BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048314
(274 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 18/178 (10%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-- 171
W +R RIAL A+G+ YLHD C+P I+H D+K NIL+DE + A + DFGLAKL+ K
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 172 ----------GCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEI-DASKPEEIILT 220
G +APE S K DV+GYG++LLE I ++ + ++++L
Sbjct: 198 HVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
Query: 221 NWVYKCFINRELNKLV----RGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+WV ++L LV +G D++ +E L++V L C Q P RP M VV ML
Sbjct: 258 DWVKGLLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 18/178 (10%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-- 171
W +R RIAL A+G+ YLHD C+P I+H D+K NIL+DE + A + DFGLAKL+ K
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 172 ----------GCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEI-DASKPEEIILT 220
G +APE S K DV+GYG++LLE I ++ + ++++L
Sbjct: 190 HVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
Query: 221 NWVYKCFINRELNKLV----RGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+WV ++L LV +G D++ +E L++V L C Q P RP M VV ML
Sbjct: 250 DWVKGLLKEKKLEALVDVDLQGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 22/175 (12%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD--- 170
W QR+ I + A+G+ YLH I+H D+K NIL+DE + KI+DFG++K ++
Sbjct: 138 WEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQ 194
Query: 171 -------KGCMA---PECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII-L 219
KG + PE + + ++ K+DVY +G+VL E +C I S P E++ L
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA--RSAIVQSLPREMVNL 252
Query: 220 TNWVYKCFINRELNKLVRGTEVDKKNLENLVKVG---LWCVQDEPALRPSMKCVV 271
W + N +L ++V DK E+L K G + C+ RPSM V+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 22/175 (12%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD--- 170
W QR+ I + A+G+ YLH I+H D+K NIL+DE + KI+DFG++K ++
Sbjct: 138 WEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQ 194
Query: 171 -------KGCMA---PECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII-L 219
KG + PE + + ++ K+DVY +G+VL E +C I S P E++ L
Sbjct: 195 THLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA--RSAIVQSLPREMVNL 252
Query: 220 TNWVYKCFINRELNKLVRGTEVDKKNLENLVKVG---LWCVQDEPALRPSMKCVV 271
W + N +L ++V DK E+L K G + C+ RPSM V+
Sbjct: 253 AEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 33/182 (18%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-------- 165
W+ R +IA A GI +LH E +H DIK NIL+DE +TAKISDFGLA
Sbjct: 132 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 166 -----KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
+++ MAPE R I+ K+D+Y +G+VLLE I +D + +++L
Sbjct: 189 TVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP--AVDEHREPQLLLD 245
Query: 221 NWVYKC--------FINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVM 272
+I++++N + D ++E + V C+ ++ RP +K V
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 273 ML 274
+L
Sbjct: 300 LL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 33/182 (18%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-------- 165
W+ R +IA A GI +LH E +H DIK NIL+DE +TAKISDFGLA
Sbjct: 132 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 166 -----KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
+++ MAPE R I+ K+D+Y +G+VLLE I +D + +++L
Sbjct: 189 TVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP--AVDEHREPQLLLD 245
Query: 221 NWVYKC--------FINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVM 272
+I++++N + D ++E + V C+ ++ RP +K V
Sbjct: 246 IKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 273 ML 274
+L
Sbjct: 300 LL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 33/182 (18%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-------- 165
W+ R +IA A GI +LH E +H DIK NIL+DE +TAKISDFGLA
Sbjct: 126 WHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 166 -----KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
+++ MAPE R I+ K+D+Y +G+VLLE I +D + +++L
Sbjct: 183 XVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP--AVDEHREPQLLLD 239
Query: 221 NWVYKC--------FINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVM 272
+I++++N + D ++E + V C+ ++ RP +K V
Sbjct: 240 IKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 273 ML 274
+L
Sbjct: 294 LL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 33/182 (18%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-------- 165
W+ R +IA A GI +LH E +H DIK NIL+DE +TAKISDFGLA
Sbjct: 123 WHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 166 -----KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
+++ APE R I+ K+D+Y +G+VLLE I +D + +++L
Sbjct: 180 XVXXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIITGLP--AVDEHREPQLLLD 236
Query: 221 NWVYKC--------FINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVM 272
+I+++ N + D ++E V C+ ++ RP +K V
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXN------DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
Query: 273 ML 274
+L
Sbjct: 291 LL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 37/176 (21%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL-----LSD 170
+R+ +A DVAKG+ YLH+ PPI+H ++K N+L+D+ +T K+ DFGL++L LS
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196
Query: 171 KGC------MAPECYKRTPISVKADVYGYGIVLLETICC---WENMEIDASKPEEIILTN 221
K MAPE + P + K+DVY +G++L E W N+ P +++
Sbjct: 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-----NPAQVVAAV 251
Query: 222 WVYKCF---INRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+KC I R LN V + G W +EP RPS ++ +L
Sbjct: 252 G-FKCKRLEIPRNLNPQVAA-----------IIEGCWT--NEPWKRPSFATIMDLL 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 37/176 (21%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL-----LSD 170
+R+ +A DVAKG+ YLH+ PPI+H D+K N+L+D+ +T K+ DFGL++L L
Sbjct: 138 RRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS 196
Query: 171 KGC------MAPECYKRTPISVKADVYGYGIVLLETICC---WENMEIDASKPEEIILTN 221
K MAPE + P + K+DVY +G++L E W N+ P +++
Sbjct: 197 KXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-----NPAQVVAAV 251
Query: 222 WVYKCF---INRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+KC I R LN V + G W +EP RPS ++ +L
Sbjct: 252 G-FKCKRLEIPRNLNPQVAA-----------IIEGCWT--NEPWKRPSFATIMDLL 293
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 19/103 (18%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC- 173
Q + IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 133 QLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 174 -----------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + P S ++DVY YGIVL E +
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 134 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 190
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 191
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 109 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 112 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 168
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 169 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 163
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + + P S ++DVY +GIVL E +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------ 165
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA
Sbjct: 127 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 166 -KLLSDKGCMAPECYK---RTPISVKADVYGYGIVLLETIC 202
+L MAPE + + P S ++DVY +GIVL E +
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------ 165
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA
Sbjct: 135 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
Query: 166 -KLLSDKGCMAPECYK---RTPISVKADVYGYGIVLLETIC 202
+L MAPE + + P S ++DVY +GIVL E +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------ 165
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA
Sbjct: 107 IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
Query: 166 -KLLSDKGCMAPECYK---RTPISVKADVYGYGIVLLETIC 202
+L MAPE + + P S ++DVY +GIVL E +
Sbjct: 164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-KGC--- 173
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA + S G
Sbjct: 111 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF 167
Query: 174 ---------MAPECYK---RTPISVKADVYGYGIVLLETIC 202
MAPE + P S ++DVY +GIVL E +
Sbjct: 168 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 41/185 (22%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +RNP + L VA+G+ YL E +H D+ +N ++DE +T K++DFGLA+
Sbjct: 116 SPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
Query: 167 LLSDKGCMAPECYK--RTPI-------------SVKADVYGYGIVLLETICCWENMEIDA 211
+ D+ + + ++ R P+ + K+DV+ +G++L WE + A
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL------WELLTRGA 226
Query: 212 SKPEEII---LTNWVYKCFINRELNKLVRGTEVDKKNL--ENLVKVGLWCVQDEPALRPS 266
I LT++ L +G + + ++L +V C + +PA+RP+
Sbjct: 227 PPYRHIDPFDLTHF------------LAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPT 274
Query: 267 MKCVV 271
+ +V
Sbjct: 275 FRVLV 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------ 165
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA
Sbjct: 123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 166 -KLLSDKGCMAPECYK---RTPISVKADVYGYGIVLLETIC 202
+L MAPE + P S ++DVY +GIVL E +
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------ 165
+ IA A+G+ YLH + I+H D+K NI + E T KI DFGLA
Sbjct: 123 IDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
Query: 166 -KLLSDKGCMAPECYK---RTPISVKADVYGYGIVLLETIC 202
+L MAPE + P S ++DVY +GIVL E +
Sbjct: 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 102 YIIFCSAERNPYWNQRVRIA--LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA-K 158
Y + AE PY+ ++ L ++G+ YLH ++H D+KP N+L+ T K
Sbjct: 88 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 159 ISDFGLA-----KLLSDKGC---MAPECYKRTPISVKADVYGYGIVLLETI 201
I DFG A + ++KG MAPE ++ + S K DV+ +GI+L E I
Sbjct: 148 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 11/111 (9%)
Query: 102 YIIFCSAERNPYWNQRVRIA--LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA-K 158
Y + AE PY+ ++ L ++G+ YLH ++H D+KP N+L+ T K
Sbjct: 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 159 ISDFGLA-----KLLSDKGC---MAPECYKRTPISVKADVYGYGIVLLETI 201
I DFG A + ++KG MAPE ++ + S K DV+ +GI+L E I
Sbjct: 147 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 17/98 (17%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFW--------TAKISDFGLAK------ 166
A+ +A+G+ YLHDE PI+H D+K NIL+ + KI+DFGLA+
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT 170
Query: 167 LLSDKGC---MAPECYKRTPISVKADVYGYGIVLLETI 201
+S G MAPE + + S +DV+ YG++L E +
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 28/113 (24%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC 173
W+QRV A D+A G+ YLH I+H D+ N L+ E ++DFGLA+L+ D+
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 174 -------------------------MAPECYKRTPISVKADVYGYGIVLLETI 201
MAPE K DV+ +GIVL E I
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q I ++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 125 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 181
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE K++ KAD++ GI +E
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 216
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q I ++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 105 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE K++ KAD++ GI +E
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q I ++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 120 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 176
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE K++ KAD++ GI +E
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q I ++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 105 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE K++ KAD++ GI +E
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 196
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
I ++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV 177
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE K++ KAD++ GI +E
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIE 208
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+ GI + HD I+H DIKPQNIL+D T KI DFG+AK LS+
Sbjct: 120 ILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 174 --MAPECYKRTPISVKADVYGYGIVLLETIC 202
+PE K D+Y GIVL E +
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC--------- 173
++ KG+ YLH E + +H DIK N+L+ E K++DFG+A L+D
Sbjct: 128 EILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 184
Query: 174 --MAPECYKRTPISVKADVYGYGIVLLE 199
MAPE +++ KAD++ GI +E
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIE 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 127 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 183
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 184 DKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 17/108 (15%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT-----AKISDFGLAK-- 166
W+ ++R+ LD+A GI Y+ ++ PPI+H D++ NI + AK++DFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179
Query: 167 ------LLSDKGCMAPECY--KRTPISVKADVYGYGIVLLETICCWEN 206
LL + MAPE + + KAD Y + ++L TI E
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-TILTGEG 226
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 147 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 203
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLE 199
DK G MA E + + K+DV+ +G++L E
Sbjct: 204 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 248
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 128 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLE 199
DK G MA E + + K+DV+ +G++L E
Sbjct: 185 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 127 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 183
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLE 199
DK G MA E + + K+DV+ +G++L E
Sbjct: 184 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 128 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLE 199
DK G MA E + + K+DV+ +G++L E
Sbjct: 185 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 146 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 202
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK G MA E + + K+DV+ +G++L E +
Sbjct: 203 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 126 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 182
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK G MA E + + K+DV+ +G++L E +
Sbjct: 183 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 120 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 176
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK G MA E + + K+DV+ +G++L E +
Sbjct: 177 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 125 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181
Query: 170 DK---------GC------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK G MA E + + K+DV+ +G++L E +
Sbjct: 182 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 18/107 (16%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ YL +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 123 HNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK MA E + + K+DV+ +G++L E +
Sbjct: 180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 110 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 166
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 167 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V +G+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 175
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ MAPE + T SV++D++ G+ L+E
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVE 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 115 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 114 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 171 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 104 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 161 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 111 NKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 167
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 168 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 115 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 171
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 172 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 117 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 174 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT 165
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 118 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 174
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 175 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 119 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 176 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ + +H D++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 109 NKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFW---TAKISDFGLAK----- 166
N +R+ + +G+ YLH + I+H D+KPQNIL+ + KI DFG+++
Sbjct: 131 NDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187
Query: 167 -----LLSDKGCMAPECYKRTPISVKADVYGYGIV 196
++ +APE PI+ D++ GI+
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 27/112 (24%)
Query: 114 WNQRVRIALDVAKGILYLH-------DECEPPILHCDIKPQNILMDEFWTAKISDFGLA- 165
WN+ IA +A+G+ YLH D +P I H DIK +N+L+ TA I+DFGLA
Sbjct: 120 WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179
Query: 166 KLLSDKGC------------MAPEC------YKRTPISVKADVYGYGIVLLE 199
K + K MAPE ++R ++ D+Y G+VL E
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWE 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 128 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 185 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 227
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 129 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 185
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 186 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 126 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 182
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 183 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 407
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 408 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 460
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 461 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 511
Query: 268 KCVVMML 274
+ + L
Sbjct: 512 EYLQAFL 518
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 128 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 184
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 185 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 229
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 133 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 189
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 190 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 234
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 127 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 184
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 187 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 110 RNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
NP + L VAKG+ +L +H D+ +N ++DE +T K++DFGLA+ +
Sbjct: 129 HNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDML 185
Query: 170 DKGC---------------MAPECYKRTPISVKADVYGYGIVLLE 199
DK MA E + + K+DV+ +G++L E
Sbjct: 186 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 230
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 377
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 378 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
Query: 268 KCVVMML 274
+ + L
Sbjct: 429 EYLQAFL 435
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 377
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 378 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
Query: 268 KCVVMML 274
+ + L
Sbjct: 429 EYLQAFL 435
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVG 168
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 198
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 325 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 377
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 378 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 428
Query: 268 KCVVMML 274
+ + L
Sbjct: 429 EYLQAFL 435
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 192
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 11/90 (12%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-------- 170
++++ V KG+ YL ++ + I+H D+KP NIL++ K+ DFG++ L D
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 165
Query: 171 -KGCMAPECYKRTPISVKADVYGYGIVLLE 199
+ M+PE + T SV++D++ G+ L+E
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK------- 171
+IA+ + K + +LH + ++H D+KP N+L++ K+ DFG++ L D
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 172 GC---MAPEC----YKRTPISVKADVYGYGIVLLE 199
GC MAPE + SVK+D++ GI ++E
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT-----AKISDFG----- 163
W+ ++R+ LD+A GI Y+ ++ PPI+H D++ NI + AK++DFG
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS 179
Query: 164 ---LAKLLSDKGCMAPECY--KRTPISVKADVYGYGIVLLETICCWEN 206
++ LL + MAPE + + KAD Y + ++L TI E
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-TILTGEG 226
