BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048311
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6H5X0|RIP2_ORYSJ Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica
GN=Os02g0637000 PE=3 SV=1
Length = 192
Score = 186 bits (472), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/192 (53%), Positives = 119/192 (61%), Gaps = 21/192 (10%)
Query: 9 VVLLICVLALVSL------------GVE-AGTCNPSGKIRGKKPPPGQCNQENYSDCCKQ 55
+ L I L LVSL G E AG CNPSG +R + Q DCCK
Sbjct: 8 LALAIAGLVLVSLPGLSRGDVDARRGRELAGGCNPSGTLRPSRSHSCQ-------DCCKA 60
Query: 56 GKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKG 115
G+ Y + CSP TG TKA +TLN F+ GGDGG PSECD ++H + E VVALSTGWY G
Sbjct: 61 GRSYPTYACSPATTGSTKAVMTLNDFEAGGDGGDPSECDGKFHKNTERVVALSTGWYANG 120
Query: 116 SRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVP-Q 174
RC I I NG SV AKVVDECDS GCD +H YQPPCR N+VDAS+AVW+AL + +
Sbjct: 121 RRCNKNIRINANGRSVLAKVVDECDSLHGCDKEHAYQPPCRPNVVDASQAVWDALRITGE 180
Query: 175 SKGEMEIYWSDA 186
GE +I WSDA
Sbjct: 181 DVGEYDITWSDA 192
>sp|Q7XVA8|RIP1_ORYSJ Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica
GN=Os04g0364800 PE=3 SV=2
Length = 183
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 118/188 (62%), Gaps = 9/188 (4%)
Query: 1 MKKQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYS 60
M L + + + +++L L G CNPSG IR Q DCCK G+ Y
Sbjct: 3 MTNCLLALAIAGVVLVSLPGLSRGDGECNPSGAIRSSTTHRCQ-------DCCKAGQSYP 55
Query: 61 IFRCSPTVTG-HTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCL 119
+ CSP TG T A +TLN F GGDGGGPSECD YHS+ E VVALSTGWY GSRC
Sbjct: 56 TYTCSPPTTGSSTDAVMTLNDFDAGGDGGGPSECDEMYHSNTELVVALSTGWYAGGSRCG 115
Query: 120 NYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVP-QSKGE 178
+ I NG SV AKVVDECDS GCD +H YQPPCR N+VDAS+AVW+ALG+ + GE
Sbjct: 116 KSVRINANGRSVLAKVVDECDSQRGCDEEHAYQPPCRPNVVDASQAVWDALGITGEDVGE 175
Query: 179 MEIYWSDA 186
+I WSDA
Sbjct: 176 YDITWSDA 183
>sp|P84527|KIWEL_ACTDE Kiwellin OS=Actinidia deliciosa PE=1 SV=1
Length = 189
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 112/185 (60%), Gaps = 5/185 (2%)
Query: 3 KQLSSCVVLLICVLALVSLGVEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIF 62
+ L+ C LIC+ + + GT G +P G C C +GK Y +
Sbjct: 9 RDLNDCDGQLICIKGKCNDDPQVGTHICRGTTHSHQP--GGCKPSGTLTC--RGKSYPTY 64
Query: 63 RCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYI 122
CSP VT T A LT N F +GGD GGPSECD YH+++E +VALSTGWYN GSRC I
Sbjct: 65 DCSPPVTSSTPAKLTNNDFSEGGDDGGPSECDESYHNNNERIVALSTGWYNGGSRCGKMI 124
Query: 123 NIYG-NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEI 181
I NG SV AKVVDECDS GCD +H QPPCRNNIVD S AVW ALG+ ++ G ++I
Sbjct: 125 RITASNGKSVSAKVVDECDSRHGCDKEHAGQPPCRNNIVDGSNAVWSALGLDKNVGVVDI 184
Query: 182 YWSDA 186
WS A
Sbjct: 185 TWSMA 189
>sp|Q9M4H4|GRI22_VITVI Ripening-related protein grip22 OS=Vitis vinifera GN=grip22 PE=2
SV=1
Length = 220
Score = 163 bits (413), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/135 (60%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
