFTFHEL--SEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp SCEEEEEEESCGGGC--SSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred CCeeEEEeehhhhhc--CCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 899999999999999 67899999999999999999998876554
No 23
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.80 E-value=4.8e-19 Score=148.02 Aligned_cols=139 Identities=18% Similarity=0.225 Sum_probs=111.5
Q ss_pred HHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 048309 32 AQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEM 110 (288)
Q Consensus 32 ~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~ 110 (288)
...|+..+..|+.. ...........+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++
T Consensus 12 ~~~~~~~a~~y~~~----~~~~~~~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 12 LSYYRARASEYDAT----FVPYMDSAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHGGGHHHH----HHHHHTTTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG
T ss_pred HHHHHHHHHHHHHh----hhhHHHHHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh
Confidence 34566666666641 22222222445666654 567789999999999999999987 7899999999999999987
Q ss_pred HHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 111 KVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 111 ~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
.+. .+++++++|+.++.++++||+|++..+++|++.+....+++++.++|+|||.+++.+...+.
T Consensus 87 ----~~~-~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 151 (218)
T 3ou2_A 87 ----HGL-DNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHE 151 (218)
T ss_dssp ----GCC-TTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC
T ss_pred ----cCC-CCeEEEecccccCCCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 454 47999999999886678999999999999997666799999999999999999999887643
No 24
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.79 E-value=2.1e-18 Score=146.87 Aligned_cols=156 Identities=21% Similarity=0.248 Sum_probs=120.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAK 135 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~ 135 (288)
....+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...+++ +++++++|+.+++ +++
T Consensus 9 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 9 SLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTT
T ss_pred CcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCC
Confidence 3456677788889999999999999999999886 569999999999999999999888874 7999999999988 668
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccC-CCCCCCHHHHHHHHH
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFP-GGCLPSLSRITSAMA 214 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~p~~~~~~~~~~ 214 (288)
+||+|++..+++|+ .++..+++++.++|+|||.+++.+...+..... ............+ .....+..++.+.+.
T Consensus 87 ~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 162 (239)
T 1xxl_A 87 SFDIITCRYAAHHF--SDVRKAVREVARVLKQDGRFLLVDHYAPEDPVL--DEFVNHLNRLRDPSHVRESSLSEWQAMFS 162 (239)
T ss_dssp CEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHH--HHHHHHHHHHHCTTCCCCCBHHHHHHHHH
T ss_pred cEEEEEECCchhhc--cCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhH--HHHHHHHHHhccccccCCCCHHHHHHHHH
Confidence 99999999999999 678999999999999999999987765443111 0001111111111 123456777777766
Q ss_pred HcCCh
Q 048309 215 AASSL 219 (288)
Q Consensus 215 ~~~~~ 219 (288)
++ ||
T Consensus 163 ~a-Gf 166 (239)
T 1xxl_A 163 AN-QL 166 (239)
T ss_dssp HT-TE
T ss_pred HC-CC
Confidence 65 44
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.79 E-value=1.8e-18 Score=144.29 Aligned_cols=133 Identities=17% Similarity=0.196 Sum_probs=112.0
Q ss_pred hHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 048309 31 LAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEM 110 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~ 110 (288)
....|+..+..|+..... ...+..++..+ .++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++
T Consensus 13 ~~~~~~~~~~~y~~~~~~------~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~ 83 (211)
T 3e23_A 13 TLRFYRGNATAYAERQPR------SATLTKFLGEL--PAGAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASR 83 (211)
T ss_dssp HHHHHHHSHHHHTTCCCC------CHHHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccch------hHHHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHH
Confidence 456788888888876332 34455555554 46789999999999999999986 7799999999999999998
Q ss_pred HHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 111 KVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 111 ~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
++ +++++.+|+.+++.+++||+|++..+++|++.++...+++++.++|||||++++......
T Consensus 84 ~~-------~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 84 RL-------GRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp HH-------TSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred hc-------CCceEEeeeccCCCCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 86 367889999988877899999999999999877899999999999999999999865544
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=2.8e-19 Score=154.16 Aligned_cols=132 Identities=11% Similarity=0.118 Sum_probs=95.7
Q ss_pred HHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHH
Q 048309 32 AQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMK 111 (288)
Q Consensus 32 ~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~ 111 (288)
...|+..+..|+.... ..+++ .++.+.+... .+.+|||||||+|..+..+++. +.+|+|+|+|+.|++.|++.
T Consensus 8 ~d~F~~~a~~Y~~~Rp-~yp~~---l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 8 KDHFTPVADAYRAFRP-RYPRA---LFRWLGEVAP--ARGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp ------------CCCC-CCCHH---HHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHHCC-CcHHH---HHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc
Confidence 3457777888886522 22222 3344444433 4569999999999999999986 77999999999999877542
Q ss_pred HHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 112 VNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 112 ~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
.+++++++|+++++ ++++||+|++..++||++ ...+++++.++|||||+|++.....+.
T Consensus 81 -------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 81 -------PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp -------TTEEEEECCTTCCCCCSSCEEEEEECSCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred -------CCceeehhhhhhhcccCCcccEEEEeeehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 47999999999998 789999999999998873 578999999999999999998766543
No 27
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.78 E-value=3.1e-18 Score=141.09 Aligned_cols=118 Identities=17% Similarity=0.263 Sum_probs=103.7
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
.+++.+...++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.+++++...++ .+++++++|+.+++.+++||+
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~D~ 100 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENL-DNLHTRVVDLNNLTFDRQYDF 100 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTC-TTEEEEECCGGGCCCCCCEEE
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCC-CCcEEEEcchhhCCCCCCceE
Confidence 4455566667889999999999999999987 78999999999999999999988887 379999999998776689999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
|++..+++|+++++...+++++.++|+|||.+++.+...+
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDT 140 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCC
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeecc
Confidence 9999999999777899999999999999999888665443
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.78 E-value=2.9e-19 Score=148.10 Aligned_cols=139 Identities=12% Similarity=0.167 Sum_probs=108.8
Q ss_pred hHHHHHhhhhhcCCCCC--CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHH
Q 048309 31 LAQAHRNISYHYDLDED--EDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYA 108 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~~~--~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a 108 (288)
+...|+.++..|+.... ..........+..++.. .+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+
T Consensus 5 ~~~~y~~~a~~y~~~~~~~~~~~~~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a 79 (203)
T 3h2b_A 5 VSKAYSSPTFDAEALLGTVISAEDPDRVLIEPWATG----VDGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELA 79 (203)
T ss_dssp HHHHHHCTTTCHHHHTCSSCCTTCTTHHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHH
T ss_pred HHHHHhhHHHHHHHHhhhhccccHHHHHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHH
Confidence 44566666666643211 11111223334444443 2779999999999999999987 77999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 109 EMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 109 ~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+++. .+++++++|+.+++ ++++||+|++..+++|++.++...+++++.++|+|||.+++.++..+.
T Consensus 80 ~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 80 RQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp HHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred HHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 8872 37899999999988 678999999999999997778999999999999999999998876554
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.78 E-value=1.6e-18 Score=147.42 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=111.8
Q ss_pred HHhhhhhcCCCCC-CCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHH
Q 048309 35 HRNISYHYDLDED-EDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 35 ~~~~a~~Yd~~~~-~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~ 113 (288)
|+.++..||.... ........+.+..++... ..++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++..
T Consensus 3 y~~~a~~yd~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~ 80 (246)
T 1y8c_A 3 YNKFAHIYDKLIRADVDYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHHHHHTTCSCCHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccccHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHh
Confidence 6677777775432 223344444555555443 236789999999999999999886 7799999999999999999998
Q ss_pred HcCCCCceEEEEcccCCCCCCCCCCEEEEcc-chhhh-CHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 114 EAGLQDHIRLYLCDYRQLPKAKKYDRIISCE-MMEAV-GHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 114 ~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~-~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
..+. +++++++|+.+++..++||+|++.. +++|+ ++++...+++++.++|+|||.+++....
T Consensus 81 ~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 81 SQGL--KPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HTTC--CCEEECCCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred hcCC--CeEEEecccccCCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 8765 6999999999987448999999998 99999 4467899999999999999999986543
No 30
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=1.5e-18 Score=148.53 Aligned_cols=141 Identities=18% Similarity=0.279 Sum_probs=112.4
Q ss_pred HHHhhhhhcCCCCCCC--HHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHH
Q 048309 34 AHRNISYHYDLDEDED--LKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMK 111 (288)
Q Consensus 34 ~~~~~a~~Yd~~~~~~--l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~ 111 (288)
.|+.++.+||...... ........+..++......++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++
T Consensus 4 ~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~ 82 (252)
T 1wzn_A 4 LYTLLAEYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRK 82 (252)
T ss_dssp GGTTTGGGHHHHTHHHHHTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHH
Confidence 4667777777531100 01233445566777776677889999999999999999986 78999999999999999999
Q ss_pred HHHcCCCCceEEEEcccCCCCCCCCCCEEEEcc-chhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 112 VNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCE-MMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 112 ~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~-~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+...+. +++++++|+.+++..++||+|++.. .+++++.++...+++++.++|+|||.+++....
T Consensus 83 ~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 83 AKERNL--KIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHTTC--CCEEEESCGGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHhcCC--ceEEEECChhhcccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 988775 6999999999987557899999874 556666678899999999999999999986543
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.78 E-value=2.3e-18 Score=147.40 Aligned_cols=126 Identities=11% Similarity=0.169 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 50 LKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 50 l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
+..........+++.+...++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++... .+++++++|+.
T Consensus 74 ~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~ 150 (254)
T 1xtp_A 74 VHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASME 150 (254)
T ss_dssp GHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGG
T ss_pred cCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHH
Confidence 344555666778888877788999999999999999998864558999999999999999987654 47999999999
Q ss_pred CCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 130 QLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 130 ~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
+++ ++++||+|++..+++|++.++...+++++.++|+|||.+++.+...
T Consensus 151 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp GCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 887 6689999999999999987789999999999999999999987643
No 32
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.77 E-value=1.6e-18 Score=150.54 Aligned_cols=114 Identities=21% Similarity=0.410 Sum_probs=102.1
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYD 138 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD 138 (288)
+.....+.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.+++++...+++ +++++++|+.+++ ++++||
T Consensus 29 l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD 107 (276)
T 3mgg_A 29 LHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDSSFD 107 (276)
T ss_dssp HHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTTCEE
T ss_pred HhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCCCee
Confidence 334445678899999999999999999987 5789999999999999999999988884 7999999999988 678999
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+|++..+++|+ .+...+++++.++|||||++++.+..
T Consensus 108 ~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (276)
T 3mgg_A 108 HIFVCFVLEHL--QSPEEALKSLKKVLKPGGTITVIEGD 144 (276)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEechhhhc--CCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence 99999999999 67789999999999999999997754
No 33
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.77 E-value=1.1e-18 Score=148.12 Aligned_cols=121 Identities=16% Similarity=0.174 Sum_probs=103.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
.+..++.....++ .+|||||||+|.++..+++ .+.+|+|+|+|+.+++.|++++...+...+++++++|+.++++.++
T Consensus 55 ~l~~~~~~~~~~~-~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 132 (235)
T 3lcc_A 55 LIVHLVDTSSLPL-GRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL 132 (235)
T ss_dssp HHHHHHHTTCSCC-EEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSC
T ss_pred HHHHHHHhcCCCC-CCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCC
Confidence 3445565555544 4999999999999999987 4789999999999999999998775555679999999999886679
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
||+|++..+++|+++++...+++++.++|+|||.+++.++...
T Consensus 133 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 133 FDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp EEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred eeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 9999999999999777999999999999999999999776543
No 34
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.77 E-value=2e-18 Score=147.96 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=100.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
..+..+++.+...++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++.. ..+++++++|+.+++ ++
T Consensus 31 ~~~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 31 GEWHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCT
T ss_pred hhHHHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCC
Confidence 3445566777767889999999999999999998733399999999999999998865 257999999999988 67
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|++..+++|+ +++..+++++.++|||||.+++....
T Consensus 107 ~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 107 DAYNVVLSSLALHYI--ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp TCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEEchhhhhh--hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 899999999999999 78899999999999999999997543
No 35
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.77 E-value=5.2e-18 Score=149.24 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=97.7
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCceEEEEcccCCCC-CC---
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEA-GLQDHIRLYLCDYRQLP-KA--- 134 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~-g~~~~v~~~~~d~~~~~-~~--- 134 (288)
+..+...++.+|||||||+|..+..+++. ++.+|+|+|+|+.+++.|+++++.. +...+++++++|+.+++ ..
T Consensus 29 l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 108 (299)
T 3g5t_A 29 IDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADS 108 (299)
T ss_dssp HHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTT
T ss_pred HHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccccc
Confidence 33333457889999999999999999963 5789999999999999999999886 44468999999999987 54
Q ss_pred ---CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 ---KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ---~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|++..+++|+ ++..+++++.++|+|||.+++.++.
T Consensus 109 ~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 109 VDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp TTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 799999999999999 7789999999999999999995544
No 36
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.77 E-value=1.8e-18 Score=148.75 Aligned_cols=110 Identities=24% Similarity=0.241 Sum_probs=93.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH----------cC------CCCceEEEEcccCC
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNE----------AG------LQDHIRLYLCDYRQ 130 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~----------~g------~~~~v~~~~~d~~~ 130 (288)
..++.+|||+|||+|..+..|++. |.+|+|||+|+.+++.|+++... .+ ...+++++++|+.+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 457789999999999999999996 88999999999999999876531 00 11479999999999
Q ss_pred CC-C-CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 131 LP-K-AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 131 ~~-~-~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++ . .++||+|++..+++|+++++...+++++.++|||||++++.++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 88 3 38999999999999998788899999999999999999865544
No 37
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.77 E-value=1.9e-18 Score=146.96 Aligned_cols=141 Identities=16% Similarity=0.265 Sum_probs=99.5
Q ss_pred hHHHHHhhhhhcCCCCCCCHHHHHH-HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHH
Q 048309 31 LAQAHRNISYHYDLDEDEDLKVAQM-RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAE 109 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~~~~~l~~a~~-~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~ 109 (288)
....|+..+..|+............ ..+..+.+.+ .++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++
T Consensus 16 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~ 92 (242)
T 3l8d_A 16 AEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYV--KKEAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGK 92 (242)
T ss_dssp ----------------CHHHHTSTTTTHHHHHHHHS--CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHc--CCCCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHH
Confidence 4556666666666531111111111 2233344443 37789999999999999999997 789999999999999998
Q ss_pred HHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 110 MKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 110 ~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
++.. ..+++++++|+.+++ ++++||+|++..+++|+ .++..+++++.++|+|||.+++.+.....
T Consensus 93 ~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 93 ERGE----GPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT--EEPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp TTTC----BTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS--SCHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred hhcc----cCCceEEEcchhcCCCCCCCccEEEEcChHhhc--cCHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 7742 257999999999988 67899999999999999 78889999999999999999998866543
No 38
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=4.8e-18 Score=142.14 Aligned_cols=115 Identities=23% Similarity=0.247 Sum_probs=99.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYD 138 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD 138 (288)
..+...+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++... ++++++++|+.+++++++||
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~fD 116 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKRW---SHISWAATDILQFSTAELFD 116 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTTC---SSEEEEECCTTTCCCSCCEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcccC---CCeEEEEcchhhCCCCCCcc
Confidence 33444566677889999999999999999886 569999999999999999987654 37999999999988778999
Q ss_pred EEEEccchhhhC-HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 139 RIISCEMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 139 ~I~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+|++..+++|++ ++....+++++.++|+|||.+++.+..
T Consensus 117 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 117 LIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999999999995 355678899999999999999996653
No 39
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.77 E-value=1.1e-18 Score=150.67 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=102.6
Q ss_pred HHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHH
Q 048309 34 AHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 34 ~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~ 113 (288)
.|+.++..|+...... ......+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++.
T Consensus 4 ~y~~~a~~y~~~~~~~-----~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~- 76 (261)
T 3ege_A 4 IYNSIGKQYSQTRVPD-----IRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP- 76 (261)
T ss_dssp ---------CCSBCCC-----HHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT-
T ss_pred HHHHHHHHHhhccccc-----HHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc-
Confidence 5788899999763322 24566777888778899999999999999999998 5889999999999988776542
Q ss_pred HcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 114 EAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 114 ~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
+++++++|+.+++ ++++||+|++..+++|+ .++..+++++.++|| ||.+++.++..
T Consensus 77 ------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~ 133 (261)
T 3ege_A 77 ------QVEWFTGYAENLALPDKSVDGVISILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDI 133 (261)
T ss_dssp ------TEEEECCCTTSCCSCTTCBSEEEEESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECG
T ss_pred ------CCEEEECchhhCCCCCCCEeEEEEcchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCC
Confidence 7999999999988 67899999999999999 788999999999999 99888877653
No 40
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.76 E-value=7.2e-18 Score=147.60 Aligned_cols=111 Identities=17% Similarity=0.204 Sum_probs=98.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEcc
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCE 144 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~ 144 (288)
+.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|++++...++..+++++++|+.+.+ .+++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 467889999999999999998876445999999999999999999998877668999999999876 467999999999
Q ss_pred chhh--hCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 145 MMEA--VGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 145 ~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++| .+.++...+++++.++|+|||.+++.+..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 9988 34578899999999999999999997755
No 41
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=2.3e-18 Score=143.52 Aligned_cols=132 Identities=15% Similarity=0.173 Sum_probs=104.8
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHH
Q 048309 35 HRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 35 ~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~ 113 (288)
|+.++..||............+....++..+.. ++.+|||+|||+|.++..+ +. +++|+|+|+.+++.++++.
T Consensus 3 fd~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~- 76 (211)
T 2gs9_A 3 FASLAEAYEAWYGTPLGAYVIAEEERALKGLLP-PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA- 76 (211)
T ss_dssp TTTTTTTTTGGGGSHHHHHHHHHHHHHHHTTCC-CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHhcccchhhhHHHHHHHHHHhcC-CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-
Confidence 566777777642222222212334455655544 7889999999999998877 45 9999999999999998875
Q ss_pred HcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 114 EAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 114 ~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
.+++++++|+.+++ ++++||+|++..+++|+ .++..+++++.++|||||.+++.+....
T Consensus 77 -----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 77 -----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV--EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp -----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC--SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc--CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 36899999999988 67899999999999999 6789999999999999999999887644
No 42
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.76 E-value=6.5e-18 Score=143.83 Aligned_cols=134 Identities=19% Similarity=0.305 Sum_probs=106.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC--C-CCCCCCEEEEc
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL--P-KAKKYDRIISC 143 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~-~~~~fD~I~~~ 143 (288)
++++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++++ ++++.+|+.+. + ++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 356789999999999999999886 77999999999999988764 68899998875 4 56899999999
Q ss_pred cchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCC-CCCCHHHHHHHHHHcCCh
Q 048309 144 EMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGG-CLPSLSRITSAMAAASSL 219 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~ 219 (288)
.+++|++.++...+++++.++|||||.+++.+...... ..+...+..+.. ...+..++.+.+.++ ||
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~l~~a-Gf 176 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL--------YSLINFYIDPTHKKPVHPETLKFILEYL-GF 176 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH--------HHHHHHTTSTTCCSCCCHHHHHHHHHHH-TC
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh--------HHHHHHhcCccccccCCHHHHHHHHHHC-CC
Confidence 99999976788999999999999999999987764321 122333444433 456777777777665 44
No 43
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=2.1e-18 Score=146.75 Aligned_cols=133 Identities=16% Similarity=0.221 Sum_probs=97.7
Q ss_pred HHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHH
Q 048309 33 QAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMK 111 (288)
Q Consensus 33 ~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~ 111 (288)
..|+..+..|+.. .... .....+++.+. ..++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++
T Consensus 11 ~~~~~~~~~~~~~---~~~~---~~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~ 83 (250)
T 2p7i_A 11 EIKDTAGHKYAYN---FDFD---VMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGR 83 (250)
T ss_dssp ------------C---HHHH---THHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHH
T ss_pred HHHhhHHHHhcCc---cchh---hHHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHh
Confidence 4455556666532 1112 22233333332 246779999999999999999886 56899999999999999987
Q ss_pred HHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHh-cccccCcEEEEEeecCC
Q 048309 112 VNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCE-SLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 112 ~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~ 179 (288)
... +++++++|+.++.++++||+|++..+++|+ .++..+++++. ++|||||.+++.+....
T Consensus 84 ~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 84 LKD-----GITYIHSRFEDAQLPRRYDNIVLTHVLEHI--DDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp SCS-----CEEEEESCGGGCCCSSCEEEEEEESCGGGC--SSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred hhC-----CeEEEEccHHHcCcCCcccEEEEhhHHHhh--cCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 532 699999999988767899999999999999 67899999999 99999999999876544
No 44
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.76 E-value=3.1e-18 Score=147.32 Aligned_cols=135 Identities=17% Similarity=0.250 Sum_probs=105.9
Q ss_pred HHHhhhhhcCCCCCCCHHHHHHHHHHHHHH-HcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHH
Q 048309 34 AHRNISYHYDLDEDEDLKVAQMRKHSLLIE-KARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKV 112 (288)
Q Consensus 34 ~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~-~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~ 112 (288)
.|+.++..|+...... ..........+.+ ...+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++
T Consensus 4 ~~~~~a~~y~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 4 ALLRAAYAYDRLRAHP-PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp HHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT
T ss_pred chHHHHHHHhhhcccC-hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh
Confidence 4566666666532111 1122223333333 225567889999999999999999986 789999999999999999987
Q ss_pred HHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 113 NEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 113 ~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+ ..+++++++|+.+++ ++++||+|++..+++|+ .+...+++++.++|+|||.+++.
T Consensus 82 -~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 82 -AGV-DRKVQVVQADARAIPLPDESVHGVIVVHLWHLV--PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -TTS-CTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC--TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hcc-CCceEEEEcccccCCCCCCCeeEEEECCchhhc--CCHHHHHHHHHHHCCCCcEEEEE
Confidence 222 358999999999988 67899999999999999 67899999999999999999987
No 45
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.76 E-value=6e-18 Score=144.15 Aligned_cols=111 Identities=14% Similarity=0.288 Sum_probs=96.8
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchh
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMME 147 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~ 147 (288)
++.+|||||||+|.++..+++....+|+|+|+|+.+++.+++++...+. .+++++++|+.+++ .+++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 5789999999999999998876556999999999999999999876542 46899999999887 556899999999999
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|++.+....+++++.++|+|||++++.+...+.
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 190 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE 190 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC
Confidence 997666779999999999999999998766443
No 46
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.76 E-value=7.7e-18 Score=147.08 Aligned_cols=108 Identities=17% Similarity=0.244 Sum_probs=98.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ +++++++|+.+.+..++||+|++..+++
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVFM 195 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSGG
T ss_pred cCCCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccchh
Confidence 47889999999999999999987 77999999999999999999998886 7999999999987678999999999999
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
|++++....+++++.++|+|||.+++.+...
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 9988888999999999999999988765543
No 47
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.75 E-value=5.3e-18 Score=149.71 Aligned_cols=115 Identities=21% Similarity=0.255 Sum_probs=100.1
Q ss_pred CCCCCCEEEEECCcccHHHHHHH--HccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEc
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVV--RQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISC 143 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la--~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~ 143 (288)
.+.++.+|||||||+|..+..++ ..++.+|+|+|+|+.+++.|++++...++..+++++++|+.+++.+++||+|++.
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 45688999999999999999985 3367899999999999999999999888877799999999998844999999999
Q ss_pred cchhhhC-HhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 144 EMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 144 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
.+++|++ +.....+++++.++|||||.+++.++..+.
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 9999993 444456899999999999999998876543
No 48
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=6.7e-18 Score=144.96 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=107.8
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCC
Q 048309 39 SYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGL 117 (288)
Q Consensus 39 a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~ 117 (288)
+..|+.... .+.+....+++.+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++.
T Consensus 8 ~~~y~~~~~-----~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----- 77 (259)
T 2p35_A 8 AQQYLKFED-----ERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----- 77 (259)
T ss_dssp CGGGBCCCC-----GGGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----
T ss_pred HHHHHHHHH-----HHHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----
Confidence 456665422 23445567888888888899999999999999999987 5789999999999999998871
Q ss_pred CCceEEEEcccCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 118 QDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 118 ~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.+++++++|+.+++++++||+|++..+++|+ .++..+++++.++|+|||.+++.+...
T Consensus 78 -~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 78 -PNTNFGKADLATWKPAQKADLLYANAVFQWV--PDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp -TTSEEEECCTTTCCCSSCEEEEEEESCGGGS--TTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred -CCcEEEECChhhcCccCCcCEEEEeCchhhC--CCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 4789999999988766899999999999999 788999999999999999999987653
No 49
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.75 E-value=1.4e-17 Score=145.09 Aligned_cols=117 Identities=9% Similarity=0.117 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHH-HHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAI-EVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ 130 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~-~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 130 (288)
+.....+..-...+.++++.+|||||||+|.++. .+++.++++|+|+|+|+++++.|+++++..|+ .+++++++|+.+
T Consensus 105 ~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~ 183 (298)
T 3fpf_A 105 PRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETV 183 (298)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGG
T ss_pred ccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhh
Confidence 3444455555567788999999999999987664 44554789999999999999999999999998 799999999998
Q ss_pred CCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 131 LPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 131 ~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++ +++||+|++... . ++..++++++.++|||||++++..
T Consensus 184 l~-d~~FDvV~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 184 ID-GLEFDVLMVAAL---A--EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp GG-GCCCSEEEECTT---C--SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CC-CCCcCEEEECCC---c--cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 86 689999998654 3 677899999999999999999865
No 50
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.75 E-value=8.4e-18 Score=137.33 Aligned_cols=110 Identities=12% Similarity=0.079 Sum_probs=90.9
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEc
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISC 143 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~ 143 (288)
.+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++ +++++++.|...++ .+++||+|++.
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 4567899999999999999999987 88999999999999999999999888 68999998888753 46789999987
Q ss_pred c-chhhh------CHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 144 E-MMEAV------GHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 144 ~-~l~~~------~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
. .+.+. .......+++++.++|||||.+++..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3 33220 2256678899999999999999997654
No 51
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=1.1e-17 Score=138.90 Aligned_cols=112 Identities=23% Similarity=0.297 Sum_probs=97.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
.++.+|||+|||+|..+..++...+.+|+|+|+|+.+++.+++++...+ .+++++++|+.+++ ++++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcChH
Confidence 4678999999999998444433457899999999999999999988766 36899999999988 67899999999999
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
+|++.++...+++++.++|+|||.+++.++..+..
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDE 134 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTST
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccch
Confidence 99987889999999999999999999998876543
No 52
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.75 E-value=1.2e-17 Score=143.95 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=111.7
Q ss_pred hhhcCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHH
Q 048309 25 ISRKNSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQ 104 (288)
Q Consensus 25 ~~~~~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~ 104 (288)
-.....+...++.++..||.......-......+..++..... ++.+|||||||+|.++..+++. +.+|+|+|+|+.+
T Consensus 11 ~~~~~~~~~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~ 88 (260)
T 2avn_A 11 HHMKLRSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLK-NPCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEM 88 (260)
T ss_dssp -CEECCHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCC-SCCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHH
T ss_pred hhhhhhhcchhhHHHHHHHHhccccchhHHHHHHHHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHH
Confidence 3455677889999999999764222112233344455554433 7789999999999999999986 7899999999999
Q ss_pred HHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 105 MKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 105 ~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++.++++.. . .++++|+.+++ ++++||+|++..++.|+. .++..+++++.++|+|||.+++.+.+
T Consensus 89 l~~a~~~~~-----~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 89 LEVAREKGV-----K--NVVEAKAEDLPFPSGAFEAVLALGDVLSYV-ENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp HHHHHHHTC-----S--CEEECCTTSCCSCTTCEEEEEECSSHHHHC-SCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred HHHHHhhcC-----C--CEEECcHHHCCCCCCCEEEEEEcchhhhcc-ccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 999988743 1 28899999888 678999999998888774 34899999999999999999997765
No 53
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=2.9e-18 Score=147.91 Aligned_cols=106 Identities=16% Similarity=0.264 Sum_probs=92.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEcc-ch
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCE-MM 146 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~-~l 146 (288)
.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++.. +++++++|+.+++.+++||+|++.. ++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~v~~~~~~l 121 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSAVTCMFSSI 121 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEEEEECTTGG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCEEEEcCchh
Confidence 35689999999999999999886 6799999999999999998742 6899999999988678999999998 99
Q ss_pred hhhC-HhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 147 EAVG-HEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 147 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+|++ +++...+++++.++|+|||.+++.++..+.
T Consensus 122 ~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 156 (263)
T 3pfg_A 122 GHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPE 156 (263)
T ss_dssp GGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred hhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChh
Confidence 9994 357889999999999999999997654443
No 54
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.74 E-value=3.9e-17 Score=145.72 Aligned_cols=122 Identities=14% Similarity=0.202 Sum_probs=107.2
Q ss_pred HHHHHHHcCC--CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCC
Q 048309 58 HSLLIEKARV--SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKA 134 (288)
Q Consensus 58 ~~~l~~~~~~--~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 134 (288)
...+++.+.. .++.+|||+|||+|..+..+++. ++.+++++|++ .+++.+++++...++.++++++.+|+.+.+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 230 (335)
T 2r3s_A 152 AQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG 230 (335)
T ss_dssp HHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC
T ss_pred HHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC
Confidence 3466777776 77889999999999999999987 67899999999 99999999999888877899999999886644
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+.||+|++..+++|++.++...+++++.+.|+|||++++.+...+.
T Consensus 231 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred CCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 4599999999999998778899999999999999999998876554
No 55
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=3.9e-17 Score=137.28 Aligned_cols=116 Identities=20% Similarity=0.394 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAK 135 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~ 135 (288)
....+++.+. ++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++....+ .+++++++|+.+++ +++
T Consensus 28 ~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~ 102 (227)
T 1ve3_A 28 LEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDK 102 (227)
T ss_dssp HHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTT
T ss_pred HHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCC
Confidence 3344444443 4789999999999999999886 5599999999999999999988776 47999999999987 667
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+||+|++..++++....+...+++++.++|+|||.+++.+..
T Consensus 103 ~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 103 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 999999999955554478899999999999999999997765
No 56
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.74 E-value=1.5e-16 Score=144.20 Aligned_cols=122 Identities=13% Similarity=0.122 Sum_probs=107.2
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
...+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+..+ .+
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p-~~ 268 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIP-DG 268 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCC-SS
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCC-CC
Confidence 456777777778899999999999999999987 7789999999 99999999999998887899999999983223 38
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
||+|++..++++++++....+++++++.|+|||++++.+...+..
T Consensus 269 ~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~ 313 (369)
T 3gwz_A 269 ADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDER 313 (369)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSS
T ss_pred ceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 999999999999977667799999999999999999988776653
No 57
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.74 E-value=1.2e-17 Score=152.02 Aligned_cols=111 Identities=18% Similarity=0.185 Sum_probs=97.4
Q ss_pred CCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-----C-C-CCceEEEEcccCCC------
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEA-----G-L-QDHIRLYLCDYRQL------ 131 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~-----g-~-~~~v~~~~~d~~~~------ 131 (288)
..++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++.. | + ..+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999886 4679999999999999999988754 3 2 24899999999986
Q ss_pred C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 132 P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 132 ~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+ ++++||+|++..+++|+ .++..+++++.++|||||.+++.++...
T Consensus 161 ~~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~ 207 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS--TNKLALFKEIHRVLRDGGELYFSDVYAD 207 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred CCCCCCEEEEEEccchhcC--CCHHHHHHHHHHHcCCCCEEEEEEeccc
Confidence 6 66899999999999999 6789999999999999999999876644
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.74 E-value=3.7e-18 Score=145.07 Aligned_cols=112 Identities=20% Similarity=0.274 Sum_probs=98.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKK 136 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~ 136 (288)
..+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++... .+++++++|+.+++ ++++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~ 107 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDS 107 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTC
T ss_pred HHHHHhccccCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCC
Confidence 34666677678899999999999999999987 55 999999999999999887543 36899999999887 6789
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
||+|++..+++|+ .+...+++++.++|+|||++++.+..
T Consensus 108 fD~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 108 FDLAYSSLALHYV--EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ceEEEEecccccc--chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 9999999999999 67899999999999999999997643
No 59
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.74 E-value=2.6e-17 Score=148.03 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=107.9
Q ss_pred HHHHHcCCCC-CCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCC
Q 048309 60 LLIEKARVSK-EHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAK 135 (288)
Q Consensus 60 ~l~~~~~~~~-~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~ 135 (288)
.+++.++..+ +.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+.+ .++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 5667776666 889999999999999999987 6789999999 8899999999998888778999999999876 667
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
+||+|++..+++|+++++...+++++.+.|+|||++++.+...+..
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDD 293 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 8999999999999987778999999999999999999988776553
No 60
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.74 E-value=4.8e-17 Score=147.11 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=102.9
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC--CCCCCCC
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL--PKAKKYD 138 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~~~~fD 138 (288)
+..+....+.+|||||||+|.++..+++. ++.+++++|+ +.+++.|+++++..++.++++++.+|+.+. +.+++||
T Consensus 172 l~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D 250 (363)
T 3dp7_A 172 LEIVFSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFD 250 (363)
T ss_dssp HHHHGGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCS
T ss_pred HHHhcccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcC
Confidence 33333345679999999999999999987 7889999999 999999999998888777899999999986 3337899
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
+|++..+++++++++...+++++++.|+|||++++.+...+..
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQ 293 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSC
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCc
Confidence 9999999999987788899999999999999999988765543
No 61
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.74 E-value=2.2e-17 Score=144.31 Aligned_cols=117 Identities=18% Similarity=0.277 Sum_probs=101.8
Q ss_pred HHHHHHHHc-CCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC
Q 048309 57 KHSLLIEKA-RVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK 133 (288)
Q Consensus 57 ~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 133 (288)
.+..+++.+ ...++.+|||||||+|.++..+++. + +.+|+|+|+|+.+++.+++++...+. +++++++|+.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~ 86 (284)
T 3gu3_A 9 YVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL 86 (284)
T ss_dssp HHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC
T ss_pred HHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc
Confidence 344455554 4567899999999999999999987 4 47999999999999999999887664 79999999999886
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++||+|++..+++|+ .+...+++++.++|||||.+++.+..
T Consensus 87 ~~~fD~v~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHM--TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SSCEEEEEEESCGGGC--SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCeeEEEECChhhcC--CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 6799999999999999 67889999999999999999987654
No 62
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=7.2e-17 Score=132.42 Aligned_cols=109 Identities=10% Similarity=0.112 Sum_probs=94.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCCCCEEEEcc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKKYDRIISCE 144 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~fD~I~~~~ 144 (288)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++++..++ ++++++++|+.++. ..++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 47889999999999999988876555899999999999999999999888 68999999998864 368999999998
Q ss_pred chhhhCHhhHHHHHHHHhc--ccccCcEEEEEeecC
Q 048309 145 MMEAVGHEYMEEYFGCCES--LLAKDGLLVLQFSST 178 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 178 (288)
.+++. .++...+++.+.+ +|+|||.+++.....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 87663 2578889999998 999999999987653
No 63
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.73 E-value=3.8e-17 Score=132.24 Aligned_cols=114 Identities=20% Similarity=0.187 Sum_probs=96.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CC-C
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LP-K 133 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~-~ 133 (288)
....+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|+++++..+++.++ ++.+|..+ ++ .
T Consensus 13 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 13 VRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 3456777788888999999999999999999987 5789999999999999999999998886688 88888855 33 2
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
.++||+|++..+++| ..+++++.++|+|||.+++.+..
T Consensus 92 ~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEECS
T ss_pred CCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEeec
Confidence 389999999988876 57889999999999999986643
No 64
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=9.4e-17 Score=133.65 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=96.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~~~~~f 137 (288)
..+++.+.+.++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.|+++++..+++++++++++|+.+ ++...+|
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCC
T ss_pred HHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCC
Confidence 35677778888999999999999999999997 889999999999999999999999986689999999998 4444689
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
|+|++...+ +.. +++++.++|+|||++++...
T Consensus 124 D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 124 EAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp SEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred CEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 999987643 345 99999999999999998654
No 65
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.73 E-value=1.8e-17 Score=144.26 Aligned_cols=112 Identities=21% Similarity=0.330 Sum_probs=99.4
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYD 138 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD 138 (288)
..+++.+...++.+|||||||+|.++..+++ ++.+|+|+|+|+.+++.++++. .+++++++|+.+++.+++||
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD 119 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLD 119 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEE
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcC
Confidence 4566777777889999999999999999998 5889999999999999998774 36899999999988668999
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+|++..+++|+ .++..+++++.++|||||.+++.+....
T Consensus 120 ~v~~~~~l~~~--~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 120 AVFSNAMLHWV--KEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp EEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEEEcchhhhC--cCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 99999999999 6788999999999999999999876543
No 66
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=2.3e-17 Score=140.20 Aligned_cols=134 Identities=22% Similarity=0.353 Sum_probs=105.8
Q ss_pred HHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHH
Q 048309 34 AHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 34 ~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~ 113 (288)
.|+.++..||........ ......+++.+. ++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|+++..
T Consensus 3 ~y~~~a~~yd~~~~~~~~---~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~ 75 (243)
T 3d2l_A 3 AYEQFAYVYDELMQDVPY---PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAM 75 (243)
T ss_dssp ---CTTHHHHHHTTTCCH---HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhcccH---HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhh
Confidence 366677777753222211 234445555544 5689999999999999999875 799999999999999999988
Q ss_pred HcCCCCceEEEEcccCCCCCCCCCCEEEEcc-chhhh-CHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 114 EAGLQDHIRLYLCDYRQLPKAKKYDRIISCE-MMEAV-GHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 114 ~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~-~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
..+ .+++++++|+.+++..++||+|++.. +++|+ +.++...+++++.++|+|||.+++...
T Consensus 76 ~~~--~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 76 ETN--RHVDFWVQDMRELELPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HTT--CCCEEEECCGGGCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC--CceEEEEcChhhcCCCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 766 36999999999887558999999986 89998 556788999999999999999998654
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.73 E-value=1.1e-17 Score=147.02 Aligned_cols=122 Identities=15% Similarity=0.255 Sum_probs=103.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC--CceEEEEcccCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ--DHIRLYLCDYRQLPK 133 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~~~ 133 (288)
..+..+++.+...++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.|++++...++. .+++++++|+.+++.
T Consensus 70 ~~~~~~~~~~~~~~~-~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 70 SEAREFATRTGPVSG-PVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHHHHCCCCS-CEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHHHHhhCCCCC-cEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 445566666665444 9999999999999999986 789999999999999999999876532 479999999999887
Q ss_pred CCCCCEEEEc-cchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 134 AKKYDRIISC-EMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 134 ~~~fD~I~~~-~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+++||+|++. .+++|+++++...+++++.++|+|||++++.+....
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 7899999865 667777777889999999999999999999887654
No 68
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.73 E-value=1e-16 Score=143.12 Aligned_cols=118 Identities=11% Similarity=0.134 Sum_probs=101.8
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
+++.+...++.+|||||||+|..+..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+..+ .+||+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p-~~~D~ 238 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLP-AGAGG 238 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCC-CSCSE
T ss_pred HHHhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCC-CCCcE
Confidence 334445556789999999999999999987 7789999999 99999999999998887899999999973223 38999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|++..+++|++++...++++++++.|+|||++++.+...+.
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 99999999998777899999999999999999998876654
No 69
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.73 E-value=6.1e-18 Score=148.54 Aligned_cols=107 Identities=18% Similarity=0.364 Sum_probs=91.0
Q ss_pred CCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC-------------------------------
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAG------------------------------- 116 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g------------------------------- 116 (288)
++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999999997 56899999999999999998876543
Q ss_pred --------------------------CCCceEEEEcccCCCC------CCCCCCEEEEccchhhh----CHhhHHHHHHH
Q 048309 117 --------------------------LQDHIRLYLCDYRQLP------KAKKYDRIISCEMMEAV----GHEYMEEYFGC 160 (288)
Q Consensus 117 --------------------------~~~~v~~~~~d~~~~~------~~~~fD~I~~~~~l~~~----~~~~~~~~l~~ 160 (288)
++.+++++++|+.... ..++||+|+|..+++|+ +.+.+..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 2258999999998654 46899999999999887 45588999999
Q ss_pred HhcccccCcEEEEEe
Q 048309 161 CESLLAKDGLLVLQF 175 (288)
Q Consensus 161 ~~~~LkpgG~l~~~~ 175 (288)
++++|+|||+|++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999853
No 70
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=1.6e-18 Score=147.64 Aligned_cols=139 Identities=17% Similarity=0.072 Sum_probs=104.4
Q ss_pred ChHHHHHhhhhhcCCCCCCCHH-------HH-HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCC
Q 048309 30 SLAQAHRNISYHYDLDEDEDLK-------VA-QMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLS 101 (288)
Q Consensus 30 ~~~~~~~~~a~~Yd~~~~~~l~-------~a-~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s 101 (288)
.....|...+..||.... .+. .. ....+..+.+.+ ..+|.+|||||||+|..+..+++..+.+++|||+|
T Consensus 15 ~~~~~w~~~~~~yd~~~~-~l~~~g~~vm~~we~~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~ 92 (236)
T 3orh_A 15 NCSPAWGAAPAAYDAADT-HLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECN 92 (236)
T ss_dssp BCHHHHTTSCEEECTTSS-EEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECC
T ss_pred hhhhhHhcCcCCCCcchh-hhhhcCHHHHHHHHHHHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCC
Confidence 345677887888886521 100 01 112233344433 35788999999999999999988745689999999
Q ss_pred HHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCCCCEEEEc-----cchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 102 AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKKYDRIISC-----EMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 102 ~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~fD~I~~~-----~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
+.+++.|+++.+..+. +++++.+|+.+.. ++++||.|++. ..++|+ .+...+++++.++|||||+|++
T Consensus 93 ~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 93 DGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp HHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEEeeeecccchhhh--cchhhhhhhhhheeCCCCEEEE
Confidence 9999999999887764 7899999987643 56889999863 445666 7889999999999999999987
Q ss_pred E
Q 048309 174 Q 174 (288)
Q Consensus 174 ~ 174 (288)
.
T Consensus 169 ~ 169 (236)
T 3orh_A 169 C 169 (236)
T ss_dssp C
T ss_pred E
Confidence 3
No 71
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.72 E-value=1.5e-16 Score=132.04 Aligned_cols=113 Identities=14% Similarity=0.190 Sum_probs=98.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAK 135 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~ 135 (288)
...++..+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++++..++ ++++++.+|+.+.. ..+
T Consensus 29 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 29 RAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSC
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCC
Confidence 356778888889999999999999999999987 458999999999999999999998888 68999999997654 447
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|++..+++ +...+++++.++|+|||++++...
T Consensus 108 ~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 108 DPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp CCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 899999987765 457899999999999999998553
No 72
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.72 E-value=1.2e-17 Score=140.51 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=88.8
Q ss_pred CCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----CCCCCCCEEEEc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----PKAKKYDRIISC 143 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~~~~~fD~I~~~ 143 (288)
++.+|||||||+|..+..+++. ++..|+|||+|+.+++.|+++++..+++ |++++++|+.++ .++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5679999999999999999987 6789999999999999999999998884 799999999874 256899999998
Q ss_pred cchhhhCHhhH------HHHHHHHhcccccCcEEEEEe
Q 048309 144 EMMEAVGHEYM------EEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 144 ~~l~~~~~~~~------~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+...+...... ..+++++.++|||||.+++.+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 55433211111 369999999999999999865
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=1.8e-18 Score=147.03 Aligned_cols=149 Identities=15% Similarity=0.053 Sum_probs=108.5
Q ss_pred hhhcCChHHHHHhhhhhcCCCCCC-------CHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEE
Q 048309 25 ISRKNSLAQAHRNISYHYDLDEDE-------DLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTG 97 (288)
Q Consensus 25 ~~~~~~~~~~~~~~a~~Yd~~~~~-------~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~g 97 (288)
....+.....|...+..||..+.. .+..-....+..+...+ ..++.+|||||||+|.++..+++....+|+|
T Consensus 10 ~~~~~~~~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~g 88 (236)
T 1zx0_A 10 FAPGENCSPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAPIDEHWI 88 (236)
T ss_dssp SCTTCBCHHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSCEEEEEE
T ss_pred cCCcCCCchhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcCCCeEEE
Confidence 344556678888888899954210 01111112223333333 4578899999999999999997753448999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC--C-CCCCCCEEEE-ccch--hhhCHhhHHHHHHHHhcccccCcEE
Q 048309 98 ITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL--P-KAKKYDRIIS-CEMM--EAVGHEYMEEYFGCCESLLAKDGLL 171 (288)
Q Consensus 98 iD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~-~~~~fD~I~~-~~~l--~~~~~~~~~~~l~~~~~~LkpgG~l 171 (288)
+|+|+.|++.|+++.+..+ .+++++++|+.++ + ++++||+|++ .+.+ +......+..+++++.++|||||++
T Consensus 89 vD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l 166 (236)
T 1zx0_A 89 IECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp EECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEE
Confidence 9999999999999887766 4799999999887 5 5689999999 4443 2222356678899999999999999
Q ss_pred EEEee
Q 048309 172 VLQFS 176 (288)
Q Consensus 172 ~~~~~ 176 (288)
++.+.
T Consensus 167 ~~~~~ 171 (236)
T 1zx0_A 167 TYCNL 171 (236)
T ss_dssp EECCH
T ss_pred EEEec
Confidence 98543
No 74
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.72 E-value=4.1e-17 Score=137.32 Aligned_cols=139 Identities=18% Similarity=0.196 Sum_probs=108.3
Q ss_pred hHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHH
Q 048309 31 LAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYA 108 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a 108 (288)
+-..++.++..++.. ..+.....+.+..++.. .++.+|||||||+|..+..+++. .+.+|+++|+++.+++.|
T Consensus 25 v~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a 99 (221)
T 3u81_A 25 VLEAIDTYCTQKEWA--MNVGDAKGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAIT 99 (221)
T ss_dssp HHHHHHHHHHHHTCG--GGCCHHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHH
T ss_pred HHHHHHHHhhhcCcC--cccCHHHHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHH
Confidence 445666666666643 23334445555555554 35679999999999999999985 378999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcccCCC-C-CC-----CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 109 EMKVNEAGLQDHIRLYLCDYRQL-P-KA-----KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 109 ~~~~~~~g~~~~v~~~~~d~~~~-~-~~-----~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++++..++.++++++++|+.+. + .. ++||+|++....++. .....+++.+ ++|+|||++++.+..
T Consensus 100 ~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 100 QQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp HHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 99999999877899999998653 2 22 689999999888777 5666788888 999999999986554
No 75
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.72 E-value=1.2e-16 Score=130.68 Aligned_cols=119 Identities=23% Similarity=0.415 Sum_probs=102.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-ceEEEEcccCCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQD-HIRLYLCDYRQLPKAK 135 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~-~v~~~~~d~~~~~~~~ 135 (288)
....+++.+...++.+|||+|||+|.++..+++. +.+++|+|+++.+++.+++++...+++. +++++.+|+.+....+
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 118 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDR 118 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTS
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccC
Confidence 3456677777778899999999999999999987 8899999999999999999999888743 3999999998865667
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+||+|++..++++. ......+++++.++|+|||.+++.+..
T Consensus 119 ~~D~v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 119 KYNKIITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp CEEEEEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CceEEEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 99999999887762 267889999999999999999997664
No 76
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.72 E-value=1.1e-17 Score=148.59 Aligned_cols=150 Identities=16% Similarity=0.154 Sum_probs=118.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.....+++.+.+.++.+|||||||+|.++..+++. . ..+|+|+|+|+++++.|+++++..+++ +++++.+|+.+..
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~ 140 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP 140 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc
Confidence 56778888888889999999999999999999987 3 357999999999999999999998885 6999999998855
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC--Ccccccc-cCchhhHhhhccCCCCCCCHHHH
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP--DARYNEY-RLSSDFIKEYIFPGGCLPSLSRI 209 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--~~~~~~~-~~~~~~~~~~i~~~~~~p~~~~~ 209 (288)
..++||+|++..+++|++ +++.+.|||||++++...... ......+ +....|..++++|+..+|....+
T Consensus 141 ~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 212 (317)
T 1dl5_A 141 EFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINLKLSRRQPAFLFKKKDPYLVGNYKLETRFITAGGNL 212 (317)
T ss_dssp GGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCBGGGTBCEEEEEEEETTEEEEEEEEECCCCBCCGGG
T ss_pred cCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECCCCcccceEEEEEEeCCcEEEEEeccEEEEEccCcc
Confidence 567899999999999984 467789999999999865432 1222222 11235677888888888876554
Q ss_pred HHHHH
Q 048309 210 TSAMA 214 (288)
Q Consensus 210 ~~~~~ 214 (288)
...++
T Consensus 213 ~~~~~ 217 (317)
T 1dl5_A 213 GNLLE 217 (317)
T ss_dssp SCHHH
T ss_pred ccccc
Confidence 43333
No 77
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.71 E-value=7.7e-17 Score=135.88 Aligned_cols=141 Identities=15% Similarity=0.155 Sum_probs=109.9
Q ss_pred cCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHH
Q 048309 28 KNSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQM 105 (288)
Q Consensus 28 ~~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~ 105 (288)
.+..-......+...... .+...+.+.+..++...+.+++.+|||||||+|..+..+++. ++.+|+++|+++.++
T Consensus 18 ~~~~l~~~~~~a~~~~~p---~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~ 94 (221)
T 3dr5_A 18 TDAAVARAREDAAEFGLP---APDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQ 94 (221)
T ss_dssp CCHHHHHHHHHHHHTTCC---CCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHH
T ss_pred CCHHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHH
Confidence 344434444444444332 344566677777887776666679999999999999999986 368999999999999
Q ss_pred HHHHHHHHHcCCC-CceEEEEcccCCCC---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 106 KYAEMKVNEAGLQ-DHIRLYLCDYRQLP---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 106 ~~a~~~~~~~g~~-~~v~~~~~d~~~~~---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+.|+++++..|+. ++++++++|+.+.. .+++||+|++.... .+...+++++.++|+|||++++.+.
T Consensus 95 ~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 95 RQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred HHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 9999999999986 68999999987753 26899999987643 3457799999999999999998443
No 78
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.71 E-value=3.6e-17 Score=134.87 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=95.5
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCE
Q 048309 64 KARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDR 139 (288)
Q Consensus 64 ~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~ 139 (288)
...++++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++++..++..+++++++|+.+++ .+++||+
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 334568889999999999999999987 456999999999999999999999888678999999998875 5589999
Q ss_pred EEEccchhh-------hCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 140 IISCEMMEA-------VGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 140 I~~~~~l~~-------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|++...+.. ....+...+++++.++|+|||++++..+.
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 999875511 12245678999999999999999997654
No 79
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.71 E-value=2.7e-17 Score=136.96 Aligned_cols=112 Identities=18% Similarity=0.137 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
.....+++.+...++.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++++..+++ +++++.+|+.+.. ..
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 141 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQAR 141 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccC
Confidence 45566778888889999999999999999999987 789999999999999999999998885 8999999998866 56
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|++..+++|++. .+.+.|+|||++++....
T Consensus 142 ~~~D~i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred CCccEEEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 89999999999999852 478999999999997665
No 80
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.71 E-value=1.7e-17 Score=140.68 Aligned_cols=116 Identities=17% Similarity=0.283 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
.+..++.... .++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. .+++++++|+.+++.+++
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~ 100 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKE-FGDTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRLGRK 100 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHH-HSEEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCCSSC
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHcccCCC
Confidence 3334444433 56789999999999999999987 449999999999999998874 368999999998876679
Q ss_pred CCEEEEc-cchhhhC-HhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISC-EMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~-~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
||+|+|. .+++|++ +++...+++++.++|+|||.+++.++..+.
T Consensus 101 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (239)
T 3bxo_A 101 FSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPE 146 (239)
T ss_dssp EEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTT
T ss_pred CcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcc
Confidence 9999965 4899984 467889999999999999999998765443
No 81
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.71 E-value=5.3e-17 Score=136.99 Aligned_cols=111 Identities=21% Similarity=0.355 Sum_probs=97.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC----CCceEEEEcccCCCC-CCCCCCEEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL----QDHIRLYLCDYRQLP-KAKKYDRIIS 142 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~~~-~~~~fD~I~~ 142 (288)
+++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.+++++...++ ..+++++++|+.+++ .+++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 47889999999999999999997 78999999999999999999887765 236899999999988 6789999999
Q ss_pred ccchhhhC-HhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 143 CEMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 143 ~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
..+++|++ +.....+++++.++|+|||++++.++...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 99999993 34455999999999999999999887653
No 82
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.71 E-value=1.9e-16 Score=130.95 Aligned_cols=115 Identities=15% Similarity=0.156 Sum_probs=97.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKK 136 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~ 136 (288)
+..++..+. ++ +|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++....+. +++++++|+.+++ ++++
T Consensus 21 l~~~~~~~~--~~-~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~ 94 (202)
T 2kw5_A 21 LVSVANQIP--QG-KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADA 94 (202)
T ss_dssp HHHHHHHSC--SS-EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTT
T ss_pred HHHHHHhCC--CC-CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCC
Confidence 344455543 56 9999999999999999986 77999999999999999999988775 7999999999887 6689
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
||+|++.. .|++.++...+++++.++|+|||.+++.+.....
T Consensus 95 fD~v~~~~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 95 WEGIVSIF--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp CSEEEEEC--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred ccEEEEEh--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 99999954 4556578999999999999999999998876544
No 83
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.71 E-value=1.8e-16 Score=143.64 Aligned_cols=116 Identities=18% Similarity=0.167 Sum_probs=102.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
..+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+..+ ..|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP-VTA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-CCE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-CCC
Confidence 45666777778899999999999999999987 6789999999 99999999999998887789999999976223 359
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
|+|++..+++|++.+....+++++.++|+|||++++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999999766667999999999999999999877
No 84
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.70 E-value=4.2e-17 Score=142.72 Aligned_cols=116 Identities=22% Similarity=0.310 Sum_probs=95.8
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC---CceEEEEcccCCCC----C
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ---DHIRLYLCDYRQLP----K 133 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~---~~v~~~~~d~~~~~----~ 133 (288)
+.+.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++....+.. .++.+..+|+.+++ .
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 127 (293)
T 3thr_A 49 LLGLLRQHGCHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA 127 (293)
T ss_dssp HHHHHHHTTCCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred HHHHhcccCCCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc
Confidence 333333456789999999999999999987 779999999999999999887443321 35789999998865 5
Q ss_pred CCCCCEEEEc-cchhhhCH-----hhHHHHHHHHhcccccCcEEEEEeec
Q 048309 134 AKKYDRIISC-EMMEAVGH-----EYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 134 ~~~fD~I~~~-~~l~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++||+|++. .+++|++. ++...+++++.++|||||.+++....