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 98 WDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA 157
+DL + + +R+ YW R+ + + + Y+H + I+H D+KP NI +DE
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNV 155
Query: 158 KISDFGLAK 166
KI DFGLAK
Sbjct: 156 KIGDFGLAK 164
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 148
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 149 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 201
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 202 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 252
Query: 268 KCVVMML 274
+ + L
Sbjct: 253 EYLQAFL 259
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 98 WDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA 157
+DL + + +R+ YW R+ + + + Y+H + I+H D+KP NI +DE
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNV 155
Query: 158 KISDFGLAK 166
KI DFGLAK
Sbjct: 156 KIGDFGLAK 164
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD---- 170
N+ + +A +A+G+ ++ E +H +++ NIL+ + + KI+DFGLA+L+ D
Sbjct: 105 NKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
Query: 171 --KGC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+G APE ++K+DV+ +GI+L E +
Sbjct: 162 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK----------- 171
++A G+ +LH I++ D+KP+NIL+DE K++DFGL+K D
Sbjct: 138 ELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTV 194
Query: 172 GCMAPECYKRTPISVKADVYGYGIVLLETICC 203
MAPE R S AD + YG+++ E +
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 95 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 151
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 152 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 204
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 205 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 255
Query: 268 KCVVMML 274
+ + L
Sbjct: 256 EYLQAFL 262
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 107 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 163
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS---DKGCM 174
++ +LDV + + YL +H D+ +N+L+ E AK+SDFGL K S D G +
Sbjct: 111 LKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 167
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE + S K+DV+ +GI+L E
Sbjct: 168 PVKWTAPEALREAAFSTKSDVWSFGILLWE 197
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 99 DLAYIIFCSAERNPYWNQ--RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT 156
D+ Y I+ E NP + + + + G+ +LH I++ D+KP+N+L+D+
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGN 327
Query: 157 AKISDFGLAKLL-----------SDKGCMAPECYKRTPISVKADVYGYGIVLLETICC 203
+ISD GLA L G MAPE D + G+ L E I
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 99 DLAYIIFCSAERNPYWNQ--RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT 156
D+ Y I+ E NP + + + + G+ +LH I++ D+KP+N+L+D+
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGN 327
Query: 157 AKISDFGLAKLL-----------SDKGCMAPECYKRTPISVKADVYGYGIVLLETICC 203
+ISD GLA L G MAPE D + G+ L E I
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
Query: 99 DLAYIIFCSAERNPYWNQ--RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT 156
D+ Y I+ E NP + + + + G+ +LH I++ D+KP+N+L+D+
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGN 327
Query: 157 AKISDFGLAKLL-----------SDKGCMAPECYKRTPISVKADVYGYGIVLLETICC 203
+ISD GLA L G MAPE D + G+ L E I
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 114 WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT-----AKISDFGLAK-- 166
W+ ++R+ LD+A GI Y+ ++ PPI+H D++ NI + AK++DF L++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS 179
Query: 167 ------LLSDKGCMAPECY--KRTPISVKADVYGYGIVLLETICCWEN 206
LL + MAPE + + KAD Y + ++L TI E
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILY-TILTGEG 226
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL--------LSD 170
R + G++YLH I H DIKP+N+L+DE KISDFGLA + L +
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 171 KGC-----MAPECYKRTPISVK-ADVYGYGIVL 197
K C +APE KR + DV+ GIVL
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK------- 171
+IA+ + K + +LH + ++H D+KP N+L++ K+ DFG++ L D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 172 GC---MAPEC----YKRTPISVKADVYGYGIVLLE 199
GC MAPE + SVK+D++ GI ++E
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 205
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS---DKGCM 174
++ +LDV + + YL +H D+ +N+L+ E AK+SDFGL K S D G +
Sbjct: 292 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 348
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE + S K+DV+ +GI+L E
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWE 378
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS---DKGCM 174
++ +LDV + + YL +H D+ +N+L+ E AK+SDFGL K S D G +
Sbjct: 120 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 176
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE + S K+DV+ +GI+L E
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWE 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 99 DLAYIIFCSAERNPYWNQ--RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT 156
D+ Y I+ E NP + + + + G+ +LH + I++ D+KP+N+L+D+
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGN 327
Query: 157 AKISDFGLAKLL-----------SDKGCMAPECYKRTPISVKADVYGYGIVLLETICC 203
+ISD GLA L G MAPE D + G+ L E I
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS---DKGCM 174
++ +LDV + + YL +H D+ +N+L+ E AK+SDFGL K S D G +
Sbjct: 105 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE + S K+DV+ +GI+L E
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWE 191
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAP 176
+G+ +LH C I+H D+KP+NIL+ T K++DFGLA++ S + +AP
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP 170
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM---- 174
R+ + G+ Y H ++H D+KP+N+L+D AKI+DFGL+ ++SD +
Sbjct: 120 RLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC 176
Query: 175 ------APECYK-RTPISVKADVYGYGIVLLETIC 202
APE R + D++ G++L +C
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 232
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 233 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + + +
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 229
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 230 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 91 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 147
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 148 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD--------KG 172
A +V + YLH + I++ D+KP+NIL+D+ KI+DFG AK + D
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD 168
Query: 173 CMAPECYKRTPISVKADVYGYGIVLLETICCW 204
+APE P + D + +GI++ E + +
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V ++ +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 155
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 156 GLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 208
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 209 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
Query: 268 KCVVMML 274
+ + L
Sbjct: 260 EYLQAFL 266
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------- 165
R + G++YLH I H DIKP+N+L+DE KISDFGLA
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 166 KLLSDKGCMAPECYKRTPISVK-ADVYGYGIVL 197
K+ +APE KR + DV+ GIVL
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------- 165
R + G++YLH I H DIKP+N+L+DE KISDFGLA
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 166 KLLSDKGCMAPECYKRTPISVK-ADVYGYGIVL 197
K+ +APE KR + DV+ GIVL
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------- 165
R + G++YLH I H DIKP+N+L+DE KISDFGLA
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 166 KLLSDKGCMAPECYKRTPISVK-ADVYGYGIVL 197
K+ +APE KR + DV+ GIVL
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 93 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 149
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 150 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------- 165
R + G++YLH I H DIKP+N+L+DE KISDFGLA
Sbjct: 109 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165
Query: 166 KLLSDKGCMAPECYKRTPISVK-ADVYGYGIVL 197
K+ +APE KR + DV+ GIVL
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 96 LPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFW 155
L D A+ I S Q + A DVA+G+ YL + +H D+ +NIL+ E +
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENY 179
Query: 156 TAKISDFGLAK---LLSDKGC-------MAPECYKRTPISVKADVYGYGIVLLETI 201
AKI+DFGL++ + K MA E + + +DV+ YG++L E +
Sbjct: 180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V ++ +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADF 155
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
GLA+L+ D +G APE ++K+DV+ +GI+L E +
Sbjct: 156 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-------LTTK 208
Query: 211 ASKPEEIILTNWVYKCFINRE-LNKLVRGTEV--DKKNLENLVKVGLWCVQDEPALRPSM 267
P Y +NRE L+++ RG + + E+L + C + EP RP+
Sbjct: 209 GRVP---------YPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF 259
Query: 268 KCVVMML 274
+ + L
Sbjct: 260 EYLQAFL 266
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 83/179 (46%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 232
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 233 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------- 165
R + G++YLH I H DIKP+N+L+DE KISDFGLA
Sbjct: 108 RFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 164
Query: 166 KLLSDKGCMAPECYKRTPISVK-ADVYGYGIVL 197
K+ +APE KR + DV+ GIVL
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NIL+ K+ DFG+A+ ++D G ++PE + +
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + + +
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 225
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L+++ C Q P +RPS ++
Sbjct: 226 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 96 LPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFW 155
L D A+ I S Q + A DVA+G+ YL + +H D+ +NIL+ E +
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENY 169
Query: 156 TAKISDFGLAK---LLSDKGC-------MAPECYKRTPISVKADVYGYGIVLLETI 201
AKI+DFGL++ + K MA E + + +DV+ YG++L E +
Sbjct: 170 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 232
Query: 219 LTNWVYKCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 233 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 232
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 233 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + + +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 234
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 235 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D++ NIL+ E K++DF
Sbjct: 269 FLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 325
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GL +L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 326 GLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 374
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 101 AYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTA 157
A ++ A + Y Q + + + Y HD I+H D+KP+N+L+ +
Sbjct: 123 AGFVYSEAVASHYMRQ-------ILEALRYCHDNN---IIHRDVKPENVLLASKENSAPV 172
Query: 158 KISDFGLAKLLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLL 198
K+ DFG+A L + G MAPE KR P DV+G G++L
Sbjct: 173 KLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 98 WDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA 157
+DL + + +R+ YW R+ + + + Y+H + I+H ++KP NI +DE
Sbjct: 103 YDLIHSENLNQQRDEYW----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNV 155
Query: 158 KISDFGLAK 166
KI DFGLAK
Sbjct: 156 KIGDFGLAK 164
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P + +++A ++A G+ YL+ + +H D+ +N ++ +T KI DFG+ + +
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 182
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 231
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 232 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
+ + +A+G+ ++ +H D++ NIL+ KI+DFGLA+++ D +
Sbjct: 287 IDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343
Query: 172 GC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
G APE ++K+DV+ +GI+L+E + S PE I
Sbjct: 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-------- 395
Query: 226 CFINRELNKLVRGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
L RG + + E L + + C ++ P RP+ + + +L
Sbjct: 396 -------RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NI++ K+ DFG+A+ ++D G ++PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
+ + +A+G+ ++ +H D++ NIL+ KI+DFGLA+++ D +
Sbjct: 114 IDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 170
Query: 172 GC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
G APE ++K+DV+ +GI+L+E + S PE I
Sbjct: 171 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-------- 222
Query: 226 CFINRELNKLVRGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
L RG + + E L + + C ++ P RP+ + + +L
Sbjct: 223 -------RALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NI++ K+ DFG+A+ ++D G ++PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 233
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 234 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NI++ K+ DFG+A+ ++D G ++PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NI++ K+ DFG+A+ ++D G ++PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 197 DARSDVYSLGCVLYEVLT 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 233
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 234 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 234
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 235 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 240
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 241 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 105 FCSAERNPYWN--QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDF 162
F E Y Q V +A +A G+ Y+ +H D+ NIL+ E K++DF
Sbjct: 102 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLAAANILVGENLVCKVADF 158
Query: 163 GLAKLLSD------KGC------MAPECYKRTPISVKADVYGYGIVLLE 199
GLA+L+ D +G APE ++K+DV+ +GI+L E
Sbjct: 159 GLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 207
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 231
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 232 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD- 170
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + + +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 171 -------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 240
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 241 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 227
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 228 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-------SDK 171
+I L K + +L + + I+H DIKP NIL+D K+ DFG++ L D
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 172 GC---MAPE----CYKRTPISVKADVYGYGIVLLE 199
GC MAPE R V++DV+ GI L E
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYE 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 230
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 231 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 99 DLAYIIFCSAERNPYWNQ----RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DLA +I + Y ++ RV L +A + + +LH D+KP N+ +D
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 155 WTAKISDFGLAKLLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLE 199
K+ DFGLA++L+ M+PE R + K+D++ G +L E
Sbjct: 153 QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAP 176
+G+ +LH C I+H D+KP+NIL+ T K++DFGLA++ S + + P
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N ++ E +T KI DFG+ + +
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 262
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L ++ C Q P +RPS ++
Sbjct: 263 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNIL---MDEFWTAKISDFGLAKL------LS 169
R+ V + YLHD I+H D+KP+N+L +DE ISDFGL+K+ LS
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 170 DK----GCMAPECYKRTPISVKADVYGYGIVLLETICCWENM--EIDASKPEEIILTNWV 223
G +APE + P S D + G++ +C + E DA E+I+ +
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 224 Y 224
+
Sbjct: 237 F 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------------CMAPECYKRTPI 184
I+H D+KP NI++ K+ DFG+A+ ++D G ++PE + +
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 185 SVKADVYGYGIVLLETIC 202
++DVY G VL E +
Sbjct: 214 DARSDVYSLGCVLYEVLT 231
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNIL---MDEFWTAKISDFGLAKL------LS 169
R+ V + YLHD I+H D+KP+N+L +DE ISDFGL+K+ LS
Sbjct: 120 RLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 170 DK----GCMAPECYKRTPISVKADVYGYGIVLLETICCWENM--EIDASKPEEIILTNWV 223
G +APE + P S D + G++ +C + E DA E+I+ +
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 224 Y 224
+
Sbjct: 237 F 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 99 DLAYIIFCSAERNPYWNQ----RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DLA +I + Y ++ RV L +A + + +LH D+KP N+ +D
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 155 WTAKISDFGLAKLLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLE 199
K+ DFGLA++L+ M+PE R + K+D++ G +L E
Sbjct: 153 QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL + C ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 111 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 167
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 168 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL + C ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 113 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 169
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNIL---MDEFWTAKISDFGLAKL------LS 169
R+ V + YLHD I+H D+KP+N+L +DE ISDFGL+K+ LS
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 170 DK----GCMAPECYKRTPISVKADVYGYGIVLLETICCWENM--EIDASKPEEIILTNWV 223
G +APE + P S D + G++ +C + E DA E+I+ +
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 224 Y 224
+
Sbjct: 237 F 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL + C ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 110 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 166
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 167 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG----------C 173
+ KG+ Y+H + ++H D+KP NI + + KI DFGL L + G
Sbjct: 145 ITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRY 201
Query: 174 MAPECYKRTPISVKADVYGYGIVLLETI 201
M+PE + D+Y G++L E +
Sbjct: 202 MSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL + C ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 108 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 164
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 17/96 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGL-AKLLSDK------ 171
++ + + K + YL ++ ++H D+KP NIL+DE K+ DFG+ +L+ DK
Sbjct: 128 KMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 172 GC---MAPECYK-----RTPISVKADVYGYGIVLLE 199
GC MAPE + ++ADV+ GI L+E
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC--------- 173
D + +LH + ++H D+KP NI + K+ DFGL L G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 174 -MAPECYKRTPISVKADVYGYGIVLLETICCWENMEI 209
MAPE + + ADV+ G+ +LE C NME+
Sbjct: 222 YMAPELLQGS-YGTAADVFSLGLTILEVAC---NMEL 254
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 28/115 (24%)
Query: 114 WNQRVRIALDVAKGILYLHDEC--------EPPILHCDIKPQNILMDEFWTAKISDFGLA 165
WN+ +A +++G+ YLH++ +P I H D K +N+L+ TA ++DFGLA
Sbjct: 111 WNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
Query: 166 -------------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLETI 201
+ + MAPE ++R ++ D+Y G+VL E +
Sbjct: 171 VRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWELV 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------A 175
+G+ +LH C I+H D+KP+NIL+ T K++DFGLA++ S + + A
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 176 PECYKRTPISVKADVYGYGIVLLE 199
PE ++ + D++ G + E
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------A 175
+G+ +LH C I+H D+KP+NIL+ T K++DFGLA++ S + + A
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRA 179
Query: 176 PECYKRTPISVKADVYGYGIVLLE 199
PE ++ + D++ G + E
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAE 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNIL---MDEFWTAKISDFGLAKL------LS 169
R+ V + YLHD I+H D+KP+N+L +DE ISDFGL+K+ LS
Sbjct: 120 RLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 176
Query: 170 DK----GCMAPECYKRTPISVKADVYGYGIVLLETICCWENM--EIDASKPEEIILTNWV 223
G +APE + P S D + G++ +C + E DA E+I+ +
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 236
Query: 224 Y 224
+
Sbjct: 237 F 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 99 DLAYIIFCSAERNPYWNQ----RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DLA +I + Y ++ RV L +A + + +LH D+KP N+ +D
Sbjct: 93 DLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK 152
Query: 155 WTAKISDFGLAKLLSDKG-----------CMAPECYKRTPISVKADVYGYGIVLLE 199
K+ DFGLA++L+ M+PE R + K+D++ G +L E
Sbjct: 153 QNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL + C ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 130 LDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 186
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 187 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 96 LPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFW 155
L D A+ I S Q + A DVA+G+ YL + +H ++ +NIL+ E +
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENY 176