Query: 53 CKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWY 112
CK GK + + CSP +T T A LT N+F+KGGDGGGPS CDN+YH + E +VALSTGWY
Sbjct: 86 CKGGKPKNTYTCSPPITSSTPAVLTNNNFEKGGDGGGPSACDNKYHDNSERIVALSTGWY 145
Query: 113 NKGSRCLNYINIYG-NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALG 171
N GSRC I I NG SV AKVVDECDS GCD +H QPPC NNIVD S AVW ALG
Sbjct: 146 NGGSRCGKMIRITAQNGRSVLAKVVDECDSMHGCDKEHAGQPPCDNNIVDGSNAVWNALG 205
Query: 172 VPQSKGEMEIYWSDA 186
+ + GE+++ WS A
Sbjct: 206 LDINIGEVDVTWSMA 220
>sp|Q8LN49|RIP5_ORYSJ Putative ripening-related protein 5 OS=Oryza sativa subsp. japonica
GN=Os10g0490500 PE=3 SV=1
Length = 276
Score = 157 bits (396), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 107/183 (58%), Gaps = 28/183 (15%)
Query: 9 VVLLICVLALVSLG-----VEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFR 63
++ L+ L+ L V AG C PSG + GK G C + N DCC+ GK Y +R
Sbjct: 3 MIFLLAALSTTHLASSLRPVAAGACRPSGYLPGKS---GNCEKSNDPDCCEDGKAYPQYR 59
Query: 64 CSPTVTGHTKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYIN 123
F+KG DGGGPSECDN YHSD E VVALSTGW+ +RC + +
Sbjct: 60 -----------------FEKGKDGGGPSECDNAYHSDGELVVALSTGWFAGTARCGHRVR 102
Query: 124 IY---GNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEME 180
I G G SV AKVVDECDS GCD +H+Y+ PC NNIVDAS AVW+ALG+ ++ G
Sbjct: 103 ITASGGGGRSVVAKVVDECDSVHGCDGEHNYEAPCGNNIVDASPAVWDALGLDKNVGMEH 162
Query: 181 IYW 183
I W
Sbjct: 163 ITW 165
>sp|Q9FWT5|RIP3_ORYSJ Ripening-related protein 3 OS=Oryza sativa subsp. japonica
GN=Os10g0490100 PE=2 SV=1
Length = 213
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 110/168 (65%), Gaps = 7/168 (4%)
Query: 23 VEAGTCNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGH---TKATLTLN 79
+++ +C PSG I G G CN +N S+CC+ G Y + CSP V T A LTLN
Sbjct: 49 LQSSSCQPSGAITGTS---GDCNADNGSECCQDGVQYMTYACSPPVAAGGTGTAALLTLN 105
Query: 80 SFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGN-SVKAKVVDE 138
SF GGDGGG C +++ D + VVALSTGW++ SRC + I +G SV A VVDE
Sbjct: 106 SFADGGDGGGAPSCTGRFYDDGQLVVALSTGWFDGRSRCEKDVVIRASGGASVTAMVVDE 165
Query: 139 CDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSDA 186
CDS GCDSDH+++PPCRNNIVD S AVW+ALG+ + GE +I WSDA
Sbjct: 166 CDSQRGCDSDHNFEPPCRNNIVDGSPAVWDALGLNKDDGEAQITWSDA 213
>sp|Q9FWU1|RIP4_ORYSJ Putative ripening-related protein 4 OS=Oryza sativa subsp. japonica
GN=Os10g0490666 PE=3 SV=2
Length = 216
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 111/163 (68%), Gaps = 8/163 (4%)
Query: 28 CNPSGKIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGH--TKATLTLNSFQKGG 85
C+ SG + GK G+CN+ + SDCC G+ Y FRCSP V+ T ATLTLNSF +GG
Sbjct: 56 CHISGFLHGKA---GKCNRAHGSDCCVTGRRYPQFRCSPPVSSARPTPATLTLNSFARGG 112
Query: 86 DGGGPSECDNQYHSDDEPVVALSTGWY--NKGSRCLNYINIY-GNGNSVKAKVVDECDST 142
DGGG S CD ++H D VVALS+GW + SRC I + GNG S A+VVDECDS
Sbjct: 113 DGGGRSSCDGRFHPDTAMVVALSSGWLRLDGASRCNRMIRVAAGNGRSALARVVDECDSV 172
Query: 143 MGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYWSD 185
GCD++H+++PPC N++VD S AVW+ALG+ + GE ++ WSD
Sbjct: 173 NGCDAEHNFEPPCPNDVVDGSPAVWKALGLDEGVGEFKVTWSD 215
>sp|Q7XD65|RIP7_ORYSJ Putative ripening-related protein 7 OS=Oryza sativa subsp. japonica
GN=Os10g0489400 PE=3 SV=1
Length = 162
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 20/122 (16%)
Query: 74 ATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRCLNYINIYGNGN---- 129
A +T+N F+KG DGGGP+ CD YHSD E +VALST W+ G RC I I + +
Sbjct: 50 AVMTVNGFEKGEDGGGPAACDGHYHSDGELIVALSTEWFAGGRRCHRRIRITPSEHGRRG 109
Query: 130 ------SVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSKGEMEIYW 183
+V+A VVDECDS G C++++VD+S AVW ALG+ GE+ + W
Sbjct: 110 GGGGRRAVEATVVDECDSRRG----------CKDDVVDSSPAVWRALGLDTDSGEVRVTW 159
Query: 184 SD 185
SD
Sbjct: 160 SD 161
>sp|Q7XD66|RIP6_ORYSJ Putative ripening-related protein 6 OS=Oryza sativa subsp. japonica
GN=Os10g0489301 PE=3 SV=1
Length = 167
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 13/130 (10%)
Query: 61 IFRCS-PTVTGH-TKATLTLNSFQKGGDGGGPSECDNQYHSDDEPVVALSTGWYNKGSRC 118
+ RCS P V+ T A +T+N F++G DGGGP+ CD +YHSD V ALSTGW+ G RC
Sbjct: 47 MRRCSSPAVSEDGTPAVMTVNGFEEGEDGGGPAACDGRYHSDRSLVAALSTGWFAGGRRC 106
Query: 119 LNYINIYG--NGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDASKAVWEALGVPQSK 176
I I NG SV A VVDECDS G C+++IVD S AVW ALG+ +
Sbjct: 107 HRGIRITSRQNGRSVVATVVDECDSRHG---------GCKDDIVDTSAAVWSALGLDTNV 157
Query: 177 GEMEIYWSDA 186
GE+ + WSDA
Sbjct: 158 GEVPVTWSDA 167
>sp|Q5HYK9|ZN667_HUMAN Zinc finger protein 667 OS=Homo sapiens GN=ZNF667 PE=2 SV=2
Length = 610
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 33 KIRGKKPPPGQCNQENYSDCCKQGKLYSIFRCSPTVTGHTKATLTLNSFQKGGDGGGPSE 92
K KK PP QCN+ S C KL S + +PT L +KG G P +
Sbjct: 89 KCETKKLPPNQCNKSGQSIC---QKLVSAQQKAPTRKSGCNKNSVLVKPKKGHSGKKPLK 145
Query: 93 CDN 95
C++
Sbjct: 146 CND 148
>sp|Q7KWS2|EXPL3_DICDI Expansin-like protein 3 OS=Dictyostelium discoideum GN=expl3 PE=2
SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 104 VVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDHDYQPPCRNNIVDAS 163
+ AL + Y G++C I NS A V + M DS HD R+N D S
Sbjct: 62 IAALGSKLYQNGAQCGQCFKI---SNSKNASV-----TVMATDSCHDAGYCQRDNHFDLS 113
Query: 164 KAVWEALGVPQSKGEME 180
A + LG PQS+G ++
Sbjct: 114 PAAFSILG-PQSQGVLD 129
>sp|Q54PA4|EXPL2_DICDI Expansin-like protein 2 OS=Dictyostelium discoideum GN=expl2 PE=3
SV=1
Length = 407
Score = 30.4 bits (67), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 104 VVALSTGWYNKGSRCLNYINIYGNGNSVKAKVVDECDSTMGCDSDH---DYQPPCRNNIV 160
+ A +T YN C IYG G + K +VD+C CD+ D P N +
Sbjct: 61 IAAAATALYNGSFACGECYEIYGPGGTGKVMIVDQCPDPGWCDTPFPHLDLSPTAFNTTI 120
Query: 161 DASKAV 166
++ V
Sbjct: 121 GSTVGV 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,080,190
Number of Sequences: 539616
Number of extensions: 3439586
Number of successful extensions: 4532
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4504
Number of HSP's gapped (non-prelim): 22
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)