T Consensus 128 ~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 128 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp TTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6899999998 89999954 45899999999999999999997653
No 85
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.70 E-value=5.5e-17 Score=146.52 Aligned_cols=137 Identities=15% Similarity=0.179 Sum_probs=109.2
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHH-------H
Q 048309 42 YDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKV-------N 113 (288)
Q Consensus 42 Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~-------~ 113 (288)
|.........+.....+..+++.+.+.++.+|||||||+|.++..++...++ +|+|||+++.+++.|+++. +
T Consensus 146 Ye~Fs~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~ 225 (438)
T 3uwp_A 146 YEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMK 225 (438)
T ss_dssp CSSSCGGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence 5544344445556677888999999999999999999999999999876455 5999999999999998754 3
Q ss_pred HcCC-CCceEEEEcccCCCC-CC--CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 114 EAGL-QDHIRLYLCDYRQLP-KA--KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 114 ~~g~-~~~v~~~~~d~~~~~-~~--~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
..|+ ..+++++++|+.+++ .+ ..||+|+++..+. . ++....+.++.+.|||||+|++.+...+..
T Consensus 226 ~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKPGGrIVssE~f~p~d 294 (438)
T 3uwp_A 226 WYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-G--PEVDHQLKERFANMKEGGRIVSSKPFAPLN 294 (438)
T ss_dssp HHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCTTCEEEESSCSSCTT
T ss_pred HhCCCCCCeEEEECcccCCccccccCCccEEEEccccc-C--chHHHHHHHHHHcCCCCcEEEEeecccCCC
Confidence 4455 258999999999877 22 4799999987653 3 677888899999999999999987665543
No 86
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.70 E-value=4.7e-17 Score=140.69 Aligned_cols=112 Identities=15% Similarity=0.134 Sum_probs=88.8
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC----------------------------
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL---------------------------- 117 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~---------------------------- 117 (288)
...++.+|||||||+|.++..++.....+|+|+|+|+.|++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999887776654223799999999999999987754320
Q ss_pred CCceE-EEEcccCCC-C----CCCCCCEEEEccchhhhC--HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 118 QDHIR-LYLCDYRQL-P----KAKKYDRIISCEMMEAVG--HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 118 ~~~v~-~~~~d~~~~-~----~~~~fD~I~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
..++. ++++|+.+. + ..++||+|++..+++|+. .+++..++++++++|||||.|++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 01244 899999874 2 246899999999999973 367889999999999999999998754
No 87
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.70 E-value=5.3e-16 Score=139.94 Aligned_cols=121 Identities=16% Similarity=0.273 Sum_probs=106.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
...+++.+...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.++++++..+++++++++.+|+.+.+.+ .
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 256 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-E 256 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-C
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-C
Confidence 456777777788899999999999999999987 6789999999 999999999999988877799999999987632 3
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+|+|++..+++|+++++...+++++.+.|+|||++++.+...+.
T Consensus 257 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 257 ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 49999999999997777899999999999999999998877654
No 88
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.69 E-value=1.1e-16 Score=129.79 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=97.5
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C-C
Q 048309 57 KHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P-K 133 (288)
Q Consensus 57 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-~ 133 (288)
....+++.+. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|+++++..+++++++++.+|+.+. + .
T Consensus 18 ~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 97 (177)
T 2esr_A 18 VRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL 97 (177)
T ss_dssp CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh
Confidence 3445556655 56788999999999999999998744699999999999999999999988866899999999874 3 4
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHh--cccccCcEEEEEeecCC
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCE--SLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~ 179 (288)
.++||+|++...++. ......++.+. ++|+|||.+++......
T Consensus 98 ~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 98 TGRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp CSCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred cCCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 567999999877643 34566667776 99999999999876543
No 89
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.69 E-value=2.6e-16 Score=140.44 Aligned_cols=120 Identities=12% Similarity=0.144 Sum_probs=104.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
...+++.++..+ .+|||+|||+|..+..+++. ++.+++++|+ +.+++.+++++...++.++++++.+|+.+ +.+++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCC
Confidence 356667776666 89999999999999999987 6789999999 99999999998877766789999999987 43368
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
||+|++..+++|++++....+++++.+.|+|||++++.+...+.
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99999999999997777779999999999999999998876544
No 90
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.69 E-value=1.4e-16 Score=143.18 Aligned_cols=118 Identities=20% Similarity=0.239 Sum_probs=102.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
....+++.+...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++++.+++.++++++.+|+.+++.+++
T Consensus 38 y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 38 YQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 3456667777778899999999999999999987446999999996 889999999999987799999999999875578
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
||+|++..+++|+..+.....+.++.++|||||.+++..
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 999999999888866677788889999999999998643
No 91
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.69 E-value=3.9e-16 Score=140.73 Aligned_cols=117 Identities=19% Similarity=0.250 Sum_probs=102.8
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
..+++.+...++.+|||||||+|..+..+++. +..+++++|+ +.+++.+++++...++.++++++.+|+.+..+ ..|
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 250 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKA 250 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCc
Confidence 45667777778899999999999999999987 6789999999 99999999999998887789999999976223 359
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|+|++..+++|++.++...+++++.++|+|||++++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999999999997666789999999999999999998776
No 92
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=1.7e-16 Score=140.42 Aligned_cols=110 Identities=11% Similarity=0.090 Sum_probs=93.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC------CCCceEEEEcccCCCC-------CC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAG------LQDHIRLYLCDYRQLP-------KA 134 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g------~~~~v~~~~~d~~~~~-------~~ 134 (288)
.++.+|||+|||+|.++..+++....+++|+|+|+.+++.|+++....+ ...+++++++|+.+.+ .+
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3678999999999999999987656799999999999999999887542 1247999999998864 24
Q ss_pred CCCCEEEEccchhhh--CHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEAV--GHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|++..+++|+ +.++...+++++.++|+|||.+++.++.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 589999999999987 4567889999999999999999998764
No 93
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=4.4e-17 Score=143.72 Aligned_cols=109 Identities=11% Similarity=0.009 Sum_probs=87.5
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-----ceEEEEccc------CCC--C-CC
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQD-----HIRLYLCDY------RQL--P-KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~-----~v~~~~~d~------~~~--~-~~ 134 (288)
++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++....+... ++++.+.|+ .++ + ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 578999999999987766665545799999999999999999987765311 267888888 322 1 45
Q ss_pred CCCCEEEEccchhhh-CHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEAV-GHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|+|.++++++ ..++...+++++.++|||||++++.+..
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 799999999999875 3346689999999999999999998764
No 94
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.69 E-value=4.7e-16 Score=131.92 Aligned_cols=151 Identities=17% Similarity=0.192 Sum_probs=110.0
Q ss_pred hhhhHHHHHhhhhhcCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cC
Q 048309 14 KVNQKSYFLRHISRKNSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG 92 (288)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~ 92 (288)
.+..++..+ ....+.........+..+... .+.....+.+..++.. .++.+|||||||+|..+..+++. ++
T Consensus 24 ~l~~yl~~~--~~~~~~~l~~l~~~~~~~~~~---~~~~~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~ 95 (232)
T 3ntv_A 24 LNKKYLIDL--HQHQNSSIEVLREFAEVNEVP---IVDRLTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDD 95 (232)
T ss_dssp HHHHHHHHH--HGGGCCGGGGHHHHHHHTTCC---CCCHHHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTT
T ss_pred HHHHHHHHh--CCCCCHHHHHHHHHHHHcCCC---CcCHHHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCC
Confidence 345544443 333444444444444444332 1223344444444443 36789999999999999999985 57
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC---CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCc
Q 048309 93 CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK---AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDG 169 (288)
Q Consensus 93 ~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~---~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 169 (288)
.+|+++|+++.+++.|+++++..++.++++++++|+.+..+ +++||+|++.... .....+++++.++|+|||
T Consensus 96 ~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~-----~~~~~~l~~~~~~LkpgG 170 (232)
T 3ntv_A 96 IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAK-----AQSKKFFEIYTPLLKHQG 170 (232)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTS-----SSHHHHHHHHGGGEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcH-----HHHHHHHHHHHHhcCCCe
Confidence 89999999999999999999999987789999999987643 6899999987543 445789999999999999
Q ss_pred EEEEEeec
Q 048309 170 LLVLQFSS 177 (288)
Q Consensus 170 ~l~~~~~~ 177 (288)
++++.+..
T Consensus 171 ~lv~d~~~ 178 (232)
T 3ntv_A 171 LVITDNVL 178 (232)
T ss_dssp EEEEECTT
T ss_pred EEEEeeCC
Confidence 99985543
No 95
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.69 E-value=4.2e-17 Score=131.25 Aligned_cols=109 Identities=13% Similarity=0.178 Sum_probs=94.3
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCC
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYD 138 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD 138 (288)
.+++.+...++.+|||+|||+|.++..+++.. .+++|+|+++.+++.++++ . ++++++.+| .+ ++++||
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d---~~~~~~~~D 77 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-TKLYCIDINVIALKEVKEK-----F-DSVITLSDP---KEIPDNSVD 77 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCTTHHHHHTTE-EEEEEECSCHHHHHHHHHH-----C-TTSEEESSG---GGSCTTCEE
T ss_pred HHHHhcCcCCCCeEEEECCCCCHHHHHHHhhc-CeEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC---CCCCCCceE
Confidence 44555666788899999999999999999874 4999999999999999887 2 479999999 33 567999
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+|++..+++|+ .++..+++++.++|+|||++++.++....
T Consensus 78 ~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 78 FILFANSFHDM--DDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEEESCSTTC--SCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred EEEEccchhcc--cCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 99999999999 67899999999999999999998876543
No 96
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.69 E-value=6.4e-16 Score=134.43 Aligned_cols=124 Identities=9% Similarity=0.104 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHcC-CCCCCEEEEECCcc---cHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc
Q 048309 52 VAQMRKHSLLIEKAR-VSKEHEVLEIGCGW---GTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC 126 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~-~~~~~~vLDiGcG~---G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 126 (288)
..++..+..+++.+. ..+..+|||||||+ |.++..+.+. ++.+|+++|+|+.|++.|++++... .+++++++
T Consensus 59 ~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~ 135 (274)
T 2qe6_A 59 IENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTA 135 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEEC
T ss_pred HHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEe
Confidence 455566666666664 33457999999999 9887766655 6789999999999999999988532 47999999
Q ss_pred ccCCCC------------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 127 DYRQLP------------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 127 d~~~~~------------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
|+.+.. +..+||+|++..+++|++.++...+++++.++|+|||.|++.+...
T Consensus 136 D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 136 DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 997631 1248999999999999976668999999999999999999988765
No 97
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.68 E-value=6.3e-17 Score=131.39 Aligned_cols=114 Identities=10% Similarity=0.163 Sum_probs=94.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 134 (288)
.....+...+ .++.+|||+|||+|.++..++.. ++.+|+++|+|+.|++.+++++...|+..++++ .|.....++
T Consensus 38 ~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~ 113 (200)
T 3fzg_A 38 DFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYK 113 (200)
T ss_dssp HHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTT
T ss_pred HHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCC
Confidence 3445555555 35779999999999999999876 778999999999999999999999998655666 566544567
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++||+|++..++|++ ++.+..+.++.+.|+|||+++...
T Consensus 114 ~~~DvVLa~k~LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 114 GTYDVVFLLKMLPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp SEEEEEEEETCHHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCcChhhHhhHHHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 889999999999999 677777779999999999888644
No 98
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.68 E-value=1.4e-17 Score=139.64 Aligned_cols=138 Identities=18% Similarity=0.210 Sum_probs=104.3
Q ss_pred hHHHHHhhhhhcCCC-CCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHH
Q 048309 31 LAQAHRNISYHYDLD-EDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAE 109 (288)
Q Consensus 31 ~~~~~~~~a~~Yd~~-~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~ 109 (288)
....|+..+..|+.. ...............+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~ 91 (227)
T 3e8s_A 13 LLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAAR 91 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHH
Confidence 345566555555532 011222222223345666665567789999999999999999987 789999999999999998
Q ss_pred HHHHHcCCCCceEEEEcccCCC---C--CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 110 MKVNEAGLQDHIRLYLCDYRQL---P--KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 110 ~~~~~~g~~~~v~~~~~d~~~~---~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
++ .++.+..+|+.++ + ..++||+|++..+++ . .++..+++++.++|+|||++++.+....
T Consensus 92 ~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 156 (227)
T 3e8s_A 92 AA-------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPW 156 (227)
T ss_dssp HT-------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred Hh-------cccccchhhHHhhcccccccCCCccEEEECchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 77 3578888888776 3 445699999999998 4 6788999999999999999999887643
No 99
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=7.2e-17 Score=134.89 Aligned_cols=151 Identities=18% Similarity=0.173 Sum_probs=112.7
Q ss_pred hhHHHHHhhhhhcCChHHHHHhhhhhcCCCCCCCHHH----HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHcc
Q 048309 16 NQKSYFLRHISRKNSLAQAHRNISYHYDLDEDEDLKV----AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQT 91 (288)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~a~~Yd~~~~~~l~~----a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~ 91 (288)
.++...++...+...+...+...+ |+.. ...+.. .+......+++.+...++.+|||+|||+|.++..+++..
T Consensus 23 ~~v~~a~~~~~r~~~~~~~~~~~~--y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~ 99 (215)
T 2yxe_A 23 KRVIDALLKVPREEFLPEHLKEYA--YVDT-PLEIGYGQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV 99 (215)
T ss_dssp HHHHHHHHHSCGGGGSCGGGGGGT--TSCS-CEEEETTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHcCCchhhhhc--ccCC-CccCCCCcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHh
Confidence 345566665566555555544433 5432 111100 113345567777788889999999999999999999873
Q ss_pred C--CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC
Q 048309 92 G--CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD 168 (288)
Q Consensus 92 ~--~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 168 (288)
+ .+|+++|+++.+++.+++++...+++ +++++.+|+.... ..++||+|++..+++|++ +++.++|+||
T Consensus 100 ~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pg 170 (215)
T 2yxe_A 100 GEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP--------EPLIRQLKDG 170 (215)
T ss_dssp CTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGGGCCEEEEEESSBBSSCC--------HHHHHTEEEE
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCCCCCeeEEEECCchHHHH--------HHHHHHcCCC
Confidence 2 79999999999999999999888874 6999999986543 367899999999999984 3778999999
Q ss_pred cEEEEEeecC
Q 048309 169 GLLVLQFSST 178 (288)
Q Consensus 169 G~l~~~~~~~ 178 (288)
|++++.....
T Consensus 171 G~lv~~~~~~ 180 (215)
T 2yxe_A 171 GKLLMPVGRY 180 (215)
T ss_dssp EEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999977554
No 100
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.68 E-value=1.2e-16 Score=140.15 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=84.8
Q ss_pred CCCCEEEEECCcccHHHHHH----HHc-cCCEE--EEEcCCHHHHHHHHHHHHHc-CCCCceEE--EEcccCCCC-----
Q 048309 68 SKEHEVLEIGCGWGTFAIEV----VRQ-TGCNY--TGITLSAEQMKYAEMKVNEA-GLQDHIRL--YLCDYRQLP----- 132 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~l----a~~-~~~~v--~giD~s~~~~~~a~~~~~~~-g~~~~v~~--~~~d~~~~~----- 132 (288)
.++.+|||||||+|.++..+ +.. ++..| +|+|+|++|++.|++++... ++ .++++ ..++.++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 56779999999999876543 332 35544 99999999999999998764 44 35554 455555432
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.+++||+|++..+++|+ +++..++++++++|||||.+++.....
T Consensus 130 ~~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYV--KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TTCCCCEEEEEEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred ccCCCceeEEEEeeeeeec--CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 35789999999999999 788999999999999999999986543
No 101
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.68 E-value=3.3e-16 Score=133.42 Aligned_cols=100 Identities=14% Similarity=0.219 Sum_probs=88.3
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C---CCCCCEEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K---AKKYDRIIS 142 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~---~~~fD~I~~ 142 (288)
.++.+|||||||+|..+..++.. ++.+|+|+|+|+.+++.++++++..+++ +++++++|+.+++ . .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEE
Confidence 46789999999999999999865 6789999999999999999999998884 6999999998865 2 578999999
Q ss_pred ccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 143 CEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 143 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+ .++..+++.+.++|+|||.+++.
T Consensus 148 ~~~------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 148 RAV------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ECC------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred ecc------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 762 45789999999999999999885
No 102
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.67 E-value=2.5e-16 Score=131.00 Aligned_cols=109 Identities=17% Similarity=0.269 Sum_probs=93.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++... . .+++++++|+.+++ ++++||+|++..++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDFPSASFDVVLEKGTL 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCSCSSCEEEEEEESHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCCCCCcccEEEECcch
Confidence 57789999999999999999987323899999999999999988754 2 47999999999887 66899999999999
Q ss_pred hhhC-------------HhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 147 EAVG-------------HEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 147 ~~~~-------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+++. ..+...+++++.++|+|||.+++.++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 8774 35778999999999999999999776543
No 103
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=6e-16 Score=126.50 Aligned_cols=109 Identities=23% Similarity=0.377 Sum_probs=94.2
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCE
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDR 139 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~ 139 (288)
++..+ +.++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++. .+++++++|+.+++ ++++||+
T Consensus 39 ~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~~D~ 110 (195)
T 3cgg_A 39 LIDAM-APRGAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF------PEARWVVGDLSVDQISETDFDL 110 (195)
T ss_dssp HHHHH-SCTTCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC------TTSEEEECCTTTSCCCCCCEEE
T ss_pred HHHHh-ccCCCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC------CCCcEEEcccccCCCCCCceeE
Confidence 44444 457889999999999999999987 789999999999999998875 35899999999877 5689999
Q ss_pred EEEc-cchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 140 IISC-EMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 140 I~~~-~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|++. .+++|++.++...+++++.++|+|||.+++....
T Consensus 111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 9998 7889987778899999999999999999996543
No 104
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.67 E-value=4.3e-16 Score=140.01 Aligned_cols=117 Identities=15% Similarity=0.275 Sum_probs=96.2
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
..+++.+...++.+|||||||+|..+..+++. ++.+++++|+ +.++. +++.+..++.++++++.+|+.+ +.+ +|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-~~p-~~ 248 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-EVP-HA 248 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-CCC-CC
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-CCC-CC
Confidence 46777778888899999999999999999987 6778999999 55554 3333344555689999999973 322 99
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|+|++..++||+++++...++++++++|||||++++.+...+.
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 9999999999997766789999999999999999998876554
No 105
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=5.4e-16 Score=128.64 Aligned_cols=104 Identities=22% Similarity=0.247 Sum_probs=91.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccch
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMM 146 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l 146 (288)
..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.|+++++..++. +++++++|+.+.. +++||+|++...+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~-~~~fD~i~~~~~~ 135 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIY-DIALQKTSLLADV-DGKFDLIVANILA 135 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-CCEEEESSTTTTC-CSCEEEEEEESCH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeccccccC-CCCceEEEECCcH
Confidence 3578899999999999999998864459999999999999999999998885 4999999998764 4799999999888
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++ ..+++++.++|+|||.+++.++.
T Consensus 136 ~~~-----~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 136 EIL-----LDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp HHH-----HHHGGGSGGGEEEEEEEEEEEEE
T ss_pred HHH-----HHHHHHHHHhcCCCCEEEEEecC
Confidence 765 78899999999999999996543
No 106
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=6.8e-16 Score=149.12 Aligned_cols=120 Identities=16% Similarity=0.237 Sum_probs=100.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHc------CCCCceEEEEcc
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQT--GCNYTGITLSAEQMKYAEMKVNEA------GLQDHIRLYLCD 127 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~giD~s~~~~~~a~~~~~~~------g~~~~v~~~~~d 127 (288)
..+..+++.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.|++++... ++ .+++++++|
T Consensus 708 qRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGD 786 (950)
T 3htx_A 708 QRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGS 786 (950)
T ss_dssp HHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESC
T ss_pred HHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECc
Confidence 444555555555578899999999999999999873 279999999999999999876532 44 489999999
Q ss_pred cCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 128 YRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 128 ~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.+++ ..++||+|++..+++|+++.....+++++.++|||| .+++.+..
T Consensus 787 a~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 787 ILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp TTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred hHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99988 668999999999999997767778999999999999 77776544
No 107
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.67 E-value=2e-16 Score=131.32 Aligned_cols=108 Identities=10% Similarity=0.128 Sum_probs=90.8
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CceEEEEcccCCCC---CCCC-CCEEEEc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ-DHIRLYLCDYRQLP---KAKK-YDRIISC 143 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~---~~~~-fD~I~~~ 143 (288)
++.+|||+|||+|.++..++.....+|+|+|+|+.+++.|+++++..++. ++++++++|+.++. .+++ ||+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 57899999999999999877764459999999999999999999998874 58999999998754 2578 9999998
Q ss_pred cchhhhCHhhHHHHHHHH--hcccccCcEEEEEeecCC
Q 048309 144 EMMEAVGHEYMEEYFGCC--ESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 179 (288)
..++ . .....+++.+ .++|+|||.+++.+....
T Consensus 133 ~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 8754 3 5677888888 778999999999776543
No 108
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.66 E-value=8.6e-16 Score=129.12 Aligned_cols=118 Identities=18% Similarity=0.153 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
....+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++.++++++++|+.
T Consensus 44 ~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 44 PTQGKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444555555443 35789999999999999999987 3 68999999999999999999999999778999999997
Q ss_pred CCC-----C-CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 130 QLP-----K-AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 130 ~~~-----~-~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.. . .++||+|++.... .....+++++.++|+|||++++.+..
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred HHHHHHHhcCCCCcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 642 1 2679999987663 34578999999999999999986544
No 109
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=1.3e-16 Score=135.95 Aligned_cols=108 Identities=19% Similarity=0.099 Sum_probs=93.9
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C-----CCCCCEE
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K-----AKKYDRI 140 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~-----~~~fD~I 140 (288)
+.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++... .+++++++|+.+++ . ...||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~-~~~v~gvD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQF-FPRVIGLDVSKSALEIAAKENTA----ANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHH-SSCEEEEESCHHHHHHHHHHSCC----TTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHh-CCCEEEEECCHHHHHHHHHhCcc----cCceEEECcccccccccccccccCccEE
Confidence 457789999999999999999987 45999999999999999988621 47999999999865 1 1359999
Q ss_pred EEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 141 ISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 141 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
++..+++|+++++...+++++.++|||||++++.++..+
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 129 YMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp EEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred EEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 999999999777899999999999999999999887654
No 110
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.66 E-value=3.5e-16 Score=127.53 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=95.7
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---
Q 048309 57 KHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--- 132 (288)
Q Consensus 57 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--- 132 (288)
....+++.+. ..++.+|||+|||+|.++..+++....+|+|+|+++.+++.|+++++..++.++++++++|+.+..
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF 110 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH
Confidence 3344555553 357789999999999999998886457999999999999999999998887668999999998743
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHH--hcccccCcEEEEEeecCC
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCC--ESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~~ 179 (288)
..++||+|++...++. ......++.+ .++|+|||.+++......
T Consensus 111 ~~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYAK---QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHTTCCEEEEEECCCGGG---CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhcCCCCCEEEECCCCCc---hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 2689999999887542 3445666666 899999999999766543
No 111
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.66 E-value=7.5e-17 Score=146.48 Aligned_cols=116 Identities=16% Similarity=0.170 Sum_probs=97.8
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYD 138 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD 138 (288)
..+.+.....++.+|||||||+|.++..+++....+|+|+|+| .+++.|+++++.+++.++++++++|+.+++.+++||
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D 131 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVD 131 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEE
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcce
Confidence 4444555667889999999999999999998733499999999 999999999999999878999999999988448999
Q ss_pred EEEEccchhhhC-HhhHHHHHHHHhcccccCcEEEEEe
Q 048309 139 RIISCEMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 139 ~I~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|++..+.+++. ...+..+++.+.++|+|||.+++..
T Consensus 132 ~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 132 VIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 999976555542 2457889999999999999998744
No 112
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.66 E-value=1.1e-15 Score=128.96 Aligned_cols=109 Identities=18% Similarity=0.223 Sum_probs=90.4
Q ss_pred cCCCCCCEEEEECCc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEE
Q 048309 65 ARVSKEHEVLEIGCG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRII 141 (288)
Q Consensus 65 ~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~ 141 (288)
..++++.+|||+||| +|.++..+++..+.+|+|+|+|+.+++.|+++++..++ +++++++|+..+. ++++||+|+
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEE
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEE
Confidence 345688999999999 99999999886567999999999999999999999887 7999999976543 458999999
Q ss_pred EccchhhhCH-----------------hhHHHHHHHHhcccccCcEEEEEe
Q 048309 142 SCEMMEAVGH-----------------EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 142 ~~~~l~~~~~-----------------~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++..+.+.+. .....+++++.++|+|||.+++..
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 9877655421 224789999999999999999853
No 113
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.66 E-value=4.9e-16 Score=130.16 Aligned_cols=107 Identities=20% Similarity=0.254 Sum_probs=89.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCCCCEEEEc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKKYDRIISC 143 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~fD~I~~~ 143 (288)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++++..++ .+++++++|+.+++ ++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~-~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEA-QNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCC-SSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 35779999999999999999987 678999999999999999999999888 48999999998864 46789999987
Q ss_pred cchhhhCH------hhHHHHHHHHhcccccCcEEEEEe
Q 048309 144 EMMEAVGH------EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 144 ~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+...+... -....+++++.++|+|||.+++.+
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 65432210 013689999999999999999864
No 114
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.66 E-value=6.9e-16 Score=138.27 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=95.3
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~f 137 (288)
..+.+.+...++.+|||||||+|.++..+++....+|+|+|+|+ +++.|+++++.+++.++++++.+|+.+++ +.++|
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 132 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKV 132 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcE
Confidence 44555556678899999999999999999987435999999996 99999999999998779999999999987 55899
Q ss_pred CEEEEccc---hhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 138 DRIISCEM---MEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 138 D~I~~~~~---l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
|+|++..+ +.+. ..+..++.++.++|||||.++.
T Consensus 133 D~Ivs~~~~~~l~~~--~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 133 DVIISEWMGYFLLFE--SMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EEEEECCCBTTBTTT--CHHHHHHHHHHHHEEEEEEEES
T ss_pred EEEEEcCchhhccCH--HHHHHHHHHHHhhcCCCcEEEc
Confidence 99999763 4444 5778899999999999999983
No 115
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.66 E-value=6.9e-16 Score=128.06 Aligned_cols=100 Identities=15% Similarity=0.286 Sum_probs=88.4
Q ss_pred CCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
++.+|||+|||+|..+..++.. ++.+++|+|+|+.+++.+++++...+++ +++++++|+.+.++.++||+|++...
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPSEPPFDGVISRAF-- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCCCSCEEEEECSCS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCccCCcCEEEEecc--
Confidence 4789999999999999999987 6789999999999999999999998884 59999999998776679999998542
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.+...+++++.++|+|||.+++..
T Consensus 142 ----~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 142 ----ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ----SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ----CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 345789999999999999999864
No 116
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.66 E-value=3.3e-16 Score=136.97 Aligned_cols=109 Identities=18% Similarity=0.158 Sum_probs=84.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-----------------CCC------------
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA-----------------GLQ------------ 118 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~-----------------g~~------------ 118 (288)
.++.+|||||||+|..+..++...+.+|+|+|+|+.|++.|+++++.. +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 367899999999999554444435679999999999999998865421 100
Q ss_pred CceEEEEcccCC-CC------CCCCCCEEEEccchhhhCH--hhHHHHHHHHhcccccCcEEEEEee
Q 048309 119 DHIRLYLCDYRQ-LP------KAKKYDRIISCEMMEAVGH--EYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 119 ~~v~~~~~d~~~-~~------~~~~fD~I~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
..++++.+|+.+ ++ ++++||+|++..+++|+.+ +++..+++++.++|||||+|++...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 015678889987 43 2356999999999999532 5899999999999999999999753
No 117
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.66 E-value=7.7e-16 Score=143.80 Aligned_cols=152 Identities=21% Similarity=0.240 Sum_probs=115.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
...+++.+...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++++.+++.++++++.+|+.+++.+++|
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~f 225 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 225 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCe
Confidence 345666666667889999999999999999886556999999998 9999999999999977999999999987745789
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC---CCc---ccccccCchhhHhhhccCCCCCCCHHHHH
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST---PDA---RYNEYRLSSDFIKEYIFPGGCLPSLSRIT 210 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~---~~~~~~~~~~~~~~~i~~~~~~p~~~~~~ 210 (288)
|+|++..+++|...+.....+.++.++|+|||.+++..... +.. .+.+......++....+++..++++..+.
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e~~~~~~~w~~~~~~g~dl~~l~~~~ 304 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAA 304 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHHHHHHHHHHHSSCBTTBCCGGGHHHH
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHHHhhccCccccccCCCcChhhhhhHH
Confidence 99999988888865667778889999999999998643221 100 00000001223333478888888776654
No 118
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=2.2e-15 Score=129.08 Aligned_cols=118 Identities=17% Similarity=0.133 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
....+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++.++++++++|+.
T Consensus 49 ~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 125 (248)
T 3tfw_A 49 ANQGQFLALLVRL---TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPAL 125 (248)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHHhh---cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444445544443 35789999999999999999987 3 68999999999999999999999999778999999997
Q ss_pred CC-C---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 130 QL-P---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 130 ~~-~---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+. + ..++||+|++.... .....+++++.++|||||++++.+..
T Consensus 126 ~~l~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 126 QSLESLGECPAFDLIFIDADK-----PNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp HHHHTCCSCCCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred HHHHhcCCCCCeEEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 63 2 23589999987642 45678999999999999999986553
No 119
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.65 E-value=1.2e-15 Score=127.51 Aligned_cols=107 Identities=22% Similarity=0.346 Sum_probs=90.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCCCCEEEEc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKKYDRIISC 143 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~fD~I~~~ 143 (288)
.++.+|||||||+|.++..+++. ++.+++|+|+|+.+++.|++++...++ .+++++++|+.+++ ++++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35789999999999999999987 678999999999999999999998888 58999999999865 45789999998
Q ss_pred cchhhhCHh------hHHHHHHHHhcccccCcEEEEEe
Q 048309 144 EMMEAVGHE------YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 144 ~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+.... ....+++++.++|+|||.+++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 765432100 23679999999999999999854
No 120
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.65 E-value=3.9e-16 Score=133.94 Aligned_cols=101 Identities=15% Similarity=0.163 Sum_probs=88.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC----CCCCCEEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK----AKKYDRIIS 142 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~----~~~fD~I~~ 142 (288)
.++.+|||||||+|..+..++.. ++.+|+++|+|+.+++.++++++..++. +++++++|+++++. .++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEE
Confidence 46789999999999999999987 6789999999999999999999999984 69999999988762 379999999
Q ss_pred ccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 143 CEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 143 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+ .+...+++.+.++|||||++++..
T Consensus 158 ~a~------~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 158 RAV------APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESS------CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCc------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 643 345789999999999999998743
No 121
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=1.3e-15 Score=124.24 Aligned_cols=114 Identities=20% Similarity=0.292 Sum_probs=97.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LPKAK 135 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~~~~ 135 (288)
....+++.+...++.+|||+|||+|.++..+++.. .+|+++|+++.+++.++++++..++..+++++++|+.+ ++..+
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 99 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIP 99 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCC
Confidence 34456677778889999999999999999998864 89999999999999999999988886689999999877 22326
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|++..+++++ ..+++++.++|+|||.+++...
T Consensus 100 ~~D~v~~~~~~~~~-----~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 100 DIDIAVVGGSGGEL-----QEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CEEEEEESCCTTCH-----HHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCEEEECCchHHH-----HHHHHHHHHhcCCCcEEEEEec
Confidence 89999999877654 7899999999999999998654
No 122
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=4e-16 Score=130.91 Aligned_cols=94 Identities=22% Similarity=0.305 Sum_probs=84.4
Q ss_pred CCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccchhh
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMMEA 148 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l~~ 148 (288)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ +++++++|+.+++ ++++||+|++..+++|
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTICF 114 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGGG
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHhh
Confidence 789999999999999888653 9999999999999876 4789999999887 5679999999999999
Q ss_pred hCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 149 VGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 149 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
+ .++..+++++.++|+|||.+++.+...
T Consensus 115 ~--~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 115 V--DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp S--SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred c--cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 9 678899999999999999999987654
No 123
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.64 E-value=8.4e-16 Score=132.45 Aligned_cols=114 Identities=16% Similarity=0.234 Sum_probs=94.6
Q ss_pred HHHHcCCC-CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCC
Q 048309 61 LIEKARVS-KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKK 136 (288)
Q Consensus 61 l~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~ 136 (288)
+...+... ++.+|||+|||+|.++..+++....+|+|+|+++.+++.|+++++..++.++++++++|+.++. ..++
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 119 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTC
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCC
Confidence 34445666 7899999999999999999987445999999999999999999999999778999999999876 3689
Q ss_pred CCEEEEccchhhh------------------CHhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEAV------------------GHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~~------------------~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
||+|+++..+... .......+++.+.++|+|||++++.
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 9999997654322 1134678999999999999999984
No 124
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.64 E-value=7.1e-17 Score=148.44 Aligned_cols=155 Identities=14% Similarity=0.155 Sum_probs=111.1
Q ss_pred CHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceE-EEEcc
Q 048309 49 DLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIR-LYLCD 127 (288)
Q Consensus 49 ~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~-~~~~d 127 (288)
.+.....+....+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.|+++ +++.... +...+
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~ 161 (416)
T 4e2x_A 87 VMREHFAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKAT 161 (416)
T ss_dssp HHHHHHHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc----CCCcceeeechhh
Confidence 455666677788888888888999999999999999999986 77999999999999998865 3321111 22233
Q ss_pred cCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCH
Q 048309 128 YRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSL 206 (288)
Q Consensus 128 ~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 206 (288)
...++ .+++||+|++..+++|+ .++..+++++.++|||||++++.+........ ... ......+.....+.
T Consensus 162 ~~~l~~~~~~fD~I~~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~-----~~~-~~~~~~~~~~~~s~ 233 (416)
T 4e2x_A 162 ADDVRRTEGPANVIYAANTLCHI--PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVA-----KTS-FDQIFDEHFFLFSA 233 (416)
T ss_dssp HHHHHHHHCCEEEEEEESCGGGC--TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHH-----HTC-GGGCSTTCCEECCH
T ss_pred HhhcccCCCCEEEEEECChHHhc--CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhh-----hcc-hhhhhhhhhhcCCH
Confidence 33444 45899999999999999 68999999999999999999997654221100 000 11111233445677
Q ss_pred HHHHHHHHHc
Q 048309 207 SRITSAMAAA 216 (288)
Q Consensus 207 ~~~~~~~~~~ 216 (288)
.++.+.++++
T Consensus 234 ~~l~~ll~~a 243 (416)
T 4e2x_A 234 TSVQGMAQRC 243 (416)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 7777666554
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.64 E-value=1.2e-15 Score=138.40 Aligned_cols=118 Identities=11% Similarity=0.199 Sum_probs=97.9
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCC--ceEEEEcccCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQD--HIRLYLCDYRQLPKAK 135 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~--~v~~~~~d~~~~~~~~ 135 (288)
..+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.++++++.+++.. +++++.+|+.+..+++
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~ 291 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPF 291 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTT
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCC
Confidence 34577777777789999999999999999988 57899999999999999999999888643 5888999998855668
Q ss_pred CCCEEEEccchhhh---CHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAV---GHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|+++..+++. +......+++++.++|+|||.+++...
T Consensus 292 ~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 99999999988763 223455789999999999999999643
No 126
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.64 E-value=6.2e-16 Score=139.06 Aligned_cols=108 Identities=22% Similarity=0.271 Sum_probs=92.5
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEcc
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCE 144 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~ 144 (288)
.+.++.+|||||||+|.++..+++.+..+|+|+|+| ++++.|+++++.+++.++++++++|+.+++ +.++||+|++..
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 345788999999999999999998744599999999 599999999999999878999999999988 668999999976
Q ss_pred chhhh-CHhhHHHHHHHHhcccccCcEEEEE
Q 048309 145 MMEAV-GHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 145 ~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+.+++ .......++..+.++|||||.++..
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 54433 2267888999999999999998743
No 127
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.63 E-value=6.2e-15 Score=132.72 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=101.6
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
..+++.++..+..+|+|||||+|.++..++++ +..+++..|+ |++++.+++.++..+ .++++++.+|+.+.+. ..+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~~ 245 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PEA 245 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CCC
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CCc
Confidence 45666667777889999999999999999998 8889999997 889999998876555 4689999999987553 458
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|++++..++|++++++...+++++++.|+|||++++.+...++
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 9999999999998888889999999999999999998877654
No 128
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.63 E-value=2.4e-15 Score=128.82 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=112.1
Q ss_pred hhhHHHHHhhhhhcCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-C
Q 048309 15 VNQKSYFLRHISRKNSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-G 92 (288)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~ 92 (288)
+++++.-+....+.+.+-......+...... ...+...+.+.+..++.. .++.+|||||||+|..+..+++. + +
T Consensus 29 ~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~ 104 (247)
T 1sui_A 29 LYQYILETSVFPREHEAMKELREVTAKHPWN-IMTTSADEGQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPED 104 (247)
T ss_dssp HHHHHHHHHTSSSCTTHHHHHHHHHHTSTTG-GGSCCHHHHHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTT
T ss_pred HHHHHHHcccCCCCCHHHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCC
Confidence 4444433322335666655555554433221 112234555556655554 35679999999999999999987 3 6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C-C------CCCCCEEEEccchhhhCHhhHHHHHHHHhcc
Q 048309 93 CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P-K------AKKYDRIISCEMMEAVGHEYMEEYFGCCESL 164 (288)
Q Consensus 93 ~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-~------~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~ 164 (288)
.+|+++|+++.+++.|+++++..|+.++++++++|+.+. + . .++||+|++.... .+...+++++.++
T Consensus 105 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~ 179 (247)
T 1sui_A 105 GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADK-----DNYLNYHKRLIDL 179 (247)
T ss_dssp CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCS-----TTHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCch-----HHHHHHHHHHHHh
Confidence 899999999999999999999999877899999999764 2 1 5789999987542 4568899999999
Q ss_pred cccCcEEEEEeec
Q 048309 165 LAKDGLLVLQFSS 177 (288)
Q Consensus 165 LkpgG~l~~~~~~ 177 (288)
|+|||++++.+..
T Consensus 180 LkpGG~lv~d~~~ 192 (247)
T 1sui_A 180 VKVGGVIGYDNTL 192 (247)
T ss_dssp BCTTCCEEEECTT
T ss_pred CCCCeEEEEecCC
Confidence 9999999986543
No 129
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.63 E-value=3.2e-15 Score=126.58 Aligned_cols=117 Identities=20% Similarity=0.262 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL 131 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 131 (288)
.....+..++. ..++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.|+++++..++..+++++.+|+.+.
T Consensus 41 ~~~~~l~~~~~---~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 41 LGMESLLHLLK---MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp HHHHHHHHHHH---HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred HHHHHHHHHHh---ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 33344444443 346789999999999999999987 56899999999999999999999998876899999999885
Q ss_pred -C-C--CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 132 -P-K--AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 132 -~-~--~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+ . +++||+|++....+ +...+++.+.++|+|||++++.++.
T Consensus 118 ~~~~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HHhcccCCCccEEEECCCHH-----HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 3 2 57899999976643 5588999999999999999996543
No 130
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.63 E-value=4.1e-15 Score=136.45 Aligned_cols=119 Identities=10% Similarity=0.092 Sum_probs=97.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHH-------HHHHHHcCCC-CceEEEEc
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYA-------EMKVNEAGLQ-DHIRLYLC 126 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a-------~~~~~~~g~~-~~v~~~~~ 126 (288)
..+..+++.+.+.++.+|||||||+|.++..+++. +..+|+|+|+++.+++.| +++++..|+. .+++++++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 45667788888889999999999999999999987 345899999999999998 8888888853 68999998
Q ss_pred ccCCC----C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 127 DYRQL----P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 127 d~~~~----~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|.... + ..++||+|+++.++ +. ++....++++.+.|||||++++.+..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred CccccccccccccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 65432 1 24689999987666 33 57788899999999999999986533
No 131
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.63 E-value=1.5e-15 Score=127.68 Aligned_cols=118 Identities=21% Similarity=0.200 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
....+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.++++++..++.++++++++|+.
T Consensus 50 ~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (225)
T 3tr6_A 50 PEQAQLLALLVKL---MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAK 126 (225)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHH
Confidence 3444555555544 35679999999999999999987 3 68999999999999999999999999777999999996
Q ss_pred CCC--CC-----CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 130 QLP--KA-----KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 130 ~~~--~~-----~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.. .. ++||+|++.... .....+++++.++|+|||++++.+..
T Consensus 127 ~~~~~~~~~~~~~~fD~v~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 127 DTLAELIHAGQAWQYDLIYIDADK-----ANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp HHHHHHHTTTCTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred HHHHHhhhccCCCCccEEEECCCH-----HHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 642 11 789999976542 45688999999999999999987654
No 132
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=3.2e-15 Score=135.77 Aligned_cols=121 Identities=16% Similarity=0.284 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHcC--CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC
Q 048309 53 AQMRKHSLLIEKAR--VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ 130 (288)
Q Consensus 53 a~~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 130 (288)
.....+..+.+.+. ..++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++++.+++ +++++++|+.+
T Consensus 215 ~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~~~--~v~~~~~D~~~ 291 (381)
T 3dmg_A 215 ASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL--KAQALHSDVDE 291 (381)
T ss_dssp HHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHTTC--CCEEEECSTTT
T ss_pred HHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCC--CeEEEEcchhh
Confidence 33444555555542 346789999999999999999997 77999999999999999999999887 48999999999
Q ss_pred CC-CCCCCCEEEEccchhh---hCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 131 LP-KAKKYDRIISCEMMEA---VGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 131 ~~-~~~~fD~I~~~~~l~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.. ..++||+|+++.++++ ........+++++.++|+|||.+++...
T Consensus 292 ~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 292 ALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp TSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 87 4589999999999887 2337788999999999999999999653
No 133
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.62 E-value=1.2e-15 Score=126.77 Aligned_cols=105 Identities=13% Similarity=0.142 Sum_probs=87.9
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C-CCCCCCEEEEccch
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P-KAKKYDRIISCEMM 146 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-~~~~fD~I~~~~~l 146 (288)
++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++..++ .+++++++|+.+. + ..++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 5789999999999999987776335999999999999999999999888 5899999999873 4 45789999998774
Q ss_pred hhhCHhhHHHHHHHHhc--ccccCcEEEEEeec
Q 048309 147 EAVGHEYMEEYFGCCES--LLAKDGLLVLQFSS 177 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 177 (288)
+ . .....+++.+.+ +|+|||++++.+..
T Consensus 133 ~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 3 456677777754 69999999997765
No 134
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.62 E-value=3e-15 Score=126.40 Aligned_cols=112 Identities=19% Similarity=0.265 Sum_probs=95.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
.....+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.+++++...+ +++++.+|+.+.. ..
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~ 132 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEE 132 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccC
Confidence 45567778888888999999999999999999986 5899999999999999999987654 7999999998733 56
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
++||+|++..+++|+. .++.++|+|||++++......
T Consensus 133 ~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLL--------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp CCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHHH--------HHHHHHcCCCcEEEEEEcCCC
Confidence 7899999999999984 257889999999999865543
No 135
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.62 E-value=2.7e-15 Score=125.38 Aligned_cols=104 Identities=19% Similarity=0.156 Sum_probs=83.5
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----CCCCCCCE
Q 048309 65 ARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----PKAKKYDR 139 (288)
Q Consensus 65 ~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~~~~~fD~ 139 (288)
+.++++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.+.+.++.. .++.++++|+... +..++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeE
Confidence 45678899999999999999999886 3469999999999987777666543 4789999998774 33479999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|++... .+ .....+++++.++|||||.+++..
T Consensus 130 V~~~~~-~~---~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 130 IYQDIA-QK---NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEECCC-ST---THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecc-Ch---hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999732 21 345567999999999999999963
No 136
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.62 E-value=5.6e-15 Score=119.56 Aligned_cols=111 Identities=12% Similarity=0.211 Sum_probs=94.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
.....+++.+...++.+|||+|||+|.++..+++ .+.+++|+|+++.+++.++++++..++ .+++++++|+.+..+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~ 99 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAEDVLDKL 99 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHHHGGGC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccccccCC
Confidence 3445667777777889999999999999999998 688999999999999999999999888 57999999998732557
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|++..+ .+...+++++.++ |||.+++.+.
T Consensus 100 ~~D~i~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 100 EFNKAFIGGT------KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp CCSEEEECSC------SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred CCcEEEECCc------ccHHHHHHHHhhC--CCCEEEEEec
Confidence 9999999887 3457888888888 9999998653
No 137
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.62 E-value=1e-15 Score=131.53 Aligned_cols=112 Identities=15% Similarity=0.146 Sum_probs=91.9
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCC---------------------------
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGL--------------------------- 117 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~--------------------------- 117 (288)
...++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 4456789999999999999988876 44 899999999999999988765321
Q ss_pred -CCce-EEEEcccCCCC--CC---CCCCEEEEccchhhhCH--hhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 118 -QDHI-RLYLCDYRQLP--KA---KKYDRIISCEMMEAVGH--EYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 118 -~~~v-~~~~~d~~~~~--~~---~~fD~I~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
..++ +++++|+.+.. ++ ++||+|++..+++|+++ .++..+++++.++|||||.+++.+...
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 0127 99999998864 34 78999999999995532 588999999999999999999987543
No 138
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.62 E-value=5.3e-17 Score=138.18 Aligned_cols=103 Identities=18% Similarity=0.254 Sum_probs=91.9
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhh
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEA 148 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~ 148 (288)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++..++..+++++++|+.+++..++||+|++..++++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGG 156 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSS
T ss_pred CCCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCC
Confidence 6789999999999999999986 689999999999999999999999886689999999998876689999999999998
Q ss_pred hCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 149 VGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 149 ~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
. ......+.++.++|+|||.+++.
T Consensus 157 ~--~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 P--DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp G--GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred c--chhhhHHHHHHhhcCCcceeHHH
Confidence 7 45555777889999999997764
No 139
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.62 E-value=1.3e-15 Score=128.70 Aligned_cols=106 Identities=16% Similarity=0.128 Sum_probs=89.5
Q ss_pred HHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCC
Q 048309 63 EKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKK 136 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~ 136 (288)
+.+.++||.+|||+|||+|.++..+++. +..+|+|+|+++.|++.++++++.. .|+..+.+|..+.. ..++
T Consensus 71 ~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 71 IELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp SCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCC
T ss_pred hhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccce
Confidence 4567899999999999999999999987 5679999999999999999887654 47999999887643 4578
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+|++... |. .+...++.++.+.|||||.+++..
T Consensus 148 vDvVf~d~~--~~--~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 148 VDGLYADVA--QP--EQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEEECCC--CT--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEEecc--CC--hhHHHHHHHHHHhccCCCEEEEEE
Confidence 999987533 33 567889999999999999999864
No 140
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.62 E-value=2.4e-15 Score=128.95 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=96.5
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
...++..+...++.+|||+|||+|.++..+++. ++.+|+++|+++.+++.|+++++..+++++++++++|+.+..+++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEE 161 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCC
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCC
Confidence 346777888889999999999999999999987 378999999999999999999999998767999999998765667
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+||+|++. . .+...+++++.++|+|||.+++..
T Consensus 162 ~~D~v~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 162 NVDHVILD-----L--PQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp SEEEEEEC-----S--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEEC-----C--CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 89999984 2 344678999999999999999854
No 141
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.62 E-value=7.1e-15 Score=133.06 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=93.8
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 59 SLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 59 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
..+++.+. ..+..+|||||||+|.++..+++. ++.+++++|+ +.+++.+++. .+++++.+|+.+ +.+..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~~ 262 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPKG 262 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCCC
Confidence 44555555 567789999999999999999987 7889999999 8888776532 479999999987 42233
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|+|++..++||++.++...++++++++|+|||++++.+...+.
T Consensus 263 -D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 263 -DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp -SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred -CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999998778889999999999999999998877654
No 142
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.62 E-value=2.3e-15 Score=134.26 Aligned_cols=112 Identities=23% Similarity=0.329 Sum_probs=93.1
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCE
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDR 139 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~ 139 (288)
+.+.+...++.+|||||||+|.++..+++.+..+|+|+|++ .+++.|+++++.+++.++++++.+|+.+++ +.++||+
T Consensus 30 i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 108 (328)
T 1g6q_1 30 IIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDI 108 (328)
T ss_dssp HHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEE
T ss_pred HHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccE
Confidence 33344445778999999999999999998744599999999 599999999999999878999999999987 5589999
Q ss_pred EEEccchhhh-CHhhHHHHHHHHhcccccCcEEEE
Q 048309 140 IISCEMMEAV-GHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 140 I~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
|++..+.+++ ....+..++..+.++|+|||.++.
T Consensus 109 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 9998654443 225678899999999999999974
No 143
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.61 E-value=2.6e-15 Score=126.05 Aligned_cols=108 Identities=19% Similarity=0.362 Sum_probs=91.6
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC--C-CCCC
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL--P-KAKK 136 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~-~~~~ 136 (288)
.+++.+. .++.+|||+|||+|.++..+++. +.+++|+|+++.+++.++++. .+++.+|+.+. + ++++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCc
Confidence 4455554 57889999999999999999987 689999999999999887652 37899999873 3 4579
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
||+|++..+++|+ .+...+++++.++|+|||.+++.+....
T Consensus 94 fD~v~~~~~l~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 94 FDCVIFGDVLEHL--FDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EEEEEEESCGGGS--SCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred cCEEEECChhhhc--CCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 9999999999999 6778999999999999999999876543
No 144
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=5.3e-15 Score=128.61 Aligned_cols=118 Identities=13% Similarity=0.250 Sum_probs=97.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK 133 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 133 (288)
...+..+++.+. .++.+|||+|||+|..+..+++. ++.+|+|+|+|+.+++.++++++..+++ +++++++|+.+..+
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~ 173 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALA 173 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGT
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcc
Confidence 345566777765 56789999999999999999976 6789999999999999999999988885 79999999987544
Q ss_pred CCCCCEEEEccch-------------hhhCH----------hhHHHHHHHHhcccccCcEEEEE
Q 048309 134 AKKYDRIISCEMM-------------EAVGH----------EYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 134 ~~~fD~I~~~~~l-------------~~~~~----------~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.++||+|+++..+ +|.+. .....+++++.++|+|||.+++.
T Consensus 174 ~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 5789999998432 22211 35688999999999999999985
No 145
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.61 E-value=3.8e-15 Score=124.09 Aligned_cols=115 Identities=18% Similarity=0.146 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ 130 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 130 (288)
.....+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++.++++++++|+.+
T Consensus 43 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 119 (210)
T 3c3p_A 43 QTGRLLYLLARI---KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLG 119 (210)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHH
Confidence 344444444443 25679999999999999999987 3 689999999999999999999988886679999999976
Q ss_pred C-C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 131 L-P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 131 ~-~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
. + .++ ||+|++.... .+...+++++.++|+|||++++.+.
T Consensus 120 ~~~~~~~-fD~v~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 120 IAAGQRD-IDILFMDCDV-----FNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp HHTTCCS-EEEEEEETTT-----SCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred HhccCCC-CCEEEEcCCh-----hhhHHHHHHHHHhcCCCeEEEEECc
Confidence 4 3 345 9999987432 4568899999999999999998654
No 146
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.61 E-value=2.8e-15 Score=143.09 Aligned_cols=110 Identities=16% Similarity=0.211 Sum_probs=92.0
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCCCCCEEEEccc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAKKYDRIISCEM 145 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~~fD~I~~~~~ 145 (288)
.+.+|||||||+|.++..+|+. |++|+|||+++.+++.|+..+.+.|. .++++.+++++++. .+++||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPD-FAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTT-SEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCC-CceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 5679999999999999999996 89999999999999999999988874 27999999999873 4679999999999
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
++|++..+....+..+.+.|+++|..++..+...+
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~~e 178 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCCTT
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEEecccc
Confidence 99994333233455677889999988887665443
No 147
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.61 E-value=3.6e-16 Score=129.95 Aligned_cols=117 Identities=15% Similarity=0.151 Sum_probs=75.2
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 55 MRKHSLLIEKARV-SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 55 ~~~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
...+..+++.+.. .++.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.+++++...++ +++++++|+.+..
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~ 92 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWL 92 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhh
Confidence 3455667777765 67889999999999999999987 467999999999999999999988776 7899999998732
Q ss_pred CC-----CCCCEEEEccchhh------hCHhh------------------HHHHHHHHhcccccCcEEEE
Q 048309 133 KA-----KKYDRIISCEMMEA------VGHEY------------------MEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 133 ~~-----~~fD~I~~~~~l~~------~~~~~------------------~~~~l~~~~~~LkpgG~l~~ 173 (288)
.. ++||+|+++..+.+ ++... ...+++++.++|+|||.+++
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 43 89999999755432 21111 27889999999999999444
No 148
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.61 E-value=1.2e-14 Score=131.36 Aligned_cols=112 Identities=14% Similarity=0.126 Sum_probs=95.0
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 59 SLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 59 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
..+++.+. ..+..+|||||||+|.++..+++. ++.+++++|+ +.+++.+++. ++++++.+|+.+ +.+..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~~ 260 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPSG 260 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCCC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCCC
Confidence 45666665 667889999999999999999987 7889999999 8888766532 479999999987 52233
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
|+|++..++|++++++...+++++++.|+|||++++.+...++
T Consensus 261 -D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 261 -DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp -SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred -CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999999998888889999999999999999998877654
No 149
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.61 E-value=3.3e-15 Score=130.17 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=90.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
+++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.++++++++|+.++...++||+|++....
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV- 202 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS-
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch-
Confidence 4688999999999999999998733379999999999999999999999976799999999998777899999996442
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
....++.++.++|+|||.+++.+..
T Consensus 203 -----~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 203 -----RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -----hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 2356888899999999999997765
No 150
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.60 E-value=2.6e-16 Score=131.88 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=86.2
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHH----HHcCCCCceEEEEcccCCCC-CCC
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKV----NEAGLQDHIRLYLCDYRQLP-KAK 135 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~----~~~g~~~~v~~~~~d~~~~~-~~~ 135 (288)
++.+...++.+|||||||+|.++..+++. ++.+|+|+|+|+.|++.+.+.+ ...++ ++++++++|+.+++ ..+
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~ 98 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSG 98 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCC
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCC
Confidence 44445678889999999999999999987 5789999999999888643333 34555 48999999999988 445
Q ss_pred CCCEEEEccc---h--hhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEM---M--EAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~---l--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+ |.|+.... . +|+ .+...+++++.++|||||.+++...
T Consensus 99 ~-d~v~~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (218)
T 3mq2_A 99 V-GELHVLMPWGSLLRGVL--GSSPEMLRGMAAVCRPGASFLVALN 141 (218)
T ss_dssp E-EEEEEESCCHHHHHHHH--TSSSHHHHHHHHTEEEEEEEEEEEE
T ss_pred C-CEEEEEccchhhhhhhh--ccHHHHHHHHHHHcCCCcEEEEEec
Confidence 5 77764432 2 255 4558899999999999999999543
No 151
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=2.1e-15 Score=130.09 Aligned_cols=113 Identities=14% Similarity=0.229 Sum_probs=92.8
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCceEEEEcccCCCC-----
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE---AGLQDHIRLYLCDYRQLP----- 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~---~g~~~~v~~~~~d~~~~~----- 132 (288)
...+...++.+|||+|||+|.++..+++. ++.+|+|+|+++.+++.|+++++. +++.++++++++|+.+..
T Consensus 29 ~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 29 ASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp HHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHH
T ss_pred HHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhh
Confidence 34456667889999999999999999987 567999999999999999999988 888667999999999871
Q ss_pred ---CCCCCCEEEEccchhhh----------------CHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 ---KAKKYDRIISCEMMEAV----------------GHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ---~~~~fD~I~~~~~l~~~----------------~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..++||+|+++..+... .......+++.+.++|+|||.+++.