Query: 156 TAKISDFGLAK---LLSDKGC-------MAPECYKRTPISVKADVYGYGIVLLETI 201
AKI+DFGL++ + K MA E + + +DV+ YG++L E +
Sbjct: 177 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC--MA 175
+ + +A+G+ ++ +H D++ NIL+ KI+DFGLA++ + A
Sbjct: 281 IDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTA 337
Query: 176 PECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKL 235
PE ++K+DV+ +GI+L+E + S PE I L
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---------------RAL 382
Query: 236 VRGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
RG + + E L + + C ++ P RP+ + + +L
Sbjct: 383 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
V +A VA G+ Y+ +H D++ NIL+ KI+DFGLA+L+ D +
Sbjct: 108 VDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 172 GC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G APE ++K+DV+ +GI+L E +
Sbjct: 165 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q + A + +G+ YLH + +H D+ +N+L+D KI DFGLAK + +
Sbjct: 135 QLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
APEC K +DV+ +G+ L E + ++ + +K E+I
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P ++ +++A ++A G+ YL+ +H D+ +N + E +T KI DFG+ + +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG M+PE K + +DV+ +G+VL E A +P
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL-------AEQP---- 227
Query: 219 LTNWVYKCFINRELNKLV-RGTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
Y+ N ++ + V G +DK + + L+++ C Q P +RPS ++
Sbjct: 228 -----YQGLSNEQVLRFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGLA++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
I+H D+KP+N+L+DE KI+DFGL+ +++D + C
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
I+H D+KP+N+L+DE KI+DFGL+ +++D + C
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-----KGC------MAPEC 178
++HD ILH DIK QNI + + T ++ DFG+A++L+ + C ++PE
Sbjct: 140 HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 179 YKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIIL---------TNWVYKCFIN 229
+ P + K+D++ G VL E C +A + ++L + Y +
Sbjct: 197 CENKPYNNKSDIWALGCVLYE--LCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLR 254
Query: 230 RELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSM 267
+++L + D+ ++ ++++ G + E L P +
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQL 292
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
I+H D+KP+N+L+DE KI+DFGL+ +++D + C
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
I+H D+KP+N+L+DE KI+DFGL+ +++D + C
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 163
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P + +++A ++A G+ YL+ + +H ++ +N ++ +T KI DFG+ + +
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 184
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 185 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 233
Query: 219 LTNWVYKCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 234 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + YLH++ ++H DIK +IL+ K+SDFG +S +
Sbjct: 146 VCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV 202
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E I
Sbjct: 203 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 35/179 (19%)
Query: 112 PYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--- 168
P + +++A ++A G+ YL+ + +H ++ +N ++ +T KI DFG+ + +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 169 -----SDKGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
KG MAPE K + +D++ +G+VL WE + A +P
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL------WEITSL-AEQP---- 232
Query: 219 LTNWVYKCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVVMML 274
Y+ N ++ K V G +D+ + E + + C Q P +RP+ +V +L
Sbjct: 233 -----YQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 95 DLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DL L+ + + E ++ + +ALD +LH I++ D+KP+NIL+DE
Sbjct: 113 DLFTRLSKEVMFTEEDVKFYLAELALALD------HLHSLG---IIYRDLKPENILLDEE 163
Query: 155 WTAKISDFGLAKLLSDK-----------GCMAPECYKRTPISVKADVYGYGIVLLETICC 203
K++DFGL+K D MAPE R + AD + +G+++ E +
Sbjct: 164 GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
+ + +A+G+ Y+ + +H D++ N+L+ E KI+DFGLA+++ D +
Sbjct: 113 IDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
Query: 172 GC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G APE ++K+DV+ +GI+L E +
Sbjct: 170 GAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 95 DLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DL L+ + + E ++ + +ALD +LH I++ D+KP+NIL+DE
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALD------HLHSLG---IIYRDLKPENILLDEE 162
Query: 155 WTAKISDFGLAKLLSDK-----------GCMAPECYKRTPISVKADVYGYGIVLLETICC 203
K++DFGL+K D MAPE R + AD + +G+++ E +
Sbjct: 163 GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 20/97 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG------- 172
I +V +G+ YLH + +H D+K NIL+ E + +I+DFG++ L+ G
Sbjct: 126 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 173 --------C-MAPECYKRT-PISVKADVYGYGIVLLE 199
C MAPE ++ KAD++ +GI +E
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG++YL E ++H D+ +N+L+ KI+DFGLA+LL +D G
Sbjct: 124 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
MA EC + ++DV+ YG+ + WE M KP + I T
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTI------WELMTF-GGKPYDGIPT 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 23/112 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG++YL E ++H D+ +N+L+ KI+DFGLA+LL +D G
Sbjct: 147 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 203
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILT 220
MA EC + ++DV+ YG+ + WE M KP + I T
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTI------WELMTF-GGKPYDGIPT 248
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 95 DLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEF 154
DL L+ + + E ++ + +ALD +LH I++ D+KP+NIL+DE
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALD------HLHSLG---IIYRDLKPENILLDEE 162
Query: 155 WTAKISDFGLAKLLSDK-----------GCMAPECYKRTPISVKADVYGYGIVLLETICC 203
K++DFGL+K D MAPE R + AD + +G+++ E +
Sbjct: 163 GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 20/97 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG------- 172
I +V +G+ YLH + +H D+K NIL+ E + +I+DFG++ L+ G
Sbjct: 121 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 173 --------C-MAPECYKRT-PISVKADVYGYGIVLLE 199
C MAPE ++ KAD++ +GI +E
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 271
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 272 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 271
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 272 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 119 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 136 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 119 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 273
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 274 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q + A + +G+ YLH + +H ++ +N+L+D KI DFGLAK + +
Sbjct: 118 QLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
APEC K +DV+ +G+ L E + ++ + +K E+I
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL ++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 97 PWDLAYII-FCSAERNPYWNQRVRIALDVAK--------GILYLHDECEPPILHCDIKPQ 147
P D+ +I + E Y ++ R+ D + I Y H I+H D+KP+
Sbjct: 81 PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPE 137
Query: 148 NILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
N+L+D+ KI+DFGL+ +++D + C
Sbjct: 138 NLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM------- 174
LDV +G+ YL E ++H D+ +N L+ E K+SDFG+ + + D
Sbjct: 110 LDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF 166
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETI 201
+PE + + S K+DV+ +G+++ E
Sbjct: 167 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------APECY-KRTPISVK 187
++H D+KP+N+L+D AKI+DFGL+ ++SD + APE R +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE 191
Query: 188 ADVYGYGIVLLETIC 202
D++ G++L +C
Sbjct: 192 VDIWSCGVILYALLC 206
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 146 QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G +PE + +DV+ YGIVL E + E
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 246
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------APECY-KRTPISVK 187
++H D+KP+N+L+D AKI+DFGL+ ++SD + APE R +
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE 191
Query: 188 ADVYGYGIVLLETIC 202
D++ G++L +C
Sbjct: 192 VDIWSCGVILYALLC 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 63 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAF 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
DL + I+ + + V A ++ G+ LH E I++ D+KP+NIL+D+ +
Sbjct: 270 DLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326
Query: 159 ISDFGLAKLLSDK----------GCMAPECYKRTPISVKADVYGYGIVLLETI 201
ISD GLA + + G MAPE K + D + G +L E I
Sbjct: 327 ISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 75 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAF 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 19/106 (17%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL++ L D
Sbjct: 136 QLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 174 --------------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + + +DV+ YGIV+ E + E
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 155 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 259
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 260 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 65 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAF 204
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
DL + I+ + + V A ++ G+ LH E I++ D+KP+NIL+D+ +
Sbjct: 270 DLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIR 326
Query: 159 ISDFGLAKLLSDK----------GCMAPECYKRTPISVKADVYGYGIVLLETI 201
ISD GLA + + G MAPE K + D + G +L E I
Sbjct: 327 ISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 69 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAF 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 18/96 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK------- 171
+IA+ + K + +LH + ++H D+KP N+L++ K DFG++ L D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 172 GC--------MAPECYKRTPISVKADVYGYGIVLLE 199
GC + PE ++ SVK+D++ GI +E
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIE 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q + A + +G+ YLH + +H ++ +N+L+D KI DFGLAK + +
Sbjct: 118 QLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
APEC K +DV+ +G+ L E + ++ + +K E+I
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM- 174
Q + A + +G+ YLH + +H + +N+L+D KI DFGLAK + +
Sbjct: 113 QLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 169
Query: 175 -------------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTN 221
APEC K +DV+ +G+ L E + ++ + +K E+I +
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI-GH 228
Query: 222 WVYKCFINRELNKLVRGTEVDKKN-----LENLVKVGLWCVQDEPALRPSMKCVVMML 274
+ + R L RG + + + + +L+K C + E + RP+ + +V +L
Sbjct: 229 TQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN---CWETEASFRPTFQNLVPIL 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 26/178 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM- 174
Q + A + +G+ YLH + +H + +N+L+D KI DFGLAK + +
Sbjct: 112 QLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 168
Query: 175 -------------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTN 221
APEC K +DV+ +G+ L E + ++ + +K E+I +
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI-GH 227
Query: 222 WVYKCFINRELNKLVRGTEVDKKN-----LENLVKVGLWCVQDEPALRPSMKCVVMML 274
+ + R L RG + + + + +L+K C + E + RP+ + +V +L
Sbjct: 228 TQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN---CWETEASFRPTFQNLVPIL 282
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 69 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAF 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 163 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 267
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 268 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 34/173 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VA+G+ +L +H D+ +N+L+ AKI DFGLA+ +++D K
Sbjct: 161 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 217
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE +V++DV+ YGI+L E N P IL
Sbjct: 218 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-------PYPGIL----- 265
Query: 225 KCFINRELNKLVR-GTEVDKKNL--ENLVKVGLWCVQDEPALRPSMKCVVMML 274
+N + KLV+ G ++ + +N+ + C EP RP+ + + L
Sbjct: 266 ---VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 85 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 85 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 145 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAF 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 38/143 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 83 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 142
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 143 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
S K+DV+ +G+++ E
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAF 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----CMAPECYK 180
+G+ YLH ILH D+KP N+L+DE K++DFGLAK + Y+
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYR 179
Query: 181 RTPISVKADVYGYGI 195
+ A +YG G+
Sbjct: 180 APELLFGARMYGVGV 194
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + V G+ YL D +H D+ +N+L+D K+SDFGL+++L D
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 171 ----KGCM-----APECYKRTPISVKADVYGYGIVLLETICCWE 205
G + APE S +DV+ +G+V+ E + E
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 38/144 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 427 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 486
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 487 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 179 YKRTPISVKADVYGYGIVLLETIC 202
S K+DV+ +G+++ E
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + V G+ YL D +H D+ +N+L+D K+SDFGL+++L D
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 171 ----KGCM-----APECYKRTPISVKADVYGYGIVLLETICCWE 205
G + APE S +DV+ +G+V+ E + E
Sbjct: 209 XTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 38/144 (26%)
Query: 94 LDLPWDLAYIIFCSAER-------------NPYWNQR--------VRIALDVAKGILYLH 132
LD P+ + I C AE N Y Q + + V+ G+ YL
Sbjct: 428 LDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 487
Query: 133 DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC-------------MAPEC 178
E +H D+ +N+L+ AKISDFGL+K L +D+ APEC
Sbjct: 488 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 179 YKRTPISVKADVYGYGIVLLETIC 202
S K+DV+ +G+++ E
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC- 173
Q+++ A+ + KG+ YL +H D+ +N+L++ KI DFGL K + +DK
Sbjct: 115 QQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETI 201
APEC ++ + +DV+ +G+ L E +
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-------LLSDK---- 171
D+ KGI YLH + I+H DIKP N+L+ E KI+DFG++ LLS+
Sbjct: 145 DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 172 GCMAPECYKRTP--ISVKA-DVYGYGIVL 197
MAPE T S KA DV+ G+ L
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + ++ G+ YL D +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 125 QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G APE + +DV+ YGIV+ E + E
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM 174
Q+++ A+ + KG+ YL +H D+ +N+L++ KI DFGL K + +DK
Sbjct: 127 QQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 175 -------------APECYKRTPISVKADVYGYGIVLLETI 201
APEC ++ + +DV+ +G+ L E +
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------M 174
KG+ YLH + +H DIK NIL++ AK++DFG+A L+D M
Sbjct: 136 KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWM 192
Query: 175 APECYKRTPISVKADVYGYGIVLLE 199
APE + + AD++ GI +E
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIE 217
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
+ + +A+G+ Y+ + +H D++ N+L+ E KI+DFGLA+++ D +
Sbjct: 112 IDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 172 GC------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G APE ++K++V+ +GI+L E +
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 33/172 (19%)
Query: 109 ERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
ER + A +++G+ YL E ++H D+ +NIL+ E KISDFGL++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 169 SDKGCMAPECYKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDASKPE 215
++ R P+ + ++DV+ +G++L E + N PE
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPE 259
Query: 216 EIILTNWVYKCFINRELNKLVRGTEVDKKN--LENLVKVGLWCVQDEPALRP 265
R N L G +++ + E + ++ L C + EP RP
Sbjct: 260 --------------RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPE 177
+ A +++G+ YL E ++H D+ +NIL+ E KISDFGL++ + ++
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209
Query: 178 CYKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
R P+ + ++DV+ +G++L E + N PE
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPE--------- 259
Query: 225 KCFINRELNKLVRGTEVDKKN--LENLVKVGLWCVQDEPALRP 265
R N L G +++ + E + ++ L C + EP RP
Sbjct: 260 -----RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
V+ G+ YL E +H D+ +N+L+ AKISDFGL+K L
Sbjct: 119 VSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETI 201
APEC S ++DV+ YG+ + E +
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 17/84 (20%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDE---FWTAKISDFGLAKLL-SDKGC--------- 173
+ Y H + ++H D+KP+NIL + KI DFGLA+L SD+
Sbjct: 136 ALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 174 MAPECYKRTPISVKADVYGYGIVL 197
MAPE +KR ++ K D++ G+V+
Sbjct: 193 MAPEVFKRD-VTFKCDIWSAGVVM 215
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 116 QRVRIALDVAKGILYLHDECEP-------PILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
QR R LD ++ +LY C+ +H D+ +NIL++ KI+DFGLAKLL
Sbjct: 105 QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
Query: 169 S-DKGC-------------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK APE S ++DV+ +G+VL E
Sbjct: 165 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 33/172 (19%)
Query: 109 ERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
ER + A +++G+ YL E ++H D+ +NIL+ E KISDFGL++ +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 169 SDKGCMAPECYKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDASKPE 215
++ R P+ + ++DV+ +G++L E + N PE
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPE 259
Query: 216 EIILTNWVYKCFINRELNKLVRGTEVDKKN--LENLVKVGLWCVQDEPALRP 265
R N L G +++ + E + ++ L C + EP RP
Sbjct: 260 --------------RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M PE Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETIC 202
+ D++ G ++ E +C
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 28/109 (25%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-- 170
+RI L +A G+ +LH E +P I H D+K +NIL+ + I+D GLA + S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 171 -------------KGCMAPECYKRTPISV-------KADVYGYGIVLLE 199
K MAPE T I V + D++ +G+VL E
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG----------C 173
+ KG+ Y+H + +++ D+KP NI + + KI DFGL L + G
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 174 MAPECYKRTPISVKADVYGYGIVLLETI 201
M+PE + D+Y G++L E +
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 28/109 (25%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-- 170
+RI L +A G+ +LH E +P I H D+K +NIL+ + I+D GLA + S
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 171 -------------KGCMAPECYKRTPISV-------KADVYGYGIVLLE 199
K MAPE T I V + D++ +G+VL E
Sbjct: 168 NQLDVGNNPRVGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWE 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 28/109 (25%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-- 170
+RI L +A G+ +LH E +P I H D+K +NIL+ + I+D GLA + S
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 171 -------------KGCMAPECYKRTPISV-------KADVYGYGIVLLE 199
K MAPE T I V + D++ +G+VL E
Sbjct: 197 NQLDVGNNPRVGTKRYMAPEVLDET-IQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 116 QRVRIALDVAKGILYLHDECEP-------PILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
QR R LD ++ +LY C+ +H D+ +NIL++ KI+DFGLAKLL
Sbjct: 102 QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
Query: 169 S-DKGC-------------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK APE S ++DV+ +G+VL E
Sbjct: 162 PLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 116 QRVRIALDVAKGILYLHDECEP-------PILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
QR R LD ++ +LY C+ +H D+ +NIL++ KI+DFGLAKLL
Sbjct: 118 QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
Query: 169 S-DKGC-------------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK APE S ++DV+ +G+VL E
Sbjct: 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 109 ERNPYWNQRVRIALD-VAKGILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGL 164
ER Y + + + V + YLH E I+H D+KP+N+L +E I+DFGL
Sbjct: 99 ERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
Query: 165 AKLLSDK---------GCMAPECYKRTPISVKADVYGYGIVLLETICCW 204
+K+ + G +APE + P S D + G++ +C +
Sbjct: 156 SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGY 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLA+LL +D G
Sbjct: 126 MQIAKGMSYLEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E R + ++DV+ YG+ + WE M A KP + I
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTV------WELMTFGA-KPYDGI 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSDKGC----- 173
A VAKG+ +L + +H D+ +N+L+ KI DFGLA+ ++SD
Sbjct: 177 FAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 174 -------MAPECYKRTPISVKADVYGYGIVLLETICCWEN 206
MAPE ++K+DV+ YGI+L E N
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNIL---MDEFWTAKISDFGLAKLLSDK--- 171
+R LD + YLH I+H D+KP+N+L DE ISDFGL+K+
Sbjct: 126 IRQVLDA---VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 172 -------GCMAPECYKRTPISVKADVYGYGIVLLETICCW 204
G +APE + P S D + G++ +C +
Sbjct: 180 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 219
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 107 SAERNPYWNQRVR---------IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA 157
+ E N Y RV+ + G+LYLH ILH D+ N+L+
Sbjct: 95 NGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNI 151
Query: 158 KISDFGLA---KLLSDK--------GCMAPECYKRTPISVKADVYGYGIVLLETICCWEN 206
KI+DFGLA K+ +K ++PE R+ +++DV+ G + +
Sbjct: 152 KIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
Query: 207 MEIDASKP--EEIILTNWVYKCFINRE----LNKLVRGTEVDKKNLENLV 250
+ D K +++L ++ F++ E +++L+R D+ +L +++
Sbjct: 212 FDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 116 QRVRIALDVAKGILYLHDECEP-------PILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
QR R LD ++ +LY C+ +H D+ +NIL++ KI+DFGLAKLL
Sbjct: 106 QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
Query: 169 S-DKGC-------------MAPECYKRTPISVKADVYGYGIVLLETI 201
DK APE S ++DV+ +G+VL E
Sbjct: 166 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMA 175
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS + A
Sbjct: 118 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 167
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
+Q + + DV +G+ +L +H D+ +N L+D K+SDFG+ + + D +
Sbjct: 104 SQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160
Query: 175 ------------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNW 222
APE + S K+DV+ +GI++ E + M D E++L
Sbjct: 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVL--- 216
Query: 223 VYKCFINRELNKLVRGTEVDKKNL--ENLVKVGLWCVQDEPALRPSMK 268
K+ +G + + +L + + ++ C + P RP+ +
Sbjct: 217 -----------KVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQ 253
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 114 WNQRVRIALDVAKGILYLH------DECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
W R+A V +G+ YLH D +P I H D+ +N+L+ T ISDFGL+
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 168 LSDKGCMAP 176
L+ + P
Sbjct: 170 LTGNRLVRP 178
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMA 175
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS + A
Sbjct: 117 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 166
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 141 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 184
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + + G+ YL D +H D+ +NIL++ K+SDFG++++L D
Sbjct: 132 QLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
+G APE + +DV+ YGIV+ E + E
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 232
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMA 175
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS + A
Sbjct: 116 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 165
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMA 175
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS + A
Sbjct: 115 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 164
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 104 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 163
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 164 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +R ++ + ALD YLH E +++ D+K +N+++D+ KI+DFGL K
Sbjct: 246 SEDRARFYGAEIVSALD------YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
Query: 167 LLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G +APE + D +G G+V+ E +C
Sbjct: 298 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 344
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 101 AYIIFCSAERNPY---WNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA 157
A+++ NP+ VR +D+A G+ YL +H D+ +N ++ E T
Sbjct: 120 AFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176
Query: 158 KISDFGLAKLLSDKGCMAPECYKRTPI-------------SVKADVYGYGIVLLETICCW 204
++DFGL++ + C + P+ +V +DV+ +G+ + W
Sbjct: 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTM------W 230
Query: 205 ENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALR 264
E M P I +Y I N+L + E +E + + C +P R
Sbjct: 231 EIM-TRGQTPYAGIENAEIYNYLIGG--NRLKQPPEC----MEEVYDLMYQCWSADPKQR 283
Query: 265 PSMKCVVMML 274
PS C+ M L
Sbjct: 284 PSFTCLRMEL 293
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + + G+ YL D +H D+ +NIL++ K+SDFG++++L D
Sbjct: 111 QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 167
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEI 217
+G APE + +DV+ YGIV+ E + E D S + I
Sbjct: 168 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 17/116 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + + G+ YL D +H D+ +NIL++ K+SDFG++++L D
Sbjct: 117 QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 173
Query: 171 ---KGC------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEI 217
+G APE + +DV+ YGIV+ E + E D S + I
Sbjct: 174 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 143 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 186
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 109 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 168
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 169 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +R ++ + ALD YLH E +++ D+K +N+++D+ KI+DFGL K
Sbjct: 249 SEDRARFYGAEIVSALD------YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
Query: 167 LLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G +APE + D +G G+V+ E +C
Sbjct: 301 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 347
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 95 DLPWDLA-YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDE 153
DL + L+ + +F A+ Y A ++ G+ ++H+ +++ D+KP NIL+DE
Sbjct: 277 DLHYHLSQHGVFSEADMRFY-------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 326
Query: 154 FWTAKISDFGLAKLLSDK---------GCMAPECYKR-TPISVKADVYGYGIVLLETI 201
+ISD GLA S K G MAPE ++ AD + G +L + +
Sbjct: 327 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 140 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 181
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 188
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 189 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL D +H D+ +NIL++ K+SDFGL++++ D
Sbjct: 146 QLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 171 ----KGCM-----APECYKRTPISVKADVYGYGIVLLETICCWE 205
G + APE + + +DV+ YGIV+ E + E
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 95 DLPWDLA-YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDE 153
DL + L+ + +F A+ Y A ++ G+ ++H+ +++ D+KP NIL+DE
Sbjct: 278 DLHYHLSQHGVFSEADMRFY-------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 154 FWTAKISDFGLAKLLSDK---------GCMAPECYKR-TPISVKADVYGYGIVLLETI 201
+ISD GLA S K G MAPE ++ AD + G +L + +
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M PE Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETIC 202
+ D++ G ++ E +C
Sbjct: 195 EVILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
L + GI Y HD +LH D+KPQN+L++ KI+DFGLA+
Sbjct: 107 LQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
L + GI Y HD +LH D+KPQN+L++ KI+DFGLA+
Sbjct: 107 LQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 106 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 165
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 166 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
L + GI Y HD +LH D+KPQN+L++ KI+DFGLA+
Sbjct: 107 LQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 95 DLPWDLA-YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDE 153
DL + L+ + +F A+ Y A ++ G+ ++H+ +++ D+KP NIL+DE
Sbjct: 278 DLHYHLSQHGVFSEADMRFY-------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 154 FWTAKISDFGLAKLLSDK---------GCMAPECYKR-TPISVKADVYGYGIVLLETI 201
+ISD GLA S K G MAPE ++ AD + G +L + +
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 95 DLPWDLA-YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDE 153
DL + L+ + +F A+ Y A ++ G+ ++H+ +++ D+KP NIL+DE
Sbjct: 278 DLHYHLSQHGVFSEADMRFY-------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 154 FWTAKISDFGLAKLLSDK---------GCMAPECYKR-TPISVKADVYGYGIVLLETI 201
+ISD GLA S K G MAPE ++ AD + G +L + +
Sbjct: 328 HGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 13/85 (15%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------M 174
V Y+H+E I H D+KP NILMD+ K+SDFG ++ + DK M
Sbjct: 160 VLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFM 217
Query: 175 APECY--KRTPISVKADVYGYGIVL 197
PE + + + K D++ GI L
Sbjct: 218 PPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 95 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 151
Query: 162 FGLAK-LLSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 152 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 145 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 188
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 137 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 180
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 92 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148
Query: 162 FGLAKL-LSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++ + YLH + I+H D+KP+NIL++E +I+DFG AK+LS
Sbjct: 122 EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 165
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA------- 165
+++AL A G+ +LH E +P I H D+K +NIL+ + T I+D GLA
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 201
Query: 166 --------KLLSDKGCMAPEC------YKRTPISVKADVYGYGIVLLE 199
+ K MAPE K +AD+Y G+V E
Sbjct: 202 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 92 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148
Query: 162 FGLAK-LLSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNIL-MDEFWTA---KISDFGLAKLL-SDKGCM---- 174
+ K + YLH + ++H D+KP NIL +DE +I DFG AK L ++ G +
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 175 ------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDASK-PEEII 218
APE KR D++ GI+L + + S PEEI+
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 92 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148
Query: 162 FGLAKL-LSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 97 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 153
Query: 162 FGLAKL-LSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 154 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 92 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148
Query: 162 FGLAK-LLSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +R ++ + ALD YLH E +++ D+K +N+++D+ KI+DFGL K
Sbjct: 106 SEDRARFYGAEIVSALD------YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
Query: 167 LLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G +APE + D +G G+V+ E +C
Sbjct: 158 EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 204
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +R ++ + ALD YLH E +++ D+K +N+++D+ KI+DFGL K
Sbjct: 107 SEDRARFYGAEIVSALD------YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
Query: 167 LLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G +APE + D +G G+V+ E +C
Sbjct: 159 EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
+ F + + +R R ++ + YLH +++ DIK +N+++D+ KI+D
Sbjct: 92 LFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITD 148
Query: 162 FGLAK-LLSDKGCM----------APECYKRTPISVKADVYGYGIVLLETIC 202
FGL K +SD M APE + D +G G+V+ E +C
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 19/118 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q V + +A G+ YL E +H D+ +NIL++ K+SDFGL++ L +
Sbjct: 117 QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 174 --------------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEI 217
APE + +D + YGIV+ E + E D S + I
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI 231
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----K 171
+ + VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D K
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE ++++DV+ +G++L WE + AS + +
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEE-- 255
Query: 225 KCFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
R L + R D E + + L C EP+ RP+ +V L
Sbjct: 256 ---FXRRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 19/107 (17%)
Query: 107 SAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
S +R ++ + ALD YLH E +++ D+K +N+++D+ KI+DFGL K
Sbjct: 108 SEDRARFYGAEIVSALD------YLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
Query: 167 LLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLLETIC 202
G +APE + D +G G+V+ E +C
Sbjct: 160 EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES 179
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 110 RNPYWNQRVR--IALDVAKGILYLHDECEPPILHCDIKPQNIL-MDEFWTA---KISDFG 163
R ++++R + + K + YLH + ++H D+KP NIL +DE +I DFG
Sbjct: 114 RQKFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFG 170
Query: 164 LAKLL-SDKGCM----------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDAS 212
AK L ++ G + APE KR D++ GI+L + + S
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 213 K-PEEII 218
PEEI+
Sbjct: 231 DTPEEIL 237
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 19/106 (17%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q V + +A G+ YL E +H D+ +NIL++ K+SDFGL++ L +
Sbjct: 119 QLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 174 --------------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + +D + YGIV+ E + E
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 221
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGL---------AKLL 168
V + +A G+ YL ++H D+ +N+L+ + KISD GL KLL
Sbjct: 148 VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 169 SDKGC----MAPECYKRTPISVKADVYGYGIVL-------LETICCWENMEI 209
+ MAPE S+ +D++ YG+VL L+ C + N ++
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G+++ E I
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
+Q V+ ALD+A+G+ +LH EP I + +++++DE TA+IS + G M
Sbjct: 111 SQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM 169
Query: 175 ------APECYKRTPISVK---ADVYGYGIVLLETIC 202
APE ++ P AD++ + ++L E +
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGL---------AKLL 168
V + +A G+ YL ++H D+ +N+L+ + KISD GL KLL
Sbjct: 131 VHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 169 SDKGC----MAPECYKRTPISVKADVYGYGIVL-------LETICCWENMEI 209
+ MAPE S+ +D++ YG+VL L+ C + N ++
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPE 177
+++ D A G+ YL +C +H D+ +N L+ E KISDFG+++ +D A
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 178 CYKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDAS 212
++ P+ S ++DV+ +GI+L WE + AS
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILL------WETFSLGAS 314
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G+++ E I
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDKG------- 172
D++ + YLH E I+H D+KP+NI++ + KI D G AK L D+G
Sbjct: 129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFV 184
Query: 173 ----CMAPECYKRTPISVKADVYGYGIVLLETICCW 204
+APE ++ +V D + +G + E I +
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDKG------- 172
D++ + YLH E I+H D+KP+NI++ + KI D G AK L D+G
Sbjct: 130 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL-DQGELCTEFV 185
Query: 173 ----CMAPECYKRTPISVKADVYGYGIVLLETICCW 204
+APE ++ +V D + +G + E I +
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-----KG 172
+++ D A G+ YL +C +H D+ +N L+ E KISDFG+++ +D G
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 173 CM--------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDAS 212
+ APE S ++DV+ +GI+L WE + AS
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILL------WETFSLGAS 314
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 122 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 178
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 179 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 214
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 85 GSKPSTEAALDL-PWDLAYIIFCSAERNPYWNQRVRIAL-DVAKGILYLHDECEPPILHC 142
G S LDL DL II S P + VR L + +G+ Y+H ++H
Sbjct: 129 GEFKSVYVVLDLMESDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHR 182
Query: 143 DIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYK 180
D+KP N+L++E KI DFG+A+ L C +P ++
Sbjct: 183 DLKPSNLLVNENCELKIGDFGMARGL----CTSPAEHQ 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC--------- 173
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 130 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 186
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 187 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q V + +A G+ YL D +H + +NIL++ K+SDFGL++ L D
Sbjct: 110 QLVGMLRGIAAGMKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 174 --------------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + + +DV+ YGIV+ E + E
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 129 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 185
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 186 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL + +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 154 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 210
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----- 174
+ + +G+ +LH ++H D+KPQNIL+ K++DFGLA++ S + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE ++ + D++ G + E
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 126 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 183 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 141 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 197
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 198 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL + +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 127 ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 183
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 184 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 128 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 184
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 185 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 121 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 177
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 178 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 213
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGCM-------- 174
+ KG+ YL +H D+ +NIL++ KI DFGL K+L DK
Sbjct: 123 ICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 179
Query: 175 -----APECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 180 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDE---FWTAKISDFGLAKLLSDK----- 171
I + GI YLH + I+H DIKP+NIL++ KI DFGL+ S
Sbjct: 151 IMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRD 207
Query: 172 --GC---MAPECYKRTPISVKADVYGYGIVLLETICCW 204
G +APE K+ + K DV+ G+++ +C +
Sbjct: 208 RLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGY 244
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----- 174
+ + +G+ +LH ++H D+KPQNIL+ K++DFGLA++ S + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE ++ + D++ G + E
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M PE Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G ++ E I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 12/98 (12%)
Query: 85 GSKPSTEAALDL-PWDLAYIIFCSAERNPYWNQRVRIAL-DVAKGILYLHDECEPPILHC 142
G S LDL DL II S P + VR L + +G+ Y+H ++H
Sbjct: 130 GEFKSVYVVLDLMESDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHR 183
Query: 143 DIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYK 180
D+KP N+L++E KI DFG+A+ L C +P ++
Sbjct: 184 DLKPSNLLVNENCELKIGDFGMARGL----CTSPAEHQ 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----- 174
+ + +G+ +LH ++H D+KPQNIL+ K++DFGLA++ S + +
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 175 -----APECYKRTPISVKADVYGYGIVLLE 199
APE ++ + D++ G + E
Sbjct: 182 TLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 120 IALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KG 172
+ VAKG+ +L + C +H D+ +NIL+ KI DFGLA+ + + KG
Sbjct: 173 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKG 228
Query: 173 C-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
MAPE + ++DV+ YGI L WE + +S + + + YK
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFL------WELFSLGSSPYPGMPVDSKFYK 282
Query: 226 CFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+E +++ E + +++K C +P RP+ K +V ++
Sbjct: 283 MI--KEGFRML-SPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 28/136 (20%)
Query: 90 TEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGIL----YLHDECEPPILHCDIK 145
TE +L L +F Y+++R A D K IL YLH E I+H D+K
Sbjct: 121 TEISLVLELVTGGELFDRIVEKGYYSER--DAADAVKQILEAVAYLH---ENGIVHRDLK 175
Query: 146 PQNILMDEFWTA------KISDFGLAKLLSDK----------GCMAPECYKRTPISVKAD 189
P+N+L + T KI+DFGL+K++ + G APE + + D
Sbjct: 176 PENLL---YATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVD 232
Query: 190 VYGYGIVLLETICCWE 205
++ GI+ +C +E
Sbjct: 233 MWSVGIITYILLCGFE 248
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 101 AYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTA 157
A ++ A + Y Q + + + Y HD I+H D+KP +L+ +
Sbjct: 125 AGFVYSEAVASHYMRQ-------ILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPV 174
Query: 158 KISDFGLAKLLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLL 198
K+ FG+A L + G MAPE KR P DV+G G++L
Sbjct: 175 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ Y H + +LH D+KPQN+L++E K++DFGLA+
Sbjct: 107 FQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-- 173
Q V A +++ G+ +LH I++ D+K N+++D KI+DFG+ K G
Sbjct: 121 QAVFYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT 177
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETIC 202
+APE P D + YG++L E +
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 116 QRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD----- 170
Q V + +A G+ YL + +H D+ +NIL++ K+SDFGL+++L D
Sbjct: 148 QLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 171 ----KGCM-----APECYKRTPISVKADVYGYGIVLLETICCWE 205
G + APE + +DV+ +GIV+ E + E
Sbjct: 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
V+ G+ YL E +H ++ +N+L+ AKISDFGL+K L
Sbjct: 445 VSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPE 215
APEC S ++DV+ YG+ + E + + PE
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 158 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 214
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 215 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 257
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 120 IALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KG 172
+ VAKG+ +L + C +H D+ +NIL+ KI DFGLA+ + + KG
Sbjct: 150 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 205
Query: 173 C-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
MAPE + ++DV+ YGI L WE + +S + + + YK
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFL------WELFSLGSSPYPGMPVDSKFYK 259
Query: 226 CFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+E +++ E + +++K C +P RP+ K +V ++
Sbjct: 260 MI--KEGFRML-SPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 302
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 24/112 (21%)
Query: 101 AYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTA 157
A ++ A + Y Q + + + Y HD I+H D+KP +L+ +
Sbjct: 123 AGFVYSEAVASHYMRQ-------ILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPV 172
Query: 158 KISDFGLAKLLSDKGC-----------MAPECYKRTPISVKADVYGYGIVLL 198
K+ FG+A L + G MAPE KR P DV+G G++L
Sbjct: 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 252 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 308
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------K 171
+ + VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + K
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 172 GC-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
G MAPE ++++DV+ +G++L WE + AS + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEF- 260
Query: 225 KCFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
C R L + R D E + + L C EP+ RP+ +V L
Sbjct: 261 -C---RRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 120 IALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KG 172
+ VAKG+ +L + C +H D+ +NIL+ KI DFGLA+ + + KG
Sbjct: 168 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 223
Query: 173 C-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
MAPE + ++DV+ YGI L WE + +S + + + YK
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFL------WELFSLGSSPYPGMPVDSKFYK 277
Query: 226 CFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+E +++ E + +++K C +P RP+ K +V ++
Sbjct: 278 MI--KEGFRML-SPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 320
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------- 170
+ I L +A+ + +LH + ++H D+KP NI K+ DFGL +
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 171 ----------------KGCMAPECYKRTPISVKADVYGYGIVLLETI 201
K M+PE S K D++ G++L E +
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 120 IALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KG 172
+ VAKG+ +L + C +H D+ +NIL+ KI DFGLA+ + + KG
Sbjct: 166 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 221
Query: 173 C-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
MAPE + ++DV+ YGI L WE + +S + + + YK
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFL------WELFSLGSSPYPGMPVDSKFYK 275
Query: 226 CFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+E +++ E + +++K C +P RP+ K +V ++
Sbjct: 276 MI--KEGFRML-SPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 318
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 120 IALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KG 172
+ VAKG+ +L + C +H D+ +NIL+ KI DFGLA+ + + KG
Sbjct: 173 FSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKG 228
Query: 173 C-------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYK 225
MAPE + ++DV+ YGI L WE + +S + + + YK
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFL------WELFSLGSSPYPGMPVDSKFYK 282
Query: 226 CFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
+E +++ E + +++K C +P RP+ K +V ++
Sbjct: 283 MI--KEGFRML-SPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI 325
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 118 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 217
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 230
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 134 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 191 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 125 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 187 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + KG
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 246
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 182 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 224
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 184 ISV-------KADVYGYGIVLLETIC 202
+ D++ G ++ E +C
Sbjct: 200 EVILGMGYKENVDLWSVGCIMGEMVC 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 130 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 186
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 187 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 184 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 226
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 149 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 205
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 206 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 248
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + KG
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 201
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 246
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 13/83 (15%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIAL-DVAKGILYLHDECEPPILHCDIKPQNILMD-EFWT 156
DLA ++ E+ P + R+ + + +G+ Y+H +LH D+KP N+ ++ E
Sbjct: 107 DLANVL----EQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLV 159
Query: 157 AKISDFGLAKLL----SDKGCMA 175
KI DFGLA+++ S KG ++
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLS 182
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 132 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 188
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 189 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 175 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 231
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 246
Query: 228 INREL-NKLVRGTEVDKKNLEN--LVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------- 170
+ I + +A+ + +LH + ++H D+KP NI K+ DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 171 ----------------KGCMAPECYKRTPISVKADVYGYGIVLLETICCW 204
K M+PE S K D++ G++L E + +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 118 VRIALDVAKGILYLHD-ECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------ 170
+ + VA+G+ +L +C +H D+ +NIL+ E KI DFGLA+ +
Sbjct: 202 ISYSFQVARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 171 KGC-------MAPECYKRTPISVKADVYGYGIVLLETI 201
KG MAPE S K+DV+ YG++L E
Sbjct: 258 KGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 251
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 252 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 246
Query: 228 INREL-NKLVRGTEVDKKNLEN--LVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 13/86 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 184 ISV-------KADVYGYGIVLLETIC 202
+ D++ G ++ E +C
Sbjct: 189 EVILGMGYKENVDLWSVGCIMGEMVC 214
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ S M P Y R P
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 125 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 181
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 182 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM-DEFWTAKISDFGLAKL---------LSDKGC 173
+ KG+ +LH PPI+H D+K NI + + KI D GLA L +
Sbjct: 138 ILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEF 196
Query: 174 MAPECYKRTPISVKADVYGYGIVLLE 199
APE Y+ DVY +G LE
Sbjct: 197 XAPEXYEE-KYDESVDVYAFGXCXLE 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK-------- 171
+ L V + + LH + ++H DIK +IL+ K+SDFG +S +
Sbjct: 121 VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV 177
Query: 172 GC---MAPECYKRTPISVKADVYGYGIVLLETI 201
G MAPE R P + D++ GI+++E +
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 121 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 110 RNPYWNQR--VRIALDVAKGILYLHDECEPPILHCDIKPQNIL-MDEFW---TAKISDFG 163
R ++++R + + K + YLH + ++H D+KP NIL +DE + +I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 164 LAKLL-SDKGCM----------APECYKRTPISVKADVYGYGIVLLETICCW---ENMEI 209
AK L ++ G + APE +R D++ G++L + + N
Sbjct: 166 FAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
Query: 210 DASKPEEII 218
D PEEI+
Sbjct: 226 DT--PEEIL 232
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 121 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 114 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGA 170
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDE---FWTAKISDFGLAKLLSDK-------- 171
+ G+ YLH + I H D+KP+NI L+D+ K+ DFGLA + D
Sbjct: 124 ILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFG 180
Query: 172 --GCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGL-AKLLSDK----------- 171
+ + Y+H + H D+KP+N+L DE+ K+ DFGL AK +K
Sbjct: 117 IVSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 172 GCMAPECYK-RTPISVKADVYGYGIVLLETICCW 204
APE + ++ + +ADV+ GI+L +C +
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 126 KGILYLHDECEPPILHCDIKPQNIL--MDEFWTAKISDFGLAKLLSDKGCM--------- 174
+G+ ++H+ I+H DIKP+NI+ + + KI DFGLA L+ +
Sbjct: 160 EGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEF 216
Query: 175 -APECYKRTPISVKADVYGYGIV 196
APE R P+ D++ G++
Sbjct: 217 AAPEIVDREPVGFYTDMWAIGVL 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL-SDKGC--------- 173
+ KG+ YL +H ++ +NIL++ KI DFGL K+L DK
Sbjct: 124 ICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES 180
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
APE + SV +DV+ +G+VL E E
Sbjct: 181 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 216
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + KG
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 255
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 114 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 298
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 299 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD------KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + KG
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 255
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 121 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 76/184 (41%), Gaps = 33/184 (17%)
Query: 108 AERNP----YWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
AE NP +Q + IA +A G++YL + +H D+ +N L+ E KI DFG
Sbjct: 117 AEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173
Query: 164 LAKLLSDKGC-------------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEID 210
+++ + M PE + ++DV+ G+VL E
Sbjct: 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTY------- 226
Query: 211 ASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCV 270
+P + N V +C + + R + + ++ L C Q EP +R ++K +
Sbjct: 227 GKQPWYQLSNNEVIECITQGRVLQRPRTCP------QEVYELMLGCWQREPHMRKNIKGI 280
Query: 271 VMML 274
+L
Sbjct: 281 HTLL 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 21/127 (16%)
Query: 110 RNPYWNQR--VRIALDVAKGILYLHDECEPPILHCDIKPQNIL-MDEFW---TAKISDFG 163
R ++++R + + K + YLH + ++H D+KP NIL +DE + +I DFG
Sbjct: 109 RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165
Query: 164 LAKLL-SDKGCM----------APECYKRTPISVKADVYGYGIVLLETICCWENMEIDAS 212
AK L ++ G + APE +R D++ G++L + +
Sbjct: 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD 225
Query: 213 K-PEEII 218
PEEI+
Sbjct: 226 DTPEEIL 232
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 117 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 173
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 129 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 186 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 121 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 26/108 (24%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLA-KLLSD- 170
+++A G+ +LH E +P I H D+K +NIL+ + T I+D GLA K +SD
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 171 -------------KGCMAPECYKRT------PISVKADVYGYGIVLLE 199
K M PE + + AD+Y +G++L E
Sbjct: 197 NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWE 244
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 121 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 117 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 174 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 118 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA 174
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------------MAPECYKRTPISV 186
+H D+ +N L+ E K++DFGL++L++ APE S+
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSI 210
Query: 187 KADVYGYGIVLLE 199
K+DV+ +G++L E
Sbjct: 211 KSDVWAFGVLLWE 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 114 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 171 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 120 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 177 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 208
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 118 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDK--------- 171
+ + I Y H I+H ++KP+N+L+ + K++DFGLA ++D
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 193
Query: 172 -GCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE K+ P S D++ G++L
Sbjct: 194 PGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 300
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 301 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 255
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 118 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 175 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 36/199 (18%)
Query: 103 IIFCSAERNPYWNQRVRI-ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
++F + + R R A ++ +++LHD+ I++ D+K N+L+D K++D
Sbjct: 111 LMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLAD 167
Query: 162 FGL-----------AKLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENME-- 208
FG+ A +APE + D + G++L E +C E
Sbjct: 168 FGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227
Query: 209 -----IDASKPEEIILTNWVY-------KCFINR----ELNKLVRGTE---VDKKNLENL 249
+A +E++ W++ K F+ + L L +G E + + +
Sbjct: 228 NEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287
Query: 250 VKVGLWCVQDEPALRPSMK 268
L Q EP RP +K
Sbjct: 288 DWAQLNHRQIEPPFRPRIK 306
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H D+ +N L+ E K++DFGL++L++
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLL----------SDKGCMAPECY---KRTPIS 185
I+H D+KP NIL+DE I+DF +A +L K MAPE + K S
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 186 VKADVYGYGIVLLETI 201
D + G+ E +
Sbjct: 196 FAVDWWSLGVTAYELL 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA 210
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 255
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 156 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 257
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 258 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS + + C
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVKIDEEF--C- 313
Query: 228 INRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMKCVVMML 274
R L + R D E + + L C EP+ RP+ +V L
Sbjct: 314 --RRLKEGTRMRAPDYTTPE-MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCM------ 174
V G+ YLH + I+H D+KP+N+L+ ++ KI DFGL+ + ++ M
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 175 ----APECYKRTPISVKADVYGYGIVLLETICCW 204
APE R K DV+ G++L + +
Sbjct: 202 AYYIAPEVL-RKKYDEKCDVWSIGVILFILLAGY 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+G+ + H E ILH D+KPQN+L+++ K+ DFGLA+
Sbjct: 119 QGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--------GC-- 173
V + + YLH + ++H DIK +IL+ K+SDFG +S G
Sbjct: 150 VLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPY 206
Query: 174 -MAPECYKRTPISVKADVYGYGIVLLETI 201
MAPE R+ + + D++ GI+++E +
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 191 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 247
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 248 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 292
Query: 228 INREL-NKLVRGTEVDKKNLEN--LVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-LLSD-----KGC- 173
+ VAKG+ +L +H D+ +NIL+ E KI DFGLA+ + D KG
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCF 227
MAPE ++++DV+ +G++L WE + AS +
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLL------WEIFSLGASPYPGVK--------- 305
Query: 228 INREL-NKLVRGTEVDKKNLE--NLVKVGLWCVQDEPALRPSMKCVVMML 274
I+ E +L GT + + + + L C EP+ RP+ +V L
Sbjct: 306 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
IA VA G+ YL E +H D+ +N L+ E KI+DFGL++ +
Sbjct: 179 IARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 174 -------MAPECYKRTPISVKADVYGYGIVLLETI 201
M PE + ++DV+ YG+VL E
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVKADVYGYGIVLLETICCW 204
I + A Y +T+ W
Sbjct: 191 PEIMLNAMHYN------QTVDIW 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDK--------- 171
+ + I Y H I+H ++KP+N+L+ + K++DFGLA ++D
Sbjct: 114 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 172 -GCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE K+ P S D++ G++L
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDK--------- 171
+ + I Y H I+H ++KP+N+L+ + K++DFGLA ++D
Sbjct: 114 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 170
Query: 172 -GCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE K+ P S D++ G++L
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDK--------- 171
+ + I Y H I+H ++KP+N+L+ + K++DFGLA ++D
Sbjct: 113 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGT 169
Query: 172 -GCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE K+ P S D++ G++L
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 183 LAPEVLVSVGTAGYN----RAVDCW 203
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 183 LAPEVLVSVGTAGYN----RAVDCW 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 183 LAPEVLVSVGTAGYN----RAVDCW 203
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAP 176
I D+ I +LH I H D+KP+N+L ++ K++DFG AK + P
Sbjct: 114 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 170
Query: 177 ECYKRTPISVKADVYG 192
CY TP V +V G
Sbjct: 171 -CY--TPYYVAPEVLG 183
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 182 LAPEVLVSVGTAGYN----RAVDCW 202
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAP 176
I D+ I +LH I H D+KP+N+L ++ K++DFG AK + P
Sbjct: 133 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 189
Query: 177 ECYKRTPISVKADVYG 192
CY TP V +V G
Sbjct: 190 -CY--TPYYVAPEVLG 202
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +A+G+ YL D ++H D+ +N+L+ KI+DFGLAKLL ++ G
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGL-----------AKLLSDKGCM 174
+ + +LH ++H DIK NIL+ + K++DFG ++++ M
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWM 183
Query: 175 APECYKRTPISVKADVYGYGIVLLETI 201
APE R K D++ GI+ +E I
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H ++ +N L+ E K++DFGL++L++
Sbjct: 323 MATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 411
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 322 LAPEVLVSVGTAGYN----RAVDCW 342
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 189 LAPEVLVSVGTAGYN----RAVDCW 209
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------M 174
+ + +LH ++H DIK NIL+ + K++DFG ++ + M
Sbjct: 128 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWM 184
Query: 175 APECYKRTPISVKADVYGYGIVLLETI 201
APE R K D++ GI+ +E I
Sbjct: 185 APEVVTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------MAPEC 178
+LH ++H DIK NIL+ + K++DFG ++ + MAPE
Sbjct: 131 FLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
R K D++ GI+ +E I
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H ++ +N L+ E K++DFGL++L++
Sbjct: 320 MATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 376
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 377 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 408
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------M 174
+ + +LH ++H DIK NIL+ + K++DFG ++ + M
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWM 183
Query: 175 APECYKRTPISVKADVYGYGIVLLETI 201
APE R K D++ GI+ +E I
Sbjct: 184 APEVVTRKAYGPKVDIWSLGIMAIEMI 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 13/66 (19%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFG----------LAKLLSDKGCMAPECYKRTPISVKA 188
I+H D+KP+NIL+D+ ++SDFG L +L G +APE K S+
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILK---CSMDE 277
Query: 189 DVYGYG 194
GYG
Sbjct: 278 THPGYG 283
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWT----AKISDFGLAK----------LLS 169
+ G+ YLH I H D+KP+NI++ + KI DFGLA +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYK 180
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYR 189
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 GILYLHDECEPPILHCDIKPQNILM---DEFWTAKISDFGLAKLLSDKGCMAPEC----Y 179
+ YLH E I+H D+KP+N+L+ +E KI+DFG +K+L + M C Y
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ V GY + CW
Sbjct: 308 LAPEVLVSVGTAGYN----RAVDCW 328
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC------ 173
+A ++ + YL + +H ++ +N L+ E K++DFGL++L++
Sbjct: 362 MATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 174 ------MAPECYKRTPISVKADVYGYGIVLLE 199
APE S+K+DV+ +G++L E
Sbjct: 419 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 450
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G ++ E I
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G ++ E I
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYK 180
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYR 200
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT---AKISDFGLAKLLSDKGCM- 174
RI V GI Y+H + I+H D+KP+NIL++ KI DFGL+ M
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 175 ---------APECYKRTPISVKADVYGYGIVL 197
APE + T K DV+ G++L
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-----------KLLSDKGCMAPEC 178
YLHD I+H D+K NIL K++DFG++ + MAPE
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 179 Y-----KRTPISVKADVYGYGIVLLE 199
K P KADV+ GI L+E
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ +D+ G +A Y+
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
Query: 184 ISV-------KADVYGYGIVLLETI 201
+ D++ G ++ E I
Sbjct: 197 EVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
++I + + ++H + +PPI+H D+K +N+L+ T K+ DFG A +S
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-----------KLLSDKGCMAPEC 178
YLHD I+H D+K NIL K++DFG++ + MAPE
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 179 Y-----KRTPISVKADVYGYGIVLLE 199
K P KADV+ GI L+E
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ +D+ G +A Y+
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ +D+ G +A Y+
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 19/86 (22%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA-----------KLLSDKGCMAPEC 178
YLHD I+H D+K NIL K++DFG++ + MAPE
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 179 Y-----KRTPISVKADVYGYGIVLLE 199
K P KADV+ GI L+E
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIE 232
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 219
Query: 182 TPI-------SVKADVYGYGIVLLETIC 202
I ++ D++ G ++ E +
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 188 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 124 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 181 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 128 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 185 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 23/110 (20%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--------SDKGC 173
+ +AKG+ YL D ++H D+ +N+L+ KI+DFG AKLL ++ G
Sbjct: 126 VQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 174 -----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEII 218
MA E + ++DV+ YG+ + WE M SKP + I
Sbjct: 183 VPIKWMALESILHRIYTHQSDVWSYGVTV------WELMTF-GSKPYDGI 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 104 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 160
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 161 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 197
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 196 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 241
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 242 -------WCLALRPSDRPTFEEI 257
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------MAPECYKRTPISVK 187
++H DIKP N+ + K+ D GL + S K M+PE + K
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK 216
Query: 188 ADVYGYGIVLLE 199
+D++ G +L E
Sbjct: 217 SDIWSLGCLLYE 228
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 191 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 236
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 237 -------WCLALRPSDRPTFEEI 252
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 242
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 243 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 288
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 289 -------WCLALRPSDRPTFEEI 304
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 105 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 162 SSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 198
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 196 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 241
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 242 -------WCLALRPSDRPTFEEI 257
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 20/87 (22%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA------------KLLSDKGCMAPE 177
YLHD I+H D+K NIL K++DFG++ + MAPE
Sbjct: 123 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 178 CY-----KRTPISVKADVYGYGIVLLE 199
K P KADV+ GI L+E
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIE 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 238 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 283
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 284 -------WCLALRPSDRPTFEEI 299
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 115 NQRVRIAL-DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +++I L + +G+ + H ILH D+KPQN+L++ K++DFGLA+
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 217
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 218 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 263
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 264 -------WCLALRPSDRPTFEEI 279
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 115 NQRVRIAL-DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +++I L + +G+ + H ILH D+KPQN+L++ K++DFGLA+
Sbjct: 118 DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 194
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 195 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 240
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 241 -------WCLALRPSDRPTFEEI 256
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC---YKRTP 183
GI +LH I+H D+KP NI++ T KI DFGLA+ M P Y R P
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
Query: 184 -------ISVKADVYGYGIVLLETI 201
+ D++ G ++ E +
Sbjct: 195 EVILGMGYAANVDIWSVGCIMGELV 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 194
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 195 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 240
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 241 -------WCLALRPSDRPTFEEI 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 193
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 194 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 239
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 240 -------WCLALRPSDRPTFEEI 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 211 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 256
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 257 -------WCLALRPSDRPTFEEI 272
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 196 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 241
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 242 -------WCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 229
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 230 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 275
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 276 -------WCLALRPSDRPTFEEI 291
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 223 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 268
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 269 -------WCLALRPSDRPTFEEI 284
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 100 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 156
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 157 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 193
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 157 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 192
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 193 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 252
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 253 TDTWSFGVLLWE 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 211 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 256
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 257 -------WCLALRPSDRPTFEEI 272
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 44/186 (23%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLA--------- 165
N+ +IA ++ KG+ YLH + ILH D+K +N+ D I+DFGL
Sbjct: 130 NKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAG 185
Query: 166 ----KLLSDKG---CMAPECYK---------RTPISVKADVYGYGIVLLETICC-WENME 208
KL G +APE + + P S +DV+ G + E W
Sbjct: 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF-- 243
Query: 209 IDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLENLVKVGLWCVQDEPALRPSMK 268
++P E I+ W + L+++ G E+ + L+C E RP+
Sbjct: 244 --KTQPAEAII--WQMGTGMKPNLSQIGMGKEIS--------DILLFCWAFEQEERPTFT 291
Query: 269 CVVMML 274
++ ML
Sbjct: 292 KLMDML 297
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 200
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 111 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 167
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 168 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 204
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 105 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 161
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 162 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 189
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 191 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 236
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 237 -------WCLALRPSDRPTFEEI 252
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 120 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRA 213
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 238 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 283
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 284 -------WCLALRPSDRPTFEEI 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 210 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSSECQHLIR---------- 255
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 256 -------WCLALRPSDRPTFEEI 271
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 224 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSSECQHLIR---------- 269
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 270 -------WCLALRPSDRPTFEEI 285
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 197
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 16/77 (20%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLA----KLLSDKGC-------MAPEC-----YKRT 182
I+H D+K N+LM +++DFG++ K L + MAPE K T
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 183 PISVKADVYGYGIVLLE 199
P KAD++ GI L+E
Sbjct: 198 PYDYKADIWSLGITLIE 214
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 238 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 283
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 284 -------WCLALRPSDRPTFEEI 299
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 141 HCDIKPQNILMDEFWTAKISDFGLAKLLSDK---------GCM---APECYKRTPISVKA 188
H D+KP+NIL+ A + DFG+A +D+ G + APE + + + +A
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 189 DVYGYGIVLLE 199
D+Y VL E
Sbjct: 217 DIYALTCVLYE 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 137 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 172
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 173 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 232
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 233 TDTWSFGVLLWE 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 186
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 131 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 166
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 227 TDTWSFGVLLWE 238
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT---AKISDFGLAKLLSDKGCM- 174
RI V GI Y+H + I+H D+KP+NIL++ KI DFGL+ M
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 175 ---------APECYKRTPISVKADVYGYGIVL 197
APE + T K DV+ G++L
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 131 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 166
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 227 TDTWSFGVLLWE 238
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 171 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 206
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 207 IAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK 266
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 267 TDTWSFGVLLWE 278
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 147 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 182
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 183 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 242
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 243 TDTWSFGVLLWE 254
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 34/144 (23%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPE--CYKRTPISV 186
+LH DIK +NIL+D K+ DFG LL D + PE Y R
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYH-GR 222
Query: 187 KADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNL 246
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 223 SAAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSSECQHLIR--------- 269
Query: 247 ENLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 270 --------WCLALRPSDRPTFEEI 285
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 130 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 165
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 226 TDTWSFGVLLWEIF 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 210 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 255
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 256 -------WCLALRPSDRPTFEEI 271
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWT---AKISDFGLAKLLSDKGCM- 174
RI V GI Y+H + I+H D+KP+NIL++ KI DFGL+ M
Sbjct: 125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK 181
Query: 175 ---------APECYKRTPISVKADVYGYGIVL 197
APE + T K DV+ G++L
Sbjct: 182 DRIGTAYYIAPEVLRGT-YDEKCDVWSAGVIL 212
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 213
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGL------AKLLS 169
RI V GI Y+H + I+H D+KP+N+L++ + +I DFGL +K +
Sbjct: 130 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
Query: 170 DK-GC---MAPECYKRTPISVKADVYGYGIVL 197
DK G +APE T K DV+ G++L
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 145 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 180
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRA 210
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 130 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 165
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 166 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 225
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 226 TDTWSFGVLLWEIF 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 188
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDKGCM-- 174
I V G YLH + I+H D+KP+N+L++ KI DFGL+ G M
Sbjct: 109 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
Query: 175 --------APECYKRTPISVKADVYGYGIVLLETICCW 204
APE R K DV+ G++L +C +
Sbjct: 166 RLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGY 202
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 166 IXKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 218
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 219 SLTTPCY--TPYYVAPEVLG 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 224 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSXECQHLIR---------- 269
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 270 -------WCLALRPSDRPTFEEI 285
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 223 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSXECQHLIR---------- 268
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 269 -------WCLALRPSDRPTFEEI 284
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGL------AKLLS 169
RI V GI Y+H + I+H D+KP+N+L++ + +I DFGL +K +
Sbjct: 153 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 209
Query: 170 DK-GC---MAPECYKRTPISVKADVYGYGIVL 197
DK G +APE T K DV+ G++L
Sbjct: 210 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 125 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 181
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 224 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSXECQHLIR---------- 269
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 270 -------WCLALRPSDRPTFEEI 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 191 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSSECQHLIR---------- 236
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 237 -------WCLALRPSDRPTFEEI 252
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 145 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 180
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 16/77 (20%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLA----KLLSDKGC-------MAPEC-----YKRT 182
I+H D+K N+LM +++DFG++ K L + MAPE K T
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 183 PISVKADVYGYGIVLLE 199
P KAD++ GI L+E
Sbjct: 190 PYDYKADIWSLGITLIE 206
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 223 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSSECQHLIR---------- 268
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 269 -------WCLALRPSDRPTFEEI 284
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 224
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 225 SLTTPCY--TPYYVAPEVLG 242
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 148 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 183
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 184 IAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK 243
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 244 TDTWSFGVLLWE 255
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 218
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 219 SLTTPCY--TPYYVAPEVLG 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 223 AAVWSLGILLYDMVCG----DIPFEHDEEIIGGQVFFRQRVSSECQHLIR---------- 268
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P+ RP+ + +
Sbjct: 269 -------WCLALRPSDRPTFEEI 284
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 115 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQ 171
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 145 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 180
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 181 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 241 TDTWSFGVLLWEIF 254
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 246
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 247 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 242
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 243 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 292
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYK 180
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYR 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 119 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 294
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGL------AKLL 168
RI V GI Y+H + I+H D+KP+N+L++ + +I DFGL +K +
Sbjct: 153 ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Query: 169 SDK-GC---MAPECYKRTPISVKADVYGYGIVL 197
DK G +APE T K DV+ G++L
Sbjct: 210 KDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 102 YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
Y C+ + +P + L KG+ + H +LH D+KPQN+L++ K++D
Sbjct: 90 YFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLAD 144
Query: 162 FGLAK 166
FGLA+
Sbjct: 145 FGLAR 149
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 40/132 (30%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 131 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 166
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 167 IAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
Query: 188 ADVYGYGIVLLE 199
D + +G++L E
Sbjct: 227 TDTWSFGVLLWE 238
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGLA+ D+ G +A Y+
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 53/134 (39%), Gaps = 40/134 (29%)
Query: 84 RGSKPSTEAALDLPWDLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCD 143
R S+PS+ A LDL + +A D+A G YL + +H D
Sbjct: 122 RPSQPSSLAMLDL---------------------LHVARDIACGCQYLEENH---FIHRD 157
Query: 144 IKPQNILM---DEFWTAKISDFGLAK------LLSDKGC-------MAPECYKRTPISVK 187
I +N L+ AKI DFG+A+ GC M PE + + K
Sbjct: 158 IAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 217
Query: 188 ADVYGYGIVLLETI 201
D + +G++L E
Sbjct: 218 TDTWSFGVLLWEIF 231
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 127 IMKSIGEAIQYLHSIN---IAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 179
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 180 SLTTPCY--TPYYVAPEVLG 197
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 245
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 246 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 295
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG 172
+ GI + H I+H DIKP+NIL+ + K+ DFG A+ L+ G
Sbjct: 131 FQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 253
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 128 IMKSIGEAIQYLHSIN---IAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 180
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 181 SLTTPCY--TPYYVAPEVLG 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 253
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 172
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 173 SLTEPCY--TPYYVAPEVLG 190
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 238
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 239 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 126 IMKSIGEAIQYLHSIN---IAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 178
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 179 SLTTPCY--TPYYVAPEVLG 196
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 116 QRVRIAL---DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG 172
Q V IA +G+ YLH ++H D+K NIL+ E K+ DFG A +++
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 208
Query: 173 C-------MAPE---CYKRTPISVKADVYGYGIVLLE 199
MAPE K DV+ GI +E
Sbjct: 209 XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 253
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 173
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 174 SLTTPCY--TPYYVAPEVLG 191
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 174
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 175 SLTTPCY--TPYYVAPEVLG 192
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 174
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 175 SLTTPCY--TPYYVAPEVLG 192
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 172
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 173 SLTTPCY--TPYYVAPEVLG 190
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC- 173
+Q V+ ALD A+G +LH EP I + +++ +DE TA+IS + G
Sbjct: 111 SQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRX 169
Query: 174 -----MAPECYKRTPISVK---ADVYGYGIVLLETIC 202
+APE ++ P AD + + ++L E +
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVT 206
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK-------ISDFGLAKLLSDKG 172
I + + I YLH I H D+KP+N+L +T+K ++DFG AK +
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLL----YTSKRPNAILKLTDFGFAKETTSHN 188
Query: 173 CMAPECYKRTPISVKADVYG 192
+ CY TP V +V G
Sbjct: 189 SLTTPCY--TPYYVAPEVLG 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDEFW---TAKISDFGLAK----------LLS 169
+ G+ YLH + I H D+KP+NI L+D+ K+ DFG+A +
Sbjct: 117 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDKGCM-- 174
I V G YLH + I+H D+KP+N+L++ KI DFGL+ G M
Sbjct: 126 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
Query: 175 --------APECYKRTPISVKADVYGYGIVLLETICCW 204
APE R K DV+ G++L +C +
Sbjct: 183 RLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGY 219
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---- 173
V A VA+G+ YL +H D+ +N+L+ E KI+DFGLA+ +
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 174 ---------MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVY 224
MAPE + ++DV+ +G++L WE + S Y
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL------WEIFTLGGSP----------Y 253
Query: 225 KCFINRELNKLVR-GTEVDKKN--LENLVKVGLWCVQDEPALRPSMKCVV 271
EL KL++ G +DK + L + C P+ RP+ K +V
Sbjct: 254 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 303
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM 174
Q + + DV + + YL + LH D+ +N L+++ K+SDFGL++ + D
Sbjct: 120 QQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
Query: 175 A------------PECYKRTPISVKADVYGYGIVLLE 199
+ PE + S K+D++ +G+++ E
Sbjct: 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-----------MAPEC 178
+LH ++H +IK NIL+ + K++DFG ++ + MAPE
Sbjct: 132 FLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
Query: 179 YKRTPISVKADVYGYGIVLLETI 201
R K D++ GI+ +E I
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMI 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDEFW---TAKISDFGLAK----------LLS 169
+ G+ YLH + I H D+KP+NI L+D+ K+ DFG+A +
Sbjct: 138 ILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 194
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 32/143 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSD---------KGCMAPECYKRTPISVK- 187
+LH DIK +NIL+D K+ DFG LL D + PE + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I EEII ++ ++ E L+R
Sbjct: 211 AAVWSLGILLYDMVCG----DIPFEHDEEIIRGQVFFRQRVSXECQHLIR---------- 256
Query: 248 NLVKVGLWCVQDEPALRPSMKCV 270
WC+ P RP+ + +
Sbjct: 257 -------WCLALRPXDRPTFEEI 272
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNI-LMDEFW---TAKISDFGLAK----------LLS 169
+ G+ YLH + I H D+KP+NI L+D+ K+ DFG+A +
Sbjct: 124 ILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIV 196
+APE P+ ++AD++ G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC-------MAPE- 177
+G+ YLH ++H D+K NIL+ E K+ DFG A +++ MAPE
Sbjct: 126 QGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEV 182
Query: 178 --CYKRTPISVKADVYGYGIVLLE 199
K DV+ GI +E
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIE 206
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 119 RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 175
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 176 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 115 RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--SDKGCMAPEC 178
+ +AKG+ YL + ++H ++ +N+L+ +++DFG+A LL DK + E
Sbjct: 121 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 179 YKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDA 211
+TPI + ++DV+ YG + WE M A
Sbjct: 178 --KTPIKWMALESIHFGKYTHQSDVWSYG------VTVWELMTFGA 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 125 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 181
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 182 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 218
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK------LLSDK 171
V A ++A G+ +L + I++ D+K N+++D KI+DFG+ K + +
Sbjct: 445 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX 501
Query: 172 GC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKP--EEIILTNWVY 224
C +APE P D + +G++L E + E + + I+ N Y
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 225 KCFINRELNKLVRG 238
+++E + +G
Sbjct: 562 PKSMSKEAVAICKG 575
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL--SDKGCMAPEC 178
+ +AKG+ YL + ++H ++ +N+L+ +++DFG+A LL DK + E
Sbjct: 139 GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 179 YKRTPI-------------SVKADVYGYGIVLLETICCWENMEIDA 211
+TPI + ++DV+ YG + WE M A
Sbjct: 196 --KTPIKWMALESIHFGKYTHQSDVWSYG------VTVWELMTFGA 233
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL---SDKGCM- 174
R A+ VA+G+ YL + +H D+ +N+L+ KI DFGL + L D M
Sbjct: 115 RYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQ 171
Query: 175 ----------APECYKRTPISVKADVYGYGIVLLETI 201
APE K S +D + +G+ L E
Sbjct: 172 EHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
DL I+ C A + + + + +G+ Y+H I+H D+KP N+ ++E +
Sbjct: 118 DLNNIVKCQALSDEHVQ---FLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELR 171
Query: 159 ISDFGLAKLLSDK--GCMAPECYK 180
I DFGLA+ ++ G +A Y+
Sbjct: 172 ILDFGLARQADEEMTGYVATRWYR 195
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGL------AKLLS 169
RI V GI Y+H + I+H D+KP+N+L++ + +I DFGL +K +
Sbjct: 136 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 192
Query: 170 DK-GC---MAPECYKRTPISVKADVYGYGIVL 197
DK G +APE T K DV+ G++L
Sbjct: 193 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 223
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 109 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 20/134 (14%)
Query: 85 GSKPSTEAALDLPWDLAYI----IFCSAERNP-YWNQRVRI-ALDVAKGILYLHDECEPP 138
G S + A L + L YI +F +R + R R A ++A + YLH
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN--- 159
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAK-----------LLSDKGCMAPECYKRTPISVK 187
I++ D+KP+NIL+D ++DFGL K +APE + P
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 188 ADVYGYGIVLLETI 201
D + G VL E +
Sbjct: 220 VDWWCLGAVLYEML 233
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 129 LYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLA-----------KLLSDKGCM 174
++ HD I+H D+KP+N+L+ + K++DFGLA G +
Sbjct: 146 IHQHD-----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYL 200
Query: 175 APECYKRTPISVKADVYGYGIVL 197
+PE ++ P D++ G++L
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 161
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 214
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 215 GVKNNDVIGRIENGE 229
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KPQN+L++ K++DFGLA+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 102 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 162 EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 214
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 215 GVKNNDVIGRIENGE 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 14/73 (19%)
Query: 139 ILHCDIKPQNILM---DEFWTAKISDFGLA-KLLSDK----------GCMAPECYKRTPI 184
I+H D+KP+N+L+ + K++DFGLA ++ D+ G ++PE ++ P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 185 SVKADVYGYGIVL 197
D++ G++L
Sbjct: 184 GKPVDMWACGVIL 196
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM 541
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 594
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 595 GVKNNDVIGRIENGE 609
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAK 166
+LH D+KPQN+L++ K++DFGLA+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 594
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 595 GVKNNDVIGRIENGE 609
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 118 VRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK------LLSDK 171
V A ++A G+ +L + I++ D+K N+++D KI+DFG+ K + +
Sbjct: 124 VFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX 180
Query: 172 GC-----MAPECYKRTPISVKADVYGYGIVLLETIC 202
C +APE P D + +G++L E +
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 14/73 (19%)
Query: 139 ILHCDIKPQNILM---DEFWTAKISDFGLA-KLLSDK----------GCMAPECYKRTPI 184
I+H D+KP+N+L+ + K++DFGLA ++ D+ G ++PE ++ P
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 185 SVKADVYGYGIVL 197
D++ G++L
Sbjct: 184 GKPVDMWACGVIL 196
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNIL--MDEFWTAKISDFGLA-------KLLSDKGC- 173
+ +GI ++H + ILH D+KP+NIL + KI DFGLA KL + G
Sbjct: 196 ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP 252
Query: 174 --MAPECYKRTPISVKADVYGYGIV 196
+APE +S D++ G++
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 153 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI D+GLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 23/101 (22%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CM 174
+G+ YLH+ ++H D+K N+ +++ KI DFGLA + G +
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 175 APECYKRTPISVKADVYGYGIVL---------LETICCWEN 206
APE + S + D++ G +L ET C E
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 135 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYK 180
+G+ Y+H I+H D+KP N+ ++E +I DFGLA+ ++ G +A Y+
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYR 195
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CM 174
+G+ YLH+ ++H D+K N+ +++ KI DFGLA + G +
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 175 APECYKRTPISVKADVYGYGIVL 197
APE + S + D++ G +L
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCIL 232
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CM 174
+G+ YLH+ ++H D+K N+ +++ KI DFGLA + G +
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 175 APECYKRTPISVKADVYGYGIVL 197
APE + S + D++ G +L
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCIL 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 138 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 139 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 130 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
DL I+ C A + + + + +G+ Y+H I+H D+KP N+ ++E +
Sbjct: 110 DLNNIVKCQALSDEHVQ---FLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELR 163
Query: 159 ISDFGLAKLLSDK--GCMAPECYK 180
I DFGLA+ ++ G +A Y+
Sbjct: 164 ILDFGLARQADEEMTGYVATRWYR 187
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 131 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 137 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 141 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKL 167
+ +G+ Y+H +LH D+KP N+L++ KI DFGLA++
Sbjct: 133 ILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CM 174
+G+ YLH+ ++H D+K N+ +++ KI DFGLA + G +
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 175 APECYKRTPISVKADVYGYGIVL 197
APE + S + D++ G +L
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCIL 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
G+ YLH + I+H DIKP N+L+ T KIS G+A+ L
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDE-CEPPILHCDIKPQNILMDEFWTA 157
+ +Y I E + V +A+G+ YL + C +H D+ +N+L+ E
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVM 242
Query: 158 KISDFGLAKLLSDKGC-------------MAPECYKRTPISVKADVYGYGIVLLETICCW 204
KI+DFGLA+ +++ MAPE + ++DV+ +G+++ W
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM------W 296
Query: 205 ENMEIDASKPEEIILTNWVYKCFINRELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEP 261
E + S Y EL KL++ G +DK N N + + + C P
Sbjct: 297 EIFTLGGSP----------YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVP 346
Query: 262 ALRPSMKCVV 271
+ RP+ K +V
Sbjct: 347 SQRPTFKQLV 356
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 107 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 219
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 220 GVKNNDVIGRIENGE 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 105 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 164
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 165 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 217
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 218 GVKNNDVIGRIENGE 232
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 104 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 163
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 216
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 217 GVKNNDVIGRIENGE 231
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ + K I YLH +LH D+KP NIL++ K++DFGL++
Sbjct: 114 VVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 130 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 189
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 190 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 242
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 243 GVKNNDVIGRIENGE 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 214
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 215 GVKNNDVIGRIENGE 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
KG+ Y+H I+H D+KP N+ ++E KI DFGLA+
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 102 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 161
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 214
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 215 GVKNNDVIGRIENGE 229
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILM 151
I V +G+ YLH +C+ I+H DIKP+NILM
Sbjct: 145 IIRQVLQGLDYLHSKCK--IIHTDIKPENILM 174
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
I ++ +G+ +LH + ++H DIK QN+L+ E K+ DFG++ L
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
R+ + G+ Y+H ILH D+K N+L+ K++DFGLA+ S P
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 179 Y 179
Y
Sbjct: 186 Y 186
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
+ +Y I E + V +A+G+ YL + +H D+ +N+L+ E K
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMK 184
Query: 159 ISDFGLAKLLSDKGC-------------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
I+DFGLA+ +++ MAPE + ++DV+ +G+++ WE
Sbjct: 185 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM------WE 238
Query: 206 NMEIDASKPEEIILTNWVYKCFINRELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPA 262
+ S Y EL KL++ G +DK N N + + + C P+
Sbjct: 239 IFTLGGSP----------YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 288
Query: 263 LRPSMKCVV 271
RP+ K +V
Sbjct: 289 QRPTFKQLV 297
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 26/135 (19%)
Query: 116 QRVRIALDVAKGILYLHDEC-------EPPILHCDIKPQNILMDEFWTAKISDFGLAKLL 168
Q + +LD+A ILY + +H DI +N+L+ K+ DFGL++ +
Sbjct: 99 QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158
Query: 169 SD-------KGC-----MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEE 216
D KG MAPE + +DV+ +G +C WE + + KP +
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFG------VCMWEIL-MHGVKPFQ 211
Query: 217 IILTNWVYKCFINRE 231
+ N V N E
Sbjct: 212 GVKNNDVIGRIENGE 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLA 165
I+H D+KP+NIL+D+ K++DFG +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLA 165
I+H D+KP+NIL+D+ K++DFG +
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 99 DLAYIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAK 158
+ +Y I E + V +A+G+ YL + +H D+ +N+L+ E K
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 186
Query: 159 ISDFGLAKLLSDKGC-------------MAPECYKRTPISVKADVYGYGIVLLETICCWE 205
I+DFGLA+ +++ MAPE + ++DV+ +G+++ WE
Sbjct: 187 IADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM------WE 240
Query: 206 NMEIDASKPEEIILTNWVYKCFINRELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPA 262
+ S Y EL KL++ G +DK N N + + + C P+
Sbjct: 241 IFTLGGSP----------YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPS 290
Query: 263 LRPSMKCVV 271
RP+ K +V
Sbjct: 291 QRPTFKQLV 299
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK--LLSDKGC----- 173
A ++ G+ +LH + I++ D+K NIL+D+ KI+DFG+ K +L D
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETI 201
+APE + D + +G++L E +
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFGLAK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 121 ALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK--LLSDKGC----- 173
A ++ G+ +LH + I++ D+K NIL+D+ KI+DFG+ K +L D
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 174 ----MAPECYKRTPISVKADVYGYGIVLLETI 201
+APE + D + +G++L E +
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DFGL + D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 102 YIIFCSAERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISD 161
Y C+ + +P + L KG+ + H +LH D+KPQN+L++ K+++
Sbjct: 90 YFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLAN 144
Query: 162 FGLAK 166
FGLA+
Sbjct: 145 FGLAR 149
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 21/27 (77%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLA 165
I+H D+KP+NIL+D+ K++DFG +
Sbjct: 132 IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
G+ Y+H ILH D+KP N L+++ + K+ DFGLA+
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 158 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 215 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 258
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 259 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 140 LHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
+H D+KP+NIL+ + K+ DFG A+LL+
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLT 153
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KP+N+L++ K++DFGLA+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KP+N+L++ K++DFGLA+
Sbjct: 113 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILM 151
+I V +G+ YLH +C I+H DIKP+NIL+
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILM 151
+I V +G+ YLH +C I+H DIKP+NIL+
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|3H1S|A Chain A, Crystal Structure Of Superoxide Dismutase From Francisella
Tularensis Subsp. Tularensis Schu S4
pdb|3H1S|B Chain B, Crystal Structure Of Superoxide Dismutase From Francisella
Tularensis Subsp. Tularensis Schu S4
Length = 195
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 193 YGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLENLVKV 252
Y + LE+ E +E K + +TN LN LV GTE D +NLE +VK
Sbjct: 13 YAVDALESTISKETIEYHYGKHHQTYVTN----------LNNLVEGTEHDGRNLEEIVKT 62
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E KI+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+DE +++DFG AK + + +APE
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 199
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGY 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ K++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KP+N+L++ K++DFGLA+
Sbjct: 112 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ K++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KP+N+L++ K++DFGLA+
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ K++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
R+ + G+ Y+H ILH D+K N+L+ K++DFGLA+ S P
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 184
Query: 179 YKRTPISV 186
Y +++
Sbjct: 185 YXNRVVTL 192
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 32/145 (22%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLLSDKGCM---------APECYKRTPI-SVK 187
++H DIK +NIL+D AK+ DFG LL D+ PE R ++
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALP 219
Query: 188 ADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINRELNKLVRGTEVDKKNLE 247
A V+ GI+L + +C +I + +EI+ + ++ + L+R
Sbjct: 220 ATVWSLGILLYDMVCG----DIPFERDQEILEAELHFPAHVSPDCCALIR---------- 265
Query: 248 NLVKVGLWCVQDEPALRPSMKCVVM 272
C+ +P+ RPS++ +++
Sbjct: 266 -------RCLAPKPSSRPSLEEILL 283
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ K++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC- 173
Q + +A VA G++YL +H D+ +N L+ + KI DFG+++ +
Sbjct: 129 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETI 201
M PE + ++DV+ +G+VL E
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
+ +G+ + H +LH D+KP+N+L++ K++DFGLA+
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC- 173
Q + +A VA G++YL +H D+ +N L+ + KI DFG+++ +
Sbjct: 135 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETI 201
M PE + ++DV+ +G+VL E
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
R+ + G+ Y+H ILH D+K N+L+ K++DFGLA+ S P
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 179 YKRTPISV 186
Y +++
Sbjct: 186 YXNRVVTL 193
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 96 LPWDLAYIIFCSAE-------RNPYW--NQRVR-IALDVAKGILYLHDECEPPILHCDIK 145
L +D YI+ A+ + P + Q V+ I ++ G ++H E I+H D+K
Sbjct: 102 LKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH---ESGIIHRDLK 158
Query: 146 PQNILMDEFWTAKISDFGLAKLL-SDK 171
P N L+++ + KI DFGLA+ + SDK
Sbjct: 159 PANCLLNQDCSVKICDFGLARTINSDK 185
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPEC 178
R+ + G+ Y+H ILH D+K N+L+ K++DFGLA+ S P
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 185
Query: 179 YKRTPISV 186
Y +++
Sbjct: 186 YXNRVVTL 193
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 136 EPPILHCDIKPQNILM--DEFWTAKISDFG--------LAKLLSDKGCMAPECYKRTPIS 185
E I+HCD+KP+NIL+ + KI DFG + + + + +PE P
Sbjct: 177 ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 186 VKADVYGYGIVLLE 199
+ D++ G +L+E
Sbjct: 237 LAIDMWSLGCILVE 250
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CMA 175
G YLH ++H D+K N+ ++E KI DFGLA + G +A
Sbjct: 133 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 189
Query: 176 PECYKRTPISVKADVYGYGIVL 197
PE + S + DV+ G ++
Sbjct: 190 PEVLSKKGHSFEVDVWSIGCIM 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLA-----------KLLS 169
+ + +L+ H + ++H D+KP+N+L+ + K++DFGLA
Sbjct: 130 ILEAVLHCH---QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 186
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE ++ P D++ G++L
Sbjct: 187 TPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 34/112 (30%)
Query: 118 VRIALDVAKGILYLHDEC-----EPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSD-- 170
+R+A+ A G+ +LH E +P I H D K +N+L+ I+D GLA + S
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 171 -------------KGCMAPE---------CYKRTPISVK-ADVYGYGIVLLE 199
K MAPE C++ S K D++ +G+VL E
Sbjct: 168 DYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFE----SYKWTDIWAFGLVLWE 215
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
KG+ Y+H ++H D+KP N+ ++E KI DFGLA+
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC- 173
Q + +A VA G++YL +H D+ +N L+ + KI DFG+++ +
Sbjct: 158 GQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETI 201
M PE + ++DV+ +G+VL E
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CMA 175
G YLH ++H D+K N+ ++E KI DFGLA + G +A
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 176 PECYKRTPISVKADVYGYGIVL 197
PE + S + DV+ G ++
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIM 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYKRT 182
++A + Y H + ++H DIKP+N+L+ KI+DFG + C AP +RT
Sbjct: 117 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS-------CHAPSS-RRT 165
Query: 183 PISVKAD 189
+S D
Sbjct: 166 TLSGTLD 172
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CMA 175
G YLH ++H D+K N+ ++E KI DFGLA + G +A
Sbjct: 151 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 207
Query: 176 PECYKRTPISVKADVYGYGIVL 197
PE + S + DV+ G ++
Sbjct: 208 PEVLSKKGHSFEVDVWSIGCIM 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CMA 175
G YLH ++H D+K N+ ++E KI DFGLA + G +A
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIA 185
Query: 176 PECYKRTPISVKADVYGYGIVL 197
PE + S + DV+ G ++
Sbjct: 186 PEVLSKKGHSFEVDVWSIGCIM 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK 166
KG+ Y+H ++H D+KP N+ ++E KI DFGLA+
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 21/97 (21%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA-----KISDFGLAKLLS 169
++ V V KG+ ++H E +H D+KP+NI+ F T K+ DFGL L
Sbjct: 149 DEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIM---FTTKRSNELKLIDFGLTAHLD 202
Query: 170 DKGCM----------APECYKRTPISVKADVYGYGIV 196
K + APE + P+ D++ G++
Sbjct: 203 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG---------- 172
+ G YLH ++H D+K N+ ++E KI DFGLA + G
Sbjct: 123 QIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 173 -CMAPECYKRTPISVKADVYGYGIVL 197
+APE + S + DV+ G ++
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIM 205
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI FGLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 14/82 (17%)
Query: 127 GILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG-----------CMA 175
G YLH ++H D+K N+ ++E KI DFGLA + G +A
Sbjct: 153 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIA 209
Query: 176 PECYKRTPISVKADVYGYGIVL 197
PE + S + DV+ G ++
Sbjct: 210 PEVLSKKGHSFEVDVWSIGCIM 231
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 21/97 (21%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTA-----KISDFGLAKLLS 169
++ V V KG+ ++H E +H D+KP+NI+ F T K+ DFGL L
Sbjct: 255 DEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIM---FTTKRSNELKLIDFGLTAHLD 308
Query: 170 DKGCM----------APECYKRTPISVKADVYGYGIV 196
K + APE + P+ D++ G++
Sbjct: 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGL------AKLLS 169
RI V GI Y H + I+H D+KP+N+L++ + +I DFGL +K
Sbjct: 130 RIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXK 186
Query: 170 DK-GC---MAPECYKRTPISVKADVYGYGIVL 197
DK G +APE T K DV+ G++L
Sbjct: 187 DKIGTAYYIAPEVLHGT-YDEKCDVWSTGVIL 217
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 136 EPPILHCDIKPQNILM--DEFWTAKISDFG--------LAKLLSDKGCMAPECYKRTPIS 185
E I+HCD+KP+NIL+ + KI DFG + + + + +PE P
Sbjct: 177 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 186 VKADVYGYGIVLLE 199
+ D++ G +L+E
Sbjct: 237 LAIDMWSLGCILVE 250
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.7 bits (78), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 136 EPPILHCDIKPQNILM--DEFWTAKISDFG--------LAKLLSDKGCMAPECYKRTPIS 185
E I+HCD+KP+NIL+ + KI DFG + + + + +PE P
Sbjct: 158 ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 186 VKADVYGYGIVLLE 199
+ D++ G +L+E
Sbjct: 218 LAIDMWSLGCILVE 231
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 115 NQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC- 173
+Q + IA +A G++YL + +H D+ +N L+ KI DFG+++ +
Sbjct: 133 SQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY 189
Query: 174 ------------MAPECYKRTPISVKADVYGYGIVLLETI 201
M PE + ++DV+ +G++L E
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 35/164 (21%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC---------- 173
+A+G+ YL + +H D+ +N+L+ E +I+DFGLA+ +++
Sbjct: 166 LARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP 222
Query: 174 ---MAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDASKPEEIILTNWVYKCFINR 230
MAPE + ++DV+ +G+++ WE + S Y
Sbjct: 223 VKWMAPEALFDRVYTHQSDVWSFGVLM------WEIFTLGGSP----------YPGIPVE 266
Query: 231 ELNKLVR-GTEVDK-KNLENLVKVGLW-CVQDEPALRPSMKCVV 271
EL KL++ G +DK N N + + + C P+ RP+ K +V
Sbjct: 267 ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ K++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ +++DFGLAK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------APECYKRTPISV-K 187
I+H D+K +N+L+D KI+DFG + + G + APE ++ +
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPE 191
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 192 VDVWSLGVIL 201
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCM----------APECYKRTPISV-K 187
I+H D+K +N+L+D KI+DFG + + G + APE ++ +
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 195 VDVWSLGVIL 204
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 207
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAGY 230
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 104 IFCSAERNPYWNQR--VRIALDVAKGILYLHDECEPPILHCDIKPQNILM---DEFWTAK 158
I ++ ++N+R R+ DVA + +LH + I H D+KP+NIL ++ K
Sbjct: 98 ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVK 154
Query: 159 ISDFGLA 165
I DF L
Sbjct: 155 ICDFDLG 161
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG---CMAPE 177
YLH +++ D+KP+N+L+D+ +++DFG AK + + C PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 205
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGY 228
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG---CMAPE 177
YLH +++ D+KP+N+L+D+ +++DFG AK + + C PE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H E ++H DIKP+N+LM KI+DFG
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI D GLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYKRTPISVKADV 190
++H D+KP N+L+D+ K++DFG + + G + + TP + +V
Sbjct: 195 LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 34.3 bits (77), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLAKLLSDKGCMAP 176
+ DVA + +LH++ I H D+KP+NIL + + KI DFGL + G +P
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H E ++H DIKP+N+LM KI+DFG
Sbjct: 123 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 233
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGY 256
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H E ++H DIKP+N+LM KI+DFG
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 205
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGY 228
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 34.3 bits (77), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 213
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGY 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 233
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGY 256
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI DF LA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 104 IFCSAERNPYWNQ----RVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKI 159
+F +R+P ++ + L A G L L D I+H DIK +NI++ E +T K+
Sbjct: 117 LFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKL 171
Query: 160 SDFGLAKLLS 169
DFG A L
Sbjct: 172 IDFGSAAYLE 181
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC--------- 173
+++ + +LH + I++ D+KP+NI+++ K++DFGL K G
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI 185
Query: 174 --MAPECYKRTPISVKADVYGYGIVLLETIC 202
MAPE R+ + D + G ++ + +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI D GLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+L+D+ +++DFG AK + + +APE
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS 198
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 199 KGYNKAVDWWALGVLIYEMAAGY 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC--------- 173
+++ + +LH + I++ D+KP+NI+++ K++DFGL K G
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185
Query: 174 --MAPECYKRTPISVKADVYGYGIVLLETIC 202
MAPE R+ + D + G ++ + +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDK--GCMAPECYKR 181
+ +G+ Y+H I+H D+KP N+ ++E KI D GLA+ D+ G +A Y+
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 182 TPISVK-------ADVYGYGIVLLETIC 202
I + D++ G ++ E +
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 15/85 (17%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC----------MAPECY 179
YLH +++ D+KP+N+L+D+ +++DFG AK + KG +APE
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEII 231
Query: 180 KRTPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGY 256
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLA-----------KLLS 169
+ + +L+ H + ++H ++KP+N+L+ + K++DFGLA
Sbjct: 119 ILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG 175
Query: 170 DKGCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE ++ P D++ G++L
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPISV-K 187
I+H D+K +N+L+D KI+DFG + + D+ C APE ++ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 194 VDVWSLGVIL 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 142 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILM------DEFWTAKISDFGLA------- 165
+I+ + G+ Y+H C I+H DIKP+N+LM + KI+D G A
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 166 -KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETIC 202
+ + +PE P AD++ ++ E I
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 133 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 170
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 119 RIALDVAKGILYLHDECEPPILHCDIKPQNILM------DEFWTAKISDFGLA------- 165
+I+ + G+ Y+H C I+H DIKP+N+LM + KI+D G A
Sbjct: 135 QISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 166 -KLLSDKGCMAPECYKRTPISVKADVYGYGIVLLETIC 202
+ + +PE P AD++ ++ E I
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 122 LDVAKGILYLHDECEPPILHCDIKPQNI--------LMDEFWTAKISDFGLAKLLSDKGC 173
L++ + YLH +++ D+KP+NI L+D ++I+ FG L G
Sbjct: 189 LEILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY--LYGTPGF 243
Query: 174 MAPECYKRTPISVKADVYGYGIVL 197
APE + P +V D+Y G L
Sbjct: 244 QAPEIVRTGP-TVATDIYTVGRTL 266
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 120 IALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECY 179
IA+D + Y+H DIKP NILMD +++DFG L + G +
Sbjct: 186 IAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA 236
Query: 180 KRTPISVKADV 190
TP + ++
Sbjct: 237 VGTPDYISPEI 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 142 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 121 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 121 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 121 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 130 YLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG--------CMAPECYKR 181
YLH +++ D+KP+N+++D+ +++DFG AK + + +APE
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIIS 212
Query: 182 TPISVKADVYGYGIVLLETICCW 204
+ D + G+++ E +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGY 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 116 QRVRIALDVAKGIL----YLHDECEPPILHCDIKPQNILM--DEFWTAKISDFGLAK 166
QR ++ ++ + I YLH++ I H DIKP+N L ++ + K+ DFGL+K
Sbjct: 165 QREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 118 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 155
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILMD---EFWTAKISDFGLA-KLLSDK-------- 171
+ + +L+ H + ++H D+KP+N+L+ + K++DFGLA ++ D+
Sbjct: 112 ILEAVLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 172 --GCMAPECYKRTPISVKADVYGYGIVL 197
G ++PE ++ D++ G++L
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 121 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGCMAP 176
I+H D+K +N+L+D KI+DFG + + D C AP
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGCMAP 176
I+H D+K +N+L+D KI+DFG + + D C AP
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAP 176
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 117 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 117 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 121 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 113 YWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG 172
++ V +ALD + ++H D+KP N+L+D+ K++DFG ++ +G
Sbjct: 177 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Query: 173 CMAPECYKRTPISVKADV 190
+ + TP + +V
Sbjct: 228 MVRCDTAVGTPDYISPEV 245
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 157
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 113 YWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG 172
++ V +ALD + ++H D+KP N+L+D+ K++DFG ++ +G
Sbjct: 172 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
Query: 173 CMAPECYKRTPISVKADV 190
+ + TP + +V
Sbjct: 223 MVRCDTAVGTPDYISPEV 240
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 115 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 152
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPI-SVK 187
I+H D+K +N+L+D KI+DFG + + D C APE ++ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 194 VDVWSLGVIL 203
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPI-SVK 187
I+H D+K +N+L+D KI+DFG + + D C APE ++ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 194 VDVWSLGVIL 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPI-SVK 187
I+H D+K +N+L+D KI+DFG + + D C APE ++ +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 193
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 194 VDVWSLGVIL 203
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC 173
++H D+KP N+L++ K+ DFGLA+++ +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 140 LHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYKRTPISVKADV 190
+H DIKP N+L+D +++DFG ++D G + TP + ++
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC 173
++H D+KP N+L++ K+ DFGLA+++ +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 116 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGC 173
++H D+KP N+L++ K+ DFGLA+++ +
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 140 LHCDIKPQNILMDEFWTAKISDFGLAKLLSDKGCMAPECYKRTPISVKADV 190
+H DIKP N+L+D +++DFG ++D G + TP + ++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 113 YWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAKLLSDKG 172
++ V +ALD + ++H D+KP N+L+D+ K++DFG ++ +G
Sbjct: 177 FYTAEVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Query: 173 CMAPECYKRTPISVKADV 190
+ + TP + +V
Sbjct: 228 MVRCDTAVGTPDYISPEV 245
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 139 ILHCDIKPQNILMDEF-WTAKISDFGLAKLLS 169
+ H DIKP N+L++E T K+ DFG AK LS
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 113 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 150
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 119 ELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPISV-K 187
I+H D+K +N+L+D KI+DFG + + D C APE ++ +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPE 186
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 187 VDVWSLGVIL 196
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 139 ILHCDIKPQNILMDEFWTAKISDFGLAKLLS-----DKGC-----MAPECYKRTPISV-K 187
I+H D+K +N+L+D KI+DFG + + D C APE ++ +
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPE 194
Query: 188 ADVYGYGIVL 197
DV+ G++L
Sbjct: 195 VDVWSLGVIL 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM----DEFWTAKISDFGLAKLLS 169
+ GI YLH +LH D+KP NIL+ E KI+D G A+L +
Sbjct: 137 ILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 139 ILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
I H DIKPQN+L+D K+ DFG AK+L
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 126 KGILYLHDECEPPILHCDIKPQNILMD-EFWTAKISDFGLAKLL 168
+ + Y+H I H DIKPQN+L+D + K+ DFG AK L
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 136 EPPILHCDIKPQNILMDEFWTAKISDFGLAKLLS 169
E I+H D+KP N L+++ + K+ DFGLA+ ++
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFG 157
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 89 STEAALDLPWDLAYIIFCSAERNPYWNQRVR-----IALDVAKGILYLHDECEPPILHCD 143
TE L L D YI E + +QR R + + V + +L L + I++ D
Sbjct: 129 QTETKLHLILD--YI--NGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRD 184
Query: 144 IKPQNILMDEFWTAKISDFGLAK 166
IK +NIL+D ++DFGL+K
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSK 207
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 139 ILHCDIKPQNILMDEFWTA--KISDFG--------LAKLLSDKGCMAPECYKRTPISVKA 188
I+HCD+KP+NIL+ + + K+ DFG + + + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPI 280
Query: 189 DVYGYGIVLLETICCW 204
D++ G +L E + +
Sbjct: 281 DMWSLGCILAELLTGY 296
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 16/58 (27%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM--------DEFWTAK-----ISDFGLAKLL 168
+A G+ +LH I+H D+KPQNIL+ D+ A+ ISDFGL K L
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 20/84 (23%)
Query: 102 YIIFCSAERN--PYWNQRVRIALDVAKGILYL--------HDE-CEPPILHCDIKPQNIL 150
++IF AE + Y ++ +++ V K LY H C LH D+KPQN+L
Sbjct: 109 HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC----LHRDLKPQNLL 164
Query: 151 M-----DEFWTAKISDFGLAKLLS 169
+ E KI DFGLA+
Sbjct: 165 LSVSDASETPVLKIGDFGLARAFG 188
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 16/58 (27%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM--------DEFWTAK-----ISDFGLAKLL 168
+A G+ +LH I+H D+KPQNIL+ D+ A+ ISDFGL K L
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 123 DVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFG 163
++A + Y H + ++H DIKP+N+L+ KI+DFG
Sbjct: 120 ELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 17/62 (27%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM--------DEFWTAK-----ISDFGLAKLLSD 170
+A G+ +LH I+H D+KPQNIL+ D+ A+ ