Query 048310
Match_columns 102
No_of_seqs 77 out of 101
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 14:26:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048310.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048310hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1knya1 a.24.16.1 (A:126-253) 76.5 1 7.3E-05 29.7 3.1 60 5-94 54-113 (128)
2 d1u5ta1 a.4.5.54 (A:20-164) Va 69.8 0.41 3E-05 32.3 -0.2 23 79-101 20-42 (145)
3 d1t0ga_ d.120.1.2 (A:) Putativ 23.8 24 0.0017 21.8 2.4 27 48-74 77-104 (109)
4 d1nkla_ a.64.1.1 (A:) NK-lysin 22.6 57 0.0042 17.6 4.1 46 46-96 13-58 (78)
5 d1q2ha_ a.34.4.1 (A:) Adapter 21.9 12 0.0009 21.4 0.6 27 64-90 3-29 (63)
6 d1n69a_ a.64.1.3 (A:) Saposin 21.8 33 0.0024 19.0 2.6 20 77-96 41-60 (78)
7 d1l9la_ a.64.1.1 (A:) Granulys 17.3 43 0.0031 18.3 2.4 20 77-96 39-58 (74)
8 d2gc4d1 a.3.1.1 (D:1-147) Cyto 16.5 34 0.0025 21.2 2.0 18 9-26 3-20 (147)
9 d1qhda1 a.115.1.2 (A:1-148,A:3 16.1 36 0.0026 23.2 2.1 32 50-81 124-158 (213)
10 d1of9a_ a.64.1.4 (A:) Ameobapo 14.9 47 0.0034 18.1 2.1 20 77-96 40-59 (77)
No 1
>d1knya1 a.24.16.1 (A:126-253) Kanamycin nucleotidyltransferase (KNTase), C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=76.49 E-value=1 Score=29.75 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=38.6
Q ss_pred ccCcccccccCccccccccccCCCCCCCccChHHHHHHHHHHhhccCCCChHHHHHHHHhHHHHHhhccccCCchHHHHH
Q 048310 5 VSQRQFFHSHRAQPMAWEQVVSDRDSEDEVDDDVADLEDRRMLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACE 84 (102)
Q Consensus 5 l~~R~ffhs~t~~pl~~~e~~~d~DSedE~D~~Wl~~k~r~~l~dF~Dv~~~EKefM~lWN~fv~r~r~~aD~~ip~ac~ 84 (102)
|+||.||+|...++ .|.+ .+.|..++=++.- .++|+=-+..-.+|-.+|+
T Consensus 54 LhNr~~ftT~A~vl---~Eal-----------------------~lp~~p~g~d~l~----~~vm~G~L~~~~~i~~~CE 103 (128)
T d1knya1 54 LHHRICYTTSASVL---TEAV-----------------------KQSDLPSGYDHLC----QFVMSGQLSDSEKLLESLE 103 (128)
T ss_dssp HHHTCCCSSSSSHH---HHHT-----------------------TSSSCCTTHHHHH----HHHHHTBCCCHHHHHHHHH
T ss_pred HhhhhhhcccccCc---HHHh-----------------------cCCCCChhHHHHH----HHHHcccccchHHHHHHHH
Confidence 79999999998763 2222 2344444444432 2456645555678999999
Q ss_pred HHHHHHHhhh
Q 048310 85 AFTKLYGHDL 94 (102)
Q Consensus 85 ~Fv~~~~~~L 94 (102)
+|.+.--+|-
T Consensus 104 ~~w~Gl~~w~ 113 (128)
T d1knya1 104 NFWNGIQEWT 113 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9988765553
No 2
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.78 E-value=0.41 Score=32.27 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHhhhhcCCCCC
Q 048310 79 IPWACEAFTKLYGHDLVQAPALK 101 (102)
Q Consensus 79 ip~ac~~Fv~~~~~~L~~~~~l~ 101 (102)
+-.+.+.|++.|+.+|.+||++|
T Consensus 20 F~~~L~~FA~kH~~eI~~np~FR 42 (145)
T d1u5ta1 20 FQERLVEFAKKHNSELQASPEFR 42 (145)
T ss_dssp HHHHHHHHHHHCTTTTTTCHHHH
T ss_pred HHHHHHHHHHHhHHHhhcCHHHH
Confidence 45688999999999999999876
No 3
>d1t0ga_ d.120.1.2 (A:) Putative steroid binding protein AT2G24940 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.82 E-value=24 Score=21.83 Aligned_cols=27 Identities=19% Similarity=0.349 Sum_probs=21.3
Q ss_pred hccCCCChHHHHHHHHhHHHHH-hhccc
Q 048310 48 DDFVDVTKDEKQMMHMWNSFVR-KQRVL 74 (102)
Q Consensus 48 ~dF~Dv~~~EKefM~lWN~fv~-r~r~~ 74 (102)
.+-+|++++|++-|..|-.|.. |++++
T Consensus 77 ~d~~~L~~~e~~~L~~W~~~f~~kY~~V 104 (109)
T d1t0ga_ 77 PSLEGLTEKEINTLNDWETKFEAKYPVV 104 (109)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHTTSCEE
T ss_pred CcccCCCHHHHHHHHHHHHHHhcCCCEE
Confidence 3457899999999999999886 44444
No 4
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.63 E-value=57 Score=17.55 Aligned_cols=46 Identities=13% Similarity=0.219 Sum_probs=32.2
Q ss_pred HhhccCCCChHHHHHHHHhHHHHHhhccccCCchHHHHHHHHHHHHhhhhc
Q 048310 46 MLDDFVDVTKDEKQMMHMWNSFVRKQRVLADGHIPWACEAFTKLYGHDLVQ 96 (102)
Q Consensus 46 ~l~dF~Dv~~~EKefM~lWN~fv~r~r~~aD~~ip~ac~~Fv~~~~~~L~~ 96 (102)
.++++..-+..+.++.+.-+..=..-+ .+...|..||..|+..|+.
T Consensus 13 ~~~~~l~~~~t~~~I~~~l~~~C~~lp-----~~~~~C~~~v~~y~~~ii~ 58 (78)
T d1nkla_ 13 KLEDMVGPQPNEDTVTQAASQVCDKLK-----ILRGLCKKIMRSFLRRISW 58 (78)
T ss_dssp HHHHHHCSSCCHHHHHHHHHHHHHHSC-----STHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCccHHHHHHHHHHHHhcCC-----cHHHHHHHHHHHHHHHHHH
Confidence 345555556678888888887665432 2556899999999987764
No 5
>d1q2ha_ a.34.4.1 (A:) Adapter protein APS, dimerisation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.90 E-value=12 Score=21.37 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=18.5
Q ss_pred hHHHHHhhccccCCchHHHHHHHHHHH
Q 048310 64 WNSFVRKQRVLADGHIPWACEAFTKLY 90 (102)
Q Consensus 64 WN~fv~r~r~~aD~~ip~ac~~Fv~~~ 90 (102)
|..|--+|-..|-..+..+|..|+..|
T Consensus 3 W~EFCE~HAr~AA~dFAr~~~~f~~~n 29 (63)
T d1q2ha_ 3 WRQFCELHAQAAAVDFAHKFCRFLRDN 29 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 666666666666667777777777666
No 6
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.76 E-value=33 Score=18.98 Aligned_cols=20 Identities=15% Similarity=0.312 Sum_probs=17.4
Q ss_pred CchHHHHHHHHHHHHhhhhc
Q 048310 77 GHIPWACEAFTKLYGHDLVQ 96 (102)
Q Consensus 77 ~~ip~ac~~Fv~~~~~~L~~ 96 (102)
+.+...|..||..|+..|+.
T Consensus 41 ~~~~~~C~~~V~~y~~~ii~ 60 (78)
T d1n69a_ 41 PGMADICKNYISQYSEIAIQ 60 (78)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHHH
Confidence 57789999999999998864
No 7
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.32 E-value=43 Score=18.33 Aligned_cols=20 Identities=20% Similarity=0.428 Sum_probs=17.0
Q ss_pred CchHHHHHHHHHHHHhhhhc
Q 048310 77 GHIPWACEAFTKLYGHDLVQ 96 (102)
Q Consensus 77 ~~ip~ac~~Fv~~~~~~L~~ 96 (102)
+.+...|..||..|+..|+.
T Consensus 39 ~~~~~~C~~lv~~Y~~~ii~ 58 (74)
T d1l9la_ 39 SRWRDVCRNFMRRYQSRVIQ 58 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999998864
No 8
>d2gc4d1 a.3.1.1 (D:1-147) Cytochrome c551 {Paracoccus denitrificans [TaxId: 266]}
Probab=16.52 E-value=34 Score=21.20 Aligned_cols=18 Identities=22% Similarity=0.621 Sum_probs=16.1
Q ss_pred ccccccCccccccccccC
Q 048310 9 QFFHSHRAQPMAWEQVVS 26 (102)
Q Consensus 9 ~ffhs~t~~pl~~~e~~~ 26 (102)
+|||+-+.-||+.++.++
T Consensus 3 ~~~~~~~~~pl~~~~~~~ 20 (147)
T d2gc4d1 3 QFFNIIDGSPLNFDDAME 20 (147)
T ss_dssp CCBCTTTCCBCCGGGSCS
T ss_pred eeeecCCCCcCCcccccc
Confidence 799999999999998763
No 9
>d1qhda1 a.115.1.2 (A:1-148,A:333-397) vp6, the major capsid protein of group A rotavirus {Bovine rotavirus [TaxId: 10927]}
Probab=16.09 E-value=36 Score=23.23 Aligned_cols=32 Identities=34% Similarity=0.518 Sum_probs=23.7
Q ss_pred cCCCChH-HHHHHHHhHHHHHhhc--cccCCchHH
Q 048310 50 FVDVTKD-EKQMMHMWNSFVRKQR--VLADGHIPW 81 (102)
Q Consensus 50 F~Dv~~~-EKefM~lWN~fv~r~r--~~aD~~ip~ 81 (102)
|--+|-. +-||++.||.--+||| +++|++-|-
T Consensus 124 fk~Inf~NsSe~IeNWn~QnrrqRtSVL~Da~e~~ 158 (213)
T d1qhda1 124 FKRINFDNSSEYIENWNLQNRRQRTSVLADASETM 158 (213)
T ss_dssp GGGGCCCCCSHHHHHHHHHHTTCCCSCCCCSSCCH
T ss_pred eeEeecCCchHHHhccchhcchhcceeeccCCchH
Confidence 3344433 6689999999999997 688887553
No 10
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=14.94 E-value=47 Score=18.12 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.3
Q ss_pred CchHHHHHHHHHHHHhhhhc
Q 048310 77 GHIPWACEAFTKLYGHDLVQ 96 (102)
Q Consensus 77 ~~ip~ac~~Fv~~~~~~L~~ 96 (102)
+.+...|..||..|+..|+.
T Consensus 40 ~~~~~~C~~~v~~y~~~ii~ 59 (77)
T d1of9a_ 40 GFIATLCTKVLDFGIDKLIQ 59 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHHH
Confidence 57788999999999988864
Done!