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 35789999998544321 1234678999999999999999984
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.60 E-value=2.3e-15 Score=128.96 Aligned_cols=120 Identities=9% Similarity=0.053 Sum_probs=94.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHc---CCCCc---------
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEA---GLQDH--------- 120 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~---g~~~~--------- 120 (288)
..+..+++.+...++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|++++... ++..+
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~ 117 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSE 117 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhh
Confidence 44556666665456789999999999999999875 3568999999999999999887765 43212
Q ss_pred ----------------eE-------------EEEcccCCCC------CCCCCCEEEEccchhhhC-------HhhHHHHH
Q 048309 121 ----------------IR-------------LYLCDYRQLP------KAKKYDRIISCEMMEAVG-------HEYMEEYF 158 (288)
Q Consensus 121 ----------------v~-------------~~~~d~~~~~------~~~~fD~I~~~~~l~~~~-------~~~~~~~l 158 (288)
++ ++++|+.+.. ...+||+|+++..+.+.. .+....++
T Consensus 118 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l 197 (250)
T 1o9g_A 118 RFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLL 197 (250)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHH
T ss_pred hcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHH
Confidence 56 9999998754 234899999987766542 25577899
Q ss_pred HHHhcccccCcEEEEEe
Q 048309 159 GCCESLLAKDGLLVLQF 175 (288)
Q Consensus 159 ~~~~~~LkpgG~l~~~~ 175 (288)
+++.++|+|||++++..
T Consensus 198 ~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 198 RSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHSCTTCEEEEEE
T ss_pred HHHHHhcCCCcEEEEeC
Confidence 99999999999999843
No 153
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.60 E-value=1.6e-15 Score=121.73 Aligned_cols=105 Identities=18% Similarity=0.276 Sum_probs=85.7
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C----CCCCCCEEEEc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P----KAKKYDRIISC 143 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~----~~~~fD~I~~~ 143 (288)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++++..++ +++++++|+.+. + ..++||+|++.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 6789999999999999999986 56799999999999999999998876 799999999874 2 13489999998
Q ss_pred cchhhhCHhhHHHHHHHHh--cccccCcEEEEEeecCCC
Q 048309 144 EMMEAVGHEYMEEYFGCCE--SLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~~~ 180 (288)
.+++ - ....+++.+. ++|+|||.+++.+.....
T Consensus 118 ~~~~-~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 118 PPYA-M---DLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CCTT-S---CTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCCc-h---hHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 7765 2 2234455555 999999999998765443
No 154
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.60 E-value=8e-16 Score=131.43 Aligned_cols=120 Identities=18% Similarity=0.134 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc
Q 048309 51 KVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY 128 (288)
Q Consensus 51 ~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 128 (288)
...+.+.+..++... ++.+|||||||+|..+..+++. .+.+|+++|+++.+++.|+++++..|+.++++++++|+
T Consensus 45 ~~~~~~~l~~l~~~~---~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda 121 (242)
T 3r3h_A 45 APEQAQFMQMLIRLT---RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPA 121 (242)
T ss_dssp CHHHHHHHHHHHHHH---TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCH
T ss_pred CHHHHHHHHHHHhhc---CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCH
Confidence 345556666665543 4679999999999999999986 36799999999999999999999999977999999999
Q ss_pred CCCC--C-----CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 129 RQLP--K-----AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 129 ~~~~--~-----~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.+.. . .++||+|++.... .+...+++++.++|+|||++++.+...
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDADK-----TNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESCG-----GGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCCh-----HHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 7653 2 5899999987652 456789999999999999999976553
No 155
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.60 E-value=1.4e-14 Score=125.72 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=86.3
Q ss_pred CCCEEEEECCcccH----HHHHHHHc-c----CCEEEEEcCCHHHHHHHHHHHHH-----------------------cC
Q 048309 69 KEHEVLEIGCGWGT----FAIEVVRQ-T----GCNYTGITLSAEQMKYAEMKVNE-----------------------AG 116 (288)
Q Consensus 69 ~~~~vLDiGcG~G~----~~~~la~~-~----~~~v~giD~s~~~~~~a~~~~~~-----------------------~g 116 (288)
++.+|||+|||||. +++.+++. + +.+|+|+|+|+.+++.|++.+.. .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 66666664 3 36899999999999999986410 00
Q ss_pred -------CCCceEEEEcccCCCC-C-CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 117 -------LQDHIRLYLCDYRQLP-K-AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 117 -------~~~~v~~~~~d~~~~~-~-~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
+..+++|.++|+.+.+ + .++||+|+|.+++.|++++...++++++++.|+|||.+++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 0136999999999854 2 5789999999999999877889999999999999999998
No 156
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.59 E-value=8.4e-15 Score=124.64 Aligned_cols=117 Identities=14% Similarity=0.096 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
..+.+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..|+.++++++++|+.
T Consensus 56 ~~~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 132 (237)
T 3c3y_A 56 PLAGQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAM 132 (237)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 4455555555554 35679999999999999999987 3 68999999999999999999999998778999999997
Q ss_pred CCC--C------CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 130 QLP--K------AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 130 ~~~--~------~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+.. . .++||+|++.... .+...+++++.++|+|||++++.+.
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~~~-----~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDADK-----PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred HHHHHHHhccCCCCCcCEEEECCch-----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 642 1 5789999987432 4568899999999999999998654
No 157
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.59 E-value=7.1e-15 Score=126.64 Aligned_cols=128 Identities=9% Similarity=0.024 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCEEEEECCcc--cHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEE
Q 048309 51 KVAQMRKHSLLIEKARV-SKEHEVLEIGCGW--GTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYL 125 (288)
Q Consensus 51 ~~a~~~~~~~l~~~~~~-~~~~~vLDiGcG~--G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~ 125 (288)
..+.+.++.+.++.+.. ....+|||||||+ +.++..+++. ++++|+++|.|+.|++.|++++...+. .++++++
T Consensus 59 a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~ 137 (277)
T 3giw_A 59 MRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVE 137 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEE
T ss_pred HHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEE
Confidence 34556667777777653 2446899999997 4445555554 788999999999999999998865432 4799999
Q ss_pred cccCCCC-----C--CCCCC-----EEEEccchhhhCHhh-HHHHHHHHhcccccCcEEEEEeecCC
Q 048309 126 CDYRQLP-----K--AKKYD-----RIISCEMMEAVGHEY-MEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 126 ~d~~~~~-----~--~~~fD-----~I~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+|+.+.. + .+.|| +|+++.++||+++.+ +..+++++.+.|+|||+|++++.+..
T Consensus 138 aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 138 ADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred ecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 9998852 1 35566 688999999996544 68999999999999999999887754
No 158
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.59 E-value=3.9e-15 Score=126.57 Aligned_cols=108 Identities=15% Similarity=0.255 Sum_probs=84.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH------cCCCCceEEEEcccCC-CC---CCC
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE------AGLQDHIRLYLCDYRQ-LP---KAK 135 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~------~g~~~~v~~~~~d~~~-~~---~~~ 135 (288)
..++.+|||||||+|.++..+++. ++..|+|+|+|+.+++.|+++++. .++ .|++++++|+.+ ++ +++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCc
Confidence 346679999999999999999987 678999999999999999988764 345 589999999987 43 468
Q ss_pred CCCEEEEccchhhhCHh------hHHHHHHHHhcccccCcEEEEEe
Q 048309 136 KYDRIISCEMMEAVGHE------YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+||.|++.+...+.... ....+++++.++|||||.+++.+
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99999987654433100 01479999999999999999864
No 159
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.59 E-value=4e-15 Score=133.46 Aligned_cols=115 Identities=17% Similarity=0.267 Sum_probs=97.0
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
..+++.+...++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.++++++..++. ++++.+|+.+.. +++|
T Consensus 186 ~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~-~~~f 262 (343)
T 2pjd_A 186 QLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV-KGRF 262 (343)
T ss_dssp HHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-CSCE
T ss_pred HHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-cCCe
Confidence 45666665556779999999999999999987 4569999999999999999999988863 678899987765 5789
Q ss_pred CEEEEccchhh---hCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 138 DRIISCEMMEA---VGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 138 D~I~~~~~l~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
|+|+++.++++ ........+++++.++|+|||.+++...
T Consensus 263 D~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 263 DMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred eEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 99999988875 2236778999999999999999999654
No 160
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.59 E-value=1e-15 Score=129.29 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=81.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCC-HHHHHHH---HHHHHHcCCCCceEEEEcccCCCCC--CCCCCEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLS-AEQMKYA---EMKVNEAGLQDHIRLYLCDYRQLPK--AKKYDRI 140 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s-~~~~~~a---~~~~~~~g~~~~v~~~~~d~~~~~~--~~~fD~I 140 (288)
.++.+|||||||+|.++..+++. ++.+|+|+|+| +.|++.| ++++...+++ +++++++|+.+++. .+.+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 47789999999999999999965 67899999999 6666666 7777777874 89999999999862 2455555
Q ss_pred EEccchhhh---CHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 141 ISCEMMEAV---GHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 141 ~~~~~l~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++.....+. ...+...+++++.++|||||.+++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 555433221 00123578999999999999999843
No 161
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.58 E-value=4.7e-15 Score=128.90 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=90.9
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCceEEEEcccCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEA-GLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~-g~~~~v~~~~~d~~~~~~~~ 135 (288)
..+++.+.+.++.+|||+|||+|..+..+++. ++.+|+|+|+++.+++.++++++.. |. ++++++++|+.+..+++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFISDQ 178 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCCSC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCcCC
Confidence 45677778889999999999999999999886 4689999999999999999999887 75 58999999998844567
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|++ ++ .+...+++++.++|+|||.+++.+.
T Consensus 179 ~fD~Vi~-----~~--~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 179 MYDAVIA-----DI--PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CEEEEEE-----CC--SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CccEEEE-----cC--cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 8999998 34 4557899999999999999999653
No 162
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.58 E-value=1.1e-14 Score=123.43 Aligned_cols=115 Identities=21% Similarity=0.281 Sum_probs=95.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LPKA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~~~ 134 (288)
.....+++.+...++.+|||||||+|.++..+++..+.+|+++|+++.+++.|+++++..+++ +++++.+|+.. ++..
T Consensus 78 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 78 HMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGG
T ss_pred HHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCC
Confidence 345567777788889999999999999999999873379999999999999999999988884 69999999733 2334
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
.+||+|++..+++++.. ++.+.|+|||++++......
T Consensus 157 ~~fD~Ii~~~~~~~~~~--------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIPE--------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CCEEEEEECSBBSSCCH--------HHHHTEEEEEEEEEEECSSS
T ss_pred CCccEEEECCcHHHHHH--------HHHHhcCCCcEEEEEEecCC
Confidence 56999999999988842 57789999999999776543
No 163
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.58 E-value=2.7e-15 Score=135.47 Aligned_cols=105 Identities=20% Similarity=0.238 Sum_probs=88.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.++++|||||||+|.++..+|+....+|++||.|+ +++.|++.++.+|+.++|+++.+|++++..++++|+|++...-.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 36889999999999999988886446899999986 88999999999999889999999999998668999999854322
Q ss_pred hh-CHhhHHHHHHHHhcccccCcEEEE
Q 048309 148 AV-GHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 148 ~~-~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.+ ....+..++....++|+|||.++-
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 22 224678888889999999999874
No 164
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.58 E-value=9.5e-15 Score=132.39 Aligned_cols=112 Identities=15% Similarity=0.166 Sum_probs=93.9
Q ss_pred HHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 59 SLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 59 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
..+++.+. ..++.+|||||||+|.++..+++. +..+++++|+ +.+++.+++ . ++++++.+|+.+ +.+.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~~- 267 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA-SVPQ- 267 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CCCC-
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc-CCCC-
Confidence 45666665 667789999999999999999987 6789999999 999887764 2 469999999987 5223
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
||+|++..+++|++.+....++++++++|+|||++++.+...+.
T Consensus 268 ~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 268 GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPE 311 (372)
T ss_dssp EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECS
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 99999999999997666669999999999999999998876554
No 165
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.58 E-value=2.5e-14 Score=121.86 Aligned_cols=111 Identities=15% Similarity=0.189 Sum_probs=96.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKK 136 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~ 136 (288)
...++..+...++.+|||+|||+|.++..+++. +.+|+++|+++.+++.|+++.+..++..++++..+|+.+.. .+++
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 158 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGI 158 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCc
Confidence 346777788888999999999999999999987 78999999999999999999998888678999999998876 6678
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
||+|++. . .+...+++++.++|+|||.+++...
T Consensus 159 ~D~v~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 159 FHAAFVD-----V--REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp BSEEEEC-----S--SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred ccEEEEC-----C--cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9999984 2 3446788999999999999998653
No 166
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.57 E-value=8.6e-15 Score=125.86 Aligned_cols=103 Identities=17% Similarity=0.213 Sum_probs=88.2
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccch
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMM 146 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l 146 (288)
..++.+|||+|||+|.++..+++. +.+|+|+|+++.+++.++++++.+++. +++..+|+.+..+.++||+|+++...
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALPFGPFDLLVANLYA 194 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGGGCCEEEEEEECCH
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCcCCCCCEEEECCcH
Confidence 457889999999999999999886 559999999999999999999988874 89999998763235789999998665
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++ ..++.++.++|+|||.++++.+.
T Consensus 195 ~~~-----~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 195 ELH-----AALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp HHH-----HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHH-----HHHHHHHHHHcCCCCEEEEEeec
Confidence 544 78899999999999999996543
No 167
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.57 E-value=5.1e-15 Score=125.25 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC----CCCCCC
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ----LPKAKK 136 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~----~~~~~~ 136 (288)
++.+.+.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++++.. .++.++.+|+.+ .+..++
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~ 143 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEK 143 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCC
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCcc
Confidence 55556778899999999999999999987 4479999999999999999887654 589999999988 663478
Q ss_pred CCEEEEccchhhhC-HhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEAVG-HEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
||+|+. +++ +.....+++++.++|+|||.+++.
T Consensus 144 ~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 144 VDVIYE-----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEEE-----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEE-----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999993 331 134477899999999999999996
No 168
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.57 E-value=1.1e-14 Score=123.77 Aligned_cols=117 Identities=20% Similarity=0.147 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
......+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++..+++++++|+.
T Consensus 46 ~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 46 PEEGQFLNILTKI---SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 3444444444433 36789999999999999999987 3 67999999999999999999999888667999999986
Q ss_pred CC-C-C---------------C-CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 130 QL-P-K---------------A-KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 130 ~~-~-~---------------~-~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+. + . + ++||+|++..... ....+++++.++|+|||++++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKE-----NYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG-----GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCCHH-----HHHHHHHHHHHHcCCCeEEEEEcc
Confidence 53 2 1 2 7899999986543 456889999999999999998654
No 169
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.57 E-value=1.3e-14 Score=129.46 Aligned_cols=107 Identities=18% Similarity=0.226 Sum_probs=90.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-ceEEEEcccCCCC-C----CCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQD-HIRLYLCDYRQLP-K----AKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~-~v~~~~~d~~~~~-~----~~~fD~I~ 141 (288)
.++.+|||+|||+|.++..+++. +.+|+++|+|+.+++.|+++++.+++.. +++++++|+.++. . .++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 46789999999999999999986 6699999999999999999999998854 4999999998754 1 57899999
Q ss_pred Eccch----------hhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 142 SCEMM----------EAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 142 ~~~~l----------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.... ++. .++..+++++.++|+|||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 96432 233 56789999999999999998876544
No 170
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.57 E-value=2.3e-14 Score=120.53 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=92.1
Q ss_pred HHHHHHcC--CCCCCEEEEECCcccHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHcCC----CCceEEEEcccCC
Q 048309 59 SLLIEKAR--VSKEHEVLEIGCGWGTFAIEVVRQT--GCNYTGITLSAEQMKYAEMKVNEAGL----QDHIRLYLCDYRQ 130 (288)
Q Consensus 59 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~giD~s~~~~~~a~~~~~~~g~----~~~v~~~~~d~~~ 130 (288)
..+++.+. +.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++...++ ..+++++++|+..
T Consensus 65 ~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 65 AYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCccc
Confidence 34555554 6788999999999999999998863 26999999999999999999887653 3579999999987
Q ss_pred CC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 131 LP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 131 ~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.. ..++||+|++...++++. +++.++|||||++++.....
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESCT
T ss_pred CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 65 467899999998887763 46789999999999976543
No 171
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.57 E-value=1.4e-14 Score=124.09 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=94.4
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-CCCCceEEEEcccCCCC-CC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEA-GLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~-g~~~~v~~~~~d~~~~~-~~ 134 (288)
..++..+...++.+|||+|||+|.++..+++. ++.+|+++|+++.+++.++++++.. |. .++++..+|+.+.+ ++
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~ 164 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLEEAELEE 164 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGGGCCCCT
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchhhcCCCC
Confidence 56777788889999999999999999999987 3679999999999999999999887 73 68999999999885 56
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++||+|++. . .+...+++++.++|+|||.+++.+
T Consensus 165 ~~~D~v~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 165 AAYDGVALD-----L--MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp TCEEEEEEE-----S--SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEEC-----C--cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 789999983 3 344678999999999999999855
No 172
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.56 E-value=1.6e-14 Score=122.31 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=88.5
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC---C-CCC
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL---P-KAK 135 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~-~~~ 135 (288)
++.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+.++++.. .+++++++|+.+. + ..+
T Consensus 70 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 70 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCC
T ss_pred HheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCC
Confidence 34556778899999999999999999987 3479999999999988888887765 4799999999873 3 467
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|++... .+.....++.++.++|||||.+++...
T Consensus 147 ~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 147 MVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 8999999655 224456678899999999999999543
No 173
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.56 E-value=1.6e-14 Score=125.44 Aligned_cols=113 Identities=19% Similarity=0.280 Sum_probs=95.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHc-C-CCCceEEEEcccCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEA-G-LQDHIRLYLCDYRQLP 132 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~-g-~~~~v~~~~~d~~~~~ 132 (288)
....++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+++.+++.|+++++.. | +..+++++++|+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 87 DAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 3456777888889999999999999999999985 4679999999999999999999877 5 4468999999999876
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
++++||+|++. . .++..+++++.++|+|||.+++.+.
T Consensus 167 ~~~~~~D~v~~~-----~--~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLD-----M--LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEE-----S--SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEEC-----C--cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 56789999984 2 2445789999999999999999653
No 174
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.56 E-value=4.8e-14 Score=126.89 Aligned_cols=118 Identities=23% Similarity=0.245 Sum_probs=98.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
...++..+...++.+|||+|||+|.+++.++.. +..+++|+|+++.+++.|+++++..|++ ++++.++|+.+++ +.
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 345666777788899999999999999999986 3479999999999999999999999986 8999999999987 56
Q ss_pred CCCCEEEEccchhhh-C-----HhhHHHHHHHHhcccccCcEEEEEee
Q 048309 135 KKYDRIISCEMMEAV-G-----HEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~-~-----~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
..||+|+++..+... . ...+..+++++.++|+|||.+++.+.
T Consensus 271 ~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 271 PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 779999997654321 0 12347899999999999999999654
No 175
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.56 E-value=3.8e-14 Score=123.61 Aligned_cols=117 Identities=12% Similarity=0.198 Sum_probs=90.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcC-CHHHHHHHHHHH-----HHcCCC----CceEEEE
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITL-SAEQMKYAEMKV-----NEAGLQ----DHIRLYL 125 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~-s~~~~~~a~~~~-----~~~g~~----~~v~~~~ 125 (288)
.....+.......++.+|||+|||+|.++..+++....+|+|+|+ |+.+++.+++++ +..++. +++++..
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~ 145 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVP 145 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEE
Confidence 334445554444578899999999999999988863339999999 899999999999 555553 4788887
Q ss_pred cccCCCC-------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccc---c--CcEEEEE
Q 048309 126 CDYRQLP-------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLA---K--DGLLVLQ 174 (288)
Q Consensus 126 ~d~~~~~-------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lk---p--gG~l~~~ 174 (288)
.|..+.. ..++||+|++..+++|. .+...+++.+.++|+ | ||.+++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 146 YRWGDSPDSLQRCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp CCTTSCTHHHHHHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred ecCCCccHHHHhhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 7765532 25789999999999987 788999999999999 9 9988774
No 176
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.56 E-value=3.2e-14 Score=119.82 Aligned_cols=115 Identities=18% Similarity=0.156 Sum_probs=95.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
.+..+.+.+ +++.+|+|||||+|.+++.+++. +..+|+++|+++.+++.|+++++.+|+.++++++++|..+.. +.
T Consensus 11 RL~~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~ 88 (230)
T 3lec_A 11 RLQKVANYV--PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEA 88 (230)
T ss_dssp HHHHHHTTS--CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG
T ss_pred HHHHHHHhC--CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccc
Confidence 344444443 46789999999999999999987 345899999999999999999999999888999999998866 33
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
.+||+|+..++-. +....++....+.|+++|.|+++...
T Consensus 89 ~~~D~IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 89 DNIDTITICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp GCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred cccCEEEEeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 4799998765433 45688899999999999999997654
No 177
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=3.4e-14 Score=119.38 Aligned_cols=113 Identities=19% Similarity=0.189 Sum_probs=93.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LPKAK 135 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~~~~ 135 (288)
+..+.+.+ +++.+|+|||||+|.+++.+++. +..+|+++|+++.+++.|+++++.+|+.++++++.+|..+ +++..
T Consensus 6 L~~l~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~ 83 (225)
T 3kr9_A 6 LELVASFV--SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETD 83 (225)
T ss_dssp HHHHHTTS--CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHhC--CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCc
Confidence 33444433 46789999999999999999987 4568999999999999999999999998789999999965 44333
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+||+|+..++ +......++..+.+.|+++|+++++..
T Consensus 84 ~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 84 QVSVITIAGM----GGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp CCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred CCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 7999987654 324468899999999999999999765
No 178
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.55 E-value=3e-14 Score=124.50 Aligned_cols=118 Identities=15% Similarity=0.185 Sum_probs=92.1
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
.+..+++.+...++.+|||+|||+|.++..+++.++.+|+|+|+|+.+++.|+++++..++..+++++++|+.+... ++
T Consensus 111 lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~ 189 (284)
T 1nv8_A 111 LVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EK 189 (284)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GG
T ss_pred HHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cc
Confidence 34445554433366799999999999999998865679999999999999999999999987679999999987433 57
Q ss_pred C---CEEEEccchh-----------hhCH------hhHHHHHHHHh-cccccCcEEEEEe
Q 048309 137 Y---DRIISCEMME-----------AVGH------EYMEEYFGCCE-SLLAKDGLLVLQF 175 (288)
Q Consensus 137 f---D~I~~~~~l~-----------~~~~------~~~~~~l~~~~-~~LkpgG~l~~~~ 175 (288)
| |+|+++.... |-+. .+...+++++. +.|+|||.+++..
T Consensus 190 f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 190 FASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp TTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 8 9999973322 2211 11237899999 9999999999853
No 179
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.55 E-value=8.3e-15 Score=125.62 Aligned_cols=119 Identities=18% Similarity=0.158 Sum_probs=86.4
Q ss_pred HHHHHHHHHcCC--CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-
Q 048309 56 RKHSLLIEKARV--SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL- 131 (288)
Q Consensus 56 ~~~~~l~~~~~~--~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~- 131 (288)
..+..+++.+.. .++.+|||+|||+|.++..+++. ++.+|+|+|+|+.+++.|+++++..++..+++++++|+.+.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 129 (254)
T 2h00_A 50 HWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL 129 (254)
T ss_dssp HHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh
Confidence 344444443332 25779999999999999999886 57899999999999999999999999876799999997652
Q ss_pred --C-C---CCCCCEEEEccchhhhCH-------------hhHHHHHHHHhcccccCcEEEEE
Q 048309 132 --P-K---AKKYDRIISCEMMEAVGH-------------EYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 132 --~-~---~~~fD~I~~~~~l~~~~~-------------~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+ . +++||+|+++..+++... .....++.++.++|||||.+.+.
T Consensus 130 ~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 130 MDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp TTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 2 2 268999999876654420 11235678899999999988763
No 180
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.55 E-value=2.4e-14 Score=126.89 Aligned_cols=117 Identities=9% Similarity=0.091 Sum_probs=95.0
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKY 137 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~f 137 (288)
+...+.+.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++++..|++ +++++++|+.+++ ..++|
T Consensus 110 ~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~f 188 (315)
T 1ixk_A 110 PPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEF 188 (315)
T ss_dssp HHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCE
T ss_pred HHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccC
Confidence 345567788999999999999999999986 2479999999999999999999999984 7999999999876 46789
Q ss_pred CEEEEccc------hhhhC-------H-------hhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 138 DRIISCEM------MEAVG-------H-------EYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 138 D~I~~~~~------l~~~~-------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
|+|++... +.+.+ . .....+++++.++|||||++++++.+.
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 99998533 22211 0 112588999999999999999987654
No 181
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.55 E-value=3.9e-14 Score=120.22 Aligned_cols=114 Identities=17% Similarity=0.163 Sum_probs=94.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC-CC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK-AK 135 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-~~ 135 (288)
+..+.+.+ +++.+|||||||+|.+++.+++. +..+|+++|+++.+++.|+++++.+|+.++++++++|..+... ..
T Consensus 12 L~~i~~~v--~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~ 89 (244)
T 3gnl_A 12 LEKVASYI--TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKD 89 (244)
T ss_dssp HHHHHTTC--CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHhC--CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccc
Confidence 34444443 46789999999999999999987 3458999999999999999999999998789999999988663 34
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+||+|++.++ +.+....++....+.|+++|.|+++...
T Consensus 90 ~~D~Iviagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 90 AIDTIVIAGM----GGTLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp CCCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred cccEEEEeCC----chHHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 6999987544 3345688899999999999999997653
No 182
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.54 E-value=1.4e-14 Score=125.87 Aligned_cols=116 Identities=16% Similarity=0.149 Sum_probs=94.8
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC-----C
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG-CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK-----A 134 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-----~ 134 (288)
...+.+.++.+|||+|||+|..+..+++. .+ .+|+++|+++.+++.++++++..|++ +++++++|+.+++. .
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~ 154 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNE 154 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTT
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhcc
Confidence 34456778999999999999999999985 34 79999999999999999999999985 89999999987652 6
Q ss_pred CCCCEEEEccchhhhC----------------HhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 135 KKYDRIISCEMMEAVG----------------HEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~----------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
++||+|++...+...+ ......+++++.++|||||++++++.+.
T Consensus 155 ~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 155 IFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp CCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 7899999974332210 0235789999999999999999987654
No 183
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.54 E-value=2.5e-14 Score=124.34 Aligned_cols=110 Identities=17% Similarity=0.200 Sum_probs=95.1
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
..++..+.+.++.+|||+|||+|.++..+++. ++.+|+++|+++.+++.|+++++..++.++++++.+|+.+..++++
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 181 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKD 181 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCS
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCc
Confidence 46777788889999999999999999999886 3679999999999999999999988876689999999987654568
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
||+|++.. .+...+++++.++|+|||.+++.+
T Consensus 182 ~D~V~~~~-------~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 182 VDALFLDV-------PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp EEEEEECC-------SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECC-------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999842 344678999999999999999865
No 184
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.54 E-value=2.9e-14 Score=120.07 Aligned_cols=106 Identities=20% Similarity=0.143 Sum_probs=86.5
Q ss_pred HHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----CCCC
Q 048309 62 IEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----PKAK 135 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~~~~ 135 (288)
++.+.+.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++++.. .+++++++|+.+. +..+
T Consensus 66 l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~ 142 (227)
T 1g8a_A 66 LKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVP 142 (227)
T ss_dssp CCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCC
T ss_pred HHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccC
Confidence 34444778899999999999999999986 2479999999999999999887654 4799999999873 2346
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+||+|++... .+.....+++++.++|||||.+++.
T Consensus 143 ~~D~v~~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 143 KVDVIFEDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CceEEEECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8999998755 1134456699999999999999986
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.54 E-value=3.1e-14 Score=119.83 Aligned_cols=112 Identities=13% Similarity=0.230 Sum_probs=91.9
Q ss_pred HHHHHHc--CCCCCCEEEEECCcccHHHHHHHHccC------CEEEEEcCCHHHHHHHHHHHHHcCC----CCceEEEEc
Q 048309 59 SLLIEKA--RVSKEHEVLEIGCGWGTFAIEVVRQTG------CNYTGITLSAEQMKYAEMKVNEAGL----QDHIRLYLC 126 (288)
Q Consensus 59 ~~l~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~------~~v~giD~s~~~~~~a~~~~~~~g~----~~~v~~~~~ 126 (288)
..+++.+ .+.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.|+++++..++ ..+++++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3445555 467889999999999999999998633 5999999999999999999988773 258999999
Q ss_pred ccCCCC-----CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 127 DYRQLP-----KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 127 d~~~~~-----~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
|+.+.. ..++||+|++...++++ ++++.+.|+|||++++.....
T Consensus 148 d~~~~~~~~~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~~ 196 (227)
T 2pbf_A 148 NIYQVNEEEKKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEED 196 (227)
T ss_dssp CGGGCCHHHHHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEET
T ss_pred ChHhcccccCccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEccC
Confidence 998742 34789999999888876 256789999999999977653
No 186
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=2.6e-14 Score=124.07 Aligned_cols=106 Identities=15% Similarity=0.185 Sum_probs=91.4
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEcc
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCE 144 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~ 144 (288)
.+.++.+|||+|||+|.++..+++. ...+|+|+|+++.+++.|+++++.++++ ++.++++|+.+.+..++||+|++..
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~~~~~D~Vi~d~ 194 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVELKDVADRVIMGY 194 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCCTTCEEEEEECC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCccCCceEEEECC
Confidence 3567889999999999999999987 4569999999999999999999999984 7999999999874346899999986
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.. ....++.++.+.|+|||.+++.+...
T Consensus 195 p~------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 195 VH------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CS------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cc------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 54 34568888899999999999987654
No 187
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.53 E-value=3.7e-14 Score=121.19 Aligned_cols=107 Identities=16% Similarity=0.328 Sum_probs=84.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--------CCCCceEEEEcccCC-CC---CC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA--------GLQDHIRLYLCDYRQ-LP---KA 134 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~--------g~~~~v~~~~~d~~~-~~---~~ 134 (288)
.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.++++++.. ++ .+++++++|+.+ ++ ..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhccc
Confidence 46789999999999999999987 5679999999999999999998776 66 489999999987 33 35
Q ss_pred CCCCEEEEccchhhhCHh------hHHHHHHHHhcccccCcEEEEEe
Q 048309 135 KKYDRIISCEMMEAVGHE------YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+++|.|+....-.+.... ....+++++.++|+|||.+++.+
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 789999865432221000 01589999999999999999843
No 188
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.53 E-value=5.6e-14 Score=118.83 Aligned_cols=104 Identities=16% Similarity=0.122 Sum_probs=81.5
Q ss_pred cCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCC
Q 048309 65 ARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYD 138 (288)
Q Consensus 65 ~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD 138 (288)
+.++++.+|||+|||+|..+..+++. +..+|+|+|+++.+++...+..+.. .|+.++++|+.... ..++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 44889999999999999999999886 4569999999999986665555443 48999999997643 346899
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|++..+.. .....+...+.+.|||||.+++..
T Consensus 149 ~I~~d~a~~----~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 149 VLYVDIAQP----DQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEECCCCT----THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecCCCh----hHHHHHHHHHHHhCCCCeEEEEEE
Confidence 999986541 333445566677999999999963
No 189
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.53 E-value=2.8e-14 Score=120.91 Aligned_cols=118 Identities=22% Similarity=0.216 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 52 VAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 52 ~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
..+.+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++.++++++++|+.
T Consensus 58 ~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 134 (232)
T 3cbg_A 58 PEQAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPAL 134 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444555555543 25679999999999999999987 3 57999999999999999999998888768999999986
Q ss_pred CC-C----CC--CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 130 QL-P----KA--KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 130 ~~-~----~~--~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+. + .+ ++||+|++.... .+...+++++.++|+|||++++.+..
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDADK-----RNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSCG-----GGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred HHHHHHHhcCCCCCcCEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 53 1 12 789999987652 45688999999999999999996644
No 190
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.53 E-value=2.7e-14 Score=120.45 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=91.4
Q ss_pred HHHHHHHc--CCCCCCEEEEECCcccHHHHHHHHccC-------CEEEEEcCCHHHHHHHHHHHHHcC-----CCCceEE
Q 048309 58 HSLLIEKA--RVSKEHEVLEIGCGWGTFAIEVVRQTG-------CNYTGITLSAEQMKYAEMKVNEAG-----LQDHIRL 123 (288)
Q Consensus 58 ~~~l~~~~--~~~~~~~vLDiGcG~G~~~~~la~~~~-------~~v~giD~s~~~~~~a~~~~~~~g-----~~~~v~~ 123 (288)
...+++.+ .+.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++...+ . .++++
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~v~~ 149 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS-GQLLI 149 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH-TSEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC-CceEE
Confidence 34556666 467889999999999999999988622 599999999999999999987755 3 47999
Q ss_pred EEcccCCCC-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 124 YLCDYRQLP-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 124 ~~~d~~~~~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.+|..+.. ..++||+|++...++++. +++.+.|||||++++....
T Consensus 150 ~~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 150 VEGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred EECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 999998733 337899999999988873 5678999999999997654
No 191
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.53 E-value=3.2e-14 Score=119.89 Aligned_cols=117 Identities=17% Similarity=0.146 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ 130 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 130 (288)
...+.+..++.. .++.+|||||||+|..+..+++. + +.+|+++|+++.+++.|+++++..++..+++++++|+.+
T Consensus 56 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 56 EQAQLLANLARL---IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 334444444443 35779999999999999999986 3 679999999999999999999999887789999999866
Q ss_pred CC---C-C---CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 131 LP---K-A---KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 131 ~~---~-~---~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
.. . . ++||+|++... ......+++++.++|+|||++++.+..
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HHHHHHhcCCCCCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 42 1 1 78999999754 245678999999999999999986543
No 192
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.52 E-value=1.9e-14 Score=116.12 Aligned_cols=96 Identities=13% Similarity=0.094 Sum_probs=79.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.++.+|||+|||+|.++..+++. + +|+|+|+|+.+++. ..+++++++|+.+...+++||+|+++..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-~-~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-N-TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNPPYV 89 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-S-EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECCCCB
T ss_pred CCCCeEEEeccCccHHHHHHHhc-C-cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECCCCc
Confidence 45679999999999999999986 5 99999999999987 247899999998844558999999998887
Q ss_pred hhCHh-------hHHHHHHHHhcccccCcEEEEEee
Q 048309 148 AVGHE-------YMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 148 ~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+.+.. +...+++++.+.| |||.+++...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 90 PDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp TTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred cCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 64322 3456788888888 9999998664
No 193
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=6e-15 Score=124.39 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=78.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc-CCCC-C-CCCCCEEEEcc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY-RQLP-K-AKKYDRIISCE 144 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~-~~~~-~-~~~fD~I~~~~ 144 (288)
.++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.++++ . .+++++++|+ ..++ . +++||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~~~~~~~fD~v~~~- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN-----A-PHADVYEWNGKGELPAGLGAPFGLIVSR- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH-----C-TTSEEEECCSCSSCCTTCCCCEEEEEEE-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh-----C-CCceEEEcchhhccCCcCCCCEEEEEeC-
Confidence 57789999999999999999987 78999999999999999987 1 4799999999 4565 4 6899999997
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
.+...+++++.++|||||.++
T Consensus 119 -------~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 -------RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -------SCCSGGGGGHHHHEEEEEEEE
T ss_pred -------CCHHHHHHHHHHHcCCCcEEE
Confidence 245677889999999999999
No 194
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.52 E-value=6.7e-14 Score=122.73 Aligned_cols=109 Identities=21% Similarity=0.278 Sum_probs=83.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC---C-CCceEEEEcccCCCC--CCCCCCEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAG---L-QDHIRLYLCDYRQLP--KAKKYDRI 140 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g---~-~~~v~~~~~d~~~~~--~~~~fD~I 140 (288)
.++.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++...+ + .++++++.+|+.+.. ..++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 35679999999999999999987 55789999999999999999876542 1 248999999998864 46789999
Q ss_pred EEccchhhhCHhhH--HHHHHHHhcccccCcEEEEEee
Q 048309 141 ISCEMMEAVGHEYM--EEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 141 ~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
++.......+.... .++++.+.+.|+|||++++...
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 99765433222222 7899999999999999998653
No 195
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.52 E-value=4.5e-14 Score=121.92 Aligned_cols=97 Identities=19% Similarity=0.272 Sum_probs=82.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEM 145 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~ 145 (288)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++++. .++.+..+|+.+++ .+++||+|++..+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 57789999999999999999987 5789999999999999998764 36899999999887 6689999998765
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
. .+++++.++|||||.+++.+....
T Consensus 158 ~---------~~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 158 P---------CKAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp C---------CCHHHHHHHEEEEEEEEEEEECTT
T ss_pred h---------hhHHHHHHhcCCCcEEEEEEcCHH
Confidence 2 246888999999999999876543
No 196
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=2.3e-14 Score=126.23 Aligned_cols=125 Identities=19% Similarity=0.189 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHH----cCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc
Q 048309 52 VAQMRKHSLLIEK----ARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC 126 (288)
Q Consensus 52 ~a~~~~~~~l~~~----~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 126 (288)
..+.+.+.+.+.. ....+..+|||||||+|.++..+++. ++.+|++||+++.+++.|++++.... ..+++++++
T Consensus 68 ~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~ 146 (317)
T 3gjy_A 68 FEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVD 146 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEES
T ss_pred hHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEEC
Confidence 3455555555543 22112349999999999999999985 77899999999999999999875432 258999999
Q ss_pred ccCCCC---CCCCCCEEEEccchhhhCHhh--HHHHHHHHhcccccCcEEEEEeec
Q 048309 127 DYRQLP---KAKKYDRIISCEMMEAVGHEY--MEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 127 d~~~~~---~~~~fD~I~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|+.++. .+++||+|++........+.. ..++++.+.++|+|||++++....
T Consensus 147 Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 147 DARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 998753 357899999965433211112 268999999999999999997754
No 197
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.51 E-value=6.6e-14 Score=123.47 Aligned_cols=109 Identities=21% Similarity=0.187 Sum_probs=84.6
Q ss_pred CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH---cCCCCceEEEEcccCCCC---CCCCCCE
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE---AGLQDHIRLYLCDYRQLP---KAKKYDR 139 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~---~g~~~~v~~~~~d~~~~~---~~~~fD~ 139 (288)
..++.+|||||||+|..+..+++. +..+|+++|+++.+++.|++++.. .....+++++.+|+.++. .+++||+
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 356789999999999999999987 457999999999999999998742 112357999999998764 3678999
Q ss_pred EEEccchhhhCHhhH--HHHHHHHhcccccCcEEEEEe
Q 048309 140 IISCEMMEAVGHEYM--EEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 140 I~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|++.....+.+.... .++++++.++|+|||++++..
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999876654322222 689999999999999999864
No 198
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.50 E-value=6.8e-14 Score=121.37 Aligned_cols=110 Identities=15% Similarity=0.237 Sum_probs=92.9
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
++.+.. ++|.+|||+|||+|.++..+|+...++|+++|++|.+++.++++++.+++.++++++++|..++...+.||.
T Consensus 118 ri~~~~--~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~ 195 (278)
T 3k6r_A 118 RMAKVA--KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADR 195 (278)
T ss_dssp HHHHHC--CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEE
T ss_pred HHHHhc--CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCE
Confidence 445543 478999999999999999999875579999999999999999999999998889999999999887789999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
|++..... ...++..+.++|++||.+.+.++.
T Consensus 196 Vi~~~p~~------~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 196 ILMGYVVR------THEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEECCCSS------GGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEECCCCc------HHHHHHHHHHHcCCCCEEEEEeee
Confidence 99874322 235667777899999998876654
No 199
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.50 E-value=9.1e-15 Score=131.76 Aligned_cols=135 Identities=17% Similarity=0.128 Sum_probs=100.3
Q ss_pred CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHHcCCCCCCEEEEECCc------ccHHHHHHHHc--cCCEEEEEcC
Q 048309 29 NSLAQAHRNISYHYDLDEDEDLKVAQMRKHSLLIEKARVSKEHEVLEIGCG------WGTFAIEVVRQ--TGCNYTGITL 100 (288)
Q Consensus 29 ~~~~~~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG------~G~~~~~la~~--~~~~v~giD~ 100 (288)
+.....++.++..|+...... .......+..+++.+.. ++.+||||||| +|..+..+++. ++++|+|+|+
T Consensus 178 ~s~~~~fd~lA~~Y~tDK~~~-~h~y~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDi 255 (419)
T 3sso_A 178 GSRKPDLSELSSRYFTPKFGF-LHWFTPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDI 255 (419)
T ss_dssp SCCCCCHHHHHHHTTCTTBSS-SCBCHHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEES
T ss_pred cCCCccHHHHHHHhCCCcccc-cchHHHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEEC
Confidence 344567999999998642210 00122344555655543 46799999999 77777777765 6789999999
Q ss_pred CHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C------CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 101 SAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K------AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 101 s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~------~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
|+.|.. . ..+++++++|+.+++ . .++||+|++..+ ++. .+...++++++++|||||++++
T Consensus 256 Sp~m~~---------~-~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 256 MDKSHV---------D-ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp SCCGGG---------C-BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEE
T ss_pred CHHHhh---------c-CCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEE
Confidence 999731 1 258999999999876 3 589999999754 555 6788999999999999999999
Q ss_pred EeecC
Q 048309 174 QFSST 178 (288)
Q Consensus 174 ~~~~~ 178 (288)
.++..
T Consensus 323 ~Dl~t 327 (419)
T 3sso_A 323 EDMWT 327 (419)
T ss_dssp ECGGG
T ss_pred Eeccc
Confidence 87653
No 200
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.50 E-value=6e-14 Score=126.16 Aligned_cols=105 Identities=9% Similarity=0.066 Sum_probs=88.7
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEcc
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCE 144 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~ 144 (288)
...++.+|||||||+|..+..+++. ++.+++++|+ +.+++.+++. .+++++.+|+.+ +.+ .||+|++..
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p-~~D~v~~~~ 254 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-------NNLTYVGGDMFT-SIP-NADAVLLKY 254 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-------TTEEEEECCTTT-CCC-CCSEEEEES
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-------CCcEEEeccccC-CCC-CccEEEeeh
Confidence 3456789999999999999999987 6789999999 9998877641 359999999976 422 399999999
Q ss_pred chhhhCHhhHHHHHHHHhccccc---CcEEEEEeecCCC
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAK---DGLLVLQFSSTPD 180 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 180 (288)
++||++......++++++++|+| ||++++.+...+.
T Consensus 255 ~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 255 ILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 99999766666999999999999 9999998876543
No 201
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.49 E-value=1.4e-13 Score=122.90 Aligned_cols=112 Identities=12% Similarity=0.162 Sum_probs=88.9
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcC----------CCCceEEEE
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAG----------LQDHIRLYL 125 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g----------~~~~v~~~~ 125 (288)
...++..+.+.++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|+++++..+ ...++++++
T Consensus 94 ~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 94 INMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 445667778889999999999999999999986 23799999999999999999988632 235899999
Q ss_pred cccCCCC---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 126 CDYRQLP---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 126 ~d~~~~~---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
+|+.+.. ++++||+|++... ....+++++.++|+|||.+++...
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp SCTTCCC-------EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CChHHcccccCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9998863 4568999998532 223478999999999999998654
No 202
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.49 E-value=2.2e-14 Score=122.03 Aligned_cols=108 Identities=12% Similarity=0.082 Sum_probs=85.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-----cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-----TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-----~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
...+..++... ++.+|||||||+|..+..+++. ++++|+|||+++.+++.|+. +..+++++++|+.
T Consensus 70 ~~~l~~~l~~~---~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~------~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 70 QAVYHDMLWEL---RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS------DMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHH---CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG------GCTTEEEEECCSS
T ss_pred HHHHHHHHHhc---CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc------cCCceEEEECcch
Confidence 34455555543 4579999999999999999875 46899999999999988861 2258999999999
Q ss_pred CC---C--CCCCCCEEEEccchhhhCHhhHHHHHHHHhc-ccccCcEEEEEee
Q 048309 130 QL---P--KAKKYDRIISCEMMEAVGHEYMEEYFGCCES-LLAKDGLLVLQFS 176 (288)
Q Consensus 130 ~~---~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 176 (288)
+. + ...+||+|++... | .+...++.++.+ +|||||++++.+.
T Consensus 141 ~~~~l~~~~~~~fD~I~~d~~--~---~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHLREMAHPLIFIDNA--H---ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGGSSSCSSEEEEESS--C---SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhhccCCCCEEEECCc--h---HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 85 4 2347999998765 3 256789999997 9999999999654
No 203
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.49 E-value=1.2e-13 Score=113.96 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=82.5
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-c--CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 57 KHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-T--GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 57 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~--~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
++..+.+.+. +.++.+|||+|||+|.++..+++. + +.+|+|+|+|+.. .. .+++++++|+.+.+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~ 76 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDN 76 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTS
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchh
Confidence 3445566655 467889999999999999999987 4 5799999999831 22 46899999998764
Q ss_pred --------------------------CCCCCCEEEEccchhhhCH--hh-------HHHHHHHHhcccccCcEEEEEeec
Q 048309 133 --------------------------KAKKYDRIISCEMMEAVGH--EY-------MEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 133 --------------------------~~~~fD~I~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++++||+|++..++++.+. .+ ...+++++.++|+|||.+++..+.
T Consensus 77 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 77 MNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp SCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 3468999999877655311 11 234789999999999999986543
No 204
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.48 E-value=1e-13 Score=121.10 Aligned_cols=114 Identities=12% Similarity=0.160 Sum_probs=89.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
.....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++...+..++++++++|+.+++.+
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~- 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP- 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC-
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch-
Confidence 45667888888888999999999999999999987 6799999999999999999987766645899999999987633
Q ss_pred CCCEEEEccchhhhCHhhHHHHHH--------------HH--hcccccCcEEE
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFG--------------CC--ESLLAKDGLLV 172 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~--------------~~--~~~LkpgG~l~ 172 (288)
+||+|+++..++..+ +....++. ++ +++|+|||.++
T Consensus 93 ~fD~vv~nlpy~~~~-~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPYQISS-PFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCGGGHH-HHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCcccch-HHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 799999976655442 22222322 22 35899999764
No 205
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.48 E-value=6.2e-14 Score=112.48 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=86.3
Q ss_pred HHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 57 KHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 57 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.+..+++.+. ..++.+|||+|||+|.++..+++. ++.+++|+|+++ +++. .+++++++|+.+.+
T Consensus 9 ~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~ 76 (180)
T 1ej0_A 9 KLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELV 76 (180)
T ss_dssp HHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHH
T ss_pred HHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchh
Confidence 3445566655 567889999999999999999887 357999999999 6532 37899999998763
Q ss_pred --------CCCCCCEEEEccchhhhCHh---h------HHHHHHHHhcccccCcEEEEEeecC
Q 048309 133 --------KAKKYDRIISCEMMEAVGHE---Y------MEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 133 --------~~~~fD~I~~~~~l~~~~~~---~------~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
++++||+|++..++++.+.. . ...+++++.++|+|||.+++.....
T Consensus 77 ~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 77 MKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred hhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 34789999998877765221 1 1688999999999999999976543
No 206
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.48 E-value=8.6e-14 Score=114.87 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=76.3
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
..+......++.+|||+|||+|.++..+++....+|+|+|+|+.+++.+++++. +++++++|+.+++ ++||+
T Consensus 42 ~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~~~D~ 113 (200)
T 1ne2_A 42 IEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--GKYDT 113 (200)
T ss_dssp HHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC--CCEEE
T ss_pred HHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC--CCeeE
Confidence 333333556788999999999999999998733479999999999999998864 5899999999875 78999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhccc
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLL 165 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~L 165 (288)
|+++.+++|........+++++.+.+
T Consensus 114 v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 114 WIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp EEECCCC-------CHHHHHHHHHHE
T ss_pred EEECCCchhccCchhHHHHHHHHHhc
Confidence 99999999985434457888888888
No 207
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.48 E-value=5.9e-13 Score=110.29 Aligned_cols=107 Identities=10% Similarity=0.096 Sum_probs=86.9
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
..+......++.+|||+|||+|.++..+++....+|+|+|+++.+++.++++++..++ +++++++|+.+++ ++||+
T Consensus 40 ~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~ 115 (207)
T 1wy7_A 40 WLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDI 115 (207)
T ss_dssp HHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSE
T ss_pred HHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCE
Confidence 3344445567889999999999999999987334899999999999999999988876 7999999999875 58999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
|+++..+++........+++++.+.+ |+.++
T Consensus 116 v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 116 VIMNPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp EEECCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred EEEcCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 99998877764444567888888888 55443
No 208
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.47 E-value=1e-13 Score=122.17 Aligned_cols=111 Identities=21% Similarity=0.257 Sum_probs=85.6
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCceEEEEcccCCC-C-CCCCCCE
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE--AGL-QDHIRLYLCDYRQL-P-KAKKYDR 139 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~--~g~-~~~v~~~~~d~~~~-~-~~~~fD~ 139 (288)
....+.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. + .+++||+
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 3446689999999999999999987 457999999999999999998765 333 35899999998764 2 4578999
Q ss_pred EEEccchhhhCHh--hHHHHHHHHhcccccCcEEEEEee
Q 048309 140 IISCEMMEAVGHE--YMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 140 I~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
|++.......+.. ...++++++.++|+|||++++...
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 9997653322111 235789999999999999998653
No 209
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.47 E-value=1.4e-13 Score=125.31 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=89.7
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-ceEEEEcccCCCC-----CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQD-HIRLYLCDYRQLP-----KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~-~v~~~~~d~~~~~-----~~~~fD~I~ 141 (288)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.+ +++++++|+.+.. ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4678999999999999999998633489999999999999999999999865 8999999997742 246899999
Q ss_pred Eccchh-----hhC--HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 142 SCEMME-----AVG--HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 142 ~~~~l~-----~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+..... +.. ...+.+++..+.++|+|||.+++++..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 965431 111 145667889999999999999987643
No 210
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.46 E-value=1.5e-13 Score=123.81 Aligned_cols=111 Identities=10% Similarity=0.095 Sum_probs=90.9
Q ss_pred HHHHHc--CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCC
Q 048309 60 LLIEKA--RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 60 ~l~~~~--~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 136 (288)
.+++.+ ...++.+|||||||+|.++..+++. ++.+++++|+ +.+++.+++ . .+++++.+|+.+ +.+ +
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~-~ 251 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK-SIP-S 251 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT-CCC-C
T ss_pred HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC-CCC-C
Confidence 345544 3446689999999999999999988 6779999999 788876653 2 369999999987 522 5
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhccccc---CcEEEEEeecCCC
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAK---DGLLVLQFSSTPD 180 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 180 (288)
||+|++..++||++.+....+++++.++|+| ||++++.+...+.
T Consensus 252 ~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 252 ADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDE 298 (358)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECT
T ss_pred ceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCC
Confidence 9999999999999766666999999999999 9999998776543
No 211
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=1.6e-13 Score=122.39 Aligned_cols=109 Identities=17% Similarity=0.192 Sum_probs=86.3
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCceEEEEcccCCCC---CCCCCC
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA--GL-QDHIRLYLCDYRQLP---KAKKYD 138 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~~---~~~~fD 138 (288)
....+.+|||||||+|..+..++++ +..+|+++|+|+.+++.|++++... ++ ..+++++++|+.++. .+++||
T Consensus 117 ~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 117 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred hCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 3456789999999999999999987 4679999999999999999987652 33 257999999987642 357899
Q ss_pred EEEEccchhhhCHhh--HHHHHHHHhcccccCcEEEEE
Q 048309 139 RIISCEMMEAVGHEY--MEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|++......-.... ...+++++.++|+|||++++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999965421111121 478999999999999999985
No 212
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.45 E-value=1.9e-13 Score=119.28 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=87.4
Q ss_pred CCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC--C-CCceEEEEcccCCCC--CCCCCCE
Q 048309 66 RVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAG--L-QDHIRLYLCDYRQLP--KAKKYDR 139 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g--~-~~~v~~~~~d~~~~~--~~~~fD~ 139 (288)
...++.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++...+ + .++++++.+|+.+.. ..++||+
T Consensus 75 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 75 VSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred cCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 3446789999999999999999987 46799999999999999999875431 1 258999999998743 4678999
Q ss_pred EEEccchhhhCHhhH--HHHHHHHhcccccCcEEEEEe
Q 048309 140 IISCEMMEAVGHEYM--EEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 140 I~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|++.....+.+.... .++++.+.+.|+|||++++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 999754333222232 689999999999999999853
No 213
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.45 E-value=1.9e-13 Score=121.06 Aligned_cols=110 Identities=20% Similarity=0.254 Sum_probs=88.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cC-C-CCceEEEEcccCCC-C-CCCCCCEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE--AG-L-QDHIRLYLCDYRQL-P-KAKKYDRI 140 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~--~g-~-~~~v~~~~~d~~~~-~-~~~~fD~I 140 (288)
..+.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++.. .+ + .++++++.+|+.+. + .+++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45679999999999999999987 567999999999999999998764 22 2 35899999999874 3 56789999
Q ss_pred EEccchhh---hCHhh--HHHHHHHHhcccccCcEEEEEeec
Q 048309 141 ISCEMMEA---VGHEY--MEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 141 ~~~~~l~~---~~~~~--~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++....+. -+... ..++++++.++|+|||++++....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99866543 11111 378999999999999999997543
No 214
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.45 E-value=8.7e-14 Score=116.02 Aligned_cols=88 Identities=20% Similarity=0.341 Sum_probs=75.5
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccc
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEM 145 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~ 145 (288)
..++.+|||||||+|.++..+ +.+++|+|+|+. +++++++|+.+++ ++++||+|++..+
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 124 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSI----RNPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCLS 124 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHC----CSCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCcCCHHHHHh----hccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEehh
Confidence 356789999999999998876 368999999986 3678999999887 6689999999999
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+++ .+...+++++.++|+|||.+++.+..
T Consensus 125 l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 125 LMG---TNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp CCS---SCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ccc---cCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 963 67899999999999999999997643
No 215
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.44 E-value=1.1e-13 Score=122.50 Aligned_cols=107 Identities=23% Similarity=0.320 Sum_probs=82.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCceEEEEcccCCC-C-CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA--GL-QDHIRLYLCDYRQL-P-KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~-~-~~~~fD~I~ 141 (288)
..+.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. + ..++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35679999999999999999987 5679999999999999999987643 33 35899999999774 2 467899999
Q ss_pred EccchhhhCH-hhH--HHHHHHHhcccccCcEEEEEe
Q 048309 142 SCEMMEAVGH-EYM--EEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 142 ~~~~l~~~~~-~~~--~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+... .++.+ ... .++++++.++|+|||++++..
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 8654 33321 222 689999999999999999864
No 216
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.44 E-value=2e-13 Score=124.68 Aligned_cols=110 Identities=18% Similarity=0.141 Sum_probs=91.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIIS 142 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~ 142 (288)
+++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++.++++++++|+.+.. ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 47889999999999999999986334999999999999999999999998658999999998753 2578999999
Q ss_pred ccchhhhCH-------hhHHHHHHHHhcccccCcEEEEEeec
Q 048309 143 CEMMEAVGH-------EYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 143 ~~~l~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
.......+. .....++.++.++|+|||.+++.+..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 654321111 55778999999999999999887654
No 217
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.44 E-value=9.7e-14 Score=120.92 Aligned_cols=108 Identities=12% Similarity=0.122 Sum_probs=82.2
Q ss_pred HHHHHHHHHcCCC-CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEE-EcccCCCC-
Q 048309 56 RKHSLLIEKARVS-KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLY-LCDYRQLP- 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~-~~d~~~~~- 132 (288)
.++..+++.+.+. ++.+|||+|||||.++..+++....+|+|+|+|+.|++.+.+. . .++... ..|+..+.
T Consensus 71 ~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~---~---~rv~~~~~~ni~~l~~ 144 (291)
T 3hp7_A 71 LKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ---D---DRVRSMEQYNFRYAEP 144 (291)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT---C---TTEEEECSCCGGGCCG
T ss_pred HHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh---C---cccceecccCceecch
Confidence 3677788888765 5679999999999999999887445999999999999875432 1 233322 34554433
Q ss_pred ---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 ---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+..+||+|++..+++++ ..++.++.++|+|||.+++.
T Consensus 145 ~~l~~~~fD~v~~d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 145 VDFTEGLPSFASIDVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp GGCTTCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred hhCCCCCCCEEEEEeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 23459999998887765 67899999999999999985
No 218
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=1.1e-12 Score=118.92 Aligned_cols=104 Identities=16% Similarity=0.243 Sum_probs=88.0
Q ss_pred CCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CC--CCCCCCEEEE
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LP--KAKKYDRIIS 142 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~--~~~~fD~I~~ 142 (288)
..++.+|||+| |+|.++..++.. +..+|+|+|+++.+++.|+++++..|+. +++++++|+.+ ++ .+++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34678999999 999999999886 3469999999999999999999998885 89999999998 65 2468999999
Q ss_pred ccchhhhCHhhHHHHHHHHhcccccCcEE-EEEe
Q 048309 143 CEMMEAVGHEYMEEYFGCCESLLAKDGLL-VLQF 175 (288)
Q Consensus 143 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l-~~~~ 175 (288)
+..+... ....+++++.++|+|||++ ++..
T Consensus 248 ~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 248 DPPETLE---AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCCSSHH---HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCCchH---HHHHHHHHHHHHcccCCeEEEEEE
Confidence 8776544 3588999999999999954 5543
No 219
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.44 E-value=1.1e-12 Score=121.84 Aligned_cols=118 Identities=13% Similarity=0.125 Sum_probs=94.9
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--C-CC
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG-CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--K-AK 135 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~-~~ 135 (288)
+...+.+.++.+|||+|||+|..+..+++. .+ .+|+++|+++.+++.++++++..|+ .+++++++|+.+++ . ++
T Consensus 251 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~ 329 (450)
T 2yxl_A 251 ASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI-KIVKPLVKDARKAPEIIGEE 329 (450)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCTTCCSSSSCSS
T ss_pred HHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC-CcEEEEEcChhhcchhhccC
Confidence 344567788999999999999999999986 34 6999999999999999999999998 47999999998876 2 27
Q ss_pred CCCEEEEcc------chhhhCH-------hh-------HHHHHHHHhcccccCcEEEEEeecCC
Q 048309 136 KYDRIISCE------MMEAVGH-------EY-------MEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 136 ~fD~I~~~~------~l~~~~~-------~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+||+|++.. ++++.+. .+ ...+++++.++|||||++++.+++..
T Consensus 330 ~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 330 VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 899999742 3332211 11 16789999999999999999887643
No 220
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.44 E-value=4.7e-13 Score=130.38 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=91.6
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CceEEEEcccCCCC--CCCCCCEEEEccc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ-DHIRLYLCDYRQLP--KAKKYDRIISCEM 145 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~--~~~~fD~I~~~~~ 145 (288)
++.+|||+|||+|.++..++.....+|+++|+|+.+++.++++++.+++. .+++++++|+.++. ..++||+|++...
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 68899999999999999998863347999999999999999999999986 58999999998843 4578999999753
Q ss_pred -----------hhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 146 -----------MEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 146 -----------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.+. .+...++..+.++|+|||.+++++..
T Consensus 619 ~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2333 67788999999999999999987654
No 221
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.44 E-value=4e-13 Score=122.73 Aligned_cols=110 Identities=18% Similarity=0.129 Sum_probs=91.2
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC-CCceEEEEcccCCCC-----CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL-QDHIRLYLCDYRQLP-----KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~-~~~v~~~~~d~~~~~-----~~~~fD~I~ 141 (288)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.|+++++.+++ +++++++++|+.++. ...+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47789999999999999999986335999999999999999999999998 658999999998753 157899999
Q ss_pred EccchhhhC-------HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 142 SCEMMEAVG-------HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 142 ~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+.......+ ......++.++.+.|+|||.+++++..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 975432110 146788999999999999999987643
No 222
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.43 E-value=1.8e-13 Score=121.57 Aligned_cols=107 Identities=18% Similarity=0.293 Sum_probs=85.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCceEEEEcccCCCC--CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE--AGL-QDHIRLYLCDYRQLP--KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~--~g~-~~~v~~~~~d~~~~~--~~~~fD~I~ 141 (288)
.++.+|||||||+|..+..++++ +..+|+++|+|+.+++.|++++.. .++ .++++++++|+.+.. .+++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35679999999999999999987 568999999999999999998765 223 357999999987742 457899999
Q ss_pred EccchhhhCH-hhH--HHHHHHHhcccccCcEEEEEe
Q 048309 142 SCEMMEAVGH-EYM--EEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 142 ~~~~l~~~~~-~~~--~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+...- +..+ ... .++++++.+.|+|||++++..
T Consensus 195 ~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 87532 2211 222 789999999999999999864
No 223
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.43 E-value=3e-13 Score=114.74 Aligned_cols=104 Identities=9% Similarity=0.149 Sum_probs=92.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccch
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMM 146 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l 146 (288)
.++.+|||||||+|-++..++.. +..+|+++|+++.+++.+++++..+|+ +.++.+.|...-++.+++|++++.-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~--~~~~~v~D~~~~~p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV--PHRTNVADLLEDRLDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC--CEEEEECCTTTSCCCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeeecccCCCCCcchHHHHHHH
Confidence 45779999999999999999877 788999999999999999999999997 489999999988878999999999999
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|+..+.....+ ++.+.|+|+|+++..
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEec
Confidence 999555555666 899999999988864
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.43 E-value=1.6e-13 Score=119.72 Aligned_cols=107 Identities=21% Similarity=0.255 Sum_probs=83.6
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc--CC--------CCceEEEEcccCCCC-CCCC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA--GL--------QDHIRLYLCDYRQLP-KAKK 136 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~--g~--------~~~v~~~~~d~~~~~-~~~~ 136 (288)
..+.+|||||||+|..+..+++++..+|+++|+++.+++.|++++ .. ++ .++++++.+|+.+.. .+++
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 456899999999999999998874469999999999999999987 33 22 358999999986642 2578
Q ss_pred CCEEEEccchhhhCHhh--HHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEY--MEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
||+|++......-+... ..++++++.++|+|||++++..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999976532211122 2788999999999999999864
No 225
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.43 E-value=4.1e-13 Score=124.31 Aligned_cols=117 Identities=12% Similarity=0.096 Sum_probs=94.4
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKK 136 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~ 136 (288)
+...+...++.+|||+|||+|..+..+++. ...+|+++|+|+.+++.++++++..|+. +.++++|+.+++ ..++
T Consensus 93 ~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~ 170 (464)
T 3m6w_A 93 VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTY 170 (464)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSC
T ss_pred HHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhcccc
Confidence 345567788999999999999999999986 2369999999999999999999999984 999999998765 4679
Q ss_pred CCEEEEccch------hhh-------CHh-------hHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 137 YDRIISCEMM------EAV-------GHE-------YMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 137 fD~I~~~~~l------~~~-------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
||+|++.... .+- +++ ....+++.+.++|||||+++.++++..
T Consensus 171 FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 171 FHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp EEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred CCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 9999974322 111 111 227789999999999999999887643
No 226
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.43 E-value=3.6e-13 Score=118.32 Aligned_cols=108 Identities=19% Similarity=0.290 Sum_probs=83.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHH--cCC-CCceEEEEcccCCC-C-CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNE--AGL-QDHIRLYLCDYRQL-P-KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~--~g~-~~~v~~~~~d~~~~-~-~~~~fD~I~ 141 (288)
..+.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++.. .++ .++++++.+|+.+. + ..++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34579999999999999999987 567999999999999999998754 233 25899999998764 3 457899999
Q ss_pred EccchhhhCH-h--hHHHHHHHHhcccccCcEEEEEe
Q 048309 142 SCEMMEAVGH-E--YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 142 ~~~~l~~~~~-~--~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.....++.+ . ...++++++.+.|+|||++++..
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8654321211 1 22689999999999999999864
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.42 E-value=3.6e-13 Score=117.08 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=85.1
Q ss_pred CCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCceEEEEcccCCC-C-CCCCCCEEEE
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA--GL-QDHIRLYLCDYRQL-P-KAKKYDRIIS 142 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~-~-~~~~fD~I~~ 142 (288)
.+.+|||||||+|..+..++++ +..+|+++|+++.+++.|++++... ++ .++++++.+|+.+. + ..++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5679999999999999999987 4579999999999999999987541 33 35899999998774 2 4578999999
Q ss_pred ccchhhhCHh--hHHHHHHHHhcccccCcEEEEEe
Q 048309 143 CEMMEAVGHE--YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 143 ~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.......+.. ...++++++.+.|+|||++++..
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 7554221111 12679999999999999999864
No 228
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=5.3e-13 Score=121.54 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEccc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCEM 145 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~~ 145 (288)
+++.+|||+|||+|.++..+++. ++.|+++|+|+.+++.++++++.+++. .++.++|+.++. ..+.||+|++...
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP 289 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR--VDIRHGEALPTLRGLEGPFHHVLLDPP 289 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--CEEEESCHHHHHHTCCCCEEEEEECCC
T ss_pred cCCCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC--CcEEEccHHHHHHHhcCCCCEEEECCC
Confidence 36899999999999999999986 677999999999999999999999985 356799988753 2345999999754
Q ss_pred hhhhC-------HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 146 MEAVG-------HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 146 l~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
...-+ ......+++.+.++|+|||.+++.+..
T Consensus 290 ~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 290 TLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 31110 145678899999999999999976544
No 229
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.42 E-value=5.5e-13 Score=123.28 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=95.3
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKK 136 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~ 136 (288)
+...+.+.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++++..|+. ++.++++|..++. .+++
T Consensus 97 ~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~ 175 (456)
T 3m4x_A 97 VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGF 175 (456)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTC
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhcccc
Confidence 345567788999999999999999999986 3469999999999999999999999984 7999999998865 4579
Q ss_pred CCEEEEccch------hhh-------CH-------hhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 137 YDRIISCEMM------EAV-------GH-------EYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 137 fD~I~~~~~l------~~~-------~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
||+|++...+ .+- +. .....+++.+.++|||||+++.++++..
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 9999986532 110 00 1123789999999999999999887654
No 230
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=7.5e-13 Score=119.97 Aligned_cols=112 Identities=25% Similarity=0.248 Sum_probs=87.7
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCC
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKY 137 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~f 137 (288)
.++... ..++.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|+++++.+|+.++++++++|+.+++ +.++|
T Consensus 209 ~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~f 287 (373)
T 3tm4_A 209 AMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSV 287 (373)
T ss_dssp HHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCE
T ss_pred HHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCc
Confidence 344444 668889999999999999999987 223899999999999999999999998778999999999988 56899
Q ss_pred CEEEEccchhhhC------HhhHHHHHHHHhcccccCcEEEE
Q 048309 138 DRIISCEMMEAVG------HEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 138 D~I~~~~~l~~~~------~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
|+|+++..+.... ......+++.+.++| +|+.+++
T Consensus 288 D~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 288 DFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp EEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred CEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 9999986643220 022477888888888 3333333
No 231
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.41 E-value=6.5e-13 Score=123.85 Aligned_cols=116 Identities=15% Similarity=0.167 Sum_probs=93.6
Q ss_pred HHcCCC--CCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCC
Q 048309 63 EKARVS--KEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKK 136 (288)
Q Consensus 63 ~~~~~~--~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~ 136 (288)
..+.+. ++.+|||+|||+|..+..+++. ....|+++|+++.+++.++++++..|++ +++++++|+.+++ ..++
T Consensus 109 ~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 109 AALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTC
T ss_pred HHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhcccc
Confidence 445566 8899999999999999999986 2469999999999999999999999984 7999999998875 4578
Q ss_pred CCEEEEccc------hhhhC-------Hh-------hHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 137 YDRIISCEM------MEAVG-------HE-------YMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 137 fD~I~~~~~------l~~~~-------~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
||+|++... +.+.+ ++ ....+++++.++|||||++++++++..
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 999998422 22211 11 135689999999999999999887643
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.41 E-value=4.5e-13 Score=110.17 Aligned_cols=111 Identities=20% Similarity=0.251 Sum_probs=83.6
Q ss_pred HHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C
Q 048309 56 RKHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K 133 (288)
Q Consensus 56 ~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~ 133 (288)
-++..+.+... .+++.+|||+|||+|.++..+++. +.+|+|+|+++.. .+ .+++++++|+.+.+ .
T Consensus 11 ~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~ 77 (191)
T 3dou_A 11 FKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIF 77 (191)
T ss_dssp HHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHH
T ss_pred HHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHH
Confidence 35566666665 467899999999999999999987 7899999999741 23 47999999998864 1
Q ss_pred -------C----CCCCEEEEccchh--------hh-CHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 134 -------A----KKYDRIISCEMME--------AV-GHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 134 -------~----~~fD~I~~~~~l~--------~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
. ++||+|++..... +. .......+++.+.++|||||.|++..+..+
T Consensus 78 ~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~ 143 (191)
T 3dou_A 78 DDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred HHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC
Confidence 1 4999999965321 11 112346788999999999999998766433
No 233
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.41 E-value=1.4e-12 Score=109.59 Aligned_cols=102 Identities=16% Similarity=0.116 Sum_probs=88.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.++.+|||||||+|-++..+. ++.+|+|+|+++.+++.+++++...+. +..+.++|....++++++|+|++.-+++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~lh 179 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLLP 179 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHHH
Confidence 467899999999999999887 578999999999999999999988884 6899999999888778999999999999
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
|+..+.....+ ++.+.|+++|+++..
T Consensus 180 ~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 180 LLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 99555555555 888899999877753
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=4.1e-13 Score=122.05 Aligned_cols=107 Identities=21% Similarity=0.201 Sum_probs=89.9
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEEc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIISC 143 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~~ 143 (288)
++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.++++ +++++++|+.++. ..++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~-~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLG-NVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCT-TEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCC-CceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 6789999999999999999987 679999999999999999999999985 5999999998754 15789999996
Q ss_pred cchhhhC-------HhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 144 EMMEAVG-------HEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 144 ~~l~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
......+ ......++..+.++|+|||.+++.+..
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5331111 155678999999999999999987654
No 235
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.40 E-value=1.2e-12 Score=117.30 Aligned_cols=119 Identities=15% Similarity=0.105 Sum_probs=94.9
Q ss_pred HHHHHHHHHc-CCCCCCEEEEECCcccHHHHHHHHc-cC-----CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc
Q 048309 56 RKHSLLIEKA-RVSKEHEVLEIGCGWGTFAIEVVRQ-TG-----CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY 128 (288)
Q Consensus 56 ~~~~~l~~~~-~~~~~~~vLDiGcG~G~~~~~la~~-~~-----~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 128 (288)
..+..++..+ ...++.+|||+|||+|.++..+++. +. .+++|+|+++.+++.|+.++...|+ ++.++++|.
T Consensus 116 ~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~ 193 (344)
T 2f8l_A 116 FIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDG 193 (344)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCT
T ss_pred HHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCC
Confidence 3345555554 4456789999999999999998876 32 6899999999999999999988887 589999998
Q ss_pred CCCCCCCCCCEEEEccchhhhCHhhH----------------HHHHHHHhcccccCcEEEEEee
Q 048309 129 RQLPKAKKYDRIISCEMMEAVGHEYM----------------EEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 129 ~~~~~~~~fD~I~~~~~l~~~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
......++||+|+++..+.+++..+. ..+++++.+.|+|||++++...
T Consensus 194 l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 194 LANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp TSCCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 87555678999999988766532221 2689999999999999988653
No 236
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.40 E-value=5.9e-14 Score=121.98 Aligned_cols=117 Identities=14% Similarity=0.126 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHH-HHcCCCCceEEE--EcccCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKV-NEAGLQDHIRLY--LCDYRQLP 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~-~~~g~~~~v~~~--~~d~~~~~ 132 (288)
.++..+.+...+.++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++.. .......++.++ ++|+.+++
T Consensus 69 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 69 AKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp HHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 34566666655678899999999999999999986 5899999998 533322110 000111168999 99999887
Q ss_pred CCCCCCEEEEccchhhhCH---hhH--HHHHHHHhcccccCc--EEEEEeec
Q 048309 133 KAKKYDRIISCEMMEAVGH---EYM--EEYFGCCESLLAKDG--LLVLQFSS 177 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~---~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 177 (288)
+++||+|+|..+ ++.+. +.. ..+++.+.++||||| .+++..+.
T Consensus 146 -~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 146 -PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 578999999876 33211 111 137899999999999 99987665
No 237
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.40 E-value=1.7e-13 Score=110.76 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=106.7
Q ss_pred HcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCCE
Q 048309 64 KARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYDR 139 (288)
Q Consensus 64 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD~ 139 (288)
.+++.+|.+|||+|||. +++|+|+.|++.|+++... +++++++|+.+++ ++++||+
T Consensus 7 ~~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred ccCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeE
Confidence 34678999999999986 2399999999999987532 4899999998876 3678999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCCCcccccccCchhhHhhhccCCCCCCCHHHHHHHHHHcCCh
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTPDARYNEYRLSSDFIKEYIFPGGCLPSLSRITSAMAAASSL 219 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~ 219 (288)
|++..+++|+. .+...++++++++|||||++++........ . ......+..++.+.+.++ ||
T Consensus 67 V~~~~~l~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~------~----------~~~~~~~~~~~~~~l~~a-Gf 128 (176)
T 2ld4_A 67 ILSGLVPGSTT-LHSAEILAEIARILRPGGCLFLKEPVETAV------D----------NNSKVKTASKLCSALTLS-GL 128 (176)
T ss_dssp EEECCSTTCCC-CCCHHHHHHHHHHEEEEEEEEEEEEEESSS------C----------SSSSSCCHHHHHHHHHHT-TC
T ss_pred EEECChhhhcc-cCHHHHHHHHHHHCCCCEEEEEEccccccc------c----------cccccCCHHHHHHHHHHC-CC
Confidence 99999999983 345899999999999999999954321110 0 011223566777776665 33
Q ss_pred HHHHhh---cCChHHHHHHHHHHHHHHhhcccCCccEEEEEEEcCCC
Q 048309 220 SKILAL---GFNEKFIWTWEYYFDYSAAGFKPRTLGNYQIVLSRPGN 263 (288)
Q Consensus 220 ~~~~~~---gf~~~~~~~w~~~~~~~~~~f~~g~~~~~~~~~~k~~~ 263 (288)
..+... .+.....+.|. ...++....+....++++||.-
T Consensus 129 i~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~a~Kp~~ 170 (176)
T 2ld4_A 129 VEVKELQREPLTPEEVQSVR-----EHLGHESDNLLFVQITGKKPNF 170 (176)
T ss_dssp EEEEEEEEECCCHHHHHHHH-----HHTCCCCSSEEEEEEEEECCCS
T ss_pred cEeecCcccCCCHHHHHHHH-----HHhcccCCceEEEEEeccCCcc
Confidence 111111 11222333332 2345544556688899999853
No 238
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=9.9e-13 Score=117.51 Aligned_cols=107 Identities=16% Similarity=0.241 Sum_probs=90.2
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
.+++.+ .++.+|||+|||+|.++.. ++ .+.+|+|+|+|+.+++.++++++.+++.++++++++|+.++. ++||+
T Consensus 188 ~i~~~~--~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~ 261 (336)
T 2yx1_A 188 RIMKKV--SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNR 261 (336)
T ss_dssp HHHHHC--CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEE
T ss_pred HHHHhc--CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcE
Confidence 344443 4788999999999999999 87 478999999999999999999999998678999999999876 88999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
|++..... ...++..+.++|+|||.+++.++..
T Consensus 262 Vi~dpP~~------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 262 VIMNLPKF------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EEECCTTT------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EEECCcHh------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 99964322 2377888899999999999877653
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.39 E-value=7.2e-14 Score=120.75 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=83.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHH-HHcCCCCceEEE--EcccCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKV-NEAGLQDHIRLY--LCDYRQLP 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~-~~~g~~~~v~~~--~~d~~~~~ 132 (288)
.++..+.+...+.++.+|||+|||+|.++..+++. .+|+|||+++ ++..+++.. .......++.++ ++|+.+++
T Consensus 61 ~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 61 AKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp HHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 44566666655678899999999999999999886 6899999998 532221110 000011168899 99999886
Q ss_pred CCCCCCEEEEccchhhhCH---hhH--HHHHHHHhcccccCc--EEEEEeec
Q 048309 133 KAKKYDRIISCEMMEAVGH---EYM--EEYFGCCESLLAKDG--LLVLQFSS 177 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~---~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 177 (288)
+++||+|+|..+ ++.+. +.. ..+++.+.++|+||| .|++..+.
T Consensus 138 -~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 138 -VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 579999999866 33211 111 137899999999999 99997765
No 240
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.39 E-value=2.5e-12 Score=113.05 Aligned_cols=110 Identities=18% Similarity=0.263 Sum_probs=84.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 135 (288)
.....+++.+.+.++.+|||||||+|.++..+++. +.+|+|+|+++.+++.++++++..++ ++++++++|+.+++. .
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-~ 105 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-P 105 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC-C
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc-c
Confidence 34567777888888999999999999999999986 67999999999999999999987777 589999999998774 4
Q ss_pred CCCEEEEccchhhhCHhhHHHHH---------------HHHhcccccCc
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYF---------------GCCESLLAKDG 169 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l---------------~~~~~~LkpgG 169 (288)
+||+|+++...+.. .+....++ +.+.++++++|
T Consensus 106 ~~D~Vv~n~py~~~-~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 106 KFDVCTANIPYKIS-SPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CCSEEEEECCGGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred cCCEEEEcCCcccc-cHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 89999998765543 22333444 34567788877
No 241
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.38 E-value=2.2e-12 Score=119.01 Aligned_cols=118 Identities=12% Similarity=0.132 Sum_probs=94.6
Q ss_pred HHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---CCC
Q 048309 60 LLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---KAK 135 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~~~ 135 (288)
.+...+...++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.++++++..|+ +++++++|+.+++ .++
T Consensus 237 ~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~~~~~ 314 (429)
T 1sqg_A 237 GCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQWCGEQ 314 (429)
T ss_dssp THHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHHHTTC
T ss_pred HHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhhcccC
Confidence 3445567788999999999999999999987 447999999999999999999999887 4899999998875 347
Q ss_pred CCCEEEEcc------chhhhCH-------hh-------HHHHHHHHhcccccCcEEEEEeecCC
Q 048309 136 KYDRIISCE------MMEAVGH-------EY-------MEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 136 ~fD~I~~~~------~l~~~~~-------~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
+||+|++.. ++.+.+. ++ ...+++++.++|||||++++++++..
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 899999743 2222211 11 25789999999999999999886643
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.36 E-value=8.5e-12 Score=115.19 Aligned_cols=115 Identities=16% Similarity=0.260 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL- 131 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~- 131 (288)
.....+..+++.+...++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.++++ +++++++|+.+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHh
Confidence 44556677788888778889999999999999999987 779999999999999999999999985 899999999883
Q ss_pred ---C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 ---P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ---~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+ ..++||+|+++...... .++++.+. .++|++.+++++
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~-----~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA-----AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC-----HHHHHHHH-HHCCSEEEEEES
T ss_pred hhhhhhcCCCCEEEECCCCccH-----HHHHHHHH-hcCCCeEEEEEC
Confidence 2 34689999997654433 23444443 378999888753
No 243
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.35 E-value=1e-11 Score=113.10 Aligned_cols=120 Identities=17% Similarity=0.202 Sum_probs=95.3
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cC--------------------------------------CEEEE
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG--------------------------------------CNYTG 97 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 97 (288)
....++...+..++..|||++||+|.+++.++.. .. .+|+|
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 268 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIG 268 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEE
Confidence 3455677778888899999999999999888765 21 45999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhh-h-CHhhHHHHHHHHhccccc--CcEEEE
Q 048309 98 ITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEA-V-GHEYMEEYFGCCESLLAK--DGLLVL 173 (288)
Q Consensus 98 iD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~-~-~~~~~~~~l~~~~~~Lkp--gG~l~~ 173 (288)
+|+++.+++.|+++++.+|+.++++++++|+.+++...+||+|+++..+.. + ..++...+++.+.+.|++ ||.+++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 348 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYV 348 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEE
Confidence 999999999999999999997789999999999886679999999966421 2 114456666666666665 888887
Q ss_pred Eee
Q 048309 174 QFS 176 (288)
Q Consensus 174 ~~~ 176 (288)
.+.
T Consensus 349 it~ 351 (393)
T 3k0b_A 349 LTS 351 (393)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 244
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.34 E-value=1.9e-11 Score=110.81 Aligned_cols=120 Identities=16% Similarity=0.216 Sum_probs=96.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cC--------------------------------------CEEEE
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG--------------------------------------CNYTG 97 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 97 (288)
....++......++..|+|.+||+|.+++.++.. .. .+|+|
T Consensus 182 LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~G 261 (384)
T 3ldg_A 182 MAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISG 261 (384)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEE
T ss_pred HHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEE
Confidence 3445677777788899999999999999988864 22 45999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhh-h-CHhhHHHHHHHHhccccc--CcEEEE
Q 048309 98 ITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEA-V-GHEYMEEYFGCCESLLAK--DGLLVL 173 (288)
Q Consensus 98 iD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~-~-~~~~~~~~l~~~~~~Lkp--gG~l~~ 173 (288)
+|+++.+++.|+++++.+|+.++++++++|+.+++...+||+|+++..+.. + ..++...+++.+.+.||+ ||.+++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 341 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFI 341 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999999999999999999998789999999999885569999999876532 2 235667777777777766 888888
Q ss_pred Eee
Q 048309 174 QFS 176 (288)
Q Consensus 174 ~~~ 176 (288)
.+.
T Consensus 342 it~ 344 (384)
T 3ldg_A 342 LTN 344 (384)
T ss_dssp EES
T ss_pred EEC
Confidence 543
No 245
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=3.2e-13 Score=114.50 Aligned_cols=108 Identities=10% Similarity=0.108 Sum_probs=76.3
Q ss_pred HHHHHHHHcCCC-CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEE-EcccCCCC--
Q 048309 57 KHSLLIEKARVS-KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLY-LCDYRQLP-- 132 (288)
Q Consensus 57 ~~~~l~~~~~~~-~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~-~~d~~~~~-- 132 (288)
++..+++.+... ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++.. ++... ..++....
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~ 97 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLA 97 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGG
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHh
Confidence 566777777654 467999999999999999998732599999999999998766432 22211 11222111
Q ss_pred -C-CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -K-AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~-~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
. ...+|.+.+..++.++ ..+++++.++|||||.+++..
T Consensus 98 ~~~~~~~d~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 98 DFEQGRPSFTSIDVSFISL-----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GCCSCCCSEEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE
T ss_pred HcCcCCCCEEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE
Confidence 1 1236777666666554 678999999999999999843
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.34 E-value=3e-12 Score=104.90 Aligned_cols=108 Identities=16% Similarity=0.145 Sum_probs=78.7
Q ss_pred HHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc-cC---------CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEE-E
Q 048309 58 HSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ-TG---------CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLY-L 125 (288)
Q Consensus 58 ~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~-~~---------~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~-~ 125 (288)
+..+.+... +.++.+|||+|||+|.++..+++. +. .+|+|+|+|+.. .+ .+++++ .
T Consensus 10 l~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~ 77 (196)
T 2nyu_A 10 LLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCP 77 (196)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECS
T ss_pred HHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEe
Confidence 334444443 567899999999999999999987 32 799999999831 22 368899 8
Q ss_pred cccCCCC---------CCCCCCEEEEccchhhhCH--hhH-------HHHHHHHhcccccCcEEEEEeec
Q 048309 126 CDYRQLP---------KAKKYDRIISCEMMEAVGH--EYM-------EEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 126 ~d~~~~~---------~~~~fD~I~~~~~l~~~~~--~~~-------~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
+|+.+.. .+++||+|++..+++.... .+. ..+++++.++|+|||.+++.++.
T Consensus 78 ~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 78 ADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp CCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 9887642 2358999999654432100 111 57899999999999999997654
No 247
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.34 E-value=1.7e-11 Score=112.64 Aligned_cols=106 Identities=14% Similarity=0.203 Sum_probs=85.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCC
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKY 137 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~f 137 (288)
...+++ ..++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++++.+++. ++++++|+.++... +|
T Consensus 282 ~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~f 354 (425)
T 2jjq_A 282 VRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GF 354 (425)
T ss_dssp HHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TC
T ss_pred HHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CC
Confidence 344444 457789999999999999999986 679999999999999999999998884 99999999987643 89
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|+|++........ ..+++.+. .|+|+|.+++++
T Consensus 355 D~Vv~dPPr~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 355 DTVIVDPPRAGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp SEEEECCCTTCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CEEEEcCCccchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 9999976543331 23444443 489999999864
No 248
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.34 E-value=7.7e-12 Score=113.66 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=96.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cC--------------------------------------CEEEE
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TG--------------------------------------CNYTG 97 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~--------------------------------------~~v~g 97 (288)
....++......++.+|||++||+|.+++.++.. .. .+|+|
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~G 262 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYG 262 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEE
Confidence 4455677777788899999999999999998775 21 47999
Q ss_pred EcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh-hhC-HhhHHHHHHHHhccccc--CcEEEE
Q 048309 98 ITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME-AVG-HEYMEEYFGCCESLLAK--DGLLVL 173 (288)
Q Consensus 98 iD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~-~~~-~~~~~~~l~~~~~~Lkp--gG~l~~ 173 (288)
+|+++.+++.|+++++.+|+.+++++.++|+.+++.+.+||+|+++..+. .++ .++...+++++.+.|++ ||.+++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~i 342 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYL 342 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEE
Confidence 99999999999999999998778999999999988667999999987753 221 24566777777777776 888777
Q ss_pred Eee
Q 048309 174 QFS 176 (288)
Q Consensus 174 ~~~ 176 (288)
.+.
T Consensus 343 it~ 345 (385)
T 3ldu_A 343 ITS 345 (385)
T ss_dssp EES
T ss_pred EEC
Confidence 543
No 249
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.33 E-value=1.3e-12 Score=112.76 Aligned_cols=98 Identities=12% Similarity=-0.028 Sum_probs=80.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc--CC-CCceEEEEcccCCCCCCCCCCEEEEcc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA--GL-QDHIRLYLCDYRQLPKAKKYDRIISCE 144 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~~~~~~fD~I~~~~ 144 (288)
..+.+|||||||+|..+..++++ +.+|+++|+++.+++.|++++... ++ .++++++.+|..++. ++||+|++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~ 147 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQ 147 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESS
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECC
Confidence 45679999999999999999887 489999999999999998765321 11 247999999998876 7899999873
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
. ++..+++.+.+.|+|||++++..
T Consensus 148 ~-------dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 E-------PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp C-------CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-------ChHHHHHHHHHhcCCCcEEEEEc
Confidence 2 22348999999999999999854
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.32 E-value=2.4e-11 Score=106.28 Aligned_cols=89 Identities=18% Similarity=0.243 Sum_probs=77.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
..+..+++.+.+.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++++|+.+++ +.
T Consensus 37 ~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 37 NFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNK 112 (295)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCccc
Confidence 45677888888889999999999999999999997 779999999999999999998743 48999999999987 55
Q ss_pred CCCCEEEEccchhh
Q 048309 135 KKYDRIISCEMMEA 148 (288)
Q Consensus 135 ~~fD~I~~~~~l~~ 148 (288)
.+||+|+++..++.
T Consensus 113 ~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 113 LDFNKVVANLPYQI 126 (295)
T ss_dssp SCCSEEEEECCGGG
T ss_pred CCccEEEEeCcccc
Confidence 68999998866543
No 251
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.30 E-value=1.2e-12 Score=115.24 Aligned_cols=116 Identities=16% Similarity=0.210 Sum_probs=80.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcC----CHHHHHHHHHHHHHcCCCCceEEEEc-ccCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITL----SAEQMKYAEMKVNEAGLQDHIRLYLC-DYRQL 131 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~----s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~ 131 (288)
++..+.+...++++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++... .+..+. ++++++++ |+..+
T Consensus 70 KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l 144 (305)
T 2p41_A 70 KLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFI 144 (305)
T ss_dssp HHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTS
T ss_pred HHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccC
Confidence 3445566544567889999999999999999986 48999999 554432111 111121 46899999 88877
Q ss_pred CCCCCCCEEEEccchh---hhC-HhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 132 PKAKKYDRIISCEMME---AVG-HEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~---~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
+ .++||+|+|..++. +.. ......++..+.++|||||.|++..+..
T Consensus 145 ~-~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 145 P-PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp C-CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred C-cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 5 46899999976642 221 0111257889999999999999865543
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.29 E-value=1.2e-11 Score=105.57 Aligned_cols=86 Identities=22% Similarity=0.358 Sum_probs=70.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C-
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K- 133 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~- 133 (288)
.....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++... ++++++++|+.+++ +
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQR-CNFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCS
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHc-CCeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCccc
Confidence 45567788888888899999999999999999987 679999999999999999887542 47999999999987 3
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
...| .|+++...
T Consensus 93 ~~~~-~vv~nlPy 104 (244)
T 1qam_A 93 NQSY-KIFGNIPY 104 (244)
T ss_dssp SCCC-EEEEECCG
T ss_pred CCCe-EEEEeCCc
Confidence 2345 56665443
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.27 E-value=7.7e-12 Score=115.88 Aligned_cols=119 Identities=12% Similarity=0.119 Sum_probs=95.4
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCC-ce
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--------------TGCNYTGITLSAEQMKYAEMKVNEAGLQD-HI 121 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--------------~~~~v~giD~s~~~~~~a~~~~~~~g~~~-~v 121 (288)
....+++.+.+.++.+|+|+|||+|.++..+++. ...+++|+|+++.+++.|+.++...|+.. ++
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~ 238 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRS 238 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCC
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCC
Confidence 3445666667778889999999999999888764 23679999999999999999998888742 67
Q ss_pred EEEEcccCCCCCCCCCCEEEEccchhhhCHh---------------hHHHHHHHHhcccccCcEEEEEe
Q 048309 122 RLYLCDYRQLPKAKKYDRIISCEMMEAVGHE---------------YMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 122 ~~~~~d~~~~~~~~~fD~I~~~~~l~~~~~~---------------~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++.++|....+...+||+|+++..+.+.... ....+++.+.+.|+|||++++..
T Consensus 239 ~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 239 PIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp SEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 8999999887744699999999877654211 12478999999999999998854
No 254
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.25 E-value=7.3e-11 Score=104.02 Aligned_cols=117 Identities=10% Similarity=-0.002 Sum_probs=89.8
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCC----
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKA---- 134 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~---- 134 (288)
+...+.+.++.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++++..|+ .+++++++|+.++...
T Consensus 94 ~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~-~~v~~~~~D~~~~~~~~~~~ 172 (309)
T 2b9e_A 94 PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV-SCCELAEEDFLAVSPSDPRY 172 (309)
T ss_dssp HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC-CSEEEEECCGGGSCTTCGGG
T ss_pred HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC-CeEEEEeCChHhcCcccccc
Confidence 344567788999999999999999999985 346999999999999999999999998 4899999999887621
Q ss_pred CCCCEEEEccc------hhhh---------CHhh-------HHHHHHHHhcccccCcEEEEEeecCC
Q 048309 135 KKYDRIISCEM------MEAV---------GHEY-------MEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 135 ~~fD~I~~~~~------l~~~---------~~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
.+||.|++... +..- ++++ ..++++.+.++|+ ||+++.++.+..
T Consensus 173 ~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 173 HEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp TTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred CCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 57999998432 2110 0111 1346888888887 999998877643
No 255
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.24 E-value=1.4e-11 Score=107.37 Aligned_cols=126 Identities=16% Similarity=0.116 Sum_probs=85.0
Q ss_pred HHHhhhhhcCCCCCCCHHHHHHHHHHHHH--HHcCCCCCCEEEEECC------cccHHHHHHHHc-c-CCEEEEEcCCHH
Q 048309 34 AHRNISYHYDLDEDEDLKVAQMRKHSLLI--EKARVSKEHEVLEIGC------GWGTFAIEVVRQ-T-GCNYTGITLSAE 103 (288)
Q Consensus 34 ~~~~~a~~Yd~~~~~~l~~a~~~~~~~l~--~~~~~~~~~~vLDiGc------G~G~~~~~la~~-~-~~~v~giD~s~~ 103 (288)
.|.+.+..||.. ....+....+...+ ..+.++++.+|||+|| |+|. ..+++. + +.+|+|+|+|+.
T Consensus 29 ~Y~~~~~~p~g~---~~n~~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~ 103 (290)
T 2xyq_A 29 NYGENAVIPKGI---MMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF 103 (290)
T ss_dssp SCCCCTTSCTTC---CHHHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC
T ss_pred hhhcCCcCCCcc---cccHHHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC
Confidence 455566666653 23222222222223 2346778999999999 5577 444444 3 579999999997
Q ss_pred HHHHHHHHHHHcCCCCceEE-EEcccCCCCCCCCCCEEEEccchhh--------h-CHhhHHHHHHHHhcccccCcEEEE
Q 048309 104 QMKYAEMKVNEAGLQDHIRL-YLCDYRQLPKAKKYDRIISCEMMEA--------V-GHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 104 ~~~~a~~~~~~~g~~~~v~~-~~~d~~~~~~~~~fD~I~~~~~l~~--------~-~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
+ .++++ +++|+.+++..++||+|+++...+. . .......+++++.++|||||.|++
T Consensus 104 -------------v-~~v~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 104 -------------V-SDADSTLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp -------------B-CSSSEEEESCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------C-CCCEEEEECccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 1 26788 9999998775578999999743221 1 013356899999999999999999
Q ss_pred EeecC
Q 048309 174 QFSST 178 (288)
Q Consensus 174 ~~~~~ 178 (288)
..+..
T Consensus 170 ~~~~~ 174 (290)
T 2xyq_A 170 KITEH 174 (290)
T ss_dssp EECSS
T ss_pred EEecc
Confidence 76543
No 256
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.24 E-value=1.5e-11 Score=111.17 Aligned_cols=112 Identities=11% Similarity=0.182 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 54 QMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.......+++.+... +.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+++++.+++ .+++++.+|+.++.
T Consensus 199 ~~~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 199 NIQMLEWALDVTKGS-KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHH
Confidence 345566777777654 578999999999999999875 66999999999999999999999998 58999999997752
Q ss_pred --CC--------------CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 133 --KA--------------KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 --~~--------------~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.. .+||+|++...-.. +..++.+.|+++|.++..+.
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g--------~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRSG--------LDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC--------CCHHHHHHHTTSSEEEEEES
T ss_pred HHhhccccccccccccccCCCCEEEECcCccc--------cHHHHHHHHhCCCEEEEEEC
Confidence 11 37999998754322 22344566678888877554
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.23 E-value=1.6e-11 Score=112.66 Aligned_cols=111 Identities=17% Similarity=0.290 Sum_probs=85.9
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKA 134 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~ 134 (288)
....+++.+...++.+|||+|||+|.++..++++ ...+++|+|+++.+++.| .+++++++|+.+....
T Consensus 27 l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~ 96 (421)
T 2ih2_A 27 VVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG 96 (421)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS
T ss_pred HHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc
Confidence 3445666666556779999999999999999886 457999999999998766 3689999999988766
Q ss_pred CCCCEEEEccchhh----------hCHhh-----------------HHHHHHHHhcccccCcEEEEEeec
Q 048309 135 KKYDRIISCEMMEA----------VGHEY-----------------MEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 135 ~~fD~I~~~~~l~~----------~~~~~-----------------~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
++||+|+++..+.. +..+. ...+++.+.++|+|||.+++....
T Consensus 97 ~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 97 EAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 79999999744321 11111 236799999999999999886543
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.17 E-value=2e-10 Score=98.42 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=72.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C-
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K- 133 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~- 133 (288)
.....+++.+++.++.+|||||||+|.++..+++. +.+|+++|+++.+++.+++++... ++++++++|+.+++ +
T Consensus 16 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~~---~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 16 FVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQQ---KNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTTC---TTEEEEESCTTTCCGGG
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhhC---CCcEEEEcchHhCCHHH
Confidence 45567888888889999999999999999999986 679999999999999999988652 58999999999986 2
Q ss_pred ---CCCCCEEEEccchh
Q 048309 134 ---AKKYDRIISCEMME 147 (288)
Q Consensus 134 ---~~~fD~I~~~~~l~ 147 (288)
.++|| |+++...+
T Consensus 92 ~~~~~~~~-vv~NlPY~ 107 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPYN 107 (255)
T ss_dssp SCCSSCEE-EEEECCHH
T ss_pred hccCCCeE-EEecCCcc
Confidence 35677 66665543
No 259
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.16 E-value=7.3e-13 Score=113.12 Aligned_cols=112 Identities=19% Similarity=0.275 Sum_probs=85.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C-C
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K-A 134 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~-~ 134 (288)
....+++.+...++.+|||||||+|.++..+++. +.+|+|+|+|+.+++.+++++.. ..+++++++|+.+++ + +
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~~---~~~v~~~~~D~~~~~~~~~ 92 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLKL---NTRVTLIHQDILQFQFPNK 92 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTTT---CSEEEECCSCCTTTTCCCS
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhcc---CCceEEEECChhhcCcccC
Confidence 4567788888888999999999999999999987 68999999999999988877642 257999999999987 3 3
Q ss_pred CCCCEEEEccchhhhCHh----------hHHHHH----HHHhcccccCcEEEEE
Q 048309 135 KKYDRIISCEMMEAVGHE----------YMEEYF----GCCESLLAKDGLLVLQ 174 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~----------~~~~~l----~~~~~~LkpgG~l~~~ 174 (288)
++| .|+++..... +.. .....+ +.+.++|+|||.+.+.
T Consensus 93 ~~f-~vv~n~Py~~-~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 93 QRY-KIVGNIPYHL-STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp SEE-EEEEECCSSS-CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred CCc-EEEEeCCccc-cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 678 6777643221 111 112233 6688999999997763
No 260
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=7.9e-11 Score=106.63 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=84.1
Q ss_pred CCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc---------------CCCCceEEEEcccCCCC
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA---------------GLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~---------------g~~~~v~~~~~d~~~~~ 132 (288)
++.+|||+|||+|..+..+++. ++.+|+++|+++.+++.++++++.+ ++. +++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHH
Confidence 5789999999999999999987 5678999999999999999999998 774 5999999998764
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..++||+|+.... . ....++..+.+.|++||.++++.
T Consensus 126 ~~~~~~fD~I~lDP~-~-----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 AERHRYFHFIDLDPF-G-----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHSTTCEEEEEECCS-S-----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhccCCCCEEEeCCC-C-----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 3468999997542 1 22577888889999999888754
No 261
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=4.1e-11 Score=108.72 Aligned_cols=102 Identities=9% Similarity=0.047 Sum_probs=84.9
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cC-CEEEEEcCCHHHHHHHHHHHHHcCCCCc-eEEEEcccCCCC---CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TG-CNYTGITLSAEQMKYAEMKVNEAGLQDH-IRLYLCDYRQLP---KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~-v~~~~~d~~~~~---~~~~fD~I~ 141 (288)
.++.+|||++||+|.+++.++++ .+ .+|+++|+++.+++.++++++.+++.++ ++++.+|+.++. ..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999986 34 5899999999999999999999999655 999999986642 246799999
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.. . .....++..+.+.|++||.++++.
T Consensus 131 lDP-~-----g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP-F-----GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC-S-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC-C-----cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 876 1 122468888889999999888865
No 262
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.14 E-value=5e-11 Score=106.31 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=82.0
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC---CC----CceEEEEcccCCCC-----CCC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAG---LQ----DHIRLYLCDYRQLP-----KAK 135 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g---~~----~~v~~~~~d~~~~~-----~~~ 135 (288)
..+.+||+||||+|..+..+++++..+|++||+++.+++.|++++...+ +. ++++++.+|+..+. ..+
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 3578999999999999999998855799999999999999999875321 22 26999999998854 257
Q ss_pred CCCEEEEccch-hh-hCHh--hHHHHHHHH----hcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMM-EA-VGHE--YMEEYFGCC----ESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l-~~-~~~~--~~~~~l~~~----~~~LkpgG~l~~~~~~ 177 (288)
+||+|++...- .. ..+. ...++++.+ .++|+|||++++....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999997643 10 0010 124455555 9999999999987543
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.14 E-value=1.6e-10 Score=99.92 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KA 134 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~ 134 (288)
.....+++.+++.++ +|||||||+|.++..+++. +.+|+++|+++.+++.+++++.. .+++++++|+.+++ +.
T Consensus 34 ~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~ 107 (271)
T 3fut_A 34 AHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEE 107 (271)
T ss_dssp HHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGG
T ss_pred HHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhh
Confidence 456778888888889 9999999999999999997 67999999999999999988752 47999999999887 32
Q ss_pred -CCCCEEEEccchhhhCHhhHHHHHHH
Q 048309 135 -KKYDRIISCEMMEAVGHEYMEEYFGC 160 (288)
Q Consensus 135 -~~fD~I~~~~~l~~~~~~~~~~~l~~ 160 (288)
..+|.|+++...+ ++.+-...++..
T Consensus 108 ~~~~~~iv~NlPy~-iss~il~~ll~~ 133 (271)
T 3fut_A 108 VPQGSLLVANLPYH-IATPLVTRLLKT 133 (271)
T ss_dssp SCTTEEEEEEECSS-CCHHHHHHHHHH
T ss_pred ccCccEEEecCccc-ccHHHHHHHhcC
Confidence 3689998876544 333344444443
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.12 E-value=3.6e-11 Score=103.38 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=70.4
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCH-------HHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSA-------EQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~-------~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
+.+.+...++.+|||+|||+|..+..+++. +++|+|+|+++ .+++.|+++++.+++..+++++++|+.++.
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~ 153 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMP 153 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHH
Confidence 334445556789999999999999999986 78999999999 999999988877776556999999998852
Q ss_pred --CC--CCCCEEEEccchhh
Q 048309 133 --KA--KKYDRIISCEMMEA 148 (288)
Q Consensus 133 --~~--~~fD~I~~~~~l~~ 148 (288)
++ ++||+|++...+.+
T Consensus 154 ~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 154 ALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHCCCSEEEECCCC--
T ss_pred hhhccCCCccEEEECCCCCC
Confidence 22 68999999876655
No 265
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.10 E-value=1.2e-10 Score=102.12 Aligned_cols=87 Identities=26% Similarity=0.415 Sum_probs=74.0
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---C
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---K 133 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---~ 133 (288)
+..+++.+.+.++.+|||+|||+|..+..+++. ++.+|+|+|.|+.+++.|+++++..+ .+++++++|+.+++ .
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~ 92 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLK 92 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHH
Confidence 456677778888999999999999999999987 46899999999999999999988776 48999999998864 1
Q ss_pred ---CCCCCEEEEccch
Q 048309 134 ---AKKYDRIISCEMM 146 (288)
Q Consensus 134 ---~~~fD~I~~~~~l 146 (288)
..+||.|++...+
T Consensus 93 ~~g~~~~D~Vl~D~gv 108 (301)
T 1m6y_A 93 TLGIEKVDGILMDLGV 108 (301)
T ss_dssp HTTCSCEEEEEEECSC
T ss_pred hcCCCCCCEEEEcCcc
Confidence 1589999986543
No 266
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.09 E-value=8.2e-10 Score=105.37 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=78.0
Q ss_pred CCEEEEECCcccHHHHH---HHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEcc
Q 048309 70 EHEVLEIGCGWGTFAIE---VVRQTGC--NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCE 144 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~---la~~~~~--~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~ 144 (288)
+..|+|+|||+|-++.. .++..+. +|++||.|+ +...+++....+++.++|+++.+|++++..++++|+||+-.
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEw 436 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSEL 436 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEc
Confidence 45799999999998444 3333333 689999997 66788888999999999999999999999778999999843
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
.=..+-.+...+.+....++|||||.++
T Consensus 437 MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 437 LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 2111111334567778889999999864
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.08 E-value=1.2e-09 Score=90.03 Aligned_cols=112 Identities=11% Similarity=0.091 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC--CCceEEEEcc
Q 048309 50 LKVAQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL--QDHIRLYLCD 127 (288)
Q Consensus 50 l~~a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d 127 (288)
+...+.+.+...+. +..+|||+||| ..+..+|+..+.+|+.||.+++..+.++++++.+|+ .++++++.+|
T Consensus 16 v~~~~~~~L~~~l~-----~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gd 88 (202)
T 3cvo_A 16 MPPAEAEALRMAYE-----EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTD 88 (202)
T ss_dssp SCHHHHHHHHHHHH-----HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECC
T ss_pred CCHHHHHHHHHHhh-----CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeC
Confidence 33444555544332 46799999985 677777764467999999999999999999999998 7899999999
Q ss_pred cCCC---------------C----------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 128 YRQL---------------P----------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 128 ~~~~---------------~----------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.+. + ..++||+|+..+-.. ...+..+.+.|+|||++++..
T Consensus 89 a~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 89 IGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp CSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCSSCEEEEETT
T ss_pred chhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcCCCeEEEEeC
Confidence 6542 1 236899999986421 355566779999999998754
No 268
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.02 E-value=1.4e-09 Score=92.85 Aligned_cols=72 Identities=15% Similarity=0.222 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
.....+++.+...++.+|||||||+|.++..+++.+..+|+|+|+++.+++.++++ . ..+++++++|+.+++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~--~---~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI--G---DERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS--C---CTTEEEECSCTTTCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc--c---CCCeEEEEcchhhCC
Confidence 45677888888888999999999999999999986347999999999999999877 1 247999999999987
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.01 E-value=2.5e-09 Score=104.16 Aligned_cols=120 Identities=17% Similarity=0.158 Sum_probs=91.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-------------------------------------------cCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-------------------------------------------TGC 93 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-------------------------------------------~~~ 93 (288)
....++......++..|||.+||+|.+++.++.. +..
T Consensus 178 LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~ 257 (703)
T 3v97_A 178 LAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSS 257 (703)
T ss_dssp HHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCc
Confidence 3455677777778889999999999999887753 125
Q ss_pred EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C--CCCCCEEEEccchhh-h-CHhhHHHHHHHHhc---cc
Q 048309 94 NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K--AKKYDRIISCEMMEA-V-GHEYMEEYFGCCES---LL 165 (288)
Q Consensus 94 ~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~--~~~fD~I~~~~~l~~-~-~~~~~~~~l~~~~~---~L 165 (288)
+++|+|+++.+++.|+.+++.+|+.+.+++.++|+.++. + .++||+|+++..+.. + ..++...+.+.+.+ .+
T Consensus 258 ~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~ 337 (703)
T 3v97_A 258 HFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQ 337 (703)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhh
Confidence 799999999999999999999999777999999999875 2 238999999966532 1 22344555554444 44
Q ss_pred ccCcEEEEEee
Q 048309 166 AKDGLLVLQFS 176 (288)
Q Consensus 166 kpgG~l~~~~~ 176 (288)
.|||.+++.+.
T Consensus 338 ~~g~~~~ilt~ 348 (703)
T 3v97_A 338 FGGWNLSLFSA 348 (703)
T ss_dssp CTTCEEEEEES
T ss_pred CCCCeEEEEeC
Confidence 57999988643
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.01 E-value=2e-09 Score=93.40 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=68.4
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCE----EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCN----YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL 131 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~----v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 131 (288)
.....+++.+.+.++.+|||||||+|.++..+++. +.. |+|+|+++.+++.++++. ..+++++++|+.++
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~-~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIAR-LATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTF 102 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHH-HCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHh-CCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcC
Confidence 35567888888889999999999999999999987 334 999999999999999884 15799999999998
Q ss_pred CCCC-------CCCEEEEccchh
Q 048309 132 PKAK-------KYDRIISCEMME 147 (288)
Q Consensus 132 ~~~~-------~fD~I~~~~~l~ 147 (288)
+.+. ..+.|+++....
T Consensus 103 ~~~~~~~~~~~~~~~vv~NlPY~ 125 (279)
T 3uzu_A 103 DFGSIARPGDEPSLRIIGNLPYN 125 (279)
T ss_dssp CGGGGSCSSSSCCEEEEEECCHH
T ss_pred ChhHhcccccCCceEEEEccCcc
Confidence 7222 234566665443
No 271
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.97 E-value=2.5e-10 Score=97.92 Aligned_cols=107 Identities=10% Similarity=0.102 Sum_probs=76.0
Q ss_pred HHHHHHcCCCCC--CEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-------C-CCCceEEEEccc
Q 048309 59 SLLIEKARVSKE--HEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA-------G-LQDHIRLYLCDY 128 (288)
Q Consensus 59 ~~l~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~-------g-~~~~v~~~~~d~ 128 (288)
+.+++.+.+.++ .+|||+|||+|..+..+++. +++|+++|.++.+.+.+++.++.. + +..+++++++|.
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 456677777777 89999999999999999987 779999999999877777665432 1 224799999999
Q ss_pred CCC-C-CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCc
Q 048309 129 RQL-P-KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDG 169 (288)
Q Consensus 129 ~~~-~-~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 169 (288)
.++ + ..++||+|++...+.+-. ..+.+++..+.|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~~~---~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPHKQ---KSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCCCC---C-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCCcc---cchHHHHHHHHHHHhh
Confidence 874 3 335799999998776532 1234444445554433
No 272
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.96 E-value=1.4e-09 Score=102.84 Aligned_cols=117 Identities=13% Similarity=0.072 Sum_probs=91.8
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c------------------CCEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T------------------GCNYTGITLSAEQMKYAEMKVNEAGLQD 119 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~------------------~~~v~giD~s~~~~~~a~~~~~~~g~~~ 119 (288)
..+++.+.+.++.+|+|.+||+|.++..+++. . ..+++|+|+++.+++.|+.++...|+..
T Consensus 159 ~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~ 238 (541)
T 2ar0_A 159 KTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEG 238 (541)
T ss_dssp HHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCc
Confidence 44566667778889999999999998887764 1 2479999999999999999988888743
Q ss_pred ----ceEEEEcccCCCC--CCCCCCEEEEccchhhhCH------------hhHHHHHHHHhcccccCcEEEEEe
Q 048309 120 ----HIRLYLCDYRQLP--KAKKYDRIISCEMMEAVGH------------EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 120 ----~v~~~~~d~~~~~--~~~~fD~I~~~~~l~~~~~------------~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
++.+.++|....+ ...+||+|+++..+..... .....++..+.+.|+|||++.+..
T Consensus 239 ~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 239 NLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp BGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 2789999987654 4578999999877654311 123478999999999999998854
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.95 E-value=5.6e-09 Score=90.70 Aligned_cols=124 Identities=20% Similarity=0.244 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHc--C-C-CCceEEEEcc
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEA--G-L-QDHIRLYLCD 127 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~--g-~-~~~v~~~~~d 127 (288)
.+.+.+.+..-... +.+++||-||.|.|..+..++++ +..+|+.||+++.+++.|++.+... + + .++++++.+|
T Consensus 68 ~YhE~l~h~~l~~~-p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~D 146 (294)
T 3o4f_A 68 IYHEMMTHVPLLAH-GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDD 146 (294)
T ss_dssp HHHHHHHHHHHHHS-SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC
T ss_pred HHHHHHHHHHHhhC-CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEech
Confidence 33444444333333 35679999999999999999988 5579999999999999999987531 1 1 3689999999
Q ss_pred cCCCC--CCCCCCEEEEccchhhhCHh--hHHHHHHHHhcccccCcEEEEEeec
Q 048309 128 YRQLP--KAKKYDRIISCEMMEAVGHE--YMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 128 ~~~~~--~~~~fD~I~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
...+- ..++||+|+....-..-+.. --.++++.+.+.|+|||+++....+
T Consensus 147 g~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 147 GVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp TTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCC
Confidence 99876 66899999986532111101 1267899999999999999986543
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.91 E-value=1.6e-09 Score=98.57 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=66.3
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc--CCCCceEEEEcccCCCC---CCCCCCEEEEc
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA--GLQDHIRLYLCDYRQLP---KAKKYDRIISC 143 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~~---~~~~fD~I~~~ 143 (288)
+|.+|||+|||+|..+..+++. +.+|+++|+|+.+++.|+++++.. |+ .+++++++|+.++. ..++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 5889999999999999999886 779999999999999999999988 87 68999999999853 23689999997
Q ss_pred cc
Q 048309 144 EM 145 (288)
Q Consensus 144 ~~ 145 (288)
..
T Consensus 171 PP 172 (410)
T 3ll7_A 171 PA 172 (410)
T ss_dssp CE
T ss_pred CC
Confidence 43
No 275
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.90 E-value=2.3e-09 Score=101.43 Aligned_cols=117 Identities=15% Similarity=0.079 Sum_probs=88.4
Q ss_pred HHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-c---------------CCEEEEEcCCHHHHHHHHHHHHHcCCCCce
Q 048309 58 HSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-T---------------GCNYTGITLSAEQMKYAEMKVNEAGLQDHI 121 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~---------------~~~v~giD~s~~~~~~a~~~~~~~g~~~~v 121 (288)
...+++.+.+.++ +|+|.+||+|.+...+++. . ...++|+|+++.+++.|+.++...|+..++
T Consensus 234 v~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i 312 (544)
T 3khk_A 234 VTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNF 312 (544)
T ss_dssp HHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBC
T ss_pred HHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCccc
Confidence 3445555665555 9999999999998876543 1 458999999999999999999888886565
Q ss_pred EEEEcccCCCC--CCCCCCEEEEccchhh-------------------------hCHh--hHHHHHHHHhcccccCcEEE
Q 048309 122 RLYLCDYRQLP--KAKKYDRIISCEMMEA-------------------------VGHE--YMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 122 ~~~~~d~~~~~--~~~~fD~I~~~~~l~~-------------------------~~~~--~~~~~l~~~~~~LkpgG~l~ 172 (288)
.+.++|....+ ...+||+|+++..+.. +++. .--.+++.+.+.|+|||++.
T Consensus 313 ~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 313 GKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp CSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEE
T ss_pred ceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEE
Confidence 55888887655 4578999999876542 1000 11268999999999999988
Q ss_pred EEe
Q 048309 173 LQF 175 (288)
Q Consensus 173 ~~~ 175 (288)
+..
T Consensus 393 iVl 395 (544)
T 3khk_A 393 LLL 395 (544)
T ss_dssp EEE
T ss_pred EEe
Confidence 754
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.87 E-value=1.2e-09 Score=93.39 Aligned_cols=85 Identities=14% Similarity=0.074 Sum_probs=67.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCE--EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCN--YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~--v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.....+++.+...++.+|||||||+|.++. +++ +.+ |+++|+++.+++.+++++... ++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNF 81 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCH
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCH
Confidence 355677888888889999999999999999 654 356 999999999999999876542 47999999999976
Q ss_pred CC-----CCCCEEEEccch
Q 048309 133 KA-----KKYDRIISCEMM 146 (288)
Q Consensus 133 ~~-----~~fD~I~~~~~l 146 (288)
++ +..|.|+++...
T Consensus 82 ~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 82 GELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHHHTSCEEEEEECCT
T ss_pred HHhhcccCCceEEEECCCC
Confidence 21 234677776553
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.85 E-value=7.7e-09 Score=98.77 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCEEEEECCcccHHHHHH---HHcc-----------CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC--
Q 048309 70 EHEVLEIGCGWGTFAIEV---VRQT-----------GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK-- 133 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~l---a~~~-----------~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-- 133 (288)
+..|||+|||+|-++... ++.. ..+|++||.++.++...+.+.. +++.++|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 458999999999996432 2211 2389999999987766665554 7887889999999999873
Q ss_pred ----CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 134 ----AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 134 ----~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
.+++|+||+-..=.....+...+.+..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 789999999543221112445667888889999999765
No 278
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.83 E-value=1.1e-08 Score=87.21 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=78.8
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.-++..+.++..++++.+|||+|||+|.++..++.+ +...++|+|++-.+....... ...+ .++..+..++....
T Consensus 60 A~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g--~~ii~~~~~~dv~~l 136 (277)
T 3evf_A 60 TAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG--WNIITFKDKTDIHRL 136 (277)
T ss_dssp HHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT--GGGEEEECSCCTTTS
T ss_pred HHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC--CCeEEEeccceehhc
Confidence 346677777777788899999999999999998876 334688888874321000000 0001 14555666654444
Q ss_pred CCCCCCEEEEccchh----hhCHhhHHHHHHHHhcccccC-cEEEEEeec
Q 048309 133 KAKKYDRIISCEMME----AVGHEYMEEYFGCCESLLAKD-GLLVLQFSS 177 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~----~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 177 (288)
.+++||+|+|..+.+ .........+++.+.++|+|| |.|++..+.
T Consensus 137 ~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 137 EPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 567899999987555 221111123578889999999 999996665
No 279
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.77 E-value=3.1e-08 Score=93.49 Aligned_cols=109 Identities=15% Similarity=0.190 Sum_probs=86.1
Q ss_pred CCCCCEEEEECCcccHHHHHHHHc----cCCEEEEEcCCHHHHHHHHHHHHHcCCC-CceEEEEcccCCC--C--CCCCC
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQ----TGCNYTGITLSAEQMKYAEMKVNEAGLQ-DHIRLYLCDYRQL--P--KAKKY 137 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~----~~~~v~giD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~--~--~~~~f 137 (288)
..++.+|+|.+||+|.+...+++. ...+++|+|+++.+++.|+.++...|+. .++.+.++|.... + ...+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 356789999999999998888775 2568999999999999999999888874 4689999998876 3 45789
Q ss_pred CEEEEccchhhh-------------------CH-h-hHHHHHHHHhcccc-cCcEEEEEe
Q 048309 138 DRIISCEMMEAV-------------------GH-E-YMEEYFGCCESLLA-KDGLLVLQF 175 (288)
Q Consensus 138 D~I~~~~~l~~~-------------------~~-~-~~~~~l~~~~~~Lk-pgG~l~~~~ 175 (288)
|+|+++..+..- ++ . .--.++..+.+.|+ |||++.+..
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 999998655311 00 0 01248999999999 999988744
No 280
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.77 E-value=1.7e-07 Score=84.24 Aligned_cols=127 Identities=9% Similarity=0.115 Sum_probs=79.1
Q ss_pred HHHHHHHHHHcCCCC-----CCEEEEECCcccHHHHHHHHc----------------cCCEEEEEcCCHHHHHHHHHHHH
Q 048309 55 MRKHSLLIEKARVSK-----EHEVLEIGCGWGTFAIEVVRQ----------------TGCNYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~-----~~~vLDiGcG~G~~~~~la~~----------------~~~~v~giD~s~~~~~~a~~~~~ 113 (288)
...+...++.+.... +.+|+|+|||+|.++..++.. +..+|...|+-.......-+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 344555566665543 478999999999999887331 23456666755444322222111
Q ss_pred Hc-----------CCCCceEEEEc---ccCCCC-CCCCCCEEEEccchhhhCH---------------------------
Q 048309 114 EA-----------GLQDHIRLYLC---DYRQLP-KAKKYDRIISCEMMEAVGH--------------------------- 151 (288)
Q Consensus 114 ~~-----------g~~~~v~~~~~---d~~~~~-~~~~fD~I~~~~~l~~~~~--------------------------- 151 (288)
.. +...+--++.+ .+..-. +++++|+|+++.++|+++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v 192 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKT 192 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHH
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHH
Confidence 10 00001112222 222222 6789999999999999841
Q ss_pred ---------hhHHHHHHHHhcccccCcEEEEEeecCCCc
Q 048309 152 ---------EYMEEYFGCCESLLAKDGLLVLQFSSTPDA 181 (288)
Q Consensus 152 ---------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (288)
.+...+++..++.|+|||++++...+.++.
T Consensus 193 ~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~ 231 (374)
T 3b5i_A 193 TTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSV 231 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCC
Confidence 155668999999999999999998876653
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.73 E-value=4.2e-08 Score=87.86 Aligned_cols=120 Identities=13% Similarity=0.117 Sum_probs=93.9
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCC-----CceEEEEcccCCCC--
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQ-----DHIRLYLCDYRQLP-- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~-----~~v~~~~~d~~~~~-- 132 (288)
....+++++|.+|||+.+|.|+=+.++++. ....|+++|+++.-++..+++++..+.. .++.+...|...++
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 344567889999999999999999999886 3347999999999999999999877642 47899999998876
Q ss_pred CCCCCCEEEEccchhh---------------hCHh-------hHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 133 KAKKYDRIISCEMMEA---------------VGHE-------YMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~---------------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
..+.||.|++...+.. ..+. -..+++..+.++|||||+++.++.+...
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 5679999998643321 0111 1246788999999999999998887544
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.72 E-value=5.2e-08 Score=84.33 Aligned_cols=123 Identities=9% Similarity=0.033 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHcC-CCCCCEEEEECCcccHHHHHHHHc------cCCEEEEEcCCHH-------------------
Q 048309 50 LKVAQMRKHSLLIEKAR-VSKEHEVLEIGCGWGTFAIEVVRQ------TGCNYTGITLSAE------------------- 103 (288)
Q Consensus 50 l~~a~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~la~~------~~~~v~giD~s~~------------------- 103 (288)
+...+...+..+++.+. ...+..|||+|+..|..+..++.. ++.+|+++|..+.
T Consensus 86 v~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~ 165 (282)
T 2wk1_A 86 IGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHR 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGG
T ss_pred cCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccc
Confidence 44566667777777653 234569999999999999888654 2678999996421
Q ss_pred -------HHHHHHHHHHHcCCC-CceEEEEcccCC-CC--CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 104 -------QMKYAEMKVNEAGLQ-DHIRLYLCDYRQ-LP--KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 104 -------~~~~a~~~~~~~g~~-~~v~~~~~d~~~-~~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
.++.++++++..|+. ++++++.+|+.+ ++ +.++||+|+...-.+ +....+++.+...|+|||+++
T Consensus 166 ~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~pGGiIv 241 (282)
T 2wk1_A 166 RNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSVGGYVI 241 (282)
T ss_dssp GHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEEEEEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCCCEEEE
Confidence 467789999999984 799999999976 34 357899999986532 345678999999999999999
Q ss_pred EEee
Q 048309 173 LQFS 176 (288)
Q Consensus 173 ~~~~ 176 (288)
+.+.
T Consensus 242 ~DD~ 245 (282)
T 2wk1_A 242 VDDY 245 (282)
T ss_dssp ESSC
T ss_pred EcCC
Confidence 8654
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.67 E-value=9.6e-09 Score=87.78 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=77.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc--ccCCCC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC--DYRQLP 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~--d~~~~~ 132 (288)
-++.++.++..+.++.+|||||||+|.++..+++. +...|+|+|++..+...+... ...+ .++..... |+..+
T Consensus 77 fKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l- 152 (282)
T 3gcz_A 77 AKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNM- 152 (282)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGS-
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhc-
Confidence 46667777777889999999999999999998865 445799999976532111100 0011 13333333 33333
Q ss_pred CCCCCCEEEEccchh----hhCHhhHHHHHHHHhcccccC--cEEEEEeec
Q 048309 133 KAKKYDRIISCEMME----AVGHEYMEEYFGCCESLLAKD--GLLVLQFSS 177 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~----~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~ 177 (288)
...++|+|+|..+.. .+.......+++-+.++|+|| |.|++-.+.
T Consensus 153 ~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 153 EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 457899999987655 121111123577788999999 999997765
No 284
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.56 E-value=1.3e-07 Score=81.24 Aligned_cols=85 Identities=13% Similarity=0.138 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---- 132 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---- 132 (288)
.+..+++.+.++++..++|.+||.|+.+..+++. +.+|+|+|.++.+++.+++ ++. ++++++++|+.+++
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHH
Confidence 3567788888889999999999999999999997 7799999999999999988 543 48999999998874
Q ss_pred --CCCCCCEEEEccchh
Q 048309 133 --KAKKYDRIISCEMME 147 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~ 147 (288)
..+++|.|++...+.
T Consensus 84 ~~g~~~vDgIL~DLGvS 100 (285)
T 1wg8_A 84 ALGVERVDGILADLGVS 100 (285)
T ss_dssp HTTCSCEEEEEEECSCC
T ss_pred HcCCCCcCEEEeCCccc
Confidence 125799999865443
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.53 E-value=2.4e-07 Score=89.87 Aligned_cols=107 Identities=7% Similarity=0.003 Sum_probs=77.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHcc----CCEEEEEcCCHHHHHHH--HHHHHH----cCCCCceEEEEcccCCCC--CCC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQT----GCNYTGITLSAEQMKYA--EMKVNE----AGLQDHIRLYLCDYRQLP--KAK 135 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~----~~~v~giD~s~~~~~~a--~~~~~~----~g~~~~v~~~~~d~~~~~--~~~ 135 (288)
.++.+|||.|||+|.++..+++.. ..+++|+|+++.+++.| +.++.. .++ ....+...|+.... ..+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~~~~~~~ 398 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSLNPEDFA 398 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGCCGGGGT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcccccccC
Confidence 467899999999999999998763 24799999999999999 444433 233 12456667776643 457
Q ss_pred CCCEEEEccchhh-hC-H-------------------------hhHHHHHHHHhcccccCcEEEEEe
Q 048309 136 KYDRIISCEMMEA-VG-H-------------------------EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 136 ~fD~I~~~~~l~~-~~-~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+||+|+++..+.. .. . .....+++.+.+.|+|||++.+..
T Consensus 399 kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 399 NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp TEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 8999999877621 00 0 013457889999999999998844
No 286
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.52 E-value=1.2e-07 Score=84.81 Aligned_cols=108 Identities=18% Similarity=0.205 Sum_probs=81.5
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc---CC----CCceEEEEcccCCCC-----CCC
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA---GL----QDHIRLYLCDYRQLP-----KAK 135 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~---g~----~~~v~~~~~d~~~~~-----~~~ 135 (288)
.++++||-||.|.|..+..+.+++..+|+.||+++.+++.|++.+... .. .++++++.+|...+- ..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 356899999999999999999886679999999999999999875321 01 135899999997643 346
Q ss_pred CCCEEEEccch-------hhhCH-hhHHHHHHHHhcccccCcEEEEEe
Q 048309 136 KYDRIISCEMM-------EAVGH-EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 136 ~fD~I~~~~~l-------~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+||+|+....- ..... .-..++++.+.+.|+|||+++.+.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 89999987421 11111 123678999999999999998754
No 287
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.52 E-value=1.5e-06 Score=78.26 Aligned_cols=146 Identities=16% Similarity=0.176 Sum_probs=91.5
Q ss_pred CCEEEEECCcccHHHHHHHHc------------------cCCEEEEEcCC-----------HHHHHHHHHHHHHcCCCCc
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ------------------TGCNYTGITLS-----------AEQMKYAEMKVNEAGLQDH 120 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~------------------~~~~v~giD~s-----------~~~~~~a~~~~~~~g~~~~ 120 (288)
..+|+|+||++|.++..+... +..+|...|+- +.+.+..++ ..|-..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 578999999999998877653 23468888876 444433222 2221112
Q ss_pred eEEEEcccCCC---C-CCCCCCEEEEccchhhhCHh-------------------------------------hHHHHHH
Q 048309 121 IRLYLCDYRQL---P-KAKKYDRIISCEMMEAVGHE-------------------------------------YMEEYFG 159 (288)
Q Consensus 121 v~~~~~d~~~~---~-~~~~fD~I~~~~~l~~~~~~-------------------------------------~~~~~l~ 159 (288)
.-++.+....+ . +.+++|+|+++.++|+++.. +...+++
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35666655543 2 78999999999999997321 1223477
Q ss_pred HHhcccccCcEEEEEeecCCCc--ccc---cccC-chh----------hHhhhccCCCCCCCHHHHHHHHHHcCCh
Q 048309 160 CCESLLAKDGLLVLQFSSTPDA--RYN---EYRL-SSD----------FIKEYIFPGGCLPSLSRITSAMAAASSL 219 (288)
Q Consensus 160 ~~~~~LkpgG~l~~~~~~~~~~--~~~---~~~~-~~~----------~~~~~i~~~~~~p~~~~~~~~~~~~~~~ 219 (288)
...+.|+|||++++...+.+.. ... .... ... -+..+..| ...|+.+++.+.+++.++|
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P-~y~ps~~E~~~~le~~g~F 284 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVP-IYAPSTEEVKRIVEEEGSF 284 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCS-BCCCCHHHHHHHHHHHCSE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCc-ccCCCHHHHHHHHHHcCCc
Confidence 7799999999999999887654 211 0000 000 01112223 3568899999888887544
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.39 E-value=1.8e-07 Score=80.05 Aligned_cols=106 Identities=16% Similarity=0.190 Sum_probs=71.5
Q ss_pred CCCCEEEEECCcccHHHHHHHH--------cc-----CCEEEEEcCCH---HHHH-----------HHHHHHHHc-----
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVR--------QT-----GCNYTGITLSA---EQMK-----------YAEMKVNEA----- 115 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~--------~~-----~~~v~giD~s~---~~~~-----------~a~~~~~~~----- 115 (288)
.++.+|||||+|+|..+..+++ .+ ..+++++|..| +.++ .+++.++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 4567999999999998877654 22 14899999776 4444 556665531
Q ss_pred -----CCC---CceEEEEcccCC-CC-CC----CCCCEEEEccchhhhCHh-hHHHHHHHHhcccccCcEEEE
Q 048309 116 -----GLQ---DHIRLYLCDYRQ-LP-KA----KKYDRIISCEMMEAVGHE-YMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 116 -----g~~---~~v~~~~~d~~~-~~-~~----~~fD~I~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.+. .+++++.+|+.+ ++ .+ ..||+|+....-..-.++ -..++++.+.++|+|||+++.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 011 367899999877 33 22 279999986421111111 136799999999999998884
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.36 E-value=1.3e-06 Score=77.96 Aligned_cols=94 Identities=4% Similarity=0.008 Sum_probs=66.5
Q ss_pred CCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccc
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEM 145 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~ 145 (288)
+.+|.++||+||++|+++..++++ +.+|++||..+ +-. .+... ++|+++++|...+. ..+.+|+|+|.-+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~-l~~----~l~~~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGP-MAQ----SLMDT---GQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT-TCEEEEECSSC-CCH----HHHTT---TCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhh-cCh----hhccC---CCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 568999999999999999999987 78999999764 111 11111 47999999999887 5578999999766
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
... ......+.++...+..++.++
T Consensus 280 ~~p---~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 280 EKP---AKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp SCH---HHHHHHHHHHHHTTSCSEEEE
T ss_pred CCh---HHhHHHHHHHHhccccceEEE
Confidence 432 333444444444444445443
No 290
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.35 E-value=5.2e-06 Score=68.89 Aligned_cols=123 Identities=16% Similarity=0.197 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-ccCCC
Q 048309 54 QMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DYRQL 131 (288)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~ 131 (288)
..-++..+.++..+.++.+|+|+||++|.++.+.+.. ...+|+|+|+...-.+. -...+..|+ ..+++..+ |+..+
T Consensus 63 a~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~-P~~~~s~gw-n~v~fk~gvDv~~~ 140 (267)
T 3p8z_A 63 GSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEE-PVPMSTYGW-NIVKLMSGKDVFYL 140 (267)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCC-CCCCCCTTT-TSEEEECSCCGGGC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccC-cchhhhcCc-CceEEEeccceeec
Confidence 3356777788878889999999999999999988887 33479999986642210 001123344 46899999 98776
Q ss_pred CCCCCCCEEEEccchhhhCH----hhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 132 PKAKKYDRIISCEMMEAVGH----EYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
++ .++|+|+|.-.=..-.+ +.-..+++-+.++|++ |-|++-.+....
T Consensus 141 ~~-~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 141 PP-EKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp CC-CCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred CC-ccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 65 67999999643211111 1123367777899998 788886555444
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.35 E-value=5.1e-07 Score=77.67 Aligned_cols=118 Identities=15% Similarity=0.143 Sum_probs=73.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K 133 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~ 133 (288)
-++..+.++--+.++.+|||+||++|.++..+++. ....|+|+|+...+...... ....+ .++.....++.... .
T Consensus 68 ~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~--~~iv~~~~~~di~~l~ 144 (300)
T 3eld_A 68 AKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG--WNIVKFKDKSNVFTMP 144 (300)
T ss_dssp HHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT--GGGEEEECSCCTTTSC
T ss_pred HHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC--CceEEeecCceeeecC
Confidence 35556666633567889999999999999999975 34478999987532100000 00001 12333333222222 4
Q ss_pred CCCCCEEEEccchhhhCHh-----hHHHHHHHHhcccccC-cEEEEEeec
Q 048309 134 AKKYDRIISCEMMEAVGHE-----YMEEYFGCCESLLAKD-GLLVLQFSS 177 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~-----~~~~~l~~~~~~Lkpg-G~l~~~~~~ 177 (288)
++.+|+|+|..+.. .+.. ....++.-+.++|+|| |.|++..+.
T Consensus 145 ~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 145 TEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 57899999976655 2211 1133477788999999 999997665
No 292
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.32 E-value=6.6e-07 Score=68.96 Aligned_cols=87 Identities=9% Similarity=0.011 Sum_probs=62.4
Q ss_pred CCCEEEEECCccc-HHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCC--CCCCEEEEccc
Q 048309 69 KEHEVLEIGCGWG-TFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKA--KKYDRIISCEM 145 (288)
Q Consensus 69 ~~~~vLDiGcG~G-~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~--~~fD~I~~~~~ 145 (288)
++.+|||||||.| ..+..|+++.+..|+++|+++..++ +++.|+.+.... +.||+|++...
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIYsirP 98 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIYSIRP 98 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEEEESC
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc----------------eEEccCCCCcccccCCcCEEEEcCC
Confidence 5679999999999 6999999755889999999996543 888999885522 58999988643
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
- .++...+.++.+. -|.-+++...+.
T Consensus 99 P-----~El~~~i~~lA~~--v~adliI~pL~~ 124 (153)
T 2k4m_A 99 P-----AEIHSSLMRVADA--VGARLIIKPLTG 124 (153)
T ss_dssp C-----TTTHHHHHHHHHH--HTCEEEEECBTT
T ss_pred C-----HHHHHHHHHHHHH--cCCCEEEEcCCC
Confidence 2 3334444444332 377788866553
No 293
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.32 E-value=7.4e-07 Score=79.63 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=77.4
Q ss_pred CCCEEEEECCcccHHHHHHHHc-----------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-----------------TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ- 130 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-----------------~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~- 130 (288)
..-+|+|+||++|.++..+... +..+|+..|+-.......-+.+....-..+.-++.+....
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999877654332 2357889998777766555444321000022444444433
Q ss_pred --CC-CCCCCCEEEEccchhhhCH-------------------------------hhHHHHHHHHhcccccCcEEEEEee
Q 048309 131 --LP-KAKKYDRIISCEMMEAVGH-------------------------------EYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 131 --~~-~~~~fD~I~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
-. +.+++|+|+++.++|+++. .+...+++...+.|+|||++++...
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 23 7899999999999999732 2345678889999999999999988
Q ss_pred cCCCc
Q 048309 177 STPDA 181 (288)
Q Consensus 177 ~~~~~ 181 (288)
+.++.
T Consensus 211 gr~~~ 215 (359)
T 1m6e_X 211 GRRSE 215 (359)
T ss_dssp ECSSS
T ss_pred cCCCC
Confidence 77654
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.30 E-value=4.1e-06 Score=71.75 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccC-CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-ccCCC
Q 048309 54 QMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTG-CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DYRQL 131 (288)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~ 131 (288)
-.-++..+.++..+.++.+||||||++|.++.+++...+ ..|+|+|+...--+.- ...+..++ .-+.+..+ |+..+
T Consensus 79 ~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w-~lV~~~~~~Dv~~l 156 (321)
T 3lkz_A 79 GTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGW-NIVTMKSGVDVFYR 156 (321)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTG-GGEEEECSCCTTSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCC-cceEEEeccCHhhC
Confidence 335667778887788999999999999999998887733 4699999876411000 00011222 24788887 88777
Q ss_pred CCCCCCCEEEEccchhhhCHh-----hHHHHHHHHhcccccC-cEEEEEeecC
Q 048309 132 PKAKKYDRIISCEMMEAVGHE-----YMEEYFGCCESLLAKD-GLLVLQFSST 178 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~-----~~~~~l~~~~~~Lkpg-G~l~~~~~~~ 178 (288)
++ ..+|+|+|.-. +.-+.. .-..+|+-+.++|++| |-|++-.+..
T Consensus 157 ~~-~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 157 PS-ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CC-CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CC-CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 65 67999999754 322111 1123677778899999 8888866554
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.29 E-value=6.9e-06 Score=77.39 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=86.5
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--------------cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceE
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--------------TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIR 122 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--------------~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~ 122 (288)
....+++.+.+.++.+|+|.+||+|.+.....++ ....++|+|+++.+...|+.++--.|.. ...
T Consensus 205 Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~ 283 (530)
T 3ufb_A 205 VVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPR 283 (530)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCE
T ss_pred HHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-ccc
Confidence 3455667777888899999999999998776543 1246999999999999999988877873 467
Q ss_pred EEEcccCCCC-----CCCCCCEEEEccchhhh-------------C-HhhHHHHHHHHhcccc-------cCcEEEEEe
Q 048309 123 LYLCDYRQLP-----KAKKYDRIISCEMMEAV-------------G-HEYMEEYFGCCESLLA-------KDGLLVLQF 175 (288)
Q Consensus 123 ~~~~d~~~~~-----~~~~fD~I~~~~~l~~~-------------~-~~~~~~~l~~~~~~Lk-------pgG~l~~~~ 175 (288)
+..+|....+ ...+||+|+++..+.-- + ...-..++..+.+.|| |||++.+..
T Consensus 284 I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 284 IDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp EECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred ccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 8888887654 23579999999776311 0 0112346677777775 799988854
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.22 E-value=1.2e-06 Score=73.72 Aligned_cols=115 Identities=16% Similarity=0.196 Sum_probs=71.4
Q ss_pred HHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccC-CEEEEEcCCHHHHHHHHHHHHH--cCCCCceEEEEc-ccCC
Q 048309 55 MRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTG-CNYTGITLSAEQMKYAEMKVNE--AGLQDHIRLYLC-DYRQ 130 (288)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~giD~s~~~~~~a~~~~~~--~g~~~~v~~~~~-d~~~ 130 (288)
.-++.++-++.-++++.+|+|+||+.|.++..+++..+ ..|.|.++.... . ... ... .|+ .-+++.++ |+.+
T Consensus 59 ayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P-~~~~~~Gv-~~i~~~~G~Df~~ 134 (269)
T 2px2_A 59 TAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEP-MLMQSYGW-NIVTMKSGVDVFY 134 (269)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCC-CCCCSTTG-GGEEEECSCCGGG
T ss_pred HHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCC-CcccCCCc-eEEEeeccCCccC
Confidence 34566666666678899999999999999999988611 133344333210 0 000 000 111 11355557 9987
Q ss_pred CCCCCCCCEEEEccch-------hhhCHhhHHHHHHHHhcccccCc-EEEEEeec
Q 048309 131 LPKAKKYDRIISCEMM-------EAVGHEYMEEYFGCCESLLAKDG-LLVLQFSS 177 (288)
Q Consensus 131 ~~~~~~fD~I~~~~~l-------~~~~~~~~~~~l~~~~~~LkpgG-~l~~~~~~ 177 (288)
++ +..+|+|+|.-+- .|. ..+. ++.-+.++|+||| .|++-.+.
T Consensus 135 ~~-~~~~DvVLSDMAPnSG~~~vD~~--Rs~~-aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 135 KP-SEISDTLLCDIGESSPSAEIEEQ--RTLR-ILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp SC-CCCCSEEEECCCCCCSCHHHHHH--HHHH-HHHHHHHHHTTCCSEEEEEESC
T ss_pred CC-CCCCCEEEeCCCCCCCccHHHHH--HHHH-HHHHHHHHhhcCCcEEEEEECC
Confidence 55 3579999996532 222 1222 6777789999999 99987766
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.10 E-value=1.2e-05 Score=70.07 Aligned_cols=58 Identities=21% Similarity=0.164 Sum_probs=49.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA 115 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~ 115 (288)
..+..+++... .++..|||++||+|..+..+++. +.+++|+|+++.+++.|+++++..
T Consensus 223 ~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 223 ELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 34566666665 57889999999999999998875 789999999999999999998765
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.89 E-value=1e-05 Score=71.03 Aligned_cols=86 Identities=10% Similarity=0.095 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-- 132 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-- 132 (288)
.+..+++.+.++++..++|..||.|+.+..+++. +..+|+|+|.++.+++.++ ++ . ..+++++.+++.++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~--~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D--DPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C--CTTEEEEESCGGGHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c--CCcEEEEeCCHHHHHHH
Confidence 4578889999999999999999999999999987 4579999999999999884 33 1 258999999998864
Q ss_pred --C---CCCCCEEEEccchh
Q 048309 133 --K---AKKYDRIISCEMME 147 (288)
Q Consensus 133 --~---~~~fD~I~~~~~l~ 147 (288)
. .+++|.|+....+.
T Consensus 120 L~~~g~~~~vDgILfDLGVS 139 (347)
T 3tka_A 120 VAERDLIGKIDGILLDLGVS 139 (347)
T ss_dssp HHHTTCTTCEEEEEEECSCC
T ss_pred HHhcCCCCcccEEEECCccC
Confidence 1 13699999876543
No 299
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.68 E-value=0.0001 Score=65.67 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=59.2
Q ss_pred HHHHHHHHHcCCCC------CCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc
Q 048309 56 RKHSLLIEKARVSK------EHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY 128 (288)
Q Consensus 56 ~~~~~l~~~~~~~~------~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~ 128 (288)
...+.+++.+++.+ +..|||||.|.|.++..|++. ...+|+++|+++..+...++.. . .++++++.+|+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~ 114 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCc
Confidence 45567777777653 589999999999999999985 3468999999999999888876 2 25899999999
Q ss_pred CCC
Q 048309 129 RQL 131 (288)
Q Consensus 129 ~~~ 131 (288)
.++
T Consensus 115 l~~ 117 (353)
T 1i4w_A 115 YDW 117 (353)
T ss_dssp TCH
T ss_pred cch
Confidence 765
No 300
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.62 E-value=0.00015 Score=61.89 Aligned_cols=59 Identities=25% Similarity=0.298 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAG 116 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g 116 (288)
..+..+++... .++..|||..||+|..+....+. +.+++|+|+++..++.++++++..+
T Consensus 200 ~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~-gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 200 DLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL-GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 34556666554 67889999999999999988774 8899999999999999999987654
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.56 E-value=0.0011 Score=58.09 Aligned_cols=120 Identities=14% Similarity=0.146 Sum_probs=88.0
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC--CCceEEEEcccCCCC--
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL--QDHIRLYLCDYRQLP-- 132 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~-- 132 (288)
.+...+..+-......|++||||-=.....+....+..++=|| .|..++..++.+.+.+. +.+..++.+|+.+ .
T Consensus 90 ~~d~~v~~~~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~ 167 (310)
T 2uyo_A 90 FFDTYFNNAVIDGIRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWP 167 (310)
T ss_dssp HHHHHHHHHHHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHH
T ss_pred HHHHHHHHHHHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHH
Confidence 4444444432122357999999987766655422247899999 59999999999976442 3578899999986 3
Q ss_pred ---CC-----CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 133 ---KA-----KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 133 ---~~-----~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.. ...=++++.++++++++++...+++.+...+.||+.+++.....
T Consensus 168 ~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 168 PALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp HHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred HHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 11 23447788899999998899999999999999999999876543
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.53 E-value=0.0004 Score=59.54 Aligned_cols=112 Identities=18% Similarity=0.156 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHc-----CCCCCCEEEEECC------cccHHHHHHHHc-c-CCEEEEEcCCHHHHHHHHHHHHHcCCCCc
Q 048309 54 QMRKHSLLIEKA-----RVSKEHEVLEIGC------GWGTFAIEVVRQ-T-GCNYTGITLSAEQMKYAEMKVNEAGLQDH 120 (288)
Q Consensus 54 ~~~~~~~l~~~~-----~~~~~~~vLDiGc------G~G~~~~~la~~-~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~ 120 (288)
...+..++++.+ ..+.+.+|||+|+ .+|.. .+.+. + ++.|+++|+.+-. .. ..
T Consensus 89 nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-----------sd-a~ 154 (344)
T 3r24_A 89 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-----------SD-AD 154 (344)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-----------CS-SS
T ss_pred eHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-----------cC-CC
Confidence 344556666665 3567899999996 67774 22222 3 3599999997721 11 12
Q ss_pred eEEEEcccCCCCCCCCCCEEEEccchhhh---C------HhhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 121 IRLYLCDYRQLPKAKKYDRIISCEMMEAV---G------HEYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 121 v~~~~~d~~~~~~~~~fD~I~~~~~l~~~---~------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
.++++|..+....++||+|+|.-.-... . ..-.+.++.-+.+.|+|||.|++-.+-...
T Consensus 155 -~~IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 155 -STLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp -EEEESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred -eEEEccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 4599998776656899999996432111 0 012456677788999999999997665443
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.38 E-value=0.0016 Score=57.64 Aligned_cols=110 Identities=16% Similarity=0.223 Sum_probs=85.1
Q ss_pred CCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcC--------------------CCCceEEEEc
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAG--------------------LQDHIRLYLC 126 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g--------------------~~~~v~~~~~ 126 (288)
.+...|+.+|||.......+... ++..++-||. |+.++.-++.+.+.+ .+.+.+++..
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 35578999999999998888764 5667888887 888888877776652 1357899999
Q ss_pred ccCCCC----------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 127 DYRQLP----------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 127 d~~~~~----------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
|+.+.. ..+...++++-+++.+++++...++++.+.+.. |+|.+++.+...+
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 998731 124567899999999999999999999998877 7777765555444
No 304
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.27 E-value=8.1e-05 Score=63.89 Aligned_cols=103 Identities=16% Similarity=0.046 Sum_probs=80.1
Q ss_pred CCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-----CCCCCCCEEEEcc
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-----PKAKKYDRIISCE 144 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-----~~~~~fD~I~~~~ 144 (288)
+..+||+=+|+|.+++.+.+. +.+++.+|.++..++..+++++. .++++++..|.... ++..+||+|++..
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred CCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 457899999999999998884 68999999999999999988865 25799999997542 2445799999998
Q ss_pred chhhhCHhhHHHHHHHHhc--ccccCcEEEEEeecC
Q 048309 145 MMEAVGHEYMEEYFGCCES--LLAKDGLLVLQFSST 178 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 178 (288)
.++.- .+....++.+.+ .+.|+|++++-....
T Consensus 168 PYe~k--~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 168 SYERK--EEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp CCCST--THHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred CCCCC--cHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 87743 355666655544 557899999855443
No 305
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.25 E-value=0.001 Score=59.48 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=70.3
Q ss_pred HHHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----C-
Q 048309 60 LLIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----P- 132 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~- 132 (288)
.+.+..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |.. .++..+-.++ .
T Consensus 181 al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKE 253 (371)
T ss_dssp HHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHH
Confidence 344566788999999999987 8899999887666 799999999988887654 321 2332221111 1
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|+++|++++..
T Consensus 254 ~~~gg~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 254 ITDGGVNFALESTGS--------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp HTTSCEEEEEECSCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred hcCCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEeC
Confidence 22379999864321 245677789999999998743
No 306
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.02 E-value=0.0003 Score=77.27 Aligned_cols=102 Identities=19% Similarity=0.226 Sum_probs=55.4
Q ss_pred CCCCEEEEECCcccHHHHHHHHcc------CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C-CCCCCCE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQT------GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P-KAKKYDR 139 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~------~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-~~~~fD~ 139 (288)
.+..+|||||.|+|..+..+.+.. ..+++..|+|+...+.++++++.. +++.-..|..+. + ..++||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~----di~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL----HVTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH----TEEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc----ccccccccccccccCCCCceeE
Confidence 356799999999998766554431 137899999998888888777653 233322344332 1 3467999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|++..+++.. .+....+.+++++|||||.+++..
T Consensus 1315 via~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1315 LVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEECC----------------------CCEEEEEE
T ss_pred EEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999999766 677889999999999999998865
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.01 E-value=0.0022 Score=57.04 Aligned_cols=99 Identities=22% Similarity=0.222 Sum_probs=68.7
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcc---cCC----CC
Q 048309 62 IEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCD---YRQ----LP 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d---~~~----~~ 132 (288)
++..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++ .|.+ .++..+ ..+ +.
T Consensus 164 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHH
Confidence 3566788999999999986 8899999987677 89999999988877754 3432 233222 011 11
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|++||++++..
T Consensus 237 ~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 237 GQLGCKPEVTIECTGA--------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HHHTSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEe
Confidence 12579999865321 234566778999999998743
No 308
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.98 E-value=0.00097 Score=59.11 Aligned_cols=97 Identities=23% Similarity=0.223 Sum_probs=69.5
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCE
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~ 139 (288)
.+....+++|.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.. .++ .+...+. ..+|+
T Consensus 168 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~~~~--~~~D~ 237 (348)
T 3two_A 168 PLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVK---HFY-TDPKQCK--EELDF 237 (348)
T ss_dssp HHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCS---EEE-SSGGGCC--SCEEE
T ss_pred HHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCC---eec-CCHHHHh--cCCCE
Confidence 44556888999999999986 889999998878899999999988877754 3432 233 3333332 37999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
|+-...-. ..++.+.+.|+++|++++..
T Consensus 238 vid~~g~~--------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 238 IISTIPTH--------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEECCCSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCcH--------HHHHHHHHHHhcCCEEEEEC
Confidence 98643211 13555678999999999853
No 309
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.96 E-value=0.0064 Score=51.52 Aligned_cols=115 Identities=11% Similarity=0.036 Sum_probs=77.5
Q ss_pred HHHHHHcCCCCCCEEEEECCcccHHHHHHHHc--------cCCEEEEEc-----CCHH-------------------HHH
Q 048309 59 SLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--------TGCNYTGIT-----LSAE-------------------QMK 106 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--------~~~~v~giD-----~s~~-------------------~~~ 106 (288)
..+.+.+...+| .|+|+||-.|..+..++.- ...+|+++| +.+. ..+
T Consensus 60 ~~l~~~i~~vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~ 138 (257)
T 3tos_A 60 DALYRQVLDVPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPA 138 (257)
T ss_dssp HHHHHHTTTSCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHH
T ss_pred HHHHHHhhCCCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHH
Confidence 455555543444 8999999999988886541 246899999 3210 011
Q ss_pred HHHHHH------HHcCC-CCceEEEEcccCCCC-------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 107 YAEMKV------NEAGL-QDHIRLYLCDYRQLP-------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 107 ~a~~~~------~~~g~-~~~v~~~~~d~~~~~-------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
..++.+ +..+. +++++++.+++.+.- +..++|+|+...-.+ +.....++.+...|+|||+++
T Consensus 139 ~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y----~~t~~~le~~~p~l~~GGvIv 214 (257)
T 3tos_A 139 YLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLY----EPTKAVLEAIRPYLTKGSIVA 214 (257)
T ss_dssp HHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCH----HHHHHHHHHHGGGEEEEEEEE
T ss_pred HHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCccc----chHHHHHHHHHHHhCCCcEEE
Confidence 112111 22344 478999999997632 345799999987532 455678889999999999999
Q ss_pred EEeecC
Q 048309 173 LQFSST 178 (288)
Q Consensus 173 ~~~~~~ 178 (288)
+.++..
T Consensus 215 ~DD~~~ 220 (257)
T 3tos_A 215 FDELDN 220 (257)
T ss_dssp ESSTTC
T ss_pred EcCCCC
Confidence 977643
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.93 E-value=0.0019 Score=57.00 Aligned_cols=99 Identities=12% Similarity=0.179 Sum_probs=69.3
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CC
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KA 134 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~ 134 (288)
.+....++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.. .++..+-.++. ..
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhC
Confidence 34666788999999999886 999999998878899999999998887755 3431 22222111111 12
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+.+|+|+-... -...++.+.+.|+++|++++.
T Consensus 231 g~~d~vid~~g--------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 231 GGAHGVLVTAV--------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp SSEEEEEESSC--------CHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEEeCC--------CHHHHHHHHHHhccCCEEEEe
Confidence 36888876422 134566777899999999874
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.92 E-value=0.002 Score=57.13 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=70.7
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL------- 131 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~------- 131 (288)
.++...++++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++. |. -.++..+-.++
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GA---TDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TC---CEEECGGGSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CC---ceEEcCCCcCHHHHHHHH
Confidence 34677888999999999986 8999999988676 799999999888877664 43 12332221111
Q ss_pred CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 132 PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.....+|+|+-...- ...++.+.+.|++||++++...
T Consensus 231 t~g~g~D~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 231 TDGKGVDKVVIAGGD--------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTTCCEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCCC--------hHHHHHHHHHHhcCCEEEEecc
Confidence 123479999864221 2345667789999999987543
No 312
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.91 E-value=0.0043 Score=55.47 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=69.6
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC--------
Q 048309 62 IEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-------- 131 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-------- 131 (288)
++...++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |.. .++...-.++
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GAT---ATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS---EEECTTSSCHHHHHHSTT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC---EEECCCCcCHHHHHHhhh
Confidence 4677888999999999886 8899999988777 899999999988877653 432 2222111111
Q ss_pred -CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 -PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 -~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+.+|+|+-.-. -...++.+.+.|++||++++..
T Consensus 248 ~~~~gg~Dvvid~~G--------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 248 GLVPGGVDVVIECAG--------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SSSTTCEEEEEECSC--------CHHHHHHHHHHEEEEEEEEECS
T ss_pred hccCCCCCEEEECCC--------CHHHHHHHHHHhccCCEEEEEe
Confidence 11247999986422 1345667778999999998743
No 313
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.86 E-value=0.0037 Score=56.40 Aligned_cols=105 Identities=18% Similarity=0.091 Sum_probs=70.4
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C------
Q 048309 62 IEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P------ 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~------ 132 (288)
+...+++++.+||-+|||. |..+..+++..++ +|+++|.+++.++.+++ .|. +++..+-.+. .
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 178 CVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF----ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC----EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----cEEcCCCcchHHHHHHHH
Confidence 3667888999999999987 9999999987677 89999999998877653 342 3332222222 1
Q ss_pred -CCCCCCEEEEccchhhhC------HhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 -KAKKYDRIISCEMMEAVG------HEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~------~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
....+|+|+-.-.-.... .......++.+.+.|++||++++.
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 223799998654322100 001124577778999999998864
No 314
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.80 E-value=0.0033 Score=55.97 Aligned_cols=102 Identities=13% Similarity=0.115 Sum_probs=71.3
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-----ccCC---
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCN-YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-----DYRQ--- 130 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~-v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-----d~~~--- 130 (288)
.++..++++|.+||-+|+|. |..+.++++..+++ |+++|.+++..+.+++. .. .-+.+... |+.+
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~ 245 (363)
T 3m6i_A 171 GLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIV 245 (363)
T ss_dssp HHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHH
Confidence 34667888999999999886 89999999887776 99999999999988875 21 11232211 1111
Q ss_pred -CCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 131 -LPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 131 -~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
......+|+|+-.-.- ...++.+.+.|++||++++..
T Consensus 246 ~~t~g~g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 246 ESFGGIEPAVALECTGV--------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HHTSSCCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECC
T ss_pred HHhCCCCCCEEEECCCC--------hHHHHHHHHHhcCCCEEEEEc
Confidence 1124579999964321 235666778999999998754
No 315
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.79 E-value=0.0092 Score=52.82 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=68.9
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc-CCCC-------
Q 048309 62 IEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY-RQLP------- 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~-~~~~------- 132 (288)
+...+++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.+ .++..+- .+..
T Consensus 161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~ 233 (352)
T 1e3j_A 161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERI 233 (352)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHh
Confidence 3566788999999999886 888899988778889999999988877754 3432 2222211 1211
Q ss_pred C---CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 K---AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ~---~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
. ...+|+|+-...- ...++.+.+.|+++|+++...
T Consensus 234 ~~~~g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 234 RSAIGDLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HHHSSSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred ccccCCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 3579999865321 234566778999999998743
No 316
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.78 E-value=0.0064 Score=54.81 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=71.2
Q ss_pred HHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-----CC--
Q 048309 62 IEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-----LP-- 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-----~~-- 132 (288)
+...+++++.+||-+|+|. |..+.++++..++ .|+++|.+++.++.+++ .|. +.+.-.-.+ +.
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHH
Confidence 3456788999999999886 9999999988676 79999999998887754 343 333221111 11
Q ss_pred -CCCCCCEEEEccchh---------hhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMME---------AVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~---------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+|+-.-.-. |. ......++.+.+.|++||++++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKH--EAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGS--BCTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCcccccccccccc--cchHHHHHHHHHHHhcCCEEEEec
Confidence 224799998654321 11 223456778889999999998743
No 317
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.69 E-value=0.0039 Score=54.33 Aligned_cols=92 Identities=21% Similarity=0.298 Sum_probs=65.0
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEE
Q 048309 63 EKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRII 141 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~ 141 (288)
+...++++.+||-+|+|. |..+.++++..+++|++++ +++..+.+++. |. -.++ .|...+ .+.+|+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~l----Ga---~~v~-~d~~~v--~~g~Dvv~ 204 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKR----GV---RHLY-REPSQV--TQKYFAIF 204 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHH----TE---EEEE-SSGGGC--CSCEEEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHc----CC---CEEE-cCHHHh--CCCccEEE
Confidence 667788999999999975 8999999988788999999 88888877653 32 1233 242222 56899988
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
-.-.- ..+..+.+.|+++|+++..
T Consensus 205 d~~g~---------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 205 DAVNS---------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp CC----------------TTGGGEEEEEEEEEE
T ss_pred ECCCc---------hhHHHHHHHhcCCCEEEEE
Confidence 53211 1124567999999999875
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.68 E-value=0.0083 Score=48.32 Aligned_cols=94 Identities=19% Similarity=0.200 Sum_probs=63.8
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--------
Q 048309 63 EKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------- 132 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------- 132 (288)
+..+++++++||..|+ |.|..+..+++..+++|+++|.+++..+.+++ .|.. .++ |..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~~~ 102 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----LGVE---YVG--DSRSVDFADEILEL 102 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----TCCS---EEE--ETTCSTHHHHHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCC---EEe--eCCcHHHHHHHHHH
Confidence 4457788999999994 55887777777667899999999887765543 3431 122 322211
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
....+|+++.+.. ...++.+.+.|++||+++..
T Consensus 103 ~~~~~~D~vi~~~g---------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 103 TDGYGVDVVLNSLA---------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp TTTCCEEEEEECCC---------THHHHHHHHTEEEEEEEEEC
T ss_pred hCCCCCeEEEECCc---------hHHHHHHHHHhccCCEEEEE
Confidence 1246999986532 13466777999999998874
No 319
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.67 E-value=0.0037 Score=55.73 Aligned_cols=98 Identities=18% Similarity=0.153 Sum_probs=69.3
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------CC
Q 048309 63 EKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------KA 134 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------~~ 134 (288)
+...++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++. |.. .++..+-.++. ..
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~v~~~~~g 255 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL----GAD---HGINRLEEDWVERVYALTGD 255 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc----CCC---EEEcCCcccHHHHHHHHhCC
Confidence 556788999999999886 8889999888788999999999988877653 431 23332212211 23
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
..+|+|+-... ...+..+.+.|+++|++++...
T Consensus 256 ~g~D~vid~~g---------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 256 RGADHILEIAG---------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CCEEEEEEETT---------SSCHHHHHHHEEEEEEEEEECC
T ss_pred CCceEEEECCC---------hHHHHHHHHHhhcCCEEEEEec
Confidence 47999986533 1234556689999999988543
No 320
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.65 E-value=0.0045 Score=55.41 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=69.4
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcc--cCCC----C
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCD--YRQL----P 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~----~ 132 (288)
+.+...++++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++ .|.+ .++... -.++ .
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHH
Confidence 44666788999999999985 8999999988676 89999999988877654 3432 222221 1111 0
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
..+.+|+|+-.-. -...++.+.+.|++| |++++..
T Consensus 258 ~~~~gg~D~vid~~g--------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 258 DLTDGGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp HHTTSCBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred HhcCCCCCEEEECCC--------CHHHHHHHHHHhhccCCEEEEEc
Confidence 2348999986422 134567778999997 9988744
No 321
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.58 E-value=0.0074 Score=53.87 Aligned_cols=101 Identities=16% Similarity=0.103 Sum_probs=69.0
Q ss_pred HHHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc--CCC----
Q 048309 60 LLIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY--RQL---- 131 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~---- 131 (288)
.+.+..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++ .|.. .++..+- .++
T Consensus 182 ~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i 254 (373)
T 1p0f_A 182 AAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVI 254 (373)
T ss_dssp HHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHH
T ss_pred HHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHH
Confidence 344556788999999999886 8889999887676 89999999988877754 3431 2222111 111
Q ss_pred C--CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 132 P--KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 132 ~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
. ..+.+|+|+-.-.- ...++.+.+.|+++ |++++..
T Consensus 255 ~~~t~gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 255 CEKTNGGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp HHHTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHHhCCCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 1 22479999864321 24566777999999 9988743
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.57 E-value=0.0023 Score=57.22 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CC-CCCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LP-KAKKY 137 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~-~~~~f 137 (288)
.+...+++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++. |.. .++...-.+ .. ..+.+
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~g~ 258 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKAL----GAD---EVVNSRNADEMAAHLKSF 258 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TCS---EEEETTCHHHHHTTTTCE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEeccccHHHHHHhhcCC
Confidence 34456788999999999986 8889999887788999999999888877652 431 222211111 01 12579
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
|+|+-.-.-. ..++.+.+.|+++|+++..
T Consensus 259 Dvvid~~g~~--------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 259 DFILNTVAAP--------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp EEEEECCSSC--------CCHHHHHTTEEEEEEEEEC
T ss_pred CEEEECCCCH--------HHHHHHHHHhccCCEEEEe
Confidence 9998653211 1245566899999998874
No 323
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.54 E-value=0.025 Score=51.10 Aligned_cols=100 Identities=9% Similarity=0.020 Sum_probs=65.3
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------CCCCC
Q 048309 66 RVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-------PKAKK 136 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-------~~~~~ 136 (288)
.+++|.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |. -.++..+-.++ .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga---~~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GA---DHVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TC---SEEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CC---CEEEcCCCCCHHHHHHHHhCCCC
Confidence 678899999999886 8889999988777 999999999988888654 32 12332211111 12347
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+|+-.-.-.. ......++.+.+.++++|++++..
T Consensus 283 ~D~vid~~g~~~---~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 283 AKLFLEATGVPQ---LVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp CSEEEECSSCHH---HHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCEEEECCCCcH---HHHHHHHHHHHhccCCCcEEEEeC
Confidence 999986432210 012333333345559999998843
No 324
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.53 E-value=0.01 Score=52.96 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=68.6
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc--CCC----C
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY--RQL----P 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~----~ 132 (288)
+.+..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |.. .++...- .++ .
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 182 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT---ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc---eEeccccccccHHHHHH
Confidence 34556788999999999886 8888999887677 899999999888877643 431 2222110 111 1
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|+++ |++++..
T Consensus 255 ~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 255 EMTDGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp HHTTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHhCCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 12479999864321 23466777999999 9988743
No 325
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.53 E-value=0.012 Score=52.74 Aligned_cols=72 Identities=14% Similarity=0.190 Sum_probs=57.0
Q ss_pred CEEEEECCcccHHHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---------CCCCCCEE
Q 048309 71 HEVLEIGCGWGTFAIEVVRQTGCN-YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---------KAKKYDRI 140 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~~~~~-v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---------~~~~fD~I 140 (288)
.+++|+-||.|.++.-+.+. |.+ +.++|+++.+++..+.++ ++..++++|+.++. ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINF------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHC------TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhC------CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 58999999999999998776 554 669999999888777664 24678899998874 13689999
Q ss_pred EEccchhhh
Q 048309 141 ISCEMMEAV 149 (288)
Q Consensus 141 ~~~~~l~~~ 149 (288)
+....+..+
T Consensus 76 ~ggpPCQ~f 84 (376)
T 3g7u_A 76 IGGPPCQGF 84 (376)
T ss_dssp EECCCCCTT
T ss_pred EecCCCCCc
Confidence 987765544
No 326
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.51 E-value=0.0088 Score=54.30 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=52.4
Q ss_pred CCCCCEEEEECCcccHHHHHHH-Hc-c-CCEEEEEcCCHHHHHHHHHHHHH--c-CCCCceEEEEcccCCC
Q 048309 67 VSKEHEVLEIGCGWGTFAIEVV-RQ-T-GCNYTGITLSAEQMKYAEMKVNE--A-GLQDHIRLYLCDYRQL 131 (288)
Q Consensus 67 ~~~~~~vLDiGcG~G~~~~~la-~~-~-~~~v~giD~s~~~~~~a~~~~~~--~-g~~~~v~~~~~d~~~~ 131 (288)
+.++..|+|+|++.|..+..++ +. + ..+|+++|++|...+..+++++. + +.+.+++++..-+.+-
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~~ 294 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGEN 294 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECSS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEECC
Confidence 4688999999999999999888 33 2 26999999999999999999987 3 3325788887766553
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.48 E-value=0.0087 Score=53.43 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=68.3
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc--CCCC----
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY--RQLP---- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~~---- 132 (288)
+.+..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++ .|.. .++..+- .++.
T Consensus 184 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~ 256 (374)
T 1cdo_A 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLS 256 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHH
Confidence 34556788999999999875 8889999887677 89999999988887754 3431 2222110 1111
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|+++ |++++..
T Consensus 257 ~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 257 KMTNGGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp HHHTSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred HHhCCCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEc
Confidence 12479999864321 23566777999999 9988743
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.46 E-value=0.0089 Score=53.42 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=68.3
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc--CCCC----
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY--RQLP---- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~~---- 132 (288)
+.+...++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++ .|.. .++..+- .++.
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~ 259 (376)
T 1e3i_A 187 AINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVIT 259 (376)
T ss_dssp HHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHH
Confidence 34556788999999999885 8889999988677 89999999988877754 3431 2222110 1110
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|+++ |++++..
T Consensus 260 ~~~~~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 260 ELTAGGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp HHHTSCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred HHhCCCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEEC
Confidence 12479999864221 24566777999999 9988743
No 329
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.44 E-value=0.02 Score=50.44 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=65.2
Q ss_pred HHHHHcCCCCCCEEEEECCcc-cHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC----CCC
Q 048309 60 LLIEKARVSKEHEVLEIGCGW-GTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ----LPK 133 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~----~~~ 133 (288)
..++....+++.+||=+|+|. |..+..+++. .+.+|+++|.+++..+.+++. |...-+.....|..+ ...
T Consensus 154 ~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTT
T ss_pred eeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcC
Confidence 345566788999999999986 5666666665 678999999999877766543 432111111122111 112
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+|.++.... -...+....+.|+++|++++..
T Consensus 230 g~g~d~~~~~~~--------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 230 GLGVQSAIVCAV--------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp SSCEEEEEECCS--------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEEecc--------CcchhheeheeecCCceEEEEe
Confidence 335666665321 1345666778999999988743
No 330
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.44 E-value=0.0066 Score=53.49 Aligned_cols=102 Identities=12% Similarity=0.029 Sum_probs=68.7
Q ss_pred HHHHHHHcCCCCCCEEEEECCc--ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----
Q 048309 58 HSLLIEKARVSKEHEVLEIGCG--WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL---- 131 (288)
Q Consensus 58 ~~~l~~~~~~~~~~~vLDiGcG--~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---- 131 (288)
+..+.+...++++.+||-+|+| .|..+..+++..+++|+++|.+++.++.+++. |.. .++...-.++
T Consensus 133 ~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----ga~---~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 133 WVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL----GAA---YVIDTSTAPLYETV 205 (340)
T ss_dssp HHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEETTTSCHHHHH
T ss_pred HHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC----CCc---EEEeCCcccHHHHH
Confidence 3445566788899999999986 58888888887788999999999888877653 321 2222211111
Q ss_pred ---CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 ---PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ---~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.....+|+|+....-.. .....+.|+++|++++..
T Consensus 206 ~~~~~~~g~Dvvid~~g~~~---------~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGGPD---------GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp HHHTTTSCEEEEEESSCHHH---------HHHHHHTEEEEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCChh---------HHHHHHHhcCCCEEEEEe
Confidence 12347999987543221 122337899999998743
No 331
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.43 E-value=0.0049 Score=55.27 Aligned_cols=99 Identities=19% Similarity=0.183 Sum_probs=67.6
Q ss_pred HHHcC-CCCCCEEEEECCcc-cHHHHHHHHccC-CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcc---cCC----C
Q 048309 62 IEKAR-VSKEHEVLEIGCGW-GTFAIEVVRQTG-CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCD---YRQ----L 131 (288)
Q Consensus 62 ~~~~~-~~~~~~vLDiGcG~-G~~~~~la~~~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d---~~~----~ 131 (288)
+..++ ++++.+||-+|+|. |..+..+++..+ .+|++++.+++..+.+++ .|.. .++..+ -.+ +
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 187 FDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAI 259 (380)
T ss_dssp HHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH
T ss_pred HHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHH
Confidence 35567 78999999999875 888999998877 599999999988877764 3431 233222 111 1
Q ss_pred ---CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 ---PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ---~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.....+|+|+-.-.- ...++.+.+.|+++|+++...
T Consensus 260 ~~~~~g~g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 260 MDITHGRGADFILEATGD--------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp HHHTTTSCEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECC
T ss_pred HHHhCCCCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 122369999865321 124556678999999988743
No 332
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.42 E-value=0.015 Score=50.98 Aligned_cols=104 Identities=20% Similarity=0.218 Sum_probs=70.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
..+..+.+...++++.+||-+|+ |.|..+..+++..+++|++++.+++..+.+.+ +.|.. .++...-.++.
T Consensus 136 tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~ 209 (336)
T 4b7c_A 136 TAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFD---GAIDYKNEDLAA 209 (336)
T ss_dssp HHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCS---EEEETTTSCHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCC---EEEECCCHHHHH
Confidence 33444447778889999999998 45888888888778899999999987776622 23431 22221111111
Q ss_pred -----CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 -----KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -----~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+.+|+++.+..- ..+..+.+.|+++|++++.
T Consensus 210 ~~~~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 210 GLKRECPKGIDVFFDNVGG---------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp HHHHHCTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHhcCCCceEEEECCCc---------chHHHHHHHHhhCCEEEEE
Confidence 23579999865321 3567778999999999874
No 333
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.38 E-value=0.012 Score=52.60 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc--CCC----C
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY--RQL----P 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~~----~ 132 (288)
+.+..+++++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++ .|.. .++..+- .++ .
T Consensus 183 l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp HHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHH
Confidence 34556788999999999886 8888999887677 89999999988877754 3431 2222110 111 1
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccC-cEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKD-GLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 175 (288)
..+.+|+|+-.-.- ...++.+.+.|+++ |++++..
T Consensus 256 ~~~~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 256 EMSNGGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp HHTTSCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred HHhCCCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 22479999864321 23466677899999 9988743
No 334
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.37 E-value=0.0059 Score=53.87 Aligned_cols=93 Identities=20% Similarity=0.230 Sum_probs=65.1
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHcc--CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc----cc-CCCCCCCCC
Q 048309 66 RVSKEHEVLEIGCGW-GTFAIEVVRQT--GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC----DY-RQLPKAKKY 137 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~-G~~~~~la~~~--~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~----d~-~~~~~~~~f 137 (288)
++ ++.+||-+|+|. |..+..+++.. +++|+++|.+++..+.+++. |.. .++.. |. ..+.....+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----GAD---YVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----TCS---EEECHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----CCC---EEeccccchHHHHHhhcCCCc
Confidence 67 899999999975 88889998886 89999999999988877653 321 22211 11 111123479
Q ss_pred CEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 138 DRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 138 D~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
|+|+-.-.- ...++.+.+.|+++|+++..
T Consensus 240 D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT--------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC--------hHHHHHHHHHhhcCCEEEEe
Confidence 999865321 23566677899999998874
No 335
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.34 E-value=0.022 Score=50.17 Aligned_cols=98 Identities=16% Similarity=0.242 Sum_probs=67.1
Q ss_pred HHHHHcCCC------CCCEEEEE-CCc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC
Q 048309 60 LLIEKARVS------KEHEVLEI-GCG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL 131 (288)
Q Consensus 60 ~l~~~~~~~------~~~~vLDi-GcG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 131 (288)
.+.+...++ ++.+||-+ |+| .|..+..+++..+++|++++.+++.++.+++. |.. .++..+ .++
T Consensus 135 ~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~-~~~ 206 (346)
T 3fbg_A 135 TLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKM----GAD---IVLNHK-ESL 206 (346)
T ss_dssp HHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHH----TCS---EEECTT-SCH
T ss_pred HHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCc---EEEECC-ccH
Confidence 344556666 89999999 565 48899999888788999999999988887763 321 222211 111
Q ss_pred C------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 132 P------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 132 ~------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
. ....+|+|+-... -...++.+.+.|+++|+++.
T Consensus 207 ~~~~~~~~~~g~Dvv~d~~g--------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 207 LNQFKTQGIELVDYVFCTFN--------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp HHHHHHHTCCCEEEEEESSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHhCCCCccEEEECCC--------chHHHHHHHHHhccCCEEEE
Confidence 1 2357999986422 13456677789999999975
No 336
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.33 E-value=0.019 Score=51.15 Aligned_cols=97 Identities=18% Similarity=0.246 Sum_probs=67.0
Q ss_pred HHHcCCC-----CCCEEEEEC-Ccc-cHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcc--c---
Q 048309 62 IEKARVS-----KEHEVLEIG-CGW-GTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCD--Y--- 128 (288)
Q Consensus 62 ~~~~~~~-----~~~~vLDiG-cG~-G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~--- 128 (288)
.+...++ ++.+||-+| +|. |..+..+++. .+++|+++|.+++..+.+++ .|.. .++... .
T Consensus 159 ~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~ 231 (363)
T 4dvj_A 159 FDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAE 231 (363)
T ss_dssp HTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHH
T ss_pred HHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHH
Confidence 3455666 788999998 664 9999999987 68899999999988887764 3431 222211 1
Q ss_pred -CCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 129 -RQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 129 -~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.+. ..+.+|+|+-... -...++.+.+.|+++|++++.
T Consensus 232 v~~~-~~~g~Dvvid~~g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 232 VAAL-GLGAPAFVFSTTH--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp HHTT-CSCCEEEEEECSC--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred HHHh-cCCCceEEEECCC--------chhhHHHHHHHhcCCCEEEEE
Confidence 111 2357998886422 134567777999999999874
No 337
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.30 E-value=0.0082 Score=53.17 Aligned_cols=72 Identities=14% Similarity=0.131 Sum_probs=55.3
Q ss_pred CEEEEECCcccHHHHHHHHccC---CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC----CCCCCEEEEc
Q 048309 71 HEVLEIGCGWGTFAIEVVRQTG---CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK----AKKYDRIISC 143 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~~~---~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~----~~~fD~I~~~ 143 (288)
.+|+|+.||.|.++..+.+. | ..|.++|+++.+++..+.++. +..++.+|+.++.. ...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 58999999999999998875 4 369999999999998888763 34578899988751 1279999998
Q ss_pred cchhhh
Q 048309 144 EMMEAV 149 (288)
Q Consensus 144 ~~l~~~ 149 (288)
..+..+
T Consensus 76 pPCq~f 81 (343)
T 1g55_A 76 PPCQPF 81 (343)
T ss_dssp CC----
T ss_pred CCCcch
Confidence 876555
No 338
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.29 E-value=0.026 Score=49.31 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=68.0
Q ss_pred HHHHcCCCCCCEEEEEC-Cc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------
Q 048309 61 LIEKARVSKEHEVLEIG-CG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL------- 131 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~------- 131 (288)
+.+...++++.+||-+| +| .|..+..+++..+++|++++.+++.++.+++. |. -.++..+-.++
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~~~~~~~~~~~~~~~~~~ 204 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL----GA---WETIDYSHEDVAKRVLEL 204 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TC---SEEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---CEEEeCCCccHHHHHHHH
Confidence 33445788999999999 44 58899998887788999999999988877653 32 12232221211
Q ss_pred CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 132 PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.....+|+|+....- ..+..+.+.|+++|++++..
T Consensus 205 ~~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 205 TDGKKCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp TTTCCEEEEEESSCG---------GGHHHHHTTEEEEEEEEECC
T ss_pred hCCCCceEEEECCCh---------HHHHHHHHHhcCCCEEEEEe
Confidence 123479999875332 23456678999999998854
No 339
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.28 E-value=0.0028 Score=56.36 Aligned_cols=101 Identities=15% Similarity=0.142 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC-CCC--CCCC
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR-QLP--KAKK 136 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~-~~~--~~~~ 136 (288)
.+...+++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++. |.. .++..+-. ++. ..+.
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~~~ 243 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKM----GAD---HYIATLEEGDWGEKYFDT 243 (360)
T ss_dssp HHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH----TCS---EEEEGGGTSCHHHHSCSC
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc----CCC---EEEcCcCchHHHHHhhcC
Confidence 34446788999999999875 8888899887788999999998888777653 431 23322111 111 1157
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|+|+-...-. + ...++.+.+.|++||+++..
T Consensus 244 ~D~vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 244 FDLIVVCASSL--T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEEEECCSCS--T----TCCTTTGGGGEEEEEEEEEC
T ss_pred CCEEEECCCCC--c----HHHHHHHHHHhcCCCEEEEe
Confidence 99998653320 0 11234556899999998874
No 340
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.26 E-value=0.022 Score=49.89 Aligned_cols=98 Identities=20% Similarity=0.302 Sum_probs=67.1
Q ss_pred HHHHHHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC---CC-
Q 048309 59 SLLIEKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ---LP- 132 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---~~- 132 (288)
..+.+..+++++.+||-.|| |.|..+..+++..+++|+++|.+++.++.+++ .|.. .+ .|..+ +.
T Consensus 135 ~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~----~g~~---~~--~d~~~~~~~~~ 205 (333)
T 1v3u_A 135 FGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----IGFD---AA--FNYKTVNSLEE 205 (333)
T ss_dssp HHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EE--EETTSCSCHHH
T ss_pred HHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCc---EE--EecCCHHHHHH
Confidence 33445567889999999997 56888888877778899999999988776633 2321 11 23322 10
Q ss_pred -----CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 -----KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -----~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+.+|+++.+..- ..++.+.+.|++||++++.
T Consensus 206 ~~~~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 206 ALKKASPDGYDCYFDNVGG---------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp HHHHHCTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhCCCCeEEEECCCh---------HHHHHHHHHHhcCCEEEEE
Confidence 12579999875431 2367777999999999874
No 341
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.22 E-value=0.015 Score=51.28 Aligned_cols=98 Identities=22% Similarity=0.382 Sum_probs=67.4
Q ss_pred HHHcCCCCCCEEEEECCc--ccHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----C--
Q 048309 62 IEKARVSKEHEVLEIGCG--WGTFAIEVVRQT-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----P-- 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiGcG--~G~~~~~la~~~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~-- 132 (288)
+....++++.+||-+|+| .|..+..+++.. +++|+++|.+++..+.+++. |.. .++...-.+. .
T Consensus 163 l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 163 VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD---YVINASMQDPLAEIRRI 235 (347)
T ss_dssp HHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC---EEecCCCccHHHHHHHH
Confidence 445678899999999987 577888888776 89999999999888777543 321 2222111111 1
Q ss_pred CC-CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 KA-KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ~~-~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.. +.+|+++....- ...++.+.+.|+++|++++.
T Consensus 236 ~~~~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS--------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp TTTSCEEEEEESCCC--------HHHHTTGGGGEEEEEEEEEC
T ss_pred hcCCCceEEEECCCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 12 479999865321 23566778999999998874
No 342
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=96.14 E-value=0.012 Score=52.00 Aligned_cols=97 Identities=14% Similarity=0.073 Sum_probs=66.2
Q ss_pred HHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------CC
Q 048309 63 EKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-------PK 133 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-------~~ 133 (288)
...++ ++.+||-+|+|. |..+..+++..++ +|+++|.+++..+.+++. |.. .++..+-.++ ..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~---~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD---YVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS---EEECTTTSCHHHHHHHHTT
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC---EEECCCCcCHHHHHHHHcC
Confidence 55667 899999999875 8888888887677 899999999888777643 321 2222211111 11
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+|+|+..-.. ...++.+.+.|+++|+++...
T Consensus 234 g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 234 GNGVDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp TSCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 2469999865321 234566778999999988743
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.14 E-value=0.012 Score=51.83 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------
Q 048309 61 LIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------- 132 (288)
.+...+++++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ .|.. .++ |..+..
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~~~--d~~~~~~~~~~~~ 226 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----LGAD---LVV--NPLKEDAAKFMKE 226 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEE--CTTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----CCCC---EEe--cCCCccHHHHHHH
Confidence 34445788999999999874 888888888778899999999988887754 3431 222 332211
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+.+|+|+..... ...++.+.+.|+++|+++..
T Consensus 227 ~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 227 KVGGVHAAVVTAVS--------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp HHSSEEEEEESSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred HhCCCCEEEECCCC--------HHHHHHHHHHhhcCCEEEEe
Confidence 01468998865321 23466677899999998874
No 344
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.10 E-value=0.033 Score=48.45 Aligned_cols=97 Identities=19% Similarity=0.177 Sum_probs=64.6
Q ss_pred HHHHcCCCCCCEEEEEC-Cc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CC-CCCC
Q 048309 61 LIEKARVSKEHEVLEIG-CG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LP-KAKK 136 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~-~~~~ 136 (288)
.++...++++.+||-+| +| .|..+..+++..+++|++++ +++..+.+++ .|.+ .++..+-.+ +. .-..
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~g 215 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLKA----LGAE---QCINYHEEDFLLAISTP 215 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHHH----HTCS---EEEETTTSCHHHHCCSC
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHHH----cCCC---EEEeCCCcchhhhhccC
Confidence 33777889999999996 66 49999999988788999997 5554555543 3542 233222222 22 2257
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|+|+-.-. . .. +..+.+.|+++|+++..
T Consensus 216 ~D~v~d~~g-----~---~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVG-----G---DV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSC-----H---HH-HHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCC-----c---HH-HHHHHHhccCCCEEEEe
Confidence 899886422 1 12 26778999999999873
No 345
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.09 E-value=0.014 Score=51.42 Aligned_cols=94 Identities=13% Similarity=0.199 Sum_probs=66.6
Q ss_pred CCCCCCEEEEECCcc-cHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------CCCC
Q 048309 66 RVSKEHEVLEIGCGW-GTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------KAKK 136 (288)
Q Consensus 66 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------~~~~ 136 (288)
.++++.+||-+|+|. |..+.++++. .+.+|+++|.+++..+.+++ .|.. .++..+- +.. ....
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~-~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD---AAVKSGA-GAADAIRELTGGQG 239 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS---EEEECST-THHHHHHHHHGGGC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCC-cHHHHHHHHhCCCC
Confidence 577899999999986 8899999987 47899999999998887765 3432 2222211 111 2247
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+|+-.-.- ...++.+.+.|+++|++++..
T Consensus 240 ~d~v~d~~G~--------~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVGA--------QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSCC--------HHHHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCCC--------HHHHHHHHHHHhcCCEEEEEC
Confidence 9998864221 235677789999999998753
No 346
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.04 E-value=0.036 Score=48.67 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=68.9
Q ss_pred HHHHHHcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-----
Q 048309 59 SLLIEKARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----- 131 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----- 131 (288)
..........++.+||-.|+|. |..+..+++..++ .++++|.+++..+.+++. |. ..++..+-.+.
T Consensus 150 ~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga---~~~i~~~~~~~~~~~~ 222 (346)
T 4a2c_A 150 LHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GA---MQTFNSSEMSAPQMQS 222 (346)
T ss_dssp HHHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TC---SEEEETTTSCHHHHHH
T ss_pred HHHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CC---eEEEeCCCCCHHHHHH
Confidence 4456677888999999999886 7778888887554 578999999988777653 43 23332222111
Q ss_pred --CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 132 --PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 132 --~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.....+|+|+.... -...++.+.+.|++||.+++...
T Consensus 223 ~~~~~~g~d~v~d~~G--------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 223 VLRELRFNQLILETAG--------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp HHGGGCSSEEEEECSC--------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred hhcccCCccccccccc--------ccchhhhhhheecCCeEEEEEec
Confidence 12356788775422 13456667789999999987543
No 347
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.04 E-value=0.02 Score=50.38 Aligned_cols=72 Identities=14% Similarity=0.055 Sum_probs=55.3
Q ss_pred CCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEccchh
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCEMME 147 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~~l~ 147 (288)
+.+++|+.||.|.++..+.+.....+.++|+++.+++..+.++... . .+|+.++. .-..+|+|+....+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gpPCQ 82 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGFPCQ 82 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEECCCT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECCCCC
Confidence 4689999999999999988763335788999999998888886421 1 68888765 224699999987665
Q ss_pred hh
Q 048309 148 AV 149 (288)
Q Consensus 148 ~~ 149 (288)
.+
T Consensus 83 ~f 84 (327)
T 2c7p_A 83 AF 84 (327)
T ss_dssp TT
T ss_pred Cc
Confidence 55
No 348
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.03 E-value=0.028 Score=49.74 Aligned_cols=99 Identities=25% Similarity=0.250 Sum_probs=67.7
Q ss_pred HHHHcCCCCCCEEEEEC-Cc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC------
Q 048309 61 LIEKARVSKEHEVLEIG-CG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------ 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------ 132 (288)
+.+...++++.+||-+| +| .|..+..+++..+++|+++|.+++..+.+++. |.. .++..+-.++.
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~~~~~~~~~~~~~~~~~ 231 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL----GAK---RGINYRSEDFAAVIKAE 231 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEeCCchHHHHHHHHH
Confidence 33556788999999994 34 58888988888788999999999988877653 321 22222211111
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+.+|+++....-. .+..+.+.|+++|++++..
T Consensus 232 ~~~g~Dvvid~~g~~---------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 232 TGQGVDIILDMIGAA---------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp HSSCEEEEEESCCGG---------GHHHHHHTEEEEEEEEECC
T ss_pred hCCCceEEEECCCHH---------HHHHHHHHhccCCEEEEEE
Confidence 135799998754321 3556678999999988743
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.98 E-value=0.024 Score=49.71 Aligned_cols=97 Identities=20% Similarity=0.205 Sum_probs=66.4
Q ss_pred HHcCCCCCCEEEEEC-C-cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------C
Q 048309 63 EKARVSKEHEVLEIG-C-GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------K 133 (288)
Q Consensus 63 ~~~~~~~~~~vLDiG-c-G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------~ 133 (288)
+...++++.+||-+| + |.|..+..+++..+++|++++.+++.++.+++ .|. -.++..+-.++. .
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga---~~~~~~~~~~~~~~~~~~~~ 214 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----YGA---EYLINASKEDILRQVLKFTN 214 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC---SEEEETTTSCHHHHHHHHTT
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC---cEEEeCCCchHHHHHHHHhC
Confidence 334678999999999 3 45888888888778899999999988877654 342 123322222211 2
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+|+|+....- ..++.+.+.|+++|++++..
T Consensus 215 ~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 215 GKGVDASFDSVGK---------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp TSCEEEEEECCGG---------GGHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Confidence 3579999875331 24556678999999998743
No 350
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.98 E-value=0.014 Score=51.45 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC---CCC---
Q 048309 61 LIEKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR---QLP--- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~---~~~--- 132 (288)
.+...+++++.+||-+|+ |.|..+..+++..+++|+++|.+++..+.+++ .|.. .++ |.. ++.
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~g~~---~~~--d~~~~~~~~~~~ 231 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----IGGE---VFI--DFTKEKDIVGAV 231 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----TTCC---EEE--ETTTCSCHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----cCCc---eEE--ecCccHhHHHHH
Confidence 345557789999999998 46888888887767899999998887766554 3431 222 332 111
Q ss_pred ---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 ---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+.+|+++..... ...++.+.+.|+++|++++..
T Consensus 232 ~~~~~~~~D~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 232 LKATDGGAHGVINVSVS--------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHHHTSCEEEEEECSSC--------HHHHHHHTTSEEEEEEEEECC
T ss_pred HHHhCCCCCEEEECCCc--------HHHHHHHHHHHhcCCEEEEEe
Confidence 11279999875331 245677889999999988743
No 351
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.95 E-value=0.032 Score=49.52 Aligned_cols=100 Identities=21% Similarity=0.247 Sum_probs=68.2
Q ss_pred HHHHHcCCCCCCEEEEEC--CcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----
Q 048309 60 LLIEKARVSKEHEVLEIG--CGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----- 132 (288)
Q Consensus 60 ~l~~~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----- 132 (288)
.+.+...++++.+||-+| +|.|..+..+++..+++|++++.+++..+.+++ .|.. .++..+-.++.
T Consensus 154 al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 154 SLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHH
Confidence 334455788999999999 346999999988778899999999888777764 3431 22222211111
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+|+....- ..++.+.+.|+++|++++..
T Consensus 227 ~~~~g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 227 EYPEGVDVVYESVGG---------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp HCTTCEEEEEECSCT---------HHHHHHHHHEEEEEEEEECC
T ss_pred hcCCCCCEEEECCCH---------HHHHHHHHHHhcCCEEEEEe
Confidence 22469999865331 35667778999999988743
No 352
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.045 Score=48.37 Aligned_cols=97 Identities=23% Similarity=0.184 Sum_probs=65.3
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC----C---C
Q 048309 63 EKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----P---K 133 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~---~ 133 (288)
+..+++++.+||-.|+ |.|..+..+++..+++|++++.+++..+.+++ .|.. .++..+-.+. . .
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~~~~ 236 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKKYVG 236 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHHHHC
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHHHcC
Confidence 4567889999999996 45888888887778899999999988776543 3431 2222111111 0 2
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+|+++.+..- ..+..+.+.|+++|++++..
T Consensus 237 ~~~~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 237 EKGIDIIIEMLAN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TTCEEEEEESCHH---------HHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEEECCCh---------HHHHHHHHhccCCCEEEEEe
Confidence 2479999875321 23566778999999988743
No 353
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.84 E-value=0.032 Score=48.99 Aligned_cols=99 Identities=14% Similarity=0.192 Sum_probs=67.9
Q ss_pred HHHHHHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC---CCC-
Q 048309 59 SLLIEKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR---QLP- 132 (288)
Q Consensus 59 ~~l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~---~~~- 132 (288)
..+.+..+++++.+||-+|+ |.|..+..+++..+++|++++.+++..+.+++. .|.. .++ |.. ++.
T Consensus 145 ~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~~~~~ 216 (345)
T 2j3h_A 145 AGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTK---FGFD---DAF--NYKEESDLTA 216 (345)
T ss_dssp HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---SCCS---EEE--ETTSCSCSHH
T ss_pred HHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCCHHHHHH
Confidence 33335567889999999997 468888888887788999999999877766532 2431 222 222 111
Q ss_pred -----CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 -----KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -----~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+.+|+++....- ..++.+.+.|++||++++.
T Consensus 217 ~~~~~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 217 ALKRCFPNGIDIYFENVGG---------KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp HHHHHCTTCEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhCCCCcEEEECCCH---------HHHHHHHHHHhcCCEEEEE
Confidence 12469999875321 2567778999999999874
No 354
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.83 E-value=0.034 Score=48.50 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=64.9
Q ss_pred HcCCCCCCEEEEEC--CcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---------
Q 048309 64 KARVSKEHEVLEIG--CGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--------- 132 (288)
Q Consensus 64 ~~~~~~~~~vLDiG--cG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--------- 132 (288)
..+++++.+||-.| +|.|..+..+++..+++|+++|.+++..+.+++. |.. .++ |..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~----g~~---~~~--~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA----GAW---QVI--NYREEDLVERLKEIT 205 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHHT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCccHHHHHHHHh
Confidence 55778899999999 4568888888877678999999999888777652 321 222 222111
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+++.+.. ...++.+.+.|+++|++++..
T Consensus 206 ~~~~~D~vi~~~g---------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 206 GGKKVRVVYDSVG---------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp TTCCEEEEEECSC---------GGGHHHHHHTEEEEEEEEECC
T ss_pred CCCCceEEEECCc---------hHHHHHHHHHhcCCCEEEEEe
Confidence 1346999987643 123566678999999988743
No 355
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.82 E-value=0.02 Score=50.42 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=68.1
Q ss_pred HHHHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC------
Q 048309 61 LIEKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------ 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------ 132 (288)
+.+...++++.+||-+|+ |.|..+..+++..+++|++++.+++..+.+++. |. -.++..+ .++.
T Consensus 151 l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----ga---~~v~~~~-~~~~~~v~~~ 222 (342)
T 4eye_A 151 YARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV----GA---DIVLPLE-EGWAKAVREA 222 (342)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH----TC---SEEEESS-TTHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CC---cEEecCc-hhHHHHHHHH
Confidence 335567889999999997 458999999888788999999999888777653 33 1233333 2221
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+|+....- ..+..+.+.|+++|++++..
T Consensus 223 ~~~~g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 223 TGGAGVDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp TTTSCEEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred hCCCCceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 23479999875332 13566778999999998743
No 356
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.73 E-value=0.015 Score=51.01 Aligned_cols=59 Identities=12% Similarity=0.180 Sum_probs=47.8
Q ss_pred HHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC
Q 048309 57 KHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL 117 (288)
Q Consensus 57 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~ 117 (288)
.+..+++.. ..++..|||.-||+|+.+....+ .+.+.+|+|+++..++.++++++..+.
T Consensus 241 l~~~~i~~~-~~~~~~VlDpF~GsGtt~~aa~~-~gr~~ig~e~~~~~~~~~~~r~~~~~~ 299 (323)
T 1boo_A 241 LPEFFIRML-TEPDDLVVDIFGGSNTTGLVAER-ESRKWISFEMKPEYVAASAFRFLDNNI 299 (323)
T ss_dssp HHHHHHHHH-CCTTCEEEETTCTTCHHHHHHHH-TTCEEEEEESCHHHHHHHHGGGSCSCS
T ss_pred HHHHHHHHh-CCCCCEEEECCCCCCHHHHHHHH-cCCCEEEEeCCHHHHHHHHHHHHhccc
Confidence 445555544 35788999999999999888776 488999999999999999998876553
No 357
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.66 E-value=0.061 Score=40.73 Aligned_cols=90 Identities=13% Similarity=0.049 Sum_probs=57.7
Q ss_pred CEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEEcc
Q 048309 71 HEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIISCE 144 (288)
Q Consensus 71 ~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~~~ 144 (288)
.+|+=+|||. |..........+.+|+++|.+++.++.+++ . .+.++.+|..+.. .-..+|++++..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 5788899985 554333333357899999999998876653 2 3578999987643 235789888753
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.-. .....+....+.+.|+..++.
T Consensus 80 ~~~-----~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 80 PNG-----YEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp SCH-----HHHHHHHHHHHHHCSSSEEEE
T ss_pred CCh-----HHHHHHHHHHHHHCCCCeEEE
Confidence 221 112223334456678877665
No 358
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.66 E-value=0.019 Score=50.23 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHccCCEEEEEcCCH---HHHHHHHHHHHHcC
Q 048309 56 RKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSA---EQMKYAEMKVNEAG 116 (288)
Q Consensus 56 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~---~~~~~a~~~~~~~g 116 (288)
..+..++.... .++..|||.-||+|+.+....+. +.+.+|+|+++ ..++.++++++..+
T Consensus 230 ~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~-~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 230 AVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQE-GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHH-TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHc-CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34556666553 57889999999999998887774 88999999999 99999999987654
No 359
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.63 E-value=0.03 Score=49.29 Aligned_cols=92 Identities=18% Similarity=0.273 Sum_probs=64.7
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---------C
Q 048309 65 ARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---------K 133 (288)
Q Consensus 65 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---------~ 133 (288)
.+++++.+||-+|+ |.|..+..+++..+++|+++|.+++.++.+++. |.. .++ |..+.. .
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----ga~---~~~--d~~~~~~~~~~~~~~~ 232 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKAL----GAD---ETV--NYTHPDWPKEVRRLTG 232 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTSTTHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc----CCC---EEE--cCCcccHHHHHHHHhC
Confidence 46788999999998 568888888887788999999999888877642 321 222 222111 1
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
...+|+|+.... . ..++.+.+.|+++|+++..
T Consensus 233 ~~~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 233 GKGADKVVDHTG-A--------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp TTCEEEEEESSC-S--------SSHHHHHHHEEEEEEEEES
T ss_pred CCCceEEEECCC-H--------HHHHHHHHhhccCCEEEEE
Confidence 247999987643 1 2355667889999998874
No 360
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=95.62 E-value=0.15 Score=44.89 Aligned_cols=109 Identities=8% Similarity=0.080 Sum_probs=75.3
Q ss_pred CCCEEEEECCcccHHHHHHHHc--cCCEEEEEcCCHHHHHHHHHHHHHcC----------------------CCCceEEE
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ--TGCNYTGITLSAEQMKYAEMKVNEAG----------------------LQDHIRLY 124 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~--~~~~v~giD~s~~~~~~a~~~~~~~g----------------------~~~~v~~~ 124 (288)
+...|+-+|||.=.....+... .+..++=||. |+.++.=++.+...+ -+.+.+.+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4568999999987777777653 3567888886 666655444444311 13578899
Q ss_pred EcccCCCC-----------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 125 LCDYRQLP-----------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 125 ~~d~~~~~-----------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
..|+.+.. .....=++++-+++.+++++...++++.+.+...+ |.+++-+...+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~-~~~i~yE~i~p 233 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER-AMFINYEQVNM 233 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS-EEEEEEEECCT
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC-ceEEEEeccCC
Confidence 99997631 12344578888999999999999999999887755 45444444433
No 361
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.54 E-value=0.018 Score=49.97 Aligned_cols=135 Identities=15% Similarity=0.196 Sum_probs=73.4
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHH--HHHHcCCCCCCEEEEECCcccHHHHHHHH-----ccCC--EEEEEcCCH------
Q 048309 38 ISYHYDLDEDEDLKVAQMRKHSL--LIEKARVSKEHEVLEIGCGWGTFAIEVVR-----QTGC--NYTGITLSA------ 102 (288)
Q Consensus 38 ~a~~Yd~~~~~~l~~a~~~~~~~--l~~~~~~~~~~~vLDiGcG~G~~~~~la~-----~~~~--~v~giD~s~------ 102 (288)
+..+|-...+..+.+++...+.. +.++....+.-+|||+|-|+|.+...... .+.. +++.+|..+
T Consensus 63 f~e~YhS~~~GAl~Es~hVFi~~~~L~~r~~~~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~ 142 (308)
T 3vyw_A 63 YGEPYHSQTAGAIRESLYKFVRPSRILEKAKERKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPI 142 (308)
T ss_dssp TTEESSCTTTCHHHHHHHHTHHHHTHHHHHHHCSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCC
T ss_pred cCCccCCCCCcHHHHHHHHHhccCCchHHhcCCCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHh
Confidence 34444432122366666665532 33443333456899999999997543321 1333 456666321
Q ss_pred --H-HHHHHHHHHHHc----CCCCceEEEEcccCCC-C--CCCCCCEEEEccchhhhCHhh-HHHHHHHHhcccccCcEE
Q 048309 103 --E-QMKYAEMKVNEA----GLQDHIRLYLCDYRQL-P--KAKKYDRIISCEMMEAVGHEY-MEEYFGCCESLLAKDGLL 171 (288)
Q Consensus 103 --~-~~~~a~~~~~~~----g~~~~v~~~~~d~~~~-~--~~~~fD~I~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l 171 (288)
+ ..+..+...... +-.-.+++..+|+.+. + ....+|+|+..+.-..-.++- -.++++++.++++|||++
T Consensus 143 ~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~l 222 (308)
T 3vyw_A 143 LPEPYREIHEFLLERVPEYEGERLSLKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYW 222 (308)
T ss_dssp CCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEE
T ss_pred chHhHHHHHHHHHHhCccccCCcEEEEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEE
Confidence 1 112222222221 1001346788888663 3 335799999875221111111 267999999999999987
Q ss_pred E
Q 048309 172 V 172 (288)
Q Consensus 172 ~ 172 (288)
.
T Consensus 223 a 223 (308)
T 3vyw_A 223 V 223 (308)
T ss_dssp E
T ss_pred E
Confidence 6
No 362
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.46 E-value=0.0015 Score=57.73 Aligned_cols=95 Identities=20% Similarity=0.103 Sum_probs=64.0
Q ss_pred HcCCCCCCEEEEECCcc-cHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC------CCC
Q 048309 64 KARVSKEHEVLEIGCGW-GTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------KAK 135 (288)
Q Consensus 64 ~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------~~~ 135 (288)
..++ ++.+||-+|+|. |..+..+++..++ +|+++|.+++.++.+++. . + .++..+-.++. ...
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhcCC
Confidence 5677 899999999865 8888888887777 899999999877766543 1 1 12211111111 134
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.+|+|+-.-.- ...++.+.+.|+++|+++...
T Consensus 231 g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLEFSGN--------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 69999865321 234566778999999988743
No 363
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.43 E-value=0.016 Score=51.45 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=64.1
Q ss_pred HHcCCCCC------CEEEEECCcc-cHHH-HHHH-HccCCE-EEEEcCCHH---HHHHHHHHHHHcCCCCceEEEEcccC
Q 048309 63 EKARVSKE------HEVLEIGCGW-GTFA-IEVV-RQTGCN-YTGITLSAE---QMKYAEMKVNEAGLQDHIRLYLCDYR 129 (288)
Q Consensus 63 ~~~~~~~~------~~vLDiGcG~-G~~~-~~la-~~~~~~-v~giD~s~~---~~~~a~~~~~~~g~~~~v~~~~~d~~ 129 (288)
...+++++ .+||-+|+|. |..+ ..++ +..+++ |+++|.+++ ..+.+++ .|. +.+ |..
T Consensus 160 ~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa----~~v--~~~ 229 (357)
T 2b5w_A 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA----TYV--DSR 229 (357)
T ss_dssp HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC----EEE--ETT
T ss_pred HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC----ccc--CCC
Confidence 44556678 9999999875 8888 9999 766776 999999887 7776653 342 222 332
Q ss_pred CCC------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 130 QLP------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 130 ~~~------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.. ..+.+|+|+-.-.- ...++.+.+.|+++|+++...
T Consensus 230 ~~~~~~i~~~~gg~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 230 QTPVEDVPDVYEQMDFIYEATGF--------PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp TSCGGGHHHHSCCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred ccCHHHHHHhCCCCCEEEECCCC--------hHHHHHHHHHHhcCCEEEEEe
Confidence 211 01378998854221 234667778999999988743
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.42 E-value=0.078 Score=46.83 Aligned_cols=97 Identities=25% Similarity=0.196 Sum_probs=64.9
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------CC
Q 048309 63 EKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-------PK 133 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-------~~ 133 (288)
+..+++++.+||-.|+ |.|..+..+++..+++|+++|.+++.++.+++. |.. .++..+-.+. ..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~~~~~~~~~ 228 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL----GAA---AGFNYKKEDFSEATLKFTK 228 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc----CCc---EEEecCChHHHHHHHHHhc
Confidence 4567788999999983 468888888877788999999999888777433 321 2222111111 12
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...+|+++.+..-. .+..+.+.|+++|++++..
T Consensus 229 ~~~~d~vi~~~G~~---------~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 229 GAGVNLILDCIGGS---------YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp TSCEEEEEESSCGG---------GHHHHHHHEEEEEEEEECC
T ss_pred CCCceEEEECCCch---------HHHHHHHhccCCCEEEEEe
Confidence 24699998754321 2455668899999988743
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.40 E-value=0.069 Score=46.63 Aligned_cols=95 Identities=17% Similarity=0.166 Sum_probs=65.6
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--------
Q 048309 63 EKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------- 132 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------- 132 (288)
+..+++++.+||-.|+ |.|..+..+++..+++|+++|.+++..+.+++. |.. .++ |..+..
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~----g~~---~~~--d~~~~~~~~~i~~~ 209 (333)
T 1wly_A 139 QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL----GCH---HTI--NYSTQDFAEVVREI 209 (333)
T ss_dssp TTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCS---EEE--ETTTSCHHHHHHHH
T ss_pred HhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCC---EEE--ECCCHHHHHHHHHH
Confidence 3457788999999994 568888888877788999999999887777542 321 222 222211
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+++.+..- ..++.+.+.|+++|+++...
T Consensus 210 ~~~~~~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 210 TGGKGVDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp HTTCCEEEEEECSCT---------TTHHHHHHTEEEEEEEEECC
T ss_pred hCCCCCeEEEECCcH---------HHHHHHHHhhccCCEEEEEe
Confidence 13469999865431 34566778999999988743
No 366
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.40 E-value=0.06 Score=46.78 Aligned_cols=97 Identities=16% Similarity=0.270 Sum_probs=64.9
Q ss_pred HHcCCCCCC-EEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEE-cccCCCC--CCCC
Q 048309 63 EKARVSKEH-EVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYL-CDYRQLP--KAKK 136 (288)
Q Consensus 63 ~~~~~~~~~-~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~-~d~~~~~--~~~~ 136 (288)
.....+++. +||-+|+ | .|..+.++++..+++|++++.+++..+.+++. |.. .++. .+..... ..+.
T Consensus 139 ~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~~~~~~~~~~~ 211 (324)
T 3nx4_A 139 EDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSL----GAN---RILSRDEFAESRPLEKQL 211 (324)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH----TCS---EEEEGGGSSCCCSSCCCC
T ss_pred hhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc----CCC---EEEecCCHHHHHhhcCCC
Confidence 444455532 4999997 4 59999999988788999999999888888653 431 2222 1211111 3357
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+++-. .+. ..++.+.+.|+++|+++...
T Consensus 212 ~d~v~d~-----~g~----~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 212 WAGAIDT-----VGD----KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EEEEEES-----SCH----HHHHHHHHTEEEEEEEEECC
T ss_pred ccEEEEC-----CCc----HHHHHHHHHHhcCCEEEEEe
Confidence 8988753 221 26777889999999998753
No 367
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.37 E-value=0.084 Score=48.38 Aligned_cols=94 Identities=18% Similarity=0.242 Sum_probs=65.7
Q ss_pred cCCCCCCEEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-----------
Q 048309 65 ARVSKEHEVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL----------- 131 (288)
Q Consensus 65 ~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----------- 131 (288)
..+++|.+||-+|+ | .|..+..+++..++++++++.+++.++.+++. |.. .++...-.++
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~vi~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM----GAE---AIIDRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----TCC---EEEETTTTTCCSEEETTEECH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh----CCc---EEEecCcCcccccccccccch
Confidence 56789999999997 5 58999999988888999999999888877653 431 2222111111
Q ss_pred -------------CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 132 -------------PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 132 -------------~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.....+|+|+-.-. ...+..+.+.|++||++++.
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~~G---------~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEHPG---------RETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEECSC---------HHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCC---------chhHHHHHHHhhCCcEEEEE
Confidence 12357999886422 13566677899999999874
No 368
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.23 E-value=0.085 Score=46.37 Aligned_cols=94 Identities=18% Similarity=0.218 Sum_probs=65.5
Q ss_pred HHHcCCCCCCEEEEEC-Cc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------
Q 048309 62 IEKARVSKEHEVLEIG-CG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------- 132 (288)
Q Consensus 62 ~~~~~~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------- 132 (288)
.+...++++.+||-+| +| .|..+..+++..+++|+++ .+++.++.+++. |. ..+. +-.++.
T Consensus 143 ~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l----Ga----~~i~-~~~~~~~~~~~~~ 212 (343)
T 3gaz_A 143 VDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL----GA----TPID-ASREPEDYAAEHT 212 (343)
T ss_dssp TTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH----TS----EEEE-TTSCHHHHHHHHH
T ss_pred HHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc----CC----CEec-cCCCHHHHHHHHh
Confidence 3566788999999999 34 5899999988878899999 888887776543 43 2222 222211
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
....+|+|+-.-. ...+..+.+.|+++|++++.
T Consensus 213 ~~~g~D~vid~~g---------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 213 AGQGFDLVYDTLG---------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp TTSCEEEEEESSC---------THHHHHHHHHEEEEEEEEES
T ss_pred cCCCceEEEECCC---------cHHHHHHHHHHhcCCeEEEE
Confidence 2357999886432 13466677899999998873
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.03 E-value=0.11 Score=45.83 Aligned_cols=100 Identities=15% Similarity=0.175 Sum_probs=67.6
Q ss_pred HHHHHHHcCCCCC--CEEEEECC--cccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC
Q 048309 58 HSLLIEKARVSKE--HEVLEIGC--GWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP 132 (288)
Q Consensus 58 ~~~l~~~~~~~~~--~~vLDiGc--G~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 132 (288)
+..+.+..+++++ .+||-.|+ |.|..+..+++..++ +|+++|.+++..+.+++. .|.. .++ |..+..
T Consensus 147 ~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~---~~~--d~~~~~ 218 (357)
T 2zb4_A 147 LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD---AAI--NYKKDN 218 (357)
T ss_dssp HHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS---EEE--ETTTSC
T ss_pred HHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc---eEE--ecCchH
Confidence 3344466778889 99999997 458888888877777 999999998777666532 2431 222 222211
Q ss_pred --------CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 --------KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 --------~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..+.+|+++.+.. ...++.+.+.|+++|++++.
T Consensus 219 ~~~~~~~~~~~~~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 219 VAEQLRESCPAGVDVYFDNVG---------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp HHHHHHHHCTTCEEEEEESCC---------HHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHhcCCCCCEEEECCC---------HHHHHHHHHHhccCcEEEEE
Confidence 1236899887543 14567778999999999874
No 370
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.86 E-value=0.1 Score=46.40 Aligned_cols=92 Identities=20% Similarity=0.181 Sum_probs=59.9
Q ss_pred CCCCCEEEEEC-Cc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCCEE
Q 048309 67 VSKEHEVLEIG-CG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYDRI 140 (288)
Q Consensus 67 ~~~~~~vLDiG-cG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD~I 140 (288)
++++.+||-+| +| .|..+..+++..+++|++++ +++..+.++ +.|.. .++..+-.++. ....+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhhcCCCCEE
Confidence 77899999999 45 58999999888788999998 666555553 34431 22222111111 22579999
Q ss_pred EEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 141 ISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 141 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
+-.-.-. ...+....+.|++||+++.
T Consensus 253 id~~g~~-------~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 253 LDNVGGS-------TETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp EESSCTT-------HHHHGGGGBCSSSCCEEEE
T ss_pred EECCCCh-------hhhhHHHHHhhcCCcEEEE
Confidence 8653211 1234566789999999887
No 371
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.83 E-value=0.013 Score=52.02 Aligned_cols=100 Identities=20% Similarity=0.221 Sum_probs=64.4
Q ss_pred HHHHcCCC-CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-ccCCCC-CCCC
Q 048309 61 LIEKARVS-KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DYRQLP-KAKK 136 (288)
Q Consensus 61 l~~~~~~~-~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~-~~~~ 136 (288)
.+...... ++.+||-+|+|. |..+..+++..+++|+++|.+++..+.+++ +.|.. .++.. +...+. ..+.
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---~vi~~~~~~~~~~~~~g 244 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGAD---DYVIGSDQAKMSELADS 244 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCS---CEEETTCHHHHHHSTTT
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCc---eeeccccHHHHHHhcCC
Confidence 34556777 899999999875 888888888777899999998877666542 23431 12211 111111 2246
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|+|+-.-.-. ..++.+.+.|+++|+++..
T Consensus 245 ~D~vid~~g~~--------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 245 LDYVIDTVPVH--------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp EEEEEECCCSC--------CCSHHHHTTEEEEEEEEEC
T ss_pred CCEEEECCCCh--------HHHHHHHHHhccCCEEEEe
Confidence 99988643211 1234455899999998874
No 372
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.82 E-value=0.05 Score=48.27 Aligned_cols=93 Identities=23% Similarity=0.230 Sum_probs=63.4
Q ss_pred HcCCC--C-------CCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCH---HHHHHHHHHHHHcCCCCceEEEEcccC-
Q 048309 64 KARVS--K-------EHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSA---EQMKYAEMKVNEAGLQDHIRLYLCDYR- 129 (288)
Q Consensus 64 ~~~~~--~-------~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~---~~~~~a~~~~~~~g~~~~v~~~~~d~~- 129 (288)
..+++ + +.+||-+|+|. |..+..+++..+++|+++|.++ +..+.+++. |. +.+ | .
T Consensus 166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~----ga----~~v--~-~~ 234 (366)
T 2cdc_A 166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET----KT----NYY--N-SS 234 (366)
T ss_dssp GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH----TC----EEE--E-CT
T ss_pred ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh----CC----cee--c-hH
Confidence 55666 7 99999999864 7778888877678999999987 666666542 32 222 2 2
Q ss_pred CCC-----CCCCCCEEEEccchhhhCHhhHHHHH-HHHhcccccCcEEEEEe
Q 048309 130 QLP-----KAKKYDRIISCEMMEAVGHEYMEEYF-GCCESLLAKDGLLVLQF 175 (288)
Q Consensus 130 ~~~-----~~~~fD~I~~~~~l~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~ 175 (288)
++. ..+.+|+|+...... ..+ +.+.+.|+++|++++..
T Consensus 235 ~~~~~~~~~~~~~d~vid~~g~~--------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 235 NGYDKLKDSVGKFDVIIDATGAD--------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp TCSHHHHHHHCCEEEEEECCCCC--------THHHHHHGGGEEEEEEEEECS
T ss_pred HHHHHHHHhCCCCCEEEECCCCh--------HHHHHHHHHHHhcCCEEEEEe
Confidence 221 014699998753321 134 67789999999988743
No 373
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.75 E-value=0.29 Score=43.82 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=38.2
Q ss_pred HHHHcCCCCCCEEEEECCcccHHHHHHHHc--------cCCEEEEEcCCHHHHHHHHHHHH
Q 048309 61 LIEKARVSKEHEVLEIGCGWGTFAIEVVRQ--------TGCNYTGITLSAEQMKYAEMKVN 113 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGcG~G~~~~~la~~--------~~~~v~giD~s~~~~~~a~~~~~ 113 (288)
..+.++.+.+-.|+|+|.|.|.++..+.+. ...+++.||+|+...+.=++++.
T Consensus 72 ~w~~~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 72 VWKAADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp HHHHTTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred HHHHcCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 334455445568999999999998877642 13489999999988775555543
No 374
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.72 E-value=0.14 Score=44.21 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=56.8
Q ss_pred CCCCEEEEECCcccHHHHHHHHccCCE---EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCE
Q 048309 68 SKEHEVLEIGCGWGTFAIEVVRQTGCN---YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDR 139 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~~~~~la~~~~~~---v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~ 139 (288)
..+.+++|+-||.|.++.-+.+. |.+ |.++|+++.+++.-+.+.. ...++.+|+.++. ..+.+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCE
Confidence 35568999999999999888775 433 5899999998876666542 3468899999876 1247999
Q ss_pred EEEccchhhh
Q 048309 140 IISCEMMEAV 149 (288)
Q Consensus 140 I~~~~~l~~~ 149 (288)
++....+..+
T Consensus 87 l~ggpPCQ~f 96 (295)
T 2qrv_A 87 VIGGSPCNDL 96 (295)
T ss_dssp EEECCCCGGG
T ss_pred EEecCCCccc
Confidence 9998765554
No 375
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.54 E-value=0.02 Score=50.91 Aligned_cols=101 Identities=21% Similarity=0.182 Sum_probs=64.3
Q ss_pred HHHHcCCC-CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-ccCCCC-CCCC
Q 048309 61 LIEKARVS-KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DYRQLP-KAKK 136 (288)
Q Consensus 61 l~~~~~~~-~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~-~~~~ 136 (288)
.+...... ++.+||-+|+|. |..+..+++..+++|++++.+++..+.+++ ..|.. .++.. +...+. ..+.
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAAAGT 251 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHTTTC
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHhhCC
Confidence 34556777 899999999875 888888888778899999999877666542 23431 22211 111111 2247
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+|+..-.... .++.+.+.|+++|+++...
T Consensus 252 ~D~vid~~g~~~--------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 252 LDGIIDTVSAVH--------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEEEECCSSCC--------CSHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCcHH--------HHHHHHHHHhcCCEEEEEc
Confidence 999986533211 1234457889999988743
No 376
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=94.53 E-value=0.04 Score=48.12 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=64.4
Q ss_pred HHcCCCCCC-EEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-cc--CCCC--CC
Q 048309 63 EKARVSKEH-EVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DY--RQLP--KA 134 (288)
Q Consensus 63 ~~~~~~~~~-~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~--~~~~--~~ 134 (288)
...+++++. +||-+|+ | .|..+..+++..+++|++++.+++..+.+++. |.. .++.. +. .... ..
T Consensus 143 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~l----Ga~---~v~~~~~~~~~~~~~~~~ 215 (330)
T 1tt7_A 143 EQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL----GAS---EVISREDVYDGTLKALSK 215 (330)
T ss_dssp HHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH----TCS---EEEEHHHHCSSCCCSSCC
T ss_pred HhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CCc---EEEECCCchHHHHHHhhc
Confidence 345677775 8999997 4 58889999887778999999988777777542 431 22221 11 1111 23
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.+|+|+-.-. . ..+..+.+.|+++|++++..
T Consensus 216 ~~~d~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 216 QQWQGAVDPVG-------G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp CCEEEEEESCC-------T--HHHHHHHTTEEEEEEEEECC
T ss_pred CCccEEEECCc-------H--HHHHHHHHhhcCCCEEEEEe
Confidence 46898886432 1 24667779999999998743
No 377
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.41 E-value=0.28 Score=38.60 Aligned_cols=92 Identities=16% Similarity=0.070 Sum_probs=55.5
Q ss_pred CCEEEEECCcc-cHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----C--CCCCCEEE
Q 048309 70 EHEVLEIGCGW-GTFAIEVVRQT-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----K--AKKYDRII 141 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~~~~la~~~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~--~~~fD~I~ 141 (288)
+.+|+=+|||. |......+... +.+|+++|.+++.++.+++ .| +.++.+|..+.. . ...+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 56899899875 55444433335 7899999999987765542 23 456777775422 1 35789988
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..-.-. .....+-...+.+.|++.++..
T Consensus 111 ~~~~~~-----~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 111 LAMPHH-----QGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp ECCSSH-----HHHHHHHHHHHHTTCCSEEEEE
T ss_pred EeCCCh-----HHHHHHHHHHHHHCCCCEEEEE
Confidence 743211 1122222344556677777763
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.39 E-value=0.05 Score=46.85 Aligned_cols=91 Identities=19% Similarity=0.139 Sum_probs=62.1
Q ss_pred CCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc-CCCC-CCCCCCEEEE
Q 048309 67 VSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY-RQLP-KAKKYDRIIS 142 (288)
Q Consensus 67 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~-~~~~-~~~~fD~I~~ 142 (288)
++++.+||-+|+ |.|..+..+++..+++|++++.+++..+.+++ .|.. .++..+- .++. .-+.+|+|+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceEEEE
Confidence 778999999997 45888888888778899999998887776654 3431 2222111 1111 1157999886
Q ss_pred ccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 143 CEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 143 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
..- ..++.+.+.|+++|+++..
T Consensus 196 -~g~---------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 -VRG---------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp -CSC---------TTHHHHHTTEEEEEEEEEC
T ss_pred -CCH---------HHHHHHHHhhccCCEEEEE
Confidence 321 2356677999999998863
No 379
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.26 E-value=0.11 Score=45.57 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=55.3
Q ss_pred CCEEEEECCcccHHHHHHHHccC---CEE-EEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCCEEE
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQTG---CNY-TGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYDRII 141 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~~~---~~v-~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD~I~ 141 (288)
..+++|+-||.|.++.-+.+. | ..+ .++|+++.+.+.-+.++.. . ++.+|+.++. +...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~------~-~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE------E-VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC------C-CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC------C-cccCChhhcCHHHhccCCCCEEE
Confidence 458999999999999988775 4 345 6999999998888877632 1 5678988876 223799999
Q ss_pred Eccchhhh
Q 048309 142 SCEMMEAV 149 (288)
Q Consensus 142 ~~~~l~~~ 149 (288)
....+..+
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 87765554
No 380
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=94.16 E-value=0.055 Score=47.16 Aligned_cols=96 Identities=17% Similarity=0.266 Sum_probs=62.4
Q ss_pred HHcCCCCCC-EEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc-cc-CC-CC--CC
Q 048309 63 EKARVSKEH-EVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC-DY-RQ-LP--KA 134 (288)
Q Consensus 63 ~~~~~~~~~-~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~-~~-~~--~~ 134 (288)
...+++++. +||-+|+ |.|..+..+++..+++|++++.+++..+.+++ .|.. .++.. +. .+ .. ..
T Consensus 142 ~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~ 214 (328)
T 1xa0_A 142 EEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----LGAK---EVLAREDVMAERIRPLDK 214 (328)
T ss_dssp HHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----TTCS---EEEECC---------CCS
T ss_pred hhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----cCCc---EEEecCCcHHHHHHHhcC
Confidence 445677775 8999997 45899999988878899999998877777654 3431 12211 11 11 11 23
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+.+|+|+-.-.- ..+..+.+.|+++|++++.
T Consensus 215 ~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 215 QRWAAAVDPVGG---------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CCEEEEEECSTT---------TTHHHHHHTEEEEEEEEEC
T ss_pred CcccEEEECCcH---------HHHHHHHHhhccCCEEEEE
Confidence 468988864321 1355667899999998874
No 381
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=94.08 E-value=0.27 Score=44.78 Aligned_cols=98 Identities=19% Similarity=0.188 Sum_probs=65.4
Q ss_pred cCCCCCCEEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC------------
Q 048309 65 ARVSKEHEVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ------------ 130 (288)
Q Consensus 65 ~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~------------ 130 (288)
.++++|.+||-.|+ | .|..+..+++..++++++++.+++.++.+++ .|...-+.....|..+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccchh
Confidence 56789999999997 4 4888999988878899999999988877754 3432111111112110
Q ss_pred -------CC--CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 131 -------LP--KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 131 -------~~--~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+. ....+|+|+-...- ..++.+.+.|++||++++..
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G~---------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTGR---------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSCH---------HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHhCCCceEEEECCCc---------hHHHHHHHHHhcCCEEEEEe
Confidence 00 13579999875331 24566678999999998743
No 382
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=94.04 E-value=0.36 Score=42.78 Aligned_cols=91 Identities=19% Similarity=0.207 Sum_probs=60.1
Q ss_pred CCCCEEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC------CCCCCCE
Q 048309 68 SKEHEVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------KAKKYDR 139 (288)
Q Consensus 68 ~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------~~~~fD~ 139 (288)
.++.+||-+|+ | .|..+..+++..+++|+++. +++..+.+++ .|.. .++...-.++. .++.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCccE
Confidence 78899999998 3 69999999988788999885 7776665543 3431 33332222211 2345999
Q ss_pred EEEccchhhhCHhhHHHHHHHHhccc-ccCcEEEEE
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLL-AKDGLLVLQ 174 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~ 174 (288)
|+-.-.- ...++.+.+.| ++||+++..
T Consensus 235 v~d~~g~--------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCITN--------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESSCS--------HHHHHHHHHHSCTTCEEEEES
T ss_pred EEECCCc--------hHHHHHHHHHhhcCCCEEEEE
Confidence 9864221 23455566778 699998874
No 383
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.01 E-value=0.079 Score=46.62 Aligned_cols=72 Identities=17% Similarity=0.186 Sum_probs=55.1
Q ss_pred CEEEEECCcccHHHHHHHHccC---CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCCEEEEc
Q 048309 71 HEVLEIGCGWGTFAIEVVRQTG---CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYDRIISC 143 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~~~---~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD~I~~~ 143 (288)
.+++|+-||.|.+..-+.+. | ..|.++|+++.+.+.-+.++. ...++.+|+.++. +...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEec
Confidence 47999999999999888765 4 357899999998887776653 3457788998876 22379999987
Q ss_pred cchhhh
Q 048309 144 EMMEAV 149 (288)
Q Consensus 144 ~~l~~~ 149 (288)
..+..+
T Consensus 77 pPCQ~f 82 (333)
T 4h0n_A 77 PPCQPF 82 (333)
T ss_dssp CCCCCS
T ss_pred CCCcch
Confidence 765544
No 384
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.81 E-value=0.41 Score=35.79 Aligned_cols=67 Identities=15% Similarity=0.131 Sum_probs=45.5
Q ss_pred CCEEEEECCcc-cHH-HHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEE
Q 048309 70 EHEVLEIGCGW-GTF-AIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIIS 142 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~-~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~ 142 (288)
..+|+-+|||. |.. +..|.+ .+.+|+++|.+++.++.+++ . .+.++.+|..+.. ....+|+|+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~~~~~~~~~----~----~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSKEKIELLED----E----GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHH----T----TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHH----C----CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 45788999975 433 333333 47899999999987766543 2 3578889887643 2357898887
Q ss_pred ccc
Q 048309 143 CEM 145 (288)
Q Consensus 143 ~~~ 145 (288)
...
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 543
No 385
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.76 E-value=0.58 Score=41.69 Aligned_cols=98 Identities=8% Similarity=0.100 Sum_probs=69.0
Q ss_pred CCCEEEEECCcccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCC-ceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQD-HIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~-~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.+.+||.++.+.|.++..++.. .++.+.-|--.....+.+++.++++. ++++... ..+ ..+.||+|+.... .
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~~~~~~~v~~~lp-k 110 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--YPQQPGVVLIKVP-K 110 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--CCSSCSEEEEECC-S
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--cccCCCEEEEEcC-C
Confidence 4568999999999999888753 34555436666677788888888853 2554322 222 3478999887543 2
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+. ......+..+...|++|+.+++..
T Consensus 111 ~~--~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 111 TL--ALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CH--HHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CH--HHHHHHHHHHHhhCCCCCEEEEEe
Confidence 22 566778899999999999987743
No 386
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.70 E-value=0.037 Score=47.78 Aligned_cols=57 Identities=16% Similarity=0.177 Sum_probs=41.2
Q ss_pred CceEEEEcccCCC-C--CCCCCCEEEEccchhhhC--------------H----hhHHHHHHHHhcccccCcEEEEEe
Q 048309 119 DHIRLYLCDYRQL-P--KAKKYDRIISCEMMEAVG--------------H----EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 119 ~~v~~~~~d~~~~-~--~~~~fD~I~~~~~l~~~~--------------~----~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.+++++++|..+. . ++++||+|+++....... . ..+..+++++.++|+|||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3678999999873 3 467999999986653110 0 123567889999999999998854
No 387
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=93.63 E-value=0.65 Score=40.79 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=57.3
Q ss_pred HHcCCCCCCEEEEECC-c-ccHHHHHHHHccCCEEEEE-cCCHH---HHHHHHHHHHHcCCCCceEEEEc------ccCC
Q 048309 63 EKARVSKEHEVLEIGC-G-WGTFAIEVVRQTGCNYTGI-TLSAE---QMKYAEMKVNEAGLQDHIRLYLC------DYRQ 130 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gi-D~s~~---~~~~a~~~~~~~g~~~~v~~~~~------d~~~ 130 (288)
...++++|.+||-+|+ | .|..+..+++..+++++++ +.++. ..+.+ ++.|.. .++.. ++.+
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~----~~lGa~---~vi~~~~~~~~~~~~ 233 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL----KSLGAE---HVITEEELRRPEMKN 233 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH----HHTTCS---EEEEHHHHHSGGGGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH----HhcCCc---EEEecCcchHHHHHH
Confidence 3457889999999996 4 5999999998867776554 44332 23333 344532 23321 1222
Q ss_pred CCCC-CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 131 LPKA-KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 131 ~~~~-~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.... +.+|+|+-.-. .+. .....+.|+++|++++.
T Consensus 234 ~~~~~~~~Dvvid~~g-----~~~----~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 234 FFKDMPQPRLALNCVG-----GKS----STELLRQLARGGTMVTY 269 (357)
T ss_dssp TTSSSCCCSEEEESSC-----HHH----HHHHHTTSCTTCEEEEC
T ss_pred HHhCCCCceEEEECCC-----cHH----HHHHHHhhCCCCEEEEE
Confidence 2211 25999886422 111 13467999999998874
No 388
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=93.38 E-value=0.22 Score=43.33 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=54.5
Q ss_pred CEEEEECCcccHHHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEccchh
Q 048309 71 HEVLEIGCGWGTFAIEVVRQTGCN-YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCEMME 147 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~~~~~-v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~~l~ 147 (288)
.+|+|+-||.|.++.-+-+. |.+ +.++|+++.+++.-+.+. .-.++.+|+.++. .-...|+++....+.
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~-------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNH-------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHC-------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHC-------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 37999999999999888765 544 669999998877766653 2367899999886 335799999877665
Q ss_pred hh
Q 048309 148 AV 149 (288)
Q Consensus 148 ~~ 149 (288)
.+
T Consensus 73 ~f 74 (331)
T 3ubt_Y 73 SW 74 (331)
T ss_dssp GT
T ss_pred Cc
Confidence 54
No 389
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.23 E-value=0.29 Score=44.29 Aligned_cols=93 Identities=11% Similarity=0.122 Sum_probs=62.9
Q ss_pred CCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEEc
Q 048309 70 EHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIISC 143 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~~ 143 (288)
..+|+-+|+|. |..........+..|++||.+++.++.+++ .| +.++.+|..+.. .-..+|+|++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 45788899875 544433333357899999999999887753 23 578999998753 24678988875
Q ss_pred cchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 144 EMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.. .......+....+.+.|...+++..
T Consensus 76 ~~-----~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 76 ID-----DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CS-----SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CC-----ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 32 1233445555667778888777743
No 390
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.16 E-value=1.5 Score=32.16 Aligned_cols=90 Identities=12% Similarity=0.057 Sum_probs=52.2
Q ss_pred CCEEEEECCcc-cHHH-HHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEE
Q 048309 70 EHEVLEIGCGW-GTFA-IEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIIS 142 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~~-~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~ 142 (288)
+.+|+=+|+|. |... ..+.+ .+.+|+++|.+++.++..++. . .+.++.+|..+.. ....+|+|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~~~~~~~~~~---~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDKDICKKASAE---I----DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHH---C----SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHh---c----CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 45788899865 4332 33333 478999999998876544322 1 2466777765432 1357899887
Q ss_pred ccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 143 CEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 143 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.-.-. .....+..+.+.+.++ .+++
T Consensus 76 ~~~~~-----~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 76 VTGKE-----EVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp CCSCH-----HHHHHHHHHHHHTTCC-CEEE
T ss_pred eeCCc-----hHHHHHHHHHHHcCCC-EEEE
Confidence 64322 2223444445556765 4444
No 391
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.83 E-value=0.071 Score=47.40 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=59.4
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
++.+|+=+|+|. |..+..+++..|++|+++|.+++..+.+++.... .+.....+..++. .-..+|+|+..-..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~~ 240 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVLV 240 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence 347999999875 6666676666677999999999888777655422 2222222211221 11368999875443
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
... ..+.-+.+...+.++|||+++..
T Consensus 241 ~~~--~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 241 PGR--RAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp TTS--SCCCCBCHHHHTTSCTTCEEEET
T ss_pred CCC--CCCeecCHHHHhhCCCCCEEEEE
Confidence 221 00000123345788999977753
No 392
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.71 E-value=0.079 Score=47.23 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=57.5
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
++.+|+=+|+|. |..+...+...|++|+++|.+++..+.+.+.. +. .+.....+..++. .-..+|+|+..-..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~~l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEANIKKSVQHADLLIGAVLV 239 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHHHHHHHHHHCSEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHHHHHHHHhCCCEEEECCCC
Confidence 467999999874 66666666557889999999998776665432 32 2322222222222 11368999876443
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
... ....-+.+...+.+++||+++..
T Consensus 240 ~~~--~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 240 PGA--KAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp --------CCSCHHHHTTSCTTCEEEEC
T ss_pred Ccc--ccchhHHHHHHHhhcCCCEEEEE
Confidence 220 01111245566888999987753
No 393
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.68 E-value=0.18 Score=44.28 Aligned_cols=98 Identities=9% Similarity=0.070 Sum_probs=61.6
Q ss_pred HHHHcCCCCC-CEEEEE-CCc-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----
Q 048309 61 LIEKARVSKE-HEVLEI-GCG-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----- 132 (288)
Q Consensus 61 l~~~~~~~~~-~~vLDi-GcG-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----- 132 (288)
+++... .++ .+||=. |+| .|..+..+++..+++|++++.+++..+.+++. |. -.++..+-.++.
T Consensus 156 ~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~----Ga---~~~~~~~~~~~~~~v~~ 227 (349)
T 3pi7_A 156 MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDI----GA---AHVLNEKAPDFEATLRE 227 (349)
T ss_dssp HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHH----TC---SEEEETTSTTHHHHHHH
T ss_pred HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----CC---CEEEECCcHHHHHHHHH
Confidence 344444 345 567644 555 48888888888788999999999888877643 42 123322222211
Q ss_pred --CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
....+|+|+-...-. .+..+.+.|+++|++++..
T Consensus 228 ~~~~~g~D~vid~~g~~---------~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 228 VMKAEQPRIFLDAVTGP---------LASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp HHHHHCCCEEEESSCHH---------HHHHHHHHSCTTCEEEECC
T ss_pred HhcCCCCcEEEECCCCh---------hHHHHHhhhcCCCEEEEEe
Confidence 124799998753321 2355678999999998743
No 394
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.65 E-value=0.046 Score=48.93 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=58.4
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
++.+|+=+|+|. |..+...++..|.+|+++|.+++.++.+++.. |. .+.....+..++. .-..+|+|+..-..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~--~~~~~~~~~~~l~~~l~~aDvVi~~~~~ 241 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CG--RIHTRYSSAYELEGAVKRADLVIGAVLV 241 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SSEEEECCHHHHHHHHHHCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CC--eeEeccCCHHHHHHHHcCCCEEEECCCc
Confidence 578999999975 66666666667789999999998877665432 22 1222211111121 11368999874322
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
... +...-+.++..+.++|||+++..
T Consensus 242 p~~--~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 242 PGA--KAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp TTS--CCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCC--CCcceecHHHHhcCCCCcEEEEE
Confidence 210 00011234455788999987753
No 395
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.63 E-value=0.82 Score=39.62 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=57.0
Q ss_pred CCEEEEECCcc-c-HHHHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC-CCCCCCCCEEEEcc
Q 048309 70 EHEVLEIGCGW-G-TFAIEVVRQTGC--NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ-LPKAKKYDRIISCE 144 (288)
Q Consensus 70 ~~~vLDiGcG~-G-~~~~~la~~~~~--~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~-~~~~~~fD~I~~~~ 144 (288)
..+|.=||+|. | .++..+.+. +. +|+++|.+++.++.+.+ .|. +.-...|..+ . -...|+|+..-
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~----~G~---~~~~~~~~~~~~--~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD----LGI---IDEGTTSIAKVE--DFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH----TTS---CSEEESCTTGGG--GGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH----CCC---cchhcCCHHHHh--hccCCEEEEeC
Confidence 36899999986 4 445555554 66 99999999987766543 343 1112233333 2 24689998754
Q ss_pred chhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 145 MMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 145 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
.. ....++++++...+++|..++
T Consensus 103 p~-----~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PV-----RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CG-----GGHHHHHHHHHHHSCTTCEEE
T ss_pred CH-----HHHHHHHHHHhhccCCCcEEE
Confidence 33 345677888888898887554
No 396
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.36 E-value=0.11 Score=46.03 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=58.3
Q ss_pred cCCCCC-CEEEEECC-c-ccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEccc---CCCC------
Q 048309 65 ARVSKE-HEVLEIGC-G-WGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDY---RQLP------ 132 (288)
Q Consensus 65 ~~~~~~-~~vLDiGc-G-~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~---~~~~------ 132 (288)
.+++++ .+||-+|+ | .|..+.++++..+++++++..+++..+..++.+++.|.. .++..+- .++.
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEW 238 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHH
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHH
Confidence 467889 99999996 4 589999999887888888865443311111222334532 2232211 1111
Q ss_pred ---CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 ---KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ---~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
....+|+|+-.-.- .... .+.+.|+++|+++..
T Consensus 239 t~~~~~g~Dvvid~~G~--------~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 239 IKQSGGEAKLALNCVGG--------KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp HHHHTCCEEEEEESSCH--------HHHH-HHHHTSCTTCEEEEC
T ss_pred hhccCCCceEEEECCCc--------hhHH-HHHHHhccCCEEEEe
Confidence 13479999864321 1122 556899999998874
No 397
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.31 E-value=1.1 Score=34.03 Aligned_cols=92 Identities=17% Similarity=0.178 Sum_probs=55.8
Q ss_pred CCEEEEECCcccHHHHHHHHc---cCCEEEEEcCC-HHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEE
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLS-AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRI 140 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s-~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I 140 (288)
..+|+=+|+|. .+..+++. .+.+|+++|.+ ++..+...+... ..+.++.+|..+.. .-..+|+|
T Consensus 3 ~~~vlI~G~G~--vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSI--LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECCCH--HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEE
Confidence 35788888753 33333332 47899999997 454443333221 24789999987642 24678998
Q ss_pred EEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 141 ISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 141 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
++...- ......+....+.+.|...++.
T Consensus 76 i~~~~~-----d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 76 LALSDN-----DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp EECSSC-----HHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEecCC-----hHHHHHHHHHHHHHCCCCEEEE
Confidence 876322 2234455555566667777766
No 398
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.98 E-value=1.9 Score=35.98 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=48.7
Q ss_pred CEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 71 HEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 71 ~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
++||=.|+ |.++..+++. .+.+|++++-++....... . .+++++.+|+.++. ...+|+|+......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~-~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A----SGAEPLLWPGEEPS-LDGVTHLLISTAPD 74 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H----TTEEEEESSSSCCC-CTTCCEEEECCCCB
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h----CCCeEEEecccccc-cCCCCEEEECCCcc
Confidence 58999995 6666666554 5789999998876543322 2 25899999999876 57899999876544
Q ss_pred h
Q 048309 148 A 148 (288)
Q Consensus 148 ~ 148 (288)
.
T Consensus 75 ~ 75 (286)
T 3ius_A 75 S 75 (286)
T ss_dssp T
T ss_pred c
Confidence 3
No 399
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.96 E-value=1.5 Score=36.75 Aligned_cols=103 Identities=14% Similarity=0.214 Sum_probs=67.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCC------------HHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLS------------AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s------------~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.++++|=.|++.|. .+..|++ .+++|+.+|.+ ...++.+...++..+ .++.++..|+.+..
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAE-EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHH-CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHHH
Confidence 46788888876542 3444555 48899999987 666666666666554 47899999998743
Q ss_pred ----------CCCCCCEEEEccchhh----hCHhhHHH-----------HHHHHhcccccCcEEEEE
Q 048309 133 ----------KAKKYDRIISCEMMEA----VGHEYMEE-----------YFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ----------~~~~fD~I~~~~~l~~----~~~~~~~~-----------~l~~~~~~LkpgG~l~~~ 174 (288)
.-+..|+++.+..+.. .+.++... +.+.+...++.+|.++..
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 1147999998755422 22233322 345666777788887764
No 400
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.94 E-value=0.54 Score=43.50 Aligned_cols=89 Identities=13% Similarity=0.109 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccc
Q 048309 67 VSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEM 145 (288)
Q Consensus 67 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~ 145 (288)
..+|++|+-+|+|. |......++..+.+|+++|.++...+.+++ .|. ++ .++.+. -..+|+|+..-.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~--l~~aDvVi~atg 338 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM----EGF----DV--VTVEEA--IGDADIVVTATG 338 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTC----EE--CCHHHH--GGGCSEEEECSS
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH--HhCCCEEEECCC
Confidence 56789999999986 777666666678899999999987665543 343 22 222221 246899987643
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
-.++ - -.+..+.||+||+++..
T Consensus 339 t~~~--i-----~~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 339 NKDI--I-----MLEHIKAMKDHAILGNI 360 (494)
T ss_dssp SSCS--B-----CHHHHHHSCTTCEEEEC
T ss_pred CHHH--H-----HHHHHHhcCCCcEEEEe
Confidence 2222 0 12344668999988763
No 401
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.72 E-value=1.3 Score=36.85 Aligned_cols=106 Identities=9% Similarity=0.099 Sum_probs=68.7
Q ss_pred CCCEEEEECCc----ccH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------
Q 048309 69 KEHEVLEIGCG----WGT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----------- 132 (288)
Q Consensus 69 ~~~~vLDiGcG----~G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------- 132 (288)
.++++|=.|++ .|. ++..++++ +++|+.++.++...+.+.+..+..+- .++.++.+|+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA-GARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence 46789989865 333 45555654 88999999887666666665555442 26899999998754
Q ss_pred CCCCCCEEEEccchhh----------hCHhhHH-----------HHHHHHhcccccCcEEEEEee
Q 048309 133 KAKKYDRIISCEMMEA----------VGHEYME-----------EYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~----------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.-+..|+++.+..+.. .+.++.. .+.+.+...++++|.++....
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 0147899988654322 2223332 245566778888888877543
No 402
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=91.64 E-value=0.9 Score=41.22 Aligned_cols=45 Identities=22% Similarity=0.299 Sum_probs=35.9
Q ss_pred CCEEEEECCcccHHHHHHHHc------cCCEEEEEcCCHHHHHHHHHHHHH
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ------TGCNYTGITLSAEQMKYAEMKVNE 114 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~------~~~~v~giD~s~~~~~~a~~~~~~ 114 (288)
..+|+|+|.|+|.++..+.+. ...+++.||+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 469999999999998887653 134899999999988777777654
No 403
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=91.52 E-value=0.46 Score=36.71 Aligned_cols=112 Identities=16% Similarity=0.074 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCcccHHHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC
Q 048309 53 AQMRKHSLLIEKARVSKEHEVLEIGCGWGTFAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL 131 (288)
Q Consensus 53 a~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 131 (288)
+|+..+.+.++.....+| -|||+|-|+|..--++.+. ++.+|+.+|-.-.. -....|+.-.++.+|+.+.
T Consensus 25 aQR~~L~~a~~~v~~~~G-pVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~--------hp~~~P~~e~~ilGdi~~t 95 (174)
T 3iht_A 25 SQRACLEHAIAQTAGLSG-PVYELGLGNGRTYHHLRQHVQGREIYVFERAVAS--------HPDSTPPEAQLILGDIRET 95 (174)
T ss_dssp HHHHHHHHHHHHTTTCCS-CEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCC--------CGGGCCCGGGEEESCHHHH
T ss_pred HHHHHHHHHHHHhcCCCC-ceEEecCCCChhHHHHHHhCCCCcEEEEEeeecc--------CCCCCCchHheecccHHHH
Confidence 778888888888876555 7999999999999999888 88899999942210 0112234456778887663
Q ss_pred C------CCCCCCEEEEccchhhhCH--hhHHHHHHHHhcccccCcEEEE
Q 048309 132 P------KAKKYDRIISCEMMEAVGH--EYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 132 ~------~~~~fD~I~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
- ...+.-++.+....+.-.. ....-+-.-+..+|.|||.++.
T Consensus 96 L~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 96 LPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp HHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 2 1334444444333222110 0111122345688999998876
No 404
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=91.45 E-value=0.29 Score=37.44 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=53.9
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEE
Q 048309 68 SKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRII 141 (288)
Q Consensus 68 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~ 141 (288)
.++.+|+=+|||. |......+...+.+|+++|.+++.++.++. .. .+.++.+|..+.. ....+|+|+
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~----g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF----SGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC----CSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC----CCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 3567999999975 554444433357899999998865543321 11 3456667764421 124689988
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
..-.- ......+..+.+.+.+...++.
T Consensus 90 ~~~~~-----~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 90 AFTND-----DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp ECSSC-----HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEeCC-----cHHHHHHHHHHHHHCCCCeEEE
Confidence 75332 2223333344444555555555
No 405
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.38 E-value=1.6 Score=35.28 Aligned_cols=88 Identities=15% Similarity=0.002 Sum_probs=55.1
Q ss_pred EEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEEc
Q 048309 72 EVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIISC 143 (288)
Q Consensus 72 ~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~~ 143 (288)
+|+=+|+| .++..+++. .+.+|+++|.+++.++...+. . .+.++.+|..+.. .-..+|+|++.
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 46777875 444444332 578999999999877654332 2 3678999988743 24679999875
Q ss_pred cchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 144 EMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
..- ......+....+.+.+...++.
T Consensus 73 ~~~-----d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 73 TPR-----DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp CSC-----HHHHHHHHHHHHHTSCCCEEEE
T ss_pred cCC-----cHHHHHHHHHHHHHcCCCeEEE
Confidence 322 2234445555555566666665
No 406
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.37 E-value=0.13 Score=45.01 Aligned_cols=58 Identities=14% Similarity=0.271 Sum_probs=42.8
Q ss_pred CceEEEEcccCC-CC--CCCCCCEEEEccchhhhC------------HhhHHHHHHHHhcccccCcEEEEEee
Q 048309 119 DHIRLYLCDYRQ-LP--KAKKYDRIISCEMMEAVG------------HEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 119 ~~v~~~~~d~~~-~~--~~~~fD~I~~~~~l~~~~------------~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
.+..++++|..+ +. +++++|+|++........ ...+...++++.++|+|||.+++...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 357899999865 33 467999999986653210 03467889999999999999998643
No 407
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.11 E-value=0.18 Score=48.55 Aligned_cols=105 Identities=15% Similarity=0.167 Sum_probs=66.0
Q ss_pred CCCEEEEECCcccHHHHHHHHc--------c-----CCEEEEEcC---CHHHHHHHHH-----------HHHHcCC--C-
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ--------T-----GCNYTGITL---SAEQMKYAEM-----------KVNEAGL--Q- 118 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~--------~-----~~~v~giD~---s~~~~~~a~~-----------~~~~~g~--~- 118 (288)
+.-+|+|+|.|+|.+.....+. + ..+++++|. +++.++.+-. ..+.... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 4458999999999987665432 0 135899998 7777763322 2222110 0
Q ss_pred ----------CceEEEEcccCCC-C-C----CCCCCEEEEccchhhhCHhh-HHHHHHHHhcccccCcEEEE
Q 048309 119 ----------DHIRLYLCDYRQL-P-K----AKKYDRIISCEMMEAVGHEY-MEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 119 ----------~~v~~~~~d~~~~-~-~----~~~fD~I~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~ 173 (288)
-.+++..+|+.+. + . ...||+++....-....++- -.++++.+.++++|||.+..
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 1245667777552 2 1 46799999875332222111 26788999999999998764
No 408
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.97 E-value=0.36 Score=42.33 Aligned_cols=96 Identities=20% Similarity=0.196 Sum_probs=58.8
Q ss_pred HHHHcCCCCCCEEEEECC-c-ccHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----
Q 048309 61 LIEKARVSKEHEVLEIGC-G-WGTFAIEVVRQT-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----- 132 (288)
Q Consensus 61 l~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----- 132 (288)
+.+..+++++.+||=.|+ | .|..+..+++.. +..|++++ +++..+.++ .|.. .++. +-.++.
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~---~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVT---HLFD-RNADYVQEVKR 203 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSS---EEEE-TTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCc---EEEc-CCccHHHHHHH
Confidence 345567889999999998 4 488888998873 57899988 554444433 3331 2332 212211
Q ss_pred -CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 133 -KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+.+|+|+-.-.- ..+..+.+.|+++|++++..
T Consensus 204 ~~~~g~Dvv~d~~g~---------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 204 ISAEGVDIVLDCLCG---------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp HCTTCEEEEEEECC----------------CTTEEEEEEEEEEC
T ss_pred hcCCCceEEEECCCc---------hhHHHHHHHhhcCCEEEEEC
Confidence 23579999864221 11356779999999998754
No 409
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.95 E-value=3.7 Score=34.81 Aligned_cols=105 Identities=16% Similarity=0.099 Sum_probs=67.6
Q ss_pred CCCCEEEEECCc----ccH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----------
Q 048309 68 SKEHEVLEIGCG----WGT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---------- 132 (288)
Q Consensus 68 ~~~~~vLDiGcG----~G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---------- 132 (288)
..++++|-.|++ .|. .+..+++. +++|+.++.++...+.+.+..+..+ ++.++.+|+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA-GAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT-TCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 357789999965 333 44555654 8899999998766666655555443 5889999998743
Q ss_pred -CCCCCCEEEEccchh----------hhCHhhHHH-----------HHHHHhcccccCcEEEEEee
Q 048309 133 -KAKKYDRIISCEMME----------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~----------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 176 (288)
.-+..|+++.+..+. ..+.++... +.+.+...++.+|.++....
T Consensus 105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 125799999875432 122233222 34556667777888877543
No 410
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.85 E-value=0.074 Score=47.57 Aligned_cols=42 Identities=24% Similarity=0.358 Sum_probs=34.4
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEM 110 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~ 110 (288)
++.+|+=+|+|. |..+...+...|++|+++|.++...+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999996 777777777678899999999987776654
No 411
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=90.57 E-value=0.62 Score=40.98 Aligned_cols=96 Identities=14% Similarity=0.152 Sum_probs=62.6
Q ss_pred cCCCCCCEEEEECCcc-cHHHHHHHHcc-CCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccC------CCCCCCC
Q 048309 65 ARVSKEHEVLEIGCGW-GTFAIEVVRQT-GCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYR------QLPKAKK 136 (288)
Q Consensus 65 ~~~~~~~~vLDiGcG~-G~~~~~la~~~-~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~------~~~~~~~ 136 (288)
.+++++.+||-+|+|. |..+.++++.. +++|+++|.+++..+.+++ .|.. .++..+-. ++.....
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGAD---HVVDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCS---EEEETTSCHHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH----hCCC---EEEeccchHHHHHHHHhCCCC
Confidence 6788999999999875 88888888876 8999999999988877754 3431 22222111 1112237
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+|+|+-.-.-. . ...++.+.+. ++|++++..
T Consensus 255 ~Dvvid~~G~~----~--~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 255 VNVAMDFVGSQ----A--TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEEEESSCCH----H--HHHHGGGGEE--EEEEEEECC
T ss_pred CcEEEECCCCc----h--HHHHHHHhhc--CCCEEEEEe
Confidence 99998643211 0 0144555566 899988743
No 412
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.53 E-value=0.093 Score=47.32 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=34.9
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEM 110 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~ 110 (288)
++.+|+=+|+|. |..+..++...|++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 567999999996 777777777778899999999987776654
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.51 E-value=2.4 Score=35.53 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=53.6
Q ss_pred EEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhh
Q 048309 72 EVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAV 149 (288)
Q Consensus 72 ~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~ 149 (288)
+|.=||||. |. ++..+++ .+.+|+++|.+++.++.+. ..|... . ...|..+ . ...|+|+..-.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~~~~~~~~----~~g~~~--~-~~~~~~~--~-~~~D~vi~av~---- 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQSTCEKAV----ERQLVD--E-AGQDLSL--L-QTAKIIFLCTP---- 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGG--G-TTCSEEEECSC----
T ss_pred EEEEEcCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHH----hCCCCc--c-ccCCHHH--h-CCCCEEEEECC----
Confidence 577799885 44 3444444 4679999999998776553 234321 1 1233332 2 57899987543
Q ss_pred CHhhHHHHHHHHhcccccCcEEE
Q 048309 150 GHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 150 ~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
+.....+++++...++++..++
T Consensus 67 -~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 -IQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -HHHHHHHHHHHGGGSCTTCEEE
T ss_pred -HHHHHHHHHHHHhhCCCCCEEE
Confidence 2345677888888888877554
No 414
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.85 E-value=0.18 Score=48.79 Aligned_cols=105 Identities=15% Similarity=0.149 Sum_probs=65.5
Q ss_pred CCCEEEEECCcccHHHHHHHHc--------c-----CCEEEEEcC---CHHHHHHHH-----------HHHHHcC-----
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ--------T-----GCNYTGITL---SAEQMKYAE-----------MKVNEAG----- 116 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~--------~-----~~~v~giD~---s~~~~~~a~-----------~~~~~~g----- 116 (288)
+.-+|+|+|.|+|.+...+.+. + ..+++.+|. +.+.+..+- +..+...
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4568999999999987766442 0 146999998 555554432 2222211
Q ss_pred -----CC---CceEEEEcccCCCC--C----CCCCCEEEEccchhhhCHhh-HHHHHHHHhcccccCcEEEE
Q 048309 117 -----LQ---DHIRLYLCDYRQLP--K----AKKYDRIISCEMMEAVGHEY-MEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 117 -----~~---~~v~~~~~d~~~~~--~----~~~fD~I~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~ 173 (288)
+. -.+++..+|+.+.- . ...+|+++..+.-..-.++. -..++..+.++++|||.+..
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 01 14677888886532 1 47899999865322211111 26788999999999998764
No 415
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.78 E-value=0.15 Score=45.70 Aligned_cols=42 Identities=24% Similarity=0.281 Sum_probs=33.5
Q ss_pred CCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHH
Q 048309 69 KEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEM 110 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~ 110 (288)
++.+|+=+|+|. |..+..+++..|++|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 578999999996 777777777777899999999876665543
No 416
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.35 E-value=2.8 Score=35.21 Aligned_cols=87 Identities=20% Similarity=0.274 Sum_probs=53.0
Q ss_pred EEEEECCcc-cHH-HHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCC-CCCEEEEccch
Q 048309 72 EVLEIGCGW-GTF-AIEVVRQTGC--NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAK-KYDRIISCEMM 146 (288)
Q Consensus 72 ~vLDiGcG~-G~~-~~~la~~~~~--~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~fD~I~~~~~l 146 (288)
+|.=||+|. |.. +..+++ .+. +|+++|.+++.++.++ ..|... . ...|..+. -. ..|+|+..-..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~-~~~~~~~~--~~~~aDvVilavp~ 72 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINPESISKAV----DLGIID--E-GTTSIAKV--EDFSPDFVMLSSPV 72 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG--GGTCCSEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCHHHHHHHH----HCCCcc--c-ccCCHHHH--hcCCCCEEEEcCCH
Confidence 677899886 443 344444 355 8999999998776554 334311 1 12233221 24 78999875433
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.....++.++...++++..++.
T Consensus 73 -----~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 73 -----RTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp -----HHHHHHHHHHHHHSCTTCEEEE
T ss_pred -----HHHHHHHHHHHhhCCCCcEEEE
Confidence 3445677778788888875554
No 417
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.18 E-value=4.6 Score=34.11 Aligned_cols=103 Identities=18% Similarity=0.188 Sum_probs=65.0
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHH-HHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAE-QMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~-~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++.|. ++..|++ .+++|+.++.++. ..+...+..+..+ .++.++.+|+.+.. .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAK-EGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789988876542 3444555 4889999998765 3444455455444 47899999998743 1
Q ss_pred CCCCCEEEEccch-------hhhCHhhHHH-----------HHHHHhcccccCcEEEEE
Q 048309 134 AKKYDRIISCEMM-------EAVGHEYMEE-----------YFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 134 ~~~fD~I~~~~~l-------~~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~ 174 (288)
-+..|+++.+... ..++.++... +.+.+...++.+|.++..
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 1478999976432 2223333322 455667778888887764
No 418
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=89.10 E-value=8.5 Score=32.41 Aligned_cols=89 Identities=15% Similarity=0.245 Sum_probs=54.3
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEE--------c---ccCCCC-CCCC
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYL--------C---DYRQLP-KAKK 136 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~--------~---d~~~~~-~~~~ 136 (288)
.+|.=||+|. |. ++..+++ .+.+|+++|.+++.++..++. |+ .... . +..+.. .-..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~~~~~~~~~----g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWPAHIEAIRKN----GL----IADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHH----CE----EEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHhC----CE----EEEeCCCeeEecceeecchhhcccCCC
Confidence 4788899985 43 3444555 477999999999877655433 32 1111 0 111111 1127
Q ss_pred CCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 137 YDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 137 fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
+|+|+..-.- ....++++++...++++..++.
T Consensus 75 ~d~vi~~v~~-----~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALTKA-----QQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECSCH-----HHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEecc-----ccHHHHHHHHHHhcCCCCEEEE
Confidence 8999875432 3457778888888888776554
No 419
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=89.03 E-value=6.5 Score=35.84 Aligned_cols=95 Identities=17% Similarity=0.259 Sum_probs=59.6
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH-------cC-C------CCceEEEEcccCCCCCC
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNE-------AG-L------QDHIRLYLCDYRQLPKA 134 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~-------~g-~------~~~v~~~~~d~~~~~~~ 134 (288)
.+|.-||+|. |. ++..+++ .+.+|+++|.+++.++.+++.++. .| + .....+ ..|... -
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---~ 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---L 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG---G
T ss_pred CEEEEECcCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH---H
Confidence 5789999997 44 4455555 478999999999988877664321 11 0 011222 344422 2
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
...|+|+..-. +.. .....+++++...++|+..++.
T Consensus 113 ~~aDlVIeaVp-e~~--~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 STVDLVVEAVF-EDM--NLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp TTCSEEEECCC-SCH--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCEEEEcCC-CCH--HHHHHHHHHHHhhCCCCeEEEe
Confidence 46899887532 222 3346788888888888876654
No 420
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=88.93 E-value=2.2 Score=35.32 Aligned_cols=101 Identities=13% Similarity=0.134 Sum_probs=65.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. .+..+++ .+++|+.++.+++.++...+.. + .++.++..|+.+.. .-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVE-GGAEVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788988876542 3444555 4889999999988776655544 2 36899999998753 11
Q ss_pred CCCCEEEEccchh------hhCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 135 KKYDRIISCEMME------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 135 ~~fD~I~~~~~l~------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
+..|+++.+..+. ..+.++... +.+.+...++++|.++...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 4789988765332 223333322 3455666777788877643
No 421
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.71 E-value=1.6 Score=37.87 Aligned_cols=102 Identities=17% Similarity=0.197 Sum_probs=64.6
Q ss_pred CCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH-------cCC-CC---------ceEEEEcccCC
Q 048309 70 EHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNE-------AGL-QD---------HIRLYLCDYRQ 130 (288)
Q Consensus 70 ~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~-------~g~-~~---------~v~~~~~d~~~ 130 (288)
..+|.=||+|+ |. ++..++. .|.+|+.+|++++.++.+.++++. .|. .. +++.. .|+.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh
Confidence 45899999997 43 4555566 489999999999998887766543 121 10 12211 12211
Q ss_pred CCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 131 LPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 131 ~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
.-...|+|+ -.+.+-+ +-..++++++-++++|+..|.-++.+.
T Consensus 84 --a~~~ad~Vi-Eav~E~l--~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 84 --AVEGVVHIQ-ECVPENL--DLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp --HTTTEEEEE-ECCCSCH--HHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred --HhccCcEEe-eccccHH--HHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 123566665 3345555 667889999999999988776655443
No 422
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.69 E-value=1.4 Score=37.56 Aligned_cols=88 Identities=11% Similarity=0.091 Sum_probs=54.5
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccc
Q 048309 68 SKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEM 145 (288)
Q Consensus 68 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~ 145 (288)
..+.+|+=||+|. |......++..+.+|+++|.+++..+.+. ..| ++... ..++. .-...|+|+..-.
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g----~~~~~--~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA----EMG----MEPFH--ISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----SEEEE--GGGHHHHTTTCSEEEECCS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCC----CeecC--hhhHHHHhcCCCEEEECCC
Confidence 4678999999885 66555555556789999999987554332 233 23321 12222 2257999998765
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.+.+.. +....++||+.++-
T Consensus 223 ~~~i~~--------~~l~~mk~~~~lin 242 (293)
T 3d4o_A 223 ALVVTA--------NVLAEMPSHTFVID 242 (293)
T ss_dssp SCCBCH--------HHHHHSCTTCEEEE
T ss_pred hHHhCH--------HHHHhcCCCCEEEE
Confidence 544421 12356789887664
No 423
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.63 E-value=3.3 Score=34.67 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=55.6
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.|+.+|--|++.|. .+..+++ .|++|+.+|.+++.++.+.+.+...| .++..+.+|+.+.. .-
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~-~Ga~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAA-AGARVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-TTCEEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 57788877766553 3445555 48999999999999888887777776 36889999997632 23
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
++.|+++.+..+
T Consensus 85 G~iDiLVNNAG~ 96 (255)
T 4g81_D 85 IHVDILINNAGI 96 (255)
T ss_dssp CCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 689999987543
No 424
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.60 E-value=3.7 Score=28.85 Aligned_cols=68 Identities=12% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCCEEEEECCcc-cHHHH-HHHHccC-CEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC----CCCCCCEEE
Q 048309 69 KEHEVLEIGCGW-GTFAI-EVVRQTG-CNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----KAKKYDRII 141 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~-~la~~~~-~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----~~~~fD~I~ 141 (288)
.+.+|+-+|+|. |.... .+.+ .+ .+|+++|.+++..+... . ..+.++..|..+.. .-..+|+|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~~~d~vi 74 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT-SSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALGGFDAVI 74 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CcCeEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHcCCCEEE
Confidence 356899999953 33322 3333 45 78999999988766544 2 24677888886632 224789998
Q ss_pred Eccc
Q 048309 142 SCEM 145 (288)
Q Consensus 142 ~~~~ 145 (288)
....
T Consensus 75 ~~~~ 78 (118)
T 3ic5_A 75 SAAP 78 (118)
T ss_dssp ECSC
T ss_pred ECCC
Confidence 7653
No 425
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=88.58 E-value=0.31 Score=45.01 Aligned_cols=76 Identities=8% Similarity=0.024 Sum_probs=54.3
Q ss_pred CCEEEEECCcccHHHHHHHHccCC-EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCC---------------
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQTGC-NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPK--------------- 133 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~--------------- 133 (288)
..+++|+-||.|+++.-+.+. |. .|.++|+++.+++.-+.++... +...++.+|+.++..
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999888765 44 4889999998877766664211 234667788866431
Q ss_pred ---CCCCCEEEEccchhhh
Q 048309 134 ---AKKYDRIISCEMMEAV 149 (288)
Q Consensus 134 ---~~~fD~I~~~~~l~~~ 149 (288)
...+|+++....+..+
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC
T ss_pred hhcCCCCCEEEecCCCcch
Confidence 1468999987766554
No 426
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.31 E-value=1.8 Score=37.03 Aligned_cols=88 Identities=17% Similarity=0.150 Sum_probs=54.9
Q ss_pred CCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccc
Q 048309 68 SKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEM 145 (288)
Q Consensus 68 ~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~ 145 (288)
..+.+|+=||+|. |......+...+.+|+++|.+++..+.+. ..| ++... ..++. .-...|+|+..-.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g----~~~~~--~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT----EMG----LVPFH--TDELKEHVKDIDICINTIP 224 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT----CEEEE--GGGHHHHSTTCSEEEECCS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCC----CeEEc--hhhHHHHhhCCCEEEECCC
Confidence 3678999999985 55555555456789999999986544332 223 23221 12222 2257999998766
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.+.++. .....++||++++-
T Consensus 225 ~~~i~~--------~~~~~mk~g~~lin 244 (300)
T 2rir_A 225 SMILNQ--------TVLSSMTPKTLILD 244 (300)
T ss_dssp SCCBCH--------HHHTTSCTTCEEEE
T ss_pred hhhhCH--------HHHHhCCCCCEEEE
Confidence 644421 23477899987664
No 427
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.26 E-value=1.8 Score=35.93 Aligned_cols=105 Identities=13% Similarity=0.089 Sum_probs=64.9
Q ss_pred CCCCCEEEEECCc-ccHH----HHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC---------
Q 048309 67 VSKEHEVLEIGCG-WGTF----AIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--------- 132 (288)
Q Consensus 67 ~~~~~~vLDiGcG-~G~~----~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--------- 132 (288)
..++++||-.|++ +|.+ +..+++ .+++|+.++.+....+.+++..+..+ ++.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKR-EGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHH-cCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHH
Confidence 3467899988864 2333 344444 48899999888655555555544443 4788999998743
Q ss_pred --CCCCCCEEEEccchhh-----------hCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 133 --KAKKYDRIISCEMMEA-----------VGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 --~~~~fD~I~~~~~l~~-----------~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
.-+..|+++.+..+.. .+.++... +.+.+...++++|.++...
T Consensus 87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1247899998654322 23333332 3455666777788877644
No 428
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.15 E-value=2.2 Score=35.16 Aligned_cols=103 Identities=16% Similarity=0.075 Sum_probs=63.3
Q ss_pred CCCEEEEECCcccHHHHHHHHc----cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-C----------
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ----TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-K---------- 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~----~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~---------- 133 (288)
.+++||-.|+ +|.++..+++. .+++|++++.++...+...+.+...+ .++.++.+|+.+.. .
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 4567886664 45444444332 37899999999887766666665544 36899999998743 0
Q ss_pred CCCCCEEEEccchhhh-----C-HhhHH-----------HHHHHHhcccccCcEEEEE
Q 048309 134 AKKYDRIISCEMMEAV-----G-HEYME-----------EYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~-----~-~~~~~-----------~~l~~~~~~LkpgG~l~~~ 174 (288)
.+.+|+++.+...... + .++.. .+++.+...++++|.++..
T Consensus 80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 1378999876543211 0 12221 2445566667777777764
No 429
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.00 E-value=5.2 Score=33.97 Aligned_cols=95 Identities=15% Similarity=0.223 Sum_probs=58.4
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHH-------HcCC-C-------------CceEEEEcc
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVN-------EAGL-Q-------------DHIRLYLCD 127 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~-------~~g~-~-------------~~v~~~~~d 127 (288)
.+|.=||+|. |. ++..+++. +.+|+++|.+++.++.+++.+. +.|. + .++++. .|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 5799999996 54 55666664 7899999999998887655332 1221 0 023322 23
Q ss_pred cCCCCCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEE
Q 048309 128 YRQLPKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 128 ~~~~~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
..+ .-...|+|+..-. +.. +....+++++...++++..++
T Consensus 94 ~~~--~~~~aD~Vi~avp-~~~--~~~~~v~~~l~~~~~~~~iv~ 133 (302)
T 1f0y_A 94 AAS--VVHSTDLVVEAIV-ENL--KVKNELFKRLDKFAAEHTIFA 133 (302)
T ss_dssp HHH--HTTSCSEEEECCC-SCH--HHHHHHHHHHTTTSCTTCEEE
T ss_pred HHH--hhcCCCEEEEcCc-CcH--HHHHHHHHHHHhhCCCCeEEE
Confidence 221 1246899887532 111 234677888888888877554
No 430
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.99 E-value=4.7 Score=34.10 Aligned_cols=104 Identities=18% Similarity=0.165 Sum_probs=66.0
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCC--HHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLS--AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----------- 132 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s--~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------- 132 (288)
.++++|-.|++.|. ++..|++ .|++|+.++.+ +...+...+..+..+ .++.++.+|+.+..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAR-EGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46788988876542 3444555 48899999876 344555555555555 46899999998743
Q ss_pred CCCCCCEEEEccchh-------hhCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 133 KAKKYDRIISCEMME-------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~-------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
.-+..|+++.+.... ..+.++... +.+.+...++++|.++...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 115789998875432 123233322 4556667788888887743
No 431
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=87.93 E-value=5.5 Score=32.45 Aligned_cols=75 Identities=17% Similarity=0.210 Sum_probs=53.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|=.|++.|. ++..+++ .+++|++++.+++..+...+.++..+ .++.++..|+.+.. ..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALAS-KGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 35678877765442 3444455 48899999999988887777777665 36899999998742 23
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 81 ~~id~li~~Ag~ 92 (247)
T 3lyl_A 81 LAIDILVNNAGI 92 (247)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999887543
No 432
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=87.88 E-value=6.9 Score=32.62 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=65.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcC-CHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITL-SAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~-s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++.|. ++..+++ .|++|+.++. +++..+...+.++..+ .++.++.+|+.+.. .
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~-~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLAL-EGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789988876543 3445555 4889998854 4455555555555554 46899999998743 1
Q ss_pred CCCCCEEEEccchh------hhCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMME------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
-+..|+++.+..+. ..+.++... +.+.+...|+++|.++...
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 14799999875432 222233222 3555667777788877653
No 433
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.84 E-value=3 Score=34.87 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=56.7
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
+++.+|--|++.|. .+..+++. |++|+.+|.+++.++.+.+.++..| .++.++..|+.+.. .-
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-Ga~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-DSIVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 57788888877654 34555554 8999999999999988888887776 47899999998743 12
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+..|+++.+..
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 68999998653
No 434
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.80 E-value=0.81 Score=41.95 Aligned_cols=65 Identities=11% Similarity=0.173 Sum_probs=47.1
Q ss_pred CCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEE
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRII 141 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~ 141 (288)
.++|+=+|||. .+..+|+. .+..|+.||.+++.++.+.+.+ .+.++.+|..+.. .-+.+|+++
T Consensus 3 ~M~iiI~G~G~--vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQ--VGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSH--HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred cCEEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 45788888874 33334433 4778999999999887766542 4688999998854 346899988
Q ss_pred Ec
Q 048309 142 SC 143 (288)
Q Consensus 142 ~~ 143 (288)
+.
T Consensus 74 a~ 75 (461)
T 4g65_A 74 AV 75 (461)
T ss_dssp EC
T ss_pred EE
Confidence 75
No 435
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.64 E-value=3.1 Score=35.44 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=54.0
Q ss_pred CCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 70 EHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 70 ~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
..+|.=||+|. |. ++..+++ .+.+|++.|.+++.++.+.+ .|. .....+..+.. ...|+|+..-.-.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~~~~~~~~~----~g~----~~~~~~~~e~~--~~aDvvi~~vp~~ 75 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR-AGLSTWGADLNPQACANLLA----EGA----CGAAASAREFA--GVVDALVILVVNA 75 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHH----TTC----SEEESSSTTTT--TTCSEEEECCSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCeEEEEECCHHHHHHHHH----cCC----ccccCCHHHHH--hcCCEEEEECCCH
Confidence 35788899985 44 4445555 47899999999987766543 243 11233443332 4679998754321
Q ss_pred hhCHhhHHHHH---HHHhcccccCcEEEE
Q 048309 148 AVGHEYMEEYF---GCCESLLAKDGLLVL 173 (288)
Q Consensus 148 ~~~~~~~~~~l---~~~~~~LkpgG~l~~ 173 (288)
......+ +.+...+++|..++.
T Consensus 76 ----~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 76 ----AQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp ----HHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred ----HHHHHHHhChhhHHhhCCCCCEEEe
Confidence 2334454 566677887776553
No 436
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=87.30 E-value=0.63 Score=51.54 Aligned_cols=100 Identities=20% Similarity=0.234 Sum_probs=67.3
Q ss_pred HHcCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEc---ccC----CCCC
Q 048309 63 EKARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLC---DYR----QLPK 133 (288)
Q Consensus 63 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~---d~~----~~~~ 133 (288)
...++++|.+||-.|+ |.|..+..+|+..|++|++++.+++..+.+++.+...|.. .++.. ++. ....
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~---~v~~~~~~~~~~~i~~~t~ 1737 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDET---CFANSRDTSFEQHVLRHTA 1737 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCST---TEEESSSSHHHHHHHHTTT
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCce---EEecCCCHHHHHHHHHhcC
Confidence 4456789999998863 4699999999888889999999998887776643222321 12221 111 1112
Q ss_pred CCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 134 AKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
...+|+|+-... ...+....+.|+++|+++..
T Consensus 1738 g~GvDvVld~~g---------~~~l~~~l~~L~~~Gr~V~i 1769 (2512)
T 2vz8_A 1738 GKGVDLVLNSLA---------EEKLQASVRCLAQHGRFLEI 1769 (2512)
T ss_dssp SCCEEEEEECCC---------HHHHHHHHTTEEEEEEEEEC
T ss_pred CCCceEEEECCC---------chHHHHHHHhcCCCcEEEEe
Confidence 346999986421 24467778999999998874
No 437
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=87.21 E-value=5.3 Score=32.95 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----C-------
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----K------- 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~------- 133 (288)
.++++|-.|++.|. ++..|++ .+++|++++.+++..+...+.+...+ .++.++.+|+.+.. .
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELAS-LGASVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788877765432 3344444 48899999999887766655555444 36889999998742 0
Q ss_pred CCCCCEEEEccc
Q 048309 134 AKKYDRIISCEM 145 (288)
Q Consensus 134 ~~~fD~I~~~~~ 145 (288)
.+..|+++.+..
T Consensus 85 ~g~id~lv~~Ag 96 (260)
T 2ae2_A 85 HGKLNILVNNAG 96 (260)
T ss_dssp TTCCCEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 167999998754
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=87.17 E-value=6.4 Score=33.06 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=53.5
Q ss_pred CEEEEECC-cc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 71 HEVLEIGC-GW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 71 ~~vLDiGc-G~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.+|.=||+ |. |. ++..+++ .+.+|+++|.+++.++.+.+ .|+ .. .+..+ .-...|+|+..-.-
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~~~~~~~~~----~g~----~~--~~~~~--~~~~aDvVi~av~~- 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-SAHHLAAIEIAPEGRDRLQG----MGI----PL--TDGDG--WIDEADVVVLALPD- 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSHHHHHHHHH----TTC----CC--CCSSG--GGGTCSEEEECSCH-
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHh----cCC----Cc--CCHHH--HhcCCCEEEEcCCc-
Confidence 47999999 85 44 3444555 47799999999887765543 343 11 12211 22468999875432
Q ss_pred hhCHhhHHHHHHHHhcccccCcEEE
Q 048309 148 AVGHEYMEEYFGCCESLLAKDGLLV 172 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~LkpgG~l~ 172 (288)
....++++++...+++|..++
T Consensus 78 ----~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 ----NIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp ----HHHHHHHHHHGGGSCTTCEEE
T ss_pred ----hHHHHHHHHHHHhCCCCCEEE
Confidence 335677788888888776544
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=86.84 E-value=5.1 Score=33.20 Aligned_cols=88 Identities=16% Similarity=0.132 Sum_probs=53.8
Q ss_pred CCEEEEECCcc-cH-HHHHHHHccCCE-EEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccch
Q 048309 70 EHEVLEIGCGW-GT-FAIEVVRQTGCN-YTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMM 146 (288)
Q Consensus 70 ~~~vLDiGcG~-G~-~~~~la~~~~~~-v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l 146 (288)
+.+|.=||||. |. ++..+++. +.+ |+++|.+++..+...+. .+ +.+ ..|..+. -...|+|+..-.-
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~---~g----~~~-~~~~~~~--~~~~Dvvi~av~~ 78 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQK---VE----AEY-TTDLAEV--NPYAKLYIVSLKD 78 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHH---TT----CEE-ESCGGGS--CSCCSEEEECCCH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHH---cC----Cce-eCCHHHH--hcCCCEEEEecCH
Confidence 35788899985 44 34444443 666 89999999877655433 23 222 2333332 2468999875432
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
....++++++...+++|..++-
T Consensus 79 -----~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 79 -----SAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp -----HHHHHHHHHHHTTCCTTCEEEE
T ss_pred -----HHHHHHHHHHHhhcCCCcEEEE
Confidence 3346677788788887765554
No 440
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.81 E-value=1.2 Score=40.30 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=55.1
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccc
Q 048309 67 VSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEM 145 (288)
Q Consensus 67 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~ 145 (288)
...|++|+=+|+|. |......++..|.+|+++|.++.....+. ..|. ++ .++.+ .-...|+|+....
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~----~~G~----~v--~~Lee--al~~ADIVi~atg 284 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC----MDGF----RL--VKLNE--VIRQVDIVITCTG 284 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTC----EE--CCHHH--HTTTCSEEEECSS
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH----HcCC----Ee--ccHHH--HHhcCCEEEECCC
Confidence 34788999999997 66666666667889999999986443332 2232 22 23322 2247899988532
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
-.++ +-.+..+.+|+|++++-.
T Consensus 285 t~~l-------I~~e~l~~MK~gailINv 306 (435)
T 3gvp_A 285 NKNV-------VTREHLDRMKNSCIVCNM 306 (435)
T ss_dssp CSCS-------BCHHHHHHSCTTEEEEEC
T ss_pred Cccc-------CCHHHHHhcCCCcEEEEe
Confidence 2222 111334778999877654
No 441
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.73 E-value=5.7 Score=32.99 Aligned_cols=105 Identities=21% Similarity=0.210 Sum_probs=65.7
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcC-CHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITL-SAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~-s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++.|. .+..+++ .+++|+.++. +++..+...+.++..+ .++.++.+|+.+.. .
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~-~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGR-LGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHH-TTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788877766542 3444555 4889998765 4555665555565554 47899999998743 1
Q ss_pred CCCCCEEEEccchhh------hCHhhHHH-----------HHHHHhcccccCcEEEEEee
Q 048309 134 AKKYDRIISCEMMEA------VGHEYMEE-----------YFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~------~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 176 (288)
-+..|+++.+..+.. .+.++... +.+.+...++++|.++....
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 147899987654322 23233322 34566677777888877544
No 442
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.50 E-value=4.3 Score=34.25 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=58.9
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc---------CCC--------CceEEEEcccCCC
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA---------GLQ--------DHIRLYLCDYRQL 131 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~---------g~~--------~~v~~~~~d~~~~ 131 (288)
.+|.=||+|. |. ++..++. .+.+|+++|.+++.++.+.+.+... ++. .++.. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~- 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ- 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH-
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH-
Confidence 4788899986 43 3444454 4889999999999988877653221 110 01222 222222
Q ss_pred CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 132 PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.-...|+|+..-. +.. +....+++++...++|+..++-
T Consensus 82 -~~~~aDlVi~av~-~~~--~~~~~v~~~l~~~~~~~~il~s 119 (283)
T 4e12_A 82 -AVKDADLVIEAVP-ESL--DLKRDIYTKLGELAPAKTIFAT 119 (283)
T ss_dssp -HTTTCSEEEECCC-SCH--HHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HhccCCEEEEecc-CcH--HHHHHHHHHHHhhCCCCcEEEE
Confidence 1256899886532 111 3557788888888988876553
No 443
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.31 E-value=6.6 Score=33.93 Aligned_cols=96 Identities=18% Similarity=0.263 Sum_probs=60.3
Q ss_pred CEEEEECCcc-c-HHHHHHHHccCCEEEEEcCCHHHHHHHHHHHH-------HcCCCC----------ceEEEEcccCCC
Q 048309 71 HEVLEIGCGW-G-TFAIEVVRQTGCNYTGITLSAEQMKYAEMKVN-------EAGLQD----------HIRLYLCDYRQL 131 (288)
Q Consensus 71 ~~vLDiGcG~-G-~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~-------~~g~~~----------~v~~~~~d~~~~ 131 (288)
.+|.=||+|. | .++..+++. |.+|++.|.+++.++.+.+.++ +.|+-+ ++++. .|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e- 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE- 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH-
Confidence 5788899996 4 455666664 8899999999999888866532 223211 23322 22221
Q ss_pred CCCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 132 PKAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 132 ~~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.-...|+|+..-. +.. .....+++++...++|+..++.
T Consensus 84 -av~~aDlVieavp-e~~--~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 -AVEGVVHIQECVP-ENL--DLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp -HTTTEEEEEECCC-SCH--HHHHHHHHHHHTTCCSSSEEEE
T ss_pred -HHhcCCEEEEecc-CCH--HHHHHHHHHHHhhCCCCeEEEE
Confidence 1246888886532 111 3456788899999998886554
No 444
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.24 E-value=6.8 Score=33.14 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=66.5
Q ss_pred CCCEEEEECCc----ccH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------
Q 048309 69 KEHEVLEIGCG----WGT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----------- 132 (288)
Q Consensus 69 ~~~~vLDiGcG----~G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------- 132 (288)
.++++|-.|++ .|. ++..|++. +++|+.++.++...+...+..+..+ ++.++.+|+.+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789989874 343 45555554 8899999998765555555555443 4688999998743
Q ss_pred CCCCCCEEEEccchh----------hhCHhhHHH-----------HHHHHhcccccCcEEEEEee
Q 048309 133 KAKKYDRIISCEMME----------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~----------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~~ 176 (288)
.-+..|+++.+..+. ..+.++... +.+.+...++.+|.++....
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 115799999876432 122233322 34556677777888877543
No 445
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=85.13 E-value=5.8 Score=34.09 Aligned_cols=92 Identities=18% Similarity=0.208 Sum_probs=55.6
Q ss_pred CCCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC---CceEEE-----EcccCCCCCCCCCC
Q 048309 69 KEHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ---DHIRLY-----LCDYRQLPKAKKYD 138 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~---~~v~~~-----~~d~~~~~~~~~fD 138 (288)
...+|.=||+|. |. ++..|++ .+.+|+.+ .+++.++..++. |+. ....+. ..|.. ....+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~~~~~~~i~~~----g~~~~~~~~~~~~~~~~~~~~~---~~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR-AGHEVILI-ARPQHVQAIEAT----GLRLETQSFDEQVKVSASSDPS---AVQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CCHHHHHHHHHH----CEEEECSSCEEEECCEEESCGG---GGTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH-CCCeEEEE-EcHhHHHHHHhC----CeEEEcCCCcEEEeeeeeCCHH---HcCCCC
Confidence 346899999995 54 4555555 47899999 888877666543 220 000110 11111 225789
Q ss_pred EEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 139 RIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 139 ~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+|+..-.- ....++++.+...++++..++..
T Consensus 89 ~vilavk~-----~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 89 LVLFCVKS-----TDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp EEEECCCG-----GGHHHHHHHHTTTSCTTCEEEEE
T ss_pred EEEEEccc-----ccHHHHHHHHHHhcCCCCEEEEe
Confidence 98875332 34577888888899888766653
No 446
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.02 E-value=4.7 Score=32.99 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=54.4
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. ++..+++ .+++|+.+|.+++..+...+.++..+ .++.++.+|+.+.. .-
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAR-EGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888876542 3445555 48899999999998887777776654 47899999998743 11
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 85 g~id~li~~Ag~ 96 (253)
T 3qiv_A 85 GGIDYLVNNAAI 96 (253)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999987654
No 447
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=84.76 E-value=8 Score=32.44 Aligned_cols=88 Identities=19% Similarity=0.262 Sum_probs=53.7
Q ss_pred CEEEEECCcc-cH-HHHHHHHc-cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchh
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQ-TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMME 147 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~-~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~ 147 (288)
.+|.=||+|. |. ++..+++. .+.+|+++|.+++.++.+.+ .|.. .....|..+. -...|+|+..-..
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~---~~~~~~~~~~--~~~aDvVilavp~- 76 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIV---DEATADFKVF--AALADVIILAVPI- 76 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSC---SEEESCTTTT--GGGCSEEEECSCH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCc---ccccCCHHHh--hcCCCEEEEcCCH-
Confidence 5788899986 44 34445543 25799999999987765543 3431 1122333322 2468998875433
Q ss_pred hhCHhhHHHHHHHHhcc-cccCcEEE
Q 048309 148 AVGHEYMEEYFGCCESL-LAKDGLLV 172 (288)
Q Consensus 148 ~~~~~~~~~~l~~~~~~-LkpgG~l~ 172 (288)
.....+++++... ++++..++
T Consensus 77 ----~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 77 ----KKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ----HHHHHHHHHHHTSCCCTTCEEE
T ss_pred ----HHHHHHHHHHHhcCCCCCCEEE
Confidence 3346677778777 88776544
No 448
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.99 E-value=13 Score=29.27 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=54.3
Q ss_pred EEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC--CCCCCCEEEEccch
Q 048309 72 EVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP--KAKKYDRIISCEMM 146 (288)
Q Consensus 72 ~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~--~~~~fD~I~~~~~l 146 (288)
+||=.|+ +|.++..+++. .+.+|++++-++...... . ..+++++.+|+.+.. .-+.+|+|+.....
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~--~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------L--GATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------T--CTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc------c--CCCceEEecccccccHhhcccCCEEEECCcc
Confidence 5776774 44444444332 478999999988654322 1 136899999998765 23578999987654
Q ss_pred hhh--CHhhHHHHHHHHhcccc-cCcEEEEE
Q 048309 147 EAV--GHEYMEEYFGCCESLLA-KDGLLVLQ 174 (288)
Q Consensus 147 ~~~--~~~~~~~~l~~~~~~Lk-pgG~l~~~ 174 (288)
.+- ....-......+.+.++ .|+.+++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 311 00112223344444444 34566554
No 449
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=83.72 E-value=4.8 Score=33.45 Aligned_cols=77 Identities=18% Similarity=0.113 Sum_probs=52.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------CCCCCC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------KAKKYD 138 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------~~~~fD 138 (288)
.++++|-.|++.|. .+..+++ .+++|+.+|.+++..+...+.+...+....+.++..|+.+.. .-+..|
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVA-EGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 46788877765442 3344444 488999999999887776666655543346788899987642 225789
Q ss_pred EEEEccch
Q 048309 139 RIISCEMM 146 (288)
Q Consensus 139 ~I~~~~~l 146 (288)
+++.+..+
T Consensus 88 ~lv~nAg~ 95 (267)
T 3t4x_A 88 ILINNLGI 95 (267)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99987543
No 450
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=83.71 E-value=7.7 Score=33.51 Aligned_cols=92 Identities=17% Similarity=0.177 Sum_probs=53.4
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC---CceE------EEEcccCCCCCCCCCCE
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ---DHIR------LYLCDYRQLPKAKKYDR 139 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~---~~v~------~~~~d~~~~~~~~~fD~ 139 (288)
.+|.=||+|. |. ++..+++ .+.+|+++|.+++.++..++.. ++. .... ....|..+ .-..+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-KGQSVLAWDIDAQRIKEIQDRG---AIIAEGPGLAGTAHPDLLTSDIGL--AVKDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHHT---SEEEESSSCCEEECCSEEESCHHH--HHTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcC---CeEEeccccccccccceecCCHHH--HHhcCCE
Confidence 5788999986 43 3444554 4789999999988776554431 110 0000 01111111 1246898
Q ss_pred EEEccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 140 IISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 140 I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
|+..-.-. ...++++.+...+++|..++.
T Consensus 79 vi~~v~~~-----~~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 79 ILIVVPAI-----HHASIAANIASYISEGQLIIL 107 (359)
T ss_dssp EEECSCGG-----GHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEeCCch-----HHHHHHHHHHHhCCCCCEEEE
Confidence 88754322 235677888888888775554
No 451
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.68 E-value=17 Score=34.87 Aligned_cols=108 Identities=10% Similarity=0.241 Sum_probs=71.4
Q ss_pred CCCEEEEECCcccHHHHHHHHc-c--------CCEEEEEcCCHHHHHHHHHHHHHcC--------------CC-------
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ-T--------GCNYTGITLSAEQMKYAEMKVNEAG--------------LQ------- 118 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~-~--------~~~v~giD~s~~~~~~a~~~~~~~g--------------~~------- 118 (288)
+...|+-+|||.=.....+... + +..++=||. |+.++.=++.++..+ .+
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 3568999999988877777553 2 345666665 555554444454211 00
Q ss_pred --CceEEEEcccCCCC------C-----C-CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecCC
Q 048309 119 --DHIRLYLCDYRQLP------K-----A-KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSSTP 179 (288)
Q Consensus 119 --~~v~~~~~d~~~~~------~-----~-~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 179 (288)
++...+..|+.+.. . + ...-++++-+++.+++++...++++.+.+. ++|.+++.+...+
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~ 258 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIP 258 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecC
Confidence 36889999998742 0 1 223367788899999999999999999864 6777776554444
No 452
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.63 E-value=5.8 Score=33.64 Aligned_cols=75 Identities=19% Similarity=0.185 Sum_probs=55.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. ++..+++ .+++|++++.+++.++.+.+.++..+ .++.++..|+.+.. ..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFAR-RGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 56789988877542 3444555 48899999999998888777777665 36899999998743 11
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999987543
No 453
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=83.63 E-value=11 Score=31.25 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=48.3
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC------CCCCCCE
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP------KAKKYDR 139 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~------~~~~fD~ 139 (288)
.|+.+|--|.+.|. .+..+++ .|++|+.+|.+.. +.+.+.++..| .++..+..|+.+.. ..+..|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~-~Ga~Vvi~~r~~~--~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAA-AGAEVVCAARRAP--DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSCC--HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHH-cCCEEEEEeCCcH--HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 57788877766653 3455555 4899999998743 23334445555 46899999997743 3467999
Q ss_pred EEEccc
Q 048309 140 IISCEM 145 (288)
Q Consensus 140 I~~~~~ 145 (288)
++.+..
T Consensus 83 LVNNAG 88 (247)
T 4hp8_A 83 LVNNAG 88 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998653
No 454
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.62 E-value=4.2 Score=33.02 Aligned_cols=89 Identities=9% Similarity=0.012 Sum_probs=56.2
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEE
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRI 140 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I 140 (288)
...+|+=+|+| ..+..+++. .+. |+++|.+++.++.++ . .+.++.+|..+.. .-..+|+|
T Consensus 8 ~~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 8 KSRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp --CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 34588889885 555555554 356 999999988765443 2 3688999987643 23578998
Q ss_pred EEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 141 ISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 141 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
++...- ...........+.+.|+..++..
T Consensus 76 i~~~~~-----d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 76 IVDLES-----DSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp EECCSC-----HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEcCCC-----cHHHHHHHHHHHHHCCCCeEEEE
Confidence 875321 22333444555667777677664
No 455
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=83.61 E-value=3.3 Score=41.66 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=52.6
Q ss_pred CCCEEEEECCcccHHHHHHHHccCC--EEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCC----------------
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQTGC--NYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQ---------------- 130 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~~~~--~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~---------------- 130 (288)
...+++|+-||.|+++.-+.+. |. .+.++|+++.+++.-+.+.. ...++.+|+.+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~A-G~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQA-GISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHH-TSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCCeEEEeccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhhh
Confidence 3458999999999999888765 54 57799999998876666542 34566666422
Q ss_pred -CCCCCCCCEEEEccchhhh
Q 048309 131 -LPKAKKYDRIISCEMMEAV 149 (288)
Q Consensus 131 -~~~~~~fD~I~~~~~l~~~ 149 (288)
++..+.+|+|+.......+
T Consensus 612 ~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp BCCCTTTCSEEEECCCCTTC
T ss_pred hcccCCCeeEEEEcCCCcch
Confidence 2223579999987765544
No 456
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=83.56 E-value=2.2 Score=31.28 Aligned_cols=68 Identities=10% Similarity=0.198 Sum_probs=41.0
Q ss_pred CCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEEEc
Q 048309 70 EHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRIISC 143 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~~~ 143 (288)
+.+|+=+|+|. |..........+.+|+++|.+++..+.++ .. ...++.+|..+.. ....+|+|+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SY----ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TT----CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 45789999864 44333322224778999999886654332 11 2356777765432 13568999876
Q ss_pred cc
Q 048309 144 EM 145 (288)
Q Consensus 144 ~~ 145 (288)
..
T Consensus 78 ~~ 79 (144)
T 2hmt_A 78 IG 79 (144)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 457
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=83.42 E-value=1.8 Score=36.79 Aligned_cols=59 Identities=17% Similarity=-0.019 Sum_probs=39.8
Q ss_pred EEE-EcccCCCCCCCCCCEEEEccc----hhh----hCH-hhHHHHHHHHhcccccCcEEEEEeecCCC
Q 048309 122 RLY-LCDYRQLPKAKKYDRIISCEM----MEA----VGH-EYMEEYFGCCESLLAKDGLLVLQFSSTPD 180 (288)
Q Consensus 122 ~~~-~~d~~~~~~~~~fD~I~~~~~----l~~----~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (288)
+++ .+|+......+++|+|++.-. -+| ... .-+.-+++.+.++|+|||.+++..+...+
T Consensus 191 t~~~~lDfg~p~~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 191 TFRARLDLGIPGDVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp SEECCGGGCSCTTSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred eeecccccCCccccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 344 677776554477999999632 233 100 22334678889999999999998877664
No 458
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.29 E-value=16 Score=35.52 Aligned_cols=100 Identities=19% Similarity=0.308 Sum_probs=66.1
Q ss_pred CEEEEECCcc-c-HHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-----------C---CCCceEEEEcccCCCCCC
Q 048309 71 HEVLEIGCGW-G-TFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA-----------G---LQDHIRLYLCDYRQLPKA 134 (288)
Q Consensus 71 ~~vLDiGcG~-G-~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~-----------g---~~~~v~~~~~d~~~~~~~ 134 (288)
.+|-=||+|+ | ..+..++. .|..|+.+|++++.++.+++.+... . ...+++ ...|..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~-aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR-VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLR-FSSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEE-EESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHh-CCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhc-ccCcHHHH---
Confidence 5889999998 3 34455555 5899999999999998887655421 0 001111 12222222
Q ss_pred CCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeecC
Q 048309 135 KKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSST 178 (288)
Q Consensus 135 ~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (288)
...|+|+= .+++-+ +-..++++++-.+++|+..|.-++.+.
T Consensus 392 ~~aDlVIE-AV~E~l--~iK~~vf~~le~~~~~~aIlASNTSsl 432 (742)
T 3zwc_A 392 STVDLVVE-AVFEDM--NLKKKVFAELSALCKPGAFLCTNTSAL 432 (742)
T ss_dssp GSCSEEEE-CCCSCH--HHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred hhCCEEEE-eccccH--HHHHHHHHHHhhcCCCCceEEecCCcC
Confidence 45788773 456666 778899999999999998777655443
No 459
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.26 E-value=0.61 Score=40.57 Aligned_cols=56 Identities=14% Similarity=0.235 Sum_probs=40.3
Q ss_pred ceEEE-EcccCCCC---CCCCCCEEEEccchhhh--------C-HhhHHHHHHHHhcccccCcEEEEEe
Q 048309 120 HIRLY-LCDYRQLP---KAKKYDRIISCEMMEAV--------G-HEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 120 ~v~~~-~~d~~~~~---~~~~fD~I~~~~~l~~~--------~-~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
..+++ ++|..+.. +++++|+|++......- . .......+.++.++|+|||.+++..
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 46777 89986532 45789999998654311 0 0245677888999999999999864
No 460
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=83.25 E-value=5.8 Score=34.83 Aligned_cols=95 Identities=15% Similarity=0.258 Sum_probs=57.8
Q ss_pred CCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH------cCCCCceEEEEcccCCCCCCCCCCEEE
Q 048309 70 EHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNE------AGLQDHIRLYLCDYRQLPKAKKYDRII 141 (288)
Q Consensus 70 ~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~------~g~~~~v~~~~~d~~~~~~~~~fD~I~ 141 (288)
..+|.=||+|. |. ++..+++ .+.+|+.+|.+++.++..++.-.. ..++.++.+. .|..+ .-...|+|+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~e--a~~~aDvVi 104 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKA--SLEGVTDIL 104 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHH--HHTTCCEEE
T ss_pred CCeEEEECccHHHHHHHHHHHH-CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHH--HHhcCCEEE
Confidence 35788999985 54 4445554 477899999999887666543110 0111122221 22211 114689988
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
..- +.....++++++...++++..++.
T Consensus 105 laV-----p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 105 IVV-----PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp ECC-----CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred ECC-----CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 753 334567888999999988876554
No 461
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=83.20 E-value=6 Score=34.01 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=49.1
Q ss_pred CEEEEECCcc-cH-HHHHHHHccC-CEEEEEcCCHH---HHHHHHHHHHHcCCCCceEEEEc-ccCCCCCCCCCCEEEEc
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTG-CNYTGITLSAE---QMKYAEMKVNEAGLQDHIRLYLC-DYRQLPKAKKYDRIISC 143 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~-~~v~giD~s~~---~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~fD~I~~~ 143 (288)
.+|.=||+|. |. ++..+++ .+ .+|++.|.+++ ..+...+.+...| + .. +..+. -...|+|+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~-~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g----~---~~~s~~e~--~~~aDvVi~a 94 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGG-RNAARLAAYDLRFNDPAASGALRARAAELG----V---EPLDDVAG--IACADVVLSL 94 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCSEEEEECGGGGCTTTHHHHHHHHHHTT----C---EEESSGGG--GGGCSEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHH-cCCCeEEEEeCCCccccchHHHHHHHHHCC----C---CCCCHHHH--HhcCCEEEEe
Confidence 5788899985 44 3444444 47 89999999872 1111222223333 2 22 33322 2457888875
Q ss_pred cchhhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 144 EMMEAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 144 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
-.- ....+.++.+...|++|..++-
T Consensus 95 vp~-----~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 95 VVG-----AATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp CCG-----GGHHHHHHHHGGGCCTTCEEEE
T ss_pred cCC-----HHHHHHHHHHHhhcCCCCEEEE
Confidence 332 2233445777778887765543
No 462
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.12 E-value=6.1 Score=33.01 Aligned_cols=76 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCC-CCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGL-QDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~-~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++.|. ++..+++ .+++|++++.+++..+...+.+...+. ..++.++.+|+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQ-EGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45678877755432 3344444 488999999998877766655554331 116899999998743 0
Q ss_pred CCCCCEEEEccc
Q 048309 134 AKKYDRIISCEM 145 (288)
Q Consensus 134 ~~~fD~I~~~~~ 145 (288)
-+..|+++.+..
T Consensus 84 ~g~iD~lv~nAg 95 (280)
T 1xkq_A 84 FGKIDVLVNNAG 95 (280)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998754
No 463
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.11 E-value=6.5 Score=32.72 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=52.2
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----C------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----K------A 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~------~ 134 (288)
.++++|-.|++.|. ++..|++ .+++|++++.++...+...+.++..+.+.++.++.+|+.+.. . .
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQ-QGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 46788878765432 2334444 488999999998877776666666655456888999998743 0 1
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+.+|+++.+..
T Consensus 110 g~iD~vi~~Ag 120 (279)
T 1xg5_A 110 SGVDICINNAG 120 (279)
T ss_dssp CCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37999988654
No 464
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.08 E-value=7.1 Score=32.30 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=54.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. .+..++++ +++|+.++.+++.++...+.+...+ .++.++..|+.+.. .-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ-GADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-cCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 56789988876552 34555554 8899999999998887777776665 47899999998743 12
Q ss_pred CCCCEEEEcc
Q 048309 135 KKYDRIISCE 144 (288)
Q Consensus 135 ~~fD~I~~~~ 144 (288)
+..|+++.+.
T Consensus 87 g~id~lv~nA 96 (264)
T 3ucx_A 87 GRVDVVINNA 96 (264)
T ss_dssp SCCSEEEECC
T ss_pred CCCcEEEECC
Confidence 5799999865
No 465
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=82.85 E-value=8.4 Score=32.38 Aligned_cols=76 Identities=14% Similarity=0.140 Sum_probs=50.1
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcC---CCCceEEEEcccCCCC-----C----
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAG---LQDHIRLYLCDYRQLP-----K---- 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g---~~~~v~~~~~d~~~~~-----~---- 133 (288)
.+++||-.|++ |.++..+++. .+++|++++.+++..+...+.+.... ...++.++.+|+.+.. .
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 46788888865 4444444332 47899999999887766655554410 1146899999998743 1
Q ss_pred --CCCCCEEEEccc
Q 048309 134 --AKKYDRIISCEM 145 (288)
Q Consensus 134 --~~~fD~I~~~~~ 145 (288)
-+..|+++.+..
T Consensus 96 ~~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DTFGKINFLVNNGG 109 (303)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 136999998754
No 466
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=82.74 E-value=5.2 Score=34.33 Aligned_cols=77 Identities=9% Similarity=0.108 Sum_probs=55.1
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.+++||-.|++.|. ++..|++ .|++|++++.+++..+.+.+.+...+...++.++..|+.+.. ..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLN-QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCchHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 46789988876543 3444555 488999999999988877777766553337899999998743 12
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 578999987653
No 467
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=82.62 E-value=5.1 Score=32.32 Aligned_cols=70 Identities=14% Similarity=0.168 Sum_probs=44.8
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCce-EEEEcccCC-CC-CCCCCCEEEE
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHI-RLYLCDYRQ-LP-KAKKYDRIIS 142 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v-~~~~~d~~~-~~-~~~~fD~I~~ 142 (288)
.+++||=.|+ +|..+..+++. .+.+|++++-++...+... . .++ +++.+|+.+ +. .-+..|+|+.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~----~~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E----RGASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H----TTCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h----CCCceEEEcccHHHHHHHHcCCCEEEE
Confidence 4678998875 34444333332 4789999998877554322 2 257 899999962 22 3357999998
Q ss_pred ccchh
Q 048309 143 CEMME 147 (288)
Q Consensus 143 ~~~l~ 147 (288)
.....
T Consensus 91 ~ag~~ 95 (236)
T 3e8x_A 91 AAGSG 95 (236)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 76543
No 468
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=82.58 E-value=6.8 Score=32.43 Aligned_cols=103 Identities=11% Similarity=0.118 Sum_probs=62.7
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCC---HHHHHHHHHHHHHcCCCCceEEEEcccCCCC----------
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLS---AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP---------- 132 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s---~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~---------- 132 (288)
.++++|-.|++.| ++..+++. .+++|+.++.+ .+.++...+.++..+ .++.++..|+.+..
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHH
Confidence 4678888887654 33333332 47899998653 445555555555444 47899999998743
Q ss_pred -CCCCCCEEEEccchh------hhCHhhHHH-----------HHHHHhcccccCcEEEEE
Q 048309 133 -KAKKYDRIISCEMME------AVGHEYMEE-----------YFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 -~~~~fD~I~~~~~l~------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~ 174 (288)
.-+..|+++.+..+. ..+.++... +.+.+...|+++|.++..
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 114789998865432 223333322 345556667778887764
No 469
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.48 E-value=1.9 Score=39.29 Aligned_cols=89 Identities=9% Similarity=-0.010 Sum_probs=55.3
Q ss_pred CCCCCEEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccc
Q 048309 67 VSKEHEVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEM 145 (288)
Q Consensus 67 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~ 145 (288)
...|++|+=+|+|. |......++..|++|+++|.++.....+. ..| +++ .++.+.- ...|+|+....
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~----~~G----~~v--v~LeElL--~~ADIVv~atg 311 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA----MDG----FEV--VTLDDAA--STADIVVTTTG 311 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH----HTT----CEE--CCHHHHG--GGCSEEEECCS
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH----hcC----cee--ccHHHHH--hhCCEEEECCC
Confidence 35788999999997 76666666667899999999986433322 223 232 2332222 46899887432
Q ss_pred hhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 146 MEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 146 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
-.|+ +-++....+|+|++++-.
T Consensus 312 t~~l-------I~~e~l~~MK~GAILINv 333 (464)
T 3n58_A 312 NKDV-------ITIDHMRKMKDMCIVGNI 333 (464)
T ss_dssp SSSS-------BCHHHHHHSCTTEEEEEC
T ss_pred Cccc-------cCHHHHhcCCCCeEEEEc
Confidence 2222 112334778999987753
No 470
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.32 E-value=3.8 Score=33.83 Aligned_cols=74 Identities=18% Similarity=0.097 Sum_probs=54.2
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|=.|++.|. ++..++++ |++|+.++.+++.++...+.++..+ .++.++.+|+.+.. .
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAE-GFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHT-TCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 46788888877652 34455554 8899999999888877777776655 47899999998743 1
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 82 g~id~lv~nAg~ 93 (252)
T 3h7a_A 82 APLEVTIFNVGA 93 (252)
T ss_dssp SCEEEEEECCCC
T ss_pred CCceEEEECCCc
Confidence 578999886543
No 471
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=82.25 E-value=4.9 Score=34.69 Aligned_cols=88 Identities=8% Similarity=-0.005 Sum_probs=57.7
Q ss_pred CCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----CCCCCCEEE
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----KAKKYDRII 141 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~~~~fD~I~ 141 (288)
..+++=+|+ |..+..+++. .+. |+.+|.+++.++ +++ . .+.++.+|..+.. .-..+|.++
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~----~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----S----GANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----T----TCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----C----CcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 457888887 4555666554 466 999999998876 442 2 4789999998743 246788888
Q ss_pred EccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 142 SCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 142 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
+... .+...-......+.+.|...++..
T Consensus 183 ~~~~-----~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 183 VDLE-----SDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp ECCS-----SHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred EcCC-----ccHHHHHHHHHHHHHCCCCeEEEE
Confidence 7532 122333444556677787777764
No 472
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=82.20 E-value=5.7 Score=32.79 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=53.7
Q ss_pred CCCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 68 SKEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
..++++|-.|++.|. ++..+++ .+++|+.++.+++..+...+.+...+ .++.++..|+.+.. .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGS-LGARVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAA 103 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHh
Confidence 356788877765432 2334444 48899999999998887777776655 47899999998743 1
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
.+..|+++.+..+
T Consensus 104 ~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 104 HGRCDVLVNNAGV 116 (262)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1479999987554
No 473
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.94 E-value=12 Score=31.16 Aligned_cols=104 Identities=15% Similarity=0.111 Sum_probs=60.9
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHH-HHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAE-QMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~-~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++. .++..+++. .+++|++++.++. ..+...+.++..+ .++.++..|+.+.. .
T Consensus 28 ~~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGR-GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 466788777654 444444332 4889999987754 3344444444444 36889999987643 1
Q ss_pred CCCCCEEEEccchhh------hCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCEMMEA------VGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~~l~~------~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
-+..|+++.+..+.. .+.++... +++.+...|+.+|.++...
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 147899998754322 22233322 3345556666778877654
No 474
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.85 E-value=7.6 Score=32.86 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=50.1
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCC-CCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGL-QDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~-~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++. .++..+++. .+++|++++.+++..+...+.+...+. ..++.++.+|+.+.. .
T Consensus 25 ~~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 467788777554 344433332 488999999998877766655554431 116889999998743 0
Q ss_pred CCCCCEEEEccc
Q 048309 134 AKKYDRIISCEM 145 (288)
Q Consensus 134 ~~~fD~I~~~~~ 145 (288)
-+..|+++.+..
T Consensus 104 ~g~iD~lvnnAG 115 (297)
T 1xhl_A 104 FGKIDILVNNAG 115 (297)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 147899998754
No 475
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=81.26 E-value=0.14 Score=50.37 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=58.1
Q ss_pred cCCCCCCEEEEECC--cccHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-------CCCC
Q 048309 65 ARVSKEHEVLEIGC--GWGTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-------PKAK 135 (288)
Q Consensus 65 ~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-------~~~~ 135 (288)
.++++|.+||-.|+ |.|..+.++++..|++|++++.++ ..+..+ .|. -.++...-.++ ....
T Consensus 341 a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~-----lga---~~v~~~~~~~~~~~i~~~t~g~ 411 (795)
T 3slk_A 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE-----LSR---EHLASSRTCDFEQQFLGATGGR 411 (795)
T ss_dssp TCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC-----SCG---GGEECSSSSTHHHHHHHHSCSS
T ss_pred hCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh-----cCh---hheeecCChhHHHHHHHHcCCC
Confidence 45778999999994 469999999998888999998554 211111 221 11221111111 1235
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.+|+|+-...- ..+....+.|+|+|+++..
T Consensus 412 GvDvVld~~gg---------~~~~~~l~~l~~~Gr~v~i 441 (795)
T 3slk_A 412 GVDVVLNSLAG---------EFADASLRMLPRGGRFLEL 441 (795)
T ss_dssp CCSEEEECCCT---------TTTHHHHTSCTTCEEEEEC
T ss_pred CeEEEEECCCc---------HHHHHHHHHhcCCCEEEEe
Confidence 79999974321 2345667999999999874
No 476
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=81.17 E-value=9.8 Score=32.43 Aligned_cols=95 Identities=20% Similarity=0.256 Sum_probs=57.9
Q ss_pred CCCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccch
Q 048309 69 KEHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMM 146 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l 146 (288)
..++|-=||+|. |. ++..++ . +.+|++.|.+++.++.+.+.+...-+ .++++. .|... -...|+|+..-.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~~~~~~~~~~l~~~~~-~~i~~~-~~~~~---~~~aDlVieavp- 82 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSEKALEAAREQIPEELL-SKIEFT-TTLEK---VKDCDIVMEAVF- 82 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHHSCGGGG-GGEEEE-SSCTT---GGGCSEEEECCC-
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCHHHHHHHHHHHHHHHh-CCeEEe-CCHHH---HcCCCEEEEcCc-
Confidence 456899999996 44 566666 5 88999999999998887765211100 124422 33332 256899887532
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
+.. +-...++.++... ||..+...+
T Consensus 83 e~~--~vk~~l~~~l~~~--~~~Ilasnt 107 (293)
T 1zej_A 83 EDL--NTKVEVLREVERL--TNAPLCSNT 107 (293)
T ss_dssp SCH--HHHHHHHHHHHTT--CCSCEEECC
T ss_pred CCH--HHHHHHHHHHhcC--CCCEEEEEC
Confidence 211 3345667777665 776665433
No 477
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.16 E-value=16 Score=33.30 Aligned_cols=99 Identities=18% Similarity=0.229 Sum_probs=59.0
Q ss_pred CEEEEECCcc-c-HHHHHHHHccCCEEEEEcCCHHHH-HHHHHH---HHHcCC-C--------CceEEEEcccCCCCCCC
Q 048309 71 HEVLEIGCGW-G-TFAIEVVRQTGCNYTGITLSAEQM-KYAEMK---VNEAGL-Q--------DHIRLYLCDYRQLPKAK 135 (288)
Q Consensus 71 ~~vLDiGcG~-G-~~~~~la~~~~~~v~giD~s~~~~-~~a~~~---~~~~g~-~--------~~v~~~~~d~~~~~~~~ 135 (288)
.+|.=||+|+ | .++..+++ .+.+|+++|.+++.. +..++. ..+.|. + .++++ ..|... -.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~-aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a---l~ 129 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGL-AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK---LS 129 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG---CT
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH---Hc
Confidence 5788899996 4 45566666 488999999999821 111111 112221 1 23333 233332 25
Q ss_pred CCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEeec
Q 048309 136 KYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFSS 177 (288)
Q Consensus 136 ~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (288)
..|+|+..-. +-. +....+++++...++|+..++..+.+
T Consensus 130 ~aDlVIeAVp-e~~--~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 130 NCDLIVESVI-EDM--KLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp TCSEEEECCC-SCH--HHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred cCCEEEEcCC-CCH--HHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 6899886532 222 34567889999999998877654433
No 478
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.91 E-value=7.5 Score=32.51 Aligned_cols=75 Identities=15% Similarity=0.175 Sum_probs=53.0
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. .+..|+++ |++|++++.+++..+...+.+...+ .++.++.+|+.+.. .-
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~-G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAAR-GIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46789988876542 34455554 8899999999988877777776655 46899999998743 11
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 100 g~id~lv~nAg~ 111 (279)
T 3sju_A 100 GPIGILVNSAGR 111 (279)
T ss_dssp CSCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 478999987543
No 479
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.87 E-value=8.7 Score=31.86 Aligned_cols=75 Identities=9% Similarity=0.116 Sum_probs=51.7
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|=.|++. .++..+++. .+++|++++.++...+...+.++..+ .++.++.+|+.+.. .-
T Consensus 30 ~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 30 TGEIVLITGAGH-GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 567888888654 344443332 48899999999887776666665544 36899999998743 12
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+.+|+++.+...
T Consensus 107 g~iD~li~~Ag~ 118 (272)
T 1yb1_A 107 GDVSILVNNAGV 118 (272)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 478999987543
No 480
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.83 E-value=7.5 Score=31.99 Aligned_cols=75 Identities=13% Similarity=0.148 Sum_probs=53.6
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|=.|++.|. .+..+++ .+++|+.+|.+++..+...+.++..+ .++.++..|+.+.. .-
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAK-AGASVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHH-HTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788877766542 3444555 48899999999988887777776655 47899999998743 11
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 88 g~id~lv~nAg~ 99 (256)
T 3gaf_A 88 GKITVLVNNAGG 99 (256)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999987543
No 481
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=80.57 E-value=3 Score=36.74 Aligned_cols=89 Identities=15% Similarity=0.151 Sum_probs=53.7
Q ss_pred CCEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-CCCCCCEEEEccch
Q 048309 70 EHEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-KAKKYDRIISCEMM 146 (288)
Q Consensus 70 ~~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~fD~I~~~~~l 146 (288)
..+|.=||+|. |. ++..+++ .+.+|+++|.+++.++.+.+ .|. . ...+..+.. .....|+|+..-.-
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~-~G~~V~v~dr~~~~~~~l~~----~g~----~-~~~s~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK-GGHECVVYDLNVNAVQALER----EGI----A-GARSIEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHT----TTC----B-CCSSHHHHHHHSCSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHH----CCC----E-EeCCHHHHHhcCCCCCEEEEeCCH
Confidence 46898999985 44 3445555 47899999999987665432 232 1 111222211 12345998875433
Q ss_pred hhhCHhhHHHHHHHHhcccccCcEEEE
Q 048309 147 EAVGHEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 147 ~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
. ....++..+...|++|..++-
T Consensus 92 ~-----~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 92 A-----VVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp G-----GHHHHHHHHGGGCCTTCEEEE
T ss_pred H-----HHHHHHHHHHhhCCCCCEEEe
Confidence 2 346677788888887765543
No 482
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.46 E-value=14 Score=33.91 Aligned_cols=98 Identities=21% Similarity=0.215 Sum_probs=61.1
Q ss_pred CEEEEECCcc-c-HHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHH-------cCC-C--------CceEEEEcccCCCC
Q 048309 71 HEVLEIGCGW-G-TFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNE-------AGL-Q--------DHIRLYLCDYRQLP 132 (288)
Q Consensus 71 ~~vLDiGcG~-G-~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~-------~g~-~--------~~v~~~~~d~~~~~ 132 (288)
.+|.=||+|. | .++..+++. +.+|++.|.+++.++.+.+.+.. .|. + .++++ ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~-- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA-- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH--
Confidence 4677789986 4 445566664 78999999999999888765422 111 0 12332 223322
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEEee
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQFS 176 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (288)
-...|+|+..- .+.. .....+++++...++|+..++..+.
T Consensus 82 -~~~aDlVIeAV-pe~~--~vk~~v~~~l~~~~~~~~IlasntS 121 (483)
T 3mog_A 82 -LAAADLVIEAA-SERL--EVKKALFAQLAEVCPPQTLLTTNTS 121 (483)
T ss_dssp -GGGCSEEEECC-CCCH--HHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -hcCCCEEEEcC-CCcH--HHHHHHHHHHHHhhccCcEEEecCC
Confidence 24689888642 2222 3456788899899998887655333
No 483
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=80.35 E-value=22 Score=30.17 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=52.0
Q ss_pred CCEEEEECCcc-cHH-HHHHHHccCC--EEEEEcCCHHHHHH-HHHHHHHcCCCCceEEEEc-ccCCCCCCCCCCEEEEc
Q 048309 70 EHEVLEIGCGW-GTF-AIEVVRQTGC--NYTGITLSAEQMKY-AEMKVNEAGLQDHIRLYLC-DYRQLPKAKKYDRIISC 143 (288)
Q Consensus 70 ~~~vLDiGcG~-G~~-~~~la~~~~~--~v~giD~s~~~~~~-a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~fD~I~~~ 143 (288)
..+|.=||+|. |.. +..++.. +. +|+.+|.+++.++. +.+......+.....+... |... -..+|+|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~aD~Vii~ 82 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI---CRDADMVVIT 82 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG---GTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHH---hCCCCEEEEC
Confidence 35899999986 443 3344443 55 89999999876652 2221111111112333332 3222 2468998876
Q ss_pred cchhhhC---H--------hhHHHHHHHHhcccccCcEEEE
Q 048309 144 EMMEAVG---H--------EYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 144 ~~l~~~~---~--------~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
--....+ . ....++++.+... .|++.++.
T Consensus 83 v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 83 AGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 4222111 0 1223556666653 68887665
No 484
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=80.31 E-value=6.7 Score=32.75 Aligned_cols=85 Identities=13% Similarity=-0.064 Sum_probs=50.7
Q ss_pred EEEEECCcc-cHHHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCCCCCCCCEEEEccchhhhC
Q 048309 72 EVLEIGCGW-GTFAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLPKAKKYDRIISCEMMEAVG 150 (288)
Q Consensus 72 ~vLDiGcG~-G~~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~fD~I~~~~~l~~~~ 150 (288)
+|.=||+|. |......... +.+|+++|.+++..+...+. |. ... +..+ .-...|+|+..-.-.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~----g~----~~~--~~~~--~~~~~D~vi~~v~~~--- 66 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE----FG----SEA--VPLE--RVAEARVIFTCLPTT--- 66 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH----HC----CEE--CCGG--GGGGCSEEEECCSSH---
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC----CC----ccc--CHHH--HHhCCCEEEEeCCCh---
Confidence 577789986 5543333334 77899999998876655432 32 111 1111 124689988754322
Q ss_pred HhhHHHHHHHHhcccccCcEEEE
Q 048309 151 HEYMEEYFGCCESLLAKDGLLVL 173 (288)
Q Consensus 151 ~~~~~~~l~~~~~~LkpgG~l~~ 173 (288)
.....+++++...+++|..++.
T Consensus 67 -~~~~~v~~~l~~~l~~~~~vv~ 88 (289)
T 2cvz_A 67 -REVYEVAEALYPYLREGTYWVD 88 (289)
T ss_dssp -HHHHHHHHHHTTTCCTTEEEEE
T ss_pred -HHHHHHHHHHHhhCCCCCEEEE
Confidence 2235566777788887765553
No 485
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=80.27 E-value=7.6 Score=31.50 Aligned_cols=73 Identities=12% Similarity=0.118 Sum_probs=46.8
Q ss_pred CCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHH-HHcCCCCceEEEEcccCCCC-----C------C
Q 048309 70 EHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKV-NEAGLQDHIRLYLCDYRQLP-----K------A 134 (288)
Q Consensus 70 ~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~-----~------~ 134 (288)
++++|=.|++ |.++..+++. .+++|++++.++...+...+.+ +..+ .++.++.+|+.+.. . -
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA--DKVLRVRADVADEGDVNAAIAATMEQF 78 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG--GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4577877755 3333333332 4789999999987766554443 2222 46899999998743 0 1
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+..|+++.+..
T Consensus 79 ~~id~li~~Ag 89 (250)
T 2cfc_A 79 GAIDVLVNNAG 89 (250)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899998654
No 486
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=80.21 E-value=9.7 Score=31.05 Aligned_cols=74 Identities=12% Similarity=0.173 Sum_probs=50.0
Q ss_pred CCCEEEEECCcccHHHHHHHHc---cCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----C------C
Q 048309 69 KEHEVLEIGCGWGTFAIEVVRQ---TGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----K------A 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----~------~ 134 (288)
.++++|=.|++. .++..+++. .+++|++++.++...+...+.++..+ .++.++.+|+.+.. . .
T Consensus 12 ~~k~vlItGasg-giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 12 DNRVAIVTGGAQ-NIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467888787654 333333332 47899999999887766555555544 36899999998743 0 1
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+..|+++.+..
T Consensus 89 ~~id~vi~~Ag 99 (260)
T 3awd_A 89 GRVDILVACAG 99 (260)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899988654
No 487
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.21 E-value=7.2 Score=32.70 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=53.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCC-C-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQL-P-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~-~-----------~ 133 (288)
.++++|-.|++.|. ++..|++ .+++|++++.+++..+.+.+.+...+- .++.++.+|+.+. . .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~-~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSS-NGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 46788877766442 3444444 488999999999887777766665543 4799999999886 2 1
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
.+..|+++.+..+
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 1479999987654
No 488
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=80.17 E-value=7 Score=35.52 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=55.3
Q ss_pred CEEEEECCcc-cHH-HHHHHHccCCEEEEEcCCHHHHHHHHHHHHH---cCC---------CCceEEEEcccCCCCCCCC
Q 048309 71 HEVLEIGCGW-GTF-AIEVVRQTGCNYTGITLSAEQMKYAEMKVNE---AGL---------QDHIRLYLCDYRQLPKAKK 136 (288)
Q Consensus 71 ~~vLDiGcG~-G~~-~~~la~~~~~~v~giD~s~~~~~~a~~~~~~---~g~---------~~~v~~~~~d~~~~~~~~~ 136 (288)
.+|.=||+|. |.. +..+++ .+.+|+++|.+++.++..++.... .++ ..++++. .|..+. -..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~-~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea--~~~ 78 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE-LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA--VPE 78 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH--GGG
T ss_pred CEEEEECcCHHHHHHHHHHHh-cCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH--Hhc
Confidence 4678899885 443 444555 478999999999887766541000 000 1123322 222221 145
Q ss_pred CCEEEEccchhh-----hCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 137 YDRIISCEMMEA-----VGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 137 fD~I~~~~~l~~-----~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.|+|+..-.-.. .......+.++.+...|++|-.++..
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~ 121 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTK 121 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEe
Confidence 788876432110 00014577788888888877665543
No 489
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=79.94 E-value=8.1 Score=31.81 Aligned_cols=76 Identities=18% Similarity=0.285 Sum_probs=54.6
Q ss_pred CCCEEEEECC-cc--cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGC-GW--GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGc-G~--G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|+ |. |. ++..++++ +++|+.++.+++..+...+.++..+- .++.++.+|+.+.. .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-GADVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4678888886 44 43 44555654 88999999999888777777655442 47999999998743 1
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
-+..|+++.+..+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 1478999987653
No 490
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=79.56 E-value=7.8 Score=32.23 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=53.0
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. ++..|++ .|++|+.++.+++.++...+.++..+ .++.++..|+.+.. .-
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGV-AGAKILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35678877766542 3344454 48899999999988887777776655 46889999998743 11
Q ss_pred CCCCEEEEccch
Q 048309 135 KKYDRIISCEMM 146 (288)
Q Consensus 135 ~~fD~I~~~~~l 146 (288)
+..|+++.+..+
T Consensus 80 g~iD~lVnnAG~ 91 (264)
T 3tfo_A 80 GRIDVLVNNAGV 91 (264)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999987543
No 491
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=79.51 E-value=7.9 Score=31.94 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCEEEEECCcc-cHHHH----HHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------
Q 048309 69 KEHEVLEIGCGW-GTFAI----EVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP----------- 132 (288)
Q Consensus 69 ~~~~vLDiGcG~-G~~~~----~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------- 132 (288)
.++++|-.|++. |..+. .+++ .+++|+.++.++...+...+..+..+ +..++.+|+.+..
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHR-EGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHH-TTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHH-CCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHH
Confidence 467888888641 33333 3444 48899999887622222222222222 3478888987642
Q ss_pred CCCCCCEEEEccchhh-----------hCHhhHHH-----------HHHHHhcccccCcEEEEEe
Q 048309 133 KAKKYDRIISCEMMEA-----------VGHEYMEE-----------YFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~-----------~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 175 (288)
.-+..|+++.+..+.. .+.++... +.+.+...++++|.++...
T Consensus 84 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (265)
T 1qsg_A 84 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLS 148 (265)
T ss_dssp TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEc
Confidence 1247899988754322 33233322 3345556666677777644
No 492
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.45 E-value=8.2 Score=32.04 Aligned_cols=77 Identities=18% Similarity=0.180 Sum_probs=48.2
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcC-CCCceEEEEcccCCCC-----C------
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAG-LQDHIRLYLCDYRQLP-----K------ 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~-----~------ 133 (288)
.++++|-.|++.|. .+..+++ .+++|++++.+++.++...+.+.... ...++.++.+|+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAR-EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 45678867755431 2334444 48899999999887766555542111 1136889999998743 0
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
-+..|+++.+...
T Consensus 84 ~g~id~lv~~Ag~ 96 (278)
T 1spx_A 84 FGKLDILVNNAGA 96 (278)
T ss_dssp HSCCCEEEECCC-
T ss_pred cCCCCEEEECCCC
Confidence 1379999987644
No 493
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=79.11 E-value=17 Score=35.27 Aligned_cols=96 Identities=17% Similarity=0.241 Sum_probs=58.6
Q ss_pred CEEEEECCcc-cH-HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHc-------C---------CCCceEEEEcccCCCC
Q 048309 71 HEVLEIGCGW-GT-FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEA-------G---------LQDHIRLYLCDYRQLP 132 (288)
Q Consensus 71 ~~vLDiGcG~-G~-~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~-------g---------~~~~v~~~~~d~~~~~ 132 (288)
.+|-=||+|. |. ++..+++ .+.+|+++|.+++.++.++..++.. | ...+++.. .|..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~-aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~~--- 387 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL-SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDYE--- 387 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSSG---
T ss_pred cEEEEEcCCHhhHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCHH---
Confidence 3588899986 43 4555555 4789999999999888765543211 1 01233322 2332
Q ss_pred CCCCCCEEEEccchhhhCHhhHHHHHHHHhcccccCcEEEEE
Q 048309 133 KAKKYDRIISCEMMEAVGHEYMEEYFGCCESLLAKDGLLVLQ 174 (288)
Q Consensus 133 ~~~~fD~I~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (288)
.-...|+|+..-. +.. +....+++++...++|+..++..
T Consensus 388 ~~~~aDlVIeaVp-e~~--~vk~~v~~~l~~~~~~~~Ilasn 426 (725)
T 2wtb_A 388 SFRDVDMVIEAVI-ENI--SLKQQIFADLEKYCPQHCILASN 426 (725)
T ss_dssp GGTTCSEEEECCC-SCH--HHHHHHHHHHHHHSCTTCEEEEC
T ss_pred HHCCCCEEEEcCc-CCH--HHHHHHHHHHHhhCCCCcEEEeC
Confidence 2256898886532 222 33567888888889888766443
No 494
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=79.09 E-value=0.55 Score=39.44 Aligned_cols=55 Identities=13% Similarity=0.090 Sum_probs=37.1
Q ss_pred eEEEEcccCCCC---CCCCCCEEEEccchhhh--------CH----hhHHHHHHHHhcccccCcEEEEEe
Q 048309 121 IRLYLCDYRQLP---KAKKYDRIISCEMMEAV--------GH----EYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 121 v~~~~~d~~~~~---~~~~fD~I~~~~~l~~~--------~~----~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
.+++++|..+.. +++++|+|++......- +. ......++.+.++|+|||.+++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 456777775422 45689999987654321 01 234667888899999999998863
No 495
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=79.07 E-value=11 Score=31.01 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=50.7
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. .+..|++ .+++|+.++.+++..+...+.+.......++.++.+|+.+.. .-
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAA-EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46788888865542 3444455 488999999998877666555544311136889999998743 01
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+..|+++.+..
T Consensus 91 g~id~lv~nAg 101 (267)
T 1iy8_A 91 GRIDGFFNNAG 101 (267)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899998754
No 496
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.06 E-value=8.6 Score=31.26 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=49.7
Q ss_pred CCCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-------CCCCC
Q 048309 68 SKEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-------KAKKY 137 (288)
Q Consensus 68 ~~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-------~~~~f 137 (288)
.++++||-.|++.|. ++..+++ .+++|+.++.+++.++...+.+. .++.+...|+.+.. ..+..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHK-LGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHH-CCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 467789977765542 3344444 48899999999887766554432 36889999987642 23579
Q ss_pred CEEEEccch
Q 048309 138 DRIISCEMM 146 (288)
Q Consensus 138 D~I~~~~~l 146 (288)
|+++.+..+
T Consensus 86 d~li~~Ag~ 94 (249)
T 3f9i_A 86 DILVCNAGI 94 (249)
T ss_dssp SEEEECCC-
T ss_pred CEEEECCCC
Confidence 999987654
No 497
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=78.96 E-value=10 Score=31.43 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=52.7
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCC------------HHHHHHHHHHHHHcCCCCceEEEEcccCCCC-
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLS------------AEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP- 132 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s------------~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~- 132 (288)
.++++|-.|++.|. .+..|++ .+++|+++|.+ ++.++...+.++..+ .++.++.+|+.+..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAA-DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHH-CCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 56788988876542 3445555 48899999976 666666655555554 47999999998743
Q ss_pred ----------CCCCCCEEEEccchh
Q 048309 133 ----------KAKKYDRIISCEMME 147 (288)
Q Consensus 133 ----------~~~~fD~I~~~~~l~ 147 (288)
.-+..|+++.+..+.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCC
Confidence 114799999876543
No 498
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.96 E-value=12 Score=30.52 Aligned_cols=74 Identities=14% Similarity=0.126 Sum_probs=51.2
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCCCceEEEEcccCCCC-----------CC
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQDHIRLYLCDYRQLP-----------KA 134 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-----------~~ 134 (288)
.++++|-.|++.|. .+..+++ .+++|+.++.+++.++...+.++..+ .++.++..|+.+.. .-
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAA-EGAAVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788888866442 3344454 48899999999887776666665544 36889999998743 01
Q ss_pred CCCCEEEEccc
Q 048309 135 KKYDRIISCEM 145 (288)
Q Consensus 135 ~~fD~I~~~~~ 145 (288)
+..|+++.+..
T Consensus 83 g~id~lv~nAg 93 (247)
T 2jah_A 83 GGLDILVNNAG 93 (247)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998654
No 499
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=78.90 E-value=10 Score=31.00 Aligned_cols=77 Identities=13% Similarity=0.143 Sum_probs=53.5
Q ss_pred CCCEEEEECCcccH---HHHHHHHccCCEEEEEcCCHHHHHHHHHHHHHcCCC-CceEEEEcccCCCC-----------C
Q 048309 69 KEHEVLEIGCGWGT---FAIEVVRQTGCNYTGITLSAEQMKYAEMKVNEAGLQ-DHIRLYLCDYRQLP-----------K 133 (288)
Q Consensus 69 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~giD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~-----------~ 133 (288)
.++++|-.|++.|. ++..++++ +++|+.++.+++..+...+.+....-. .++.++..|+.+.. .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD-GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH-TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 46788888876542 34455554 889999999998887777666554211 46889999998743 1
Q ss_pred CCCCCEEEEccch
Q 048309 134 AKKYDRIISCEMM 146 (288)
Q Consensus 134 ~~~fD~I~~~~~l 146 (288)
-+..|+++.+..+
T Consensus 85 ~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 85 YGAVDILVNAAAM 97 (250)
T ss_dssp HCCEEEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1478999887544
No 500
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.89 E-value=14 Score=33.46 Aligned_cols=100 Identities=11% Similarity=0.184 Sum_probs=56.7
Q ss_pred CCCCEEEEECCcc-cHH-HHHHHHccCCEEEEEcCCHHHHHHHHHH------------HHHcCCCCceEEEEcccCCCCC
Q 048309 68 SKEHEVLEIGCGW-GTF-AIEVVRQTGCNYTGITLSAEQMKYAEMK------------VNEAGLQDHIRLYLCDYRQLPK 133 (288)
Q Consensus 68 ~~~~~vLDiGcG~-G~~-~~~la~~~~~~v~giD~s~~~~~~a~~~------------~~~~g~~~~v~~~~~d~~~~~~ 133 (288)
..|.++-=||.|. |.. +..+++ .|.+|+++|.+++.++..++. +++.-...++.+- .|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~-~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td~----- 81 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAK-HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TTP----- 81 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SSC-----
T ss_pred ccCCccEEEeeCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cch-----
Confidence 3567777899885 654 445555 488999999999988776542 1110001223332 221
Q ss_pred CCCCCEEEEcc-chhh------hCHhhHHHHHHHHhcccccCcEEEEEe
Q 048309 134 AKKYDRIISCE-MMEA------VGHEYMEEYFGCCESLLAKDGLLVLQF 175 (288)
Q Consensus 134 ~~~fD~I~~~~-~l~~------~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (288)
...|+|+..- +-.. ..-.......+.+...|++|..++...
T Consensus 82 -~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S 129 (431)
T 3ojo_A 82 -EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES 129 (431)
T ss_dssp -CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS
T ss_pred -hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 3578877642 2110 001235667788889999887665543
Done!