BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048313
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84K34|SIL10_ARATH E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana
GN=At5g37930 PE=2 SV=1
Length = 349
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 120/224 (53%), Gaps = 3/224 (1%)
Query: 30 LSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEK 89
+ + +C NGH+ C CC ++ N+CPSC LPIG+ R AMEKV+E+ +V+C N +GCKE
Sbjct: 122 IPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKES 181
Query: 90 MSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDKVLRITLS 149
SY ++ H + C CSCP+ C++ G + + H R HK FV++ L I+L
Sbjct: 182 TSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLD 241
Query: 150 VHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PCKGGIVYSIVAKSGGAAYKF 207
++ LQEE +G + ++ H +SV+CIAP P G + + + + K
Sbjct: 242 LNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQ 301
Query: 208 NSCTKSIQNWDENNPPSVASLLVPSDFFGSYGQLNLEVRIQHPK 251
K+IQ N P +L+PS F LNL++ I H +
Sbjct: 302 GFMVKNIQKV-TNEHPEDGFMLIPSYLFSGNDNLNLQIWIGHGR 344
>sp|Q9C6H3|SINL2_ARATH E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana
GN=At1g66620 PE=2 SV=1
Length = 313
Score = 138 bits (347), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGHI C+ CC +L NKCPSC LPIG+ RS ME+V+E++ VTC N HGC EK S
Sbjct: 55 IFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFS 114
Query: 92 YSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDKVLRITLSVH 151
Y K+ H K C A C CP CN+ G + +Y HF H + L +
Sbjct: 115 YGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDTWNQIGCGNFAGAWLRIS 174
Query: 152 HDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PCKGGIVYSIVAK---SGGAAYK 206
++ LQ + G L + E G ++VNCIAP P G + + + K G +
Sbjct: 175 EKILVLQYGQ-GPLIAVQCFKETQGMYVTVNCIAPCAPGVGELSFELSYKMPMGGNSTMM 233
Query: 207 FNSCTKSIQNWDENNPPSVASLLVPSDFFGSYGQLNLEVRIQHPKK 252
F S + P +LVP F G + L +E+ I+ KK
Sbjct: 234 FKSEEMNRIQKVSFQTPEKDFMLVPYYFLGDFSTLKMEICIRKLKK 279
>sp|Q9FKD7|SINL7_ARATH E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana
GN=At5g37890 PE=2 SV=1
Length = 286
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 98/174 (56%), Gaps = 5/174 (2%)
Query: 15 VLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLES 74
+L C I + +F + +C NGH+ C+ CC +L NKCP+C P+GH+R AME VLES
Sbjct: 48 ILDCPICYEAFTIPIF---QCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLES 104
Query: 75 IQVTCENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHA 134
I + C N GCK+ +SY K+ H K C + C+CP CN+ S+ +Y H+R H
Sbjct: 105 ILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHMEI 164
Query: 135 AE--EFVYDKVLRITLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP 186
+ F+ D L + +++ ++ E LF + EP+G ++V+CIAP
Sbjct: 165 NQINTFICDIPLSVRMNISKKILIRTEHLTNHLFAVQCFREPYGVYVTVSCIAP 218
>sp|Q9FKD9|SINL6_ARATH Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis
thaliana GN=At5g37870 PE=3 SV=1
Length = 281
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 15 VLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLES 74
+L C I + + + V +CGNGH+ C+ CC +L NKCP+C LP+GH R AME+VLES
Sbjct: 42 ILDCPICYQAL---KIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLES 98
Query: 75 IQVTCENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHA 134
+ V C D GC + + Y ++ H K C+ + CSCP+ CN+ GS+ +Y+H+ H
Sbjct: 99 VLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTG 158
Query: 135 AEEFVYDKVLRIT--LSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP 186
+ + ++ V I + + ++ + + LF++ EP G +SV+CIAP
Sbjct: 159 STAYSFNGVSYIAAMMFISDKILIERVYEKKLLFVVQCFEEPCGVYVSVSCIAP 212
>sp|Q9FM14|SIL11_ARATH E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana
GN=At5g62800 PE=2 SV=2
Length = 314
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 10 VLCTTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPS--CRLPIGHSRSIA 67
+L VL C + F + +C +GHIVCN C ++ NKCP C LPIG+ R A
Sbjct: 35 LLDLDVLDCPVCFEPLT---IPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFA 91
Query: 68 MEKVLESIQVTCENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHF 127
ME+VLES V C+N + GC + +SY K H K C++++CSCP CN+ GS+N IY HF
Sbjct: 92 MERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHF 151
Query: 128 RGVHKH----AAEEFVYDKVLRITLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNC 183
H + + ++ Y V + +++ + L E + LF++ E HG ++V
Sbjct: 152 MRRHLYNSTIVSSKWGYSTV-DVLINIKEKVSVLWESRQKLLFVVQCFKERHGVYVTVRR 210
Query: 184 IAPP 187
IAPP
Sbjct: 211 IAPP 214
>sp|Q9C9M0|SINL4_ARATH E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana
GN=At1g66650 PE=2 SV=1
Length = 329
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 16/240 (6%)
Query: 17 HCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQ 76
+CF IF +C NGH+ C CCI+L +C C+LPIG R AMEKV+++
Sbjct: 88 NCFDPLKKPIF------QCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGL 141
Query: 77 VTCENEDHGCKEKMSYSKKYD-HGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAA 135
V+C N +GCK+ +Y + H K C A CSCP+ CN++G + + HFR HK +
Sbjct: 142 VSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATHKVSP 201
Query: 136 EE---FVYDK--VLRITLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PC 188
+ FV+D+ + + L ++ EEK G+LF++ HG +V+ IAP P
Sbjct: 202 GDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYATVSHIAPMVPE 261
Query: 189 KGGIVYSIVAKSGGAAYKFNSCTKSIQNW-DENNPPSVASLLVPSDFFGSYGQLNLEVRI 247
S+ + + K+IQ + P LL+PS + + + +E+ I
Sbjct: 262 VRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIPS-YMVNGDHMKMEISI 320
>sp|Q9FKD5|SINL9_ARATH Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis
thaliana GN=At5g37910 PE=3 SV=1
Length = 276
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH+ C CC +L NKCP+C LP+GHSRS AME VLESI + C N GC +
Sbjct: 49 IFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFF 108
Query: 92 YSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHK----HAAEEFVYDKVLRIT 147
Y K+ H K C ++CSCP + C++ GS+ +Y H++ H + F +
Sbjct: 109 YGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTNIFWNIKRFRCANFFTTS 168
Query: 148 LSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PCKGGIVYSIVAKSGGAAY 205
+ + ++ + + L + EP G ++V+ IAP P G Y + G
Sbjct: 169 MLISDKILIKRVHEKKLLLAVQCFREPCGVYVTVSFIAPSAPEVGEFSYQLSYNVDGHTV 228
Query: 206 KFNS------CTKSIQNWDEN 220
+ S C SI+ EN
Sbjct: 229 TYESPEVKRVCKVSIETPQEN 249
>sp|Q9C6H2|SINL3_ARATH E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana
GN=At1g66630 PE=2 SV=1
Length = 303
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 7/185 (3%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGHI C+ CC ++ KCP C L IG RS +EK++E++ V+C N +GC EK+
Sbjct: 60 IYQCDNGHIACSSCCKKVKYKCPYCSLRIGFFRSRILEKIVEAVVVSCPNAKYGCTEKIP 119
Query: 92 YSKKYD--HGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFV---YDKVLRI 146
Y + + H + C C CP C + G + +Y+H+ HK F Y+
Sbjct: 120 YDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFKCGEYNNAWLH 179
Query: 147 TLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PCKGGIVYSIVAKSGGAA 204
+ LQE ++G L ++ S E HG ++VNCIAP P G ++ ++G
Sbjct: 180 VTGEKLSFLVLQEYEDGPLVVVQCSMESHGICVTVNCIAPCAPGVGEFSCHLIYRNGSEK 239
Query: 205 YKFNS 209
F S
Sbjct: 240 ITFES 244
>sp|Q7XA77|SINL5_ARATH E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana
GN=At1g66660 PE=2 SV=2
Length = 328
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH+ C+ CC +L KC CR IG R AMEKV+E+ V C N HGCKE +
Sbjct: 97 IYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTT 156
Query: 92 YSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVY-------DKVL 144
Y + H K C RCSCP++ CN+V S++ + H E+ ++ ++
Sbjct: 157 YCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSHACSTAHVWGEDDIHFQLVIDRPRIF 216
Query: 145 RITLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIA 185
+ L ++F +EEK GDL ++ G ++VN IA
Sbjct: 217 NMNLGRKKTVVF-KEEKEGDLIVVQAFKGLEGVYVTVNRIA 256
>sp|Q9FKD6|SINL8_ARATH E3 ubiquitin-protein ligase SINA-like 8 OS=Arabidopsis thaliana
GN=At5g37900 PE=1 SV=2
Length = 263
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH+ C+ CC +L NKCP+C ME +LESI VTC N+ GC E
Sbjct: 46 IFQCENGHLACSSCCPKLRNKCPAC----------PMENILESILVTCPNDMFGCTESFL 95
Query: 92 YSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAA--------EEFVYDKV 143
Y KK H + C + CSCP C + G + +Y H++ H + Y
Sbjct: 96 YGKKSTHEEECIFSLCSCPSLDCEYSGRYEDLYDHYKLTHISNSYWTTNCFRSSIPYKAP 155
Query: 144 LRITLSVHHDLIFLQEEKNGDLFILNNSTEPHGYRISVNCIAP--PCKGGIVYSI 196
+ I+ + ++ + LF + E G ++V+CIAP P G Y I
Sbjct: 156 MLISDKIQITRVY----EKKILFAVQCFRESCGVYVTVSCIAPSAPEVGQFSYQI 206
>sp|Q8IUQ4|SIAH1_HUMAN E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1
SV=2
Length = 282
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + L + +C +GH+VC+ C +L CP+CR P+G R++AMEKV S+ C+
Sbjct: 45 FDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASS 103
Query: 85 GCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ + +++K DH + C C CP A+C + GS + + H +H+H +
Sbjct: 104 GCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL--MHQHKS------- 154
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 155 ---ITTLQGEDIVFLATDIN 171
>sp|Q8I147|SINA_DROWI E3 ubiquitin-protein ligase sina OS=Drosophila willistoni GN=sina
PE=3 SV=1
Length = 331
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVL 72
T++ C + F + L + +C +GH+VC C +L CP+CR P+ + R++AMEKV
Sbjct: 85 TSLFECPVCFD---YVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVA 140
Query: 73 ESIQVTCENEDHGCKEKMSYSKKYDHGKA--CHHARCSCPLAACNFVGSFNQIYQHFRGV 130
+++ C++ +GC + Y++K +H + C C CP A+C + G + + QH
Sbjct: 141 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 200
Query: 131 HKH----AAEEFVY-----------DKVLRITLSVHHDLIFLQEEKNGD 164
HK E+ V+ D V+ + HH ++ L++++ D
Sbjct: 201 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYD 249
>sp|P21461|SINA_DROME E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster GN=sina
PE=1 SV=2
Length = 314
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVL 72
T++ C + F + L + +C +GH+VC C +L CP+CR P+ + R++AMEKV
Sbjct: 68 TSLFECPVCFD---YVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVA 123
Query: 73 ESIQVTCENEDHGCKEKMSYSKKYDHGKA--CHHARCSCPLAACNFVGSFNQIYQHFRGV 130
+++ C++ +GC + Y++K +H + C C CP A+C + G + + QH
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 131 HKH----AAEEFVY-----------DKVLRITLSVHHDLIFLQEEKNGD 164
HK E+ V+ D V+ + HH ++ L++++ D
Sbjct: 184 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYD 232
>sp|P61093|SINA_DROER E3 ubiquitin-protein ligase sina OS=Drosophila erecta GN=sina PE=3
SV=1
Length = 314
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVL 72
T++ C + F + L + +C +GH+VC C +L CP+CR P+ + R++AMEKV
Sbjct: 68 TSLFECPVCFD---YVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEKVA 123
Query: 73 ESIQVTCENEDHGCKEKMSYSKKYDHGKA--CHHARCSCPLAACNFVGSFNQIYQHFRGV 130
+++ C++ +GC + Y++K +H + C C CP A+C + G + + QH
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 131 HKH----AAEEFVY-----------DKVLRITLSVHHDLIFLQEEKNGD 164
HK E+ V+ D V+ + HH ++ L++++ D
Sbjct: 184 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYD 232
>sp|P93748|SINA1_ARATH Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana
GN=SINAT1 PE=3 SV=1
Length = 305
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH +C+ C + + N CP+CR +G+ R +A+EKV ES++V C ++ GC++
Sbjct: 68 IHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFP 127
Query: 92 YSKKYDHGKACHHARCSCPLAA--CNFVGSFNQIYQHFRGVHK 132
Y K H + C SCP A C+ G + H + HK
Sbjct: 128 YYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHK 170
>sp|Q7ZVG6|SIAH1_DANRE E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2
Length = 282
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + L + +C +GH+VC+ C +L CP+CR P+G R++AMEKV S+ C+
Sbjct: 45 FDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASS 103
Query: 85 GCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ + ++ K +H + C C CP A+C + GS + + H +H+H +
Sbjct: 104 GCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL--LHQHKS------- 154
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 155 ---ITTLQGEDIVFLATDIN 171
>sp|P29304|SINA_DROVI E3 ubiquitin-protein ligase sina OS=Drosophila virilis GN=sina PE=3
SV=1
Length = 314
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVL 72
T++ C + F + L + +C +GH+VC C +L CP+CR P+ + R++AME+V
Sbjct: 68 TSLFECPVCFD---YVLPPILQCSSGHLVCVSCRSKL-TCCPTCRGPLANIRNLAMEEVA 123
Query: 73 ESIQVTCENEDHGCKEKMSYSKKYDHGKA--CHHARCSCPLAACNFVGSFNQIYQHFRGV 130
+++ C++ +GC + Y++K +H + C C CP A+C + G + + QH
Sbjct: 124 SNVKFPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMS 183
Query: 131 HKH----AAEEFVY-----------DKVLRITLSVHHDLIFLQEEKNGD 164
HK E+ V+ D V+ + HH ++ L++++ D
Sbjct: 184 HKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYD 232
>sp|Q920M9|SIAH1_RAT E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1
PE=1 SV=2
Length = 282
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + L + +C +GH+VC+ C +L CP+CR P+G R++AMEKV S+ C+
Sbjct: 45 FDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASS 103
Query: 85 GCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ + +++K +H + C C CP A+C + GS + + H +H+H +
Sbjct: 104 GCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL--MHQHKS------- 154
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 155 ---ITTLQGEDIVFLATDIN 171
>sp|P61092|SIA1A_MOUSE E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1
SV=1
Length = 282
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + L + +C +GH+VC+ C +L CP+CR P+G R++AMEKV S+ C+
Sbjct: 45 FDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASS 103
Query: 85 GCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ + +++K +H + C C CP A+C + GS + + H +H+H +
Sbjct: 104 GCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL--MHQHKS------- 154
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 155 ---ITTLQGEDIVFLATDIN 171
>sp|Q9STN8|SINA4_ARATH E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana
GN=SINAT4 PE=2 SV=1
Length = 327
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH +C+ C + + N+CP+CR +G R +A+EKV ES+++ C+ + GC E
Sbjct: 75 IHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFP 134
Query: 92 YSKKYDHGKACHHARCSCPLAA--CNFVGSFNQIYQHFRGVHK---HAAEEF 138
Y K H C+ SCP A C VG + H R HK HA F
Sbjct: 135 YYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTF 186
>sp|Q06985|SIA1B_MOUSE E3 ubiquitin-protein ligase SIAH1B OS=Mus musculus GN=Siah1b PE=2
SV=2
Length = 282
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + L + +C +GH+VC+ C +L CP+CR P+G R++A+EKV S+ C+
Sbjct: 45 FDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAVEKVANSVLFPCKYSAS 103
Query: 85 GCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ + ++KK +H + C C CP A+C + GS + + H +H+H +
Sbjct: 104 GCEITLPHTKKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHL--MHQHKS------- 154
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 155 ---ITTLQGEDIVFLATDIN 171
>sp|Q86MW9|SINA_SCHMA E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA
PE=1 SV=1
Length = 371
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 27 FTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGC 86
+ L + +C +GHIVC C +L + CP+CR + + R++AMEK+ S+ C+ GC
Sbjct: 132 YALPPIMQCQSGHIVCASCRSKL-SSCPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGC 190
Query: 87 KEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDKVL 144
E Y+ K +H AC + C CP A+C ++G Q+ H VH H +
Sbjct: 191 PETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQVMPHL--VHHHKS--------- 239
Query: 145 RITLSVHHDLIFLQEE 160
IT D++FL +
Sbjct: 240 -ITTLQGEDIVFLATD 254
>sp|Q9M2P4|SINA2_ARATH E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana
GN=SINAT2 PE=2 SV=1
Length = 308
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH +C+ C + + N CP+CR +G+ R +A+EKV ES++V C ++ GC +
Sbjct: 71 IHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFP 130
Query: 92 YSKKYDHGKACHHARCSCPLAA--CNFVGSFNQIYQHFRGVHK 132
Y K H + C +CP A C+ G + H + HK
Sbjct: 131 YYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHK 173
>sp|Q84JL3|SINA3_ARATH E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana
GN=SINAT3 PE=2 SV=1
Length = 326
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH +C+ C + N+CP+CR +G R +A+EKV ES+++ C++ GC E
Sbjct: 74 IHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFP 133
Query: 92 YSKKYDHGKACHHARCSCPLAA--CNFVGSFNQIYQHFRGVHK 132
Y K H C+ SCP A C+ G + H R HK
Sbjct: 134 YYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHK 176
>sp|Q7SYL3|SIAH2_DANRE E3 ubiquitin-protein ligase Siah2 OS=Danio rerio GN=siah2l PE=2
SV=2
Length = 331
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHS-RSIAMEKVLESIQVTCENED 83
F + L + +C GH+VCN+C + ++ CP+CR P+ S R++AMEKV ++ C+
Sbjct: 93 FDYVLPPILQCQAGHLVCNQC-RQKLSCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYSS 151
Query: 84 HGCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYD 141
GC + +S+K +H + C C CP A+C + GS ++ H HK
Sbjct: 152 AGCLLSLHHSEKPEHEEVCEFRPYTCPCPGASCKWQGSLEEVMPHLMHAHK--------- 202
Query: 142 KVLRITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 203 ---SITTLQGEDIVFLATDIN 220
>sp|Q9I8X5|SIAH2_XENLA E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2
SV=1
Length = 313
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHS-RSIAMEKV 71
T++ C + F + L + +C GH+VCN+C + ++ CP+CR + S R++AMEKV
Sbjct: 64 TSLFECPVCFD---YVLPPILQCQAGHLVCNQC-RQKLSCCPTCRASLTPSIRNLAMEKV 119
Query: 72 LESIQVTCENEDHGCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRG 129
++ C+ GC + +++K +H C + C CP A+C + GS + QH
Sbjct: 120 ASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTH 179
Query: 130 VHKHAAEEFVYDKVLRITLSVHHDLIFLQEEKN 162
HK IT D++FL + N
Sbjct: 180 SHK------------SITTLQGEDIVFLATDIN 200
>sp|Q9C6H4|SINL1_ARATH E3 ubiquitin-protein ligase SINA-like 1 OS=Arabidopsis thaliana
GN=At1g66610 PE=2 SV=1
Length = 366
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 82 EDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYD 141
+GC E SY + H K C A C CP CN+ G + +Y H+ HK F
Sbjct: 182 RQNGCTETFSYGNELVHEKKCSFALCYCPAPNCNYAGVYKDLYSHYAANHKKLWTRFSCG 241
Query: 142 KVLRITLSVHHDLIFLQEEKNGDLFILNNSTE-PHGYRISVNCIAP--PCKGGIVYSIVA 198
+ + + + LQ+ +G L +L E P G +VNCIAP P G Y +
Sbjct: 242 YSMHVCMDFESKSLVLQQYSDGPLVVLQCFKEPPQGLFWTVNCIAPSAPGVGKFSYELSY 301
Query: 199 KSGGAAYKFNS 209
+ G F S
Sbjct: 302 STAGNTLTFRS 312
>sp|Q8S3N1|SINA5_ARATH E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana
GN=SINAT5 PE=1 SV=2
Length = 309
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 32 VAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGCKEKMS 91
+ +C NGH +C+ C + N+CP+CR +G R +A+EKV ES+++ C+ + GC
Sbjct: 57 IHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFP 116
Query: 92 YSKKYDHGKACHHARCSCPLAA--CNFVGSFNQIYQHFRGVHK 132
Y K H C+ SCP A C VG + H R HK
Sbjct: 117 YYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHK 159
>sp|A8X679|SIAH1_CAEBR E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis briggsae
GN=siah-1 PE=3 SV=2
Length = 434
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 27 FTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGC 86
+ L +C +GH+VC+ C +L CP+CR P R++ +EK+ +++ C+ + GC
Sbjct: 177 YMLPPYMQCPSGHLVCSNCRPKL-QCCPTCRGPTPSVRNLGLEKIANTVRFPCKFSNSGC 235
Query: 87 KEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDKVL 144
+ K DH + C + C CP A+C + G+ + H + VHK
Sbjct: 236 PLNFHHIDKMDHEELCEYRPYSCPCPGASCKWQGALADVMDHLKKVHKS----------- 284
Query: 145 RITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 285 -ITTLQGEDIVFLATDIN 301
>sp|O43255|SIAH2_HUMAN E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1
SV=1
Length = 324
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHS-RSIAMEKV 71
T++ C + F + L + +C GH+VCN+C + ++ CP+CR + S R++AMEKV
Sbjct: 75 TSLFECPVCFD---YVLPPILQCQAGHLVCNQC-RQKLSCCPTCRGALTPSIRNLAMEKV 130
Query: 72 LESIQVTCENEDHGCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRG 129
++ C+ GC + +++K +H C + C CP A+C + GS + H
Sbjct: 131 ASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMH 190
Query: 130 VHKHAAEEFVYDKVLRITLSVHHDLIFLQEEKN 162
HK IT D++FL + N
Sbjct: 191 AHK------------SITTLQGEDIVFLATDIN 211
>sp|Q8T3Y0|SINAL_DROME Probable E3 ubiquitin-protein ligase sinah OS=Drosophila
melanogaster GN=sinah PE=1 SV=2
Length = 351
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 25 FIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDH 84
F + + + +C GH++C+ C +L CP CR+ + + RS+AMEKV + C++
Sbjct: 110 FGYIMPPIMQCPRGHLICSTCRSKL-TICPVCRVFMTNIRSLAMEKVASKLIFPCKHSHF 168
Query: 85 GCKEKMSYSKKYDHGK--ACHHARCSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDK 142
GC+ ++SY++K H + C C P C++ G +YQH H++
Sbjct: 169 GCRARLSYAEKTKHEEDCECRPYFCPYPDDKCSWQGPLRDVYQHLMSSHENV-------- 220
Query: 143 VLRITLSVHHDLIFLQEEKN 162
IT+ +D+IFL N
Sbjct: 221 ---ITME-GNDIIFLATNVN 236
>sp|Q8R4T2|SIAH2_RAT E3 ubiquitin-protein ligase SIAH2 OS=Rattus norvegicus GN=Siah2
PE=1 SV=2
Length = 325
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHS-RSIAMEKV 71
T++ C + F + L + +C GH+VCN+C + ++ CP+CR + S R++AMEKV
Sbjct: 76 TSLFECPVCFD---YVLPPILQCQAGHLVCNQC-RQKLSCCPTCRGALTPSIRNLAMEKV 131
Query: 72 LESIQVTCENEDHGCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRG 129
++ C+ GC + +++K +H C + C CP A+C + GS + H
Sbjct: 132 ASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMH 191
Query: 130 VHKHAAEEFVYDKVLRITLSVHHDLIFLQEEKN 162
HK IT D++FL + N
Sbjct: 192 AHK------------SITTLQGEDIVFLATDIN 212
>sp|Q06986|SIAH2_MOUSE E3 ubiquitin-protein ligase SIAH2 OS=Mus musculus GN=Siah2 PE=1
SV=2
Length = 325
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHS-RSIAMEKV 71
T++ C + F + L + +C GH+VCN+C + ++ CP+CR + S R++AMEKV
Sbjct: 76 TSLFECPVCFD---YVLPPILQCQAGHLVCNQC-RQKLSCCPTCRGALTPSIRNLAMEKV 131
Query: 72 LESIQVTCENEDHGCKEKMSYSKKYDHGKACHHA--RCSCPLAACNFVGSFNQIYQHFRG 129
++ C+ GC + +++K +H C + C CP A+C + GS + H
Sbjct: 132 ASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMH 191
Query: 130 VHKHAAEEFVYDKVLRITLSVHHDLIFLQEEKN 162
HK IT D++FL + N
Sbjct: 192 AHK------------SITTLQGEDIVFLATDIN 212
>sp|Q965X6|SIAH1_CAEEL E3 ubiquitin-protein ligase siah-1 OS=Caenorhabditis elegans
GN=siah-1 PE=1 SV=3
Length = 419
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 27 FTLLSVAECGNGHIVCNRCCIELMNKCPSCRLPIGHSRSIAMEKVLESIQVTCENEDHGC 86
+ L +C +GH+VC+ C +L CP+CR P R++ +EK+ +++ C+ GC
Sbjct: 162 YMLPPYMQCSSGHLVCSNCRPKLQ-CCPTCRGPTPSVRNLGLEKIANTVRFPCKFSTSGC 220
Query: 87 KEKMSYSKKYDHGKACHHAR--CSCPLAACNFVGSFNQIYQHFRGVHKHAAEEFVYDKVL 144
++ K +H + C C CP A+C + G + + +H + +HK
Sbjct: 221 PLNFHHADKTEHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHK------------ 268
Query: 145 RITLSVHHDLIFLQEEKN 162
IT D++FL + N
Sbjct: 269 SITTLQGEDIVFLATDIN 286
>sp|Q557K0|Y3509_DICDI TNF receptor-associated factor family protein
DDB_G0273433/DDB_G0273509 OS=Dictyostelium discoideum
GN=DDB_G0273433 PE=3 SV=1
Length = 450
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 23/136 (16%)
Query: 18 CFISFSSFIFTLLS--VAECGNGHIVCNRCC---IELMNKCPSCR---LPIGHSRSIAME 69
CF S F LS V +C NGHI C+ C + + +CPSC+ LP SR+I +E
Sbjct: 29 CFNSVIDFKKETLSFDVLQCRNGHISCHECWNRQLSIKQECPSCKVKTLPSELSRNIFLE 88
Query: 70 KVLESIQVTCENE-------------DHGCKEKMSYSKKYDHGKACHHARCSCPLAA--C 114
+++V C N+ ++GC E + H K C + CP + C
Sbjct: 89 NAFRALKVICPNKFKESKFQGEAVHCENGCPEILKVELLEHHLKECQYQFIKCPNNSNKC 148
Query: 115 NFVGSFNQIYQHFRGV 130
++ NQI H + V
Sbjct: 149 KYIIRKNQIEHHNQSV 164
>sp|Q86L54|Y2829_DICDI TNF receptor-associated factor family protein DDB_G0272829
OS=Dictyostelium discoideum GN=DDB_G0272829 PE=3 SV=1
Length = 530
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 23 SSFIFTLLSVAECGNGHIVCNRC---CIELMNKCPSCRLPIGHSRSIA-----MEKVLES 74
SS I + +C NGH C C +E+ ++CP+CR+ I +++ ++ + ES
Sbjct: 44 SSLIPNRMKALQCINGHCFCLTCWESILEIKSECPTCRIQIQSMNTLSNNLFIIKSISES 103
Query: 75 IQVTC--------ENEDHGCKEKMSYSKKYDHGKACHHARCSCPL-AACNFVGSFNQIYQ 125
I++ C N +GCKE ++ + H C C + CN + FN+ +
Sbjct: 104 IKIHCPNYLNFDNSNNFNGCKEIITIDEIDRHESKCEFRFIKCSINNQCNEIIRFNERDK 163
Query: 126 H 126
H
Sbjct: 164 H 164
>sp|Q9CQ29|RN151_MOUSE RING finger protein 151 OS=Mus musculus GN=Rnf151 PE=1 SV=1
Length = 239
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 9/97 (9%)
Query: 39 HIVCNRCCIELM---NKCPSCRLPIGHSRSIAMEKVLESI---QVTCENEDHGCKEKMSY 92
HI C +C + N CP CR + + + + K+ ++I QV C+N GC +
Sbjct: 37 HIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEVNKLRKTIGRLQVKCKNAAAGCLDTHPL 96
Query: 93 SKKYDHGKACHHARCSCPLAACN---FVGSFNQIYQH 126
+ + +H +C +CP C G ++ QH
Sbjct: 97 AHRKEHQDSCPFELMACPNEGCTVQVLRGVLDEHRQH 133
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 38.9 bits (89), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 29/124 (23%)
Query: 32 VAECGNGHIVCNRCCIE-LMNK--CPSCRLPIGHSRSIAMEKVLES----IQVTCEN--- 81
V +C +GH+ C C + L+NK C CR P+ ++ + +E+ +V C N
Sbjct: 39 VFQCRDGHLACKSCWSDSLLNKKECMICRTPVNSMNELSRNRFIENEFLKKKVYCPNSFF 98
Query: 82 -------------------EDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQ 122
E +GCKE ++ H C CP C+ + Q
Sbjct: 99 FIENVNVDDSSMNEALIRDESNGCKEIITVEALEKHQVECQFRFEKCPFTGCDKILRLKQ 158
Query: 123 IYQH 126
I +H
Sbjct: 159 IAEH 162
>sp|Q2TBT8|RN151_BOVIN RING finger protein 151 OS=Bos taurus GN=RNF151 PE=2 SV=1
Length = 240
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 39 HIVCNRCCIELMNK---CPSCRLPIGHSRSI---AMEKVLESIQVTCENEDHGCKEKMSY 92
HI C +C + + + CP CR + H + + ++K++ ++V C N + GC+
Sbjct: 37 HIFCKKCILRWLARQKTCPCCRKEVRHRKMVHVNKLQKIIGRLEVKCRNAEAGCQVTCPL 96
Query: 93 SKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
+ + H +C CP C + +H
Sbjct: 97 AHRKGHQDSCPFELMVCPNEGCMLRVPRGALDEH 130
>sp|Q7YR89|CYHR1_BOVIN Cysteine and histidine-rich protein 1 OS=Bos taurus GN=CYHR1 PE=2
SV=2
Length = 311
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 30 LSVAECGNGHIVCNRCCIELMNK---------CPSCRLPIGHS---RSIAMEKVLESIQV 77
LS A+C NGH++C C I L+ CP+CR I S R++A+EK + +
Sbjct: 27 LSTAQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPS 86
Query: 78 TCE----NEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
C E+ + D C + R CP + G F+++ H
Sbjct: 87 ECGFCLCQFPRSILERHQKEECQDRVTQCKYKRIGCP-----WHGPFHELTVH 134
>sp|Q2KHN1|RN151_HUMAN RING finger protein 151 OS=Homo sapiens GN=RNF151 PE=2 SV=1
Length = 245
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Query: 39 HIVCNRCCIELMNK---CPSCRLPIGHSRSIAMEKVLESI---QVTCENEDHGCKEKMSY 92
HI C +C + + + CP CR + + + M K+ ++I +V C+N D GC
Sbjct: 37 HIFCKKCILRWLARQKTCPCCRKEVKRKKVVHMNKLRKTIGRLEVKCKNADAGCIVTCPL 96
Query: 93 SKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
+ + H +C +CP C + +H
Sbjct: 97 AHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEH 130
>sp|Q2TAD9|CYR1B_XENLA Cysteine and histidine-rich protein 1-B OS=Xenopus laevis
GN=cyhr1-b PE=2 SV=2
Length = 365
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 31 SVAECGNGHIVCNRCCIELMNK---------CPSCRLPIGHS---RSIAMEKVLESIQVT 78
SV +C NGH++C C I L+ CP+CR I S R++A+EK + +
Sbjct: 82 SVYQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAISELPSD 141
Query: 79 C----ENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
C + E+ + D C + R CP + G ++++ H
Sbjct: 142 CGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCP-----WQGPYHELTVH 188
>sp|Q9QXA1|CYHR1_MOUSE Cysteine and histidine-rich protein 1 OS=Mus musculus GN=Cyhr1 PE=1
SV=1
Length = 311
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 21/130 (16%)
Query: 13 TTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNK---------CPSCRLPIGHS 63
+TVL + + +S +C NGH++C C I L+ CP+CR I S
Sbjct: 10 STVLSHLVLAGVSLHAAVSSVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKS 69
Query: 64 ---RSIAMEKVLESIQVTC----ENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNF 116
R++A+EK + + C E+ + D C + R CP +
Sbjct: 70 LCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCP-----W 124
Query: 117 VGSFNQIYQH 126
G F+++ H
Sbjct: 125 HGPFHELTVH 134
>sp|Q5BK76|CYHR1_RAT Cysteine and histidine-rich protein 1 OS=Rattus norvegicus GN=Cyhr1
PE=2 SV=2
Length = 311
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 31/135 (22%)
Query: 8 HFVLCTTVLHCFISFSSFIFTLLSVAECGNGHIVCNRCCIELMNK---------CPSCRL 58
H VL LH +S +C NGH++C C I L+ CP+CR
Sbjct: 15 HLVLAGVSLHAAVS----------SVQCTNGHLMCAGCFIHLLADARLKEEQATCPNCRC 64
Query: 59 PIGHS---RSIAMEKVLESIQVTC----ENEDHGCKEKMSYSKKYDHGKACHHARCSCPL 111
I S R++A+EK + + C E+ + D C + R CP
Sbjct: 65 EISKSLCCRNLAVEKAVSELPSECGFCLRQFPRSLLERHQKEECQDRVTQCKYKRIGCP- 123
Query: 112 AACNFVGSFNQIYQH 126
+ G F+++ H
Sbjct: 124 ----WHGPFHELTVH 134
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 24/124 (19%)
Query: 30 LSVAECGNGHIVCNRCCI-ELMNK---CPSCRLPIGH---SRSIAMEKVLESIQVTCE-- 80
+ V +C +GH +C+ C ++ NK CP CR + SR++ +E + +V C+
Sbjct: 34 IQVNQCPHGHCLCSDCWTKQIENKKKECPICRAKVKLEFLSRNLFLESEFKKKKVYCKYQ 93
Query: 81 ------------NEDHGCKEKMSYSKKYDHGKACHHARCSCPLA-ACNFVGSF--NQIYQ 125
+E++GCK+ + + H K C +A +CP C F NQ+ +
Sbjct: 94 YKEEKEDGKIIKDEENGCKDIIRIEEMETHFKNCQYAFINCPNGDECKINSRFRKNQLEE 153
Query: 126 HFRG 129
H +
Sbjct: 154 HNKS 157
>sp|Q6GNX1|CYR1A_XENLA Cysteine and histidine-rich protein 1-A OS=Xenopus laevis
GN=cyhr1-a PE=2 SV=2
Length = 365
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 31 SVAECGNGHIVCNRCCIELMNK---------CPSCRLPIGHS---RSIAMEKVLESIQVT 78
SV +C NGH++C C I L+ CP+CR I S R++A+EK + +
Sbjct: 82 SVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSD 141
Query: 79 C----ENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
C + E+ + D C + R CP + G ++++ H
Sbjct: 142 CGFCLKQFPRSLLERHKKEECQDRVTQCKYKRIGCP-----WEGPYHELTVH 188
>sp|Q08CH8|CYHR1_DANRE Cysteine and histidine-rich protein 1 OS=Danio rerio GN=cyhr1 PE=2
SV=1
Length = 375
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 31 SVAECGNGHIVCNRCCIELMNK---------CPSCRLPIGHS---RSIAMEKVLESIQVT 78
SV +C NGH++C C I L+ CP+CR I S R++A+EK + +
Sbjct: 92 SVYQCTNGHLMCAGCFIHLLADSRLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSE 151
Query: 79 C----ENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
C + ++ + D C + R CP + G F+++ H
Sbjct: 152 CSYCLKQFPRSGLDRHQTEECQDRVTQCKYKRIGCP-----WQGPFHELSAH 198
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 35.4 bits (80), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 22/141 (15%)
Query: 34 ECGNGHIVCNRC---CIELMNKCPSCRLPIGH----SRSIAMEKVLESIQVTCEN----- 81
+C GH+ C C +E +C +CR + S++I ++K + ++ C N
Sbjct: 50 QCKEGHVHCRLCWMKSLESKKECMTCRTRVNSVDSLSKNIYLQKEFRNKKIFCPNLFRIL 109
Query: 82 --------EDHGCKEKMSYSKKYDHGKACHHARCSCP-LAACNFVGSFNQIYQHFRGVHK 132
E GCKE + + H K C CP C NQ+ H K
Sbjct: 110 NSGKIEIDEKFGCKEILKVDELEGHIKECQFQFIECPNDKECKTRLRKNQLKDHAEKCKK 169
Query: 133 HAAE-EFVYDKVLRITLSVHH 152
+E EF +K L I S H
Sbjct: 170 LKSECEFCGEKGLVIDDSKVH 190
>sp|Q6ZMK1|CYHR1_HUMAN Cysteine and histidine-rich protein 1 OS=Homo sapiens GN=CYHR1 PE=2
SV=2
Length = 362
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 21/108 (19%)
Query: 35 CGNGHIVCNRCCIELMNK---------CPSCRLPIGHS---RSIAMEKVLESIQVTC--- 79
C NGH++C C I L+ CP+CR I S R++A+EK + + C
Sbjct: 83 CTNGHLMCAGCFIHLLADARLKEEQATCPNCRCEISKSLCCRNLAVEKAVSELPSECGFC 142
Query: 80 -ENEDHGCKEKMSYSKKYDHGKACHHARCSCPLAACNFVGSFNQIYQH 126
E+ + D C + R CP + G F+++ H
Sbjct: 143 LRQFPRSLLERHQKEECQDRVTQCKYKRIGCP-----WHGPFHELTVH 185
>sp|Q55GA8|Y7744_DICDI TNF receptor-associated factor family protein DDB_G0267744
OS=Dictyostelium discoideum GN=DDB_G0267744 PE=3 SV=1
Length = 429
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 30 LSVAECGNGHIVCNRC---CIELMNKCPSCRLPIGHSRSIA----MEKVLESIQVTCEN- 81
+ + +C GH C C IEL +C +CR I S++ +EK + + + C N
Sbjct: 30 VDIYQCVEGHFACKNCFLKMIELKKQCMTCRCEIKSIESLSKNRYLEKEVRKLNIYCPNS 89
Query: 82 ---------EDHGCKEKMSYSKKYDHGKACHHARCSCP 110
+++ CK+ ++ H K C CP
Sbjct: 90 FSDLKNSIKDENACKDIITIEGLETHLKNCKFTLKECP 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,603,355
Number of Sequences: 539616
Number of extensions: 3823548
Number of successful extensions: 10526
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 10395
Number of HSP's gapped (non-prelim): 127
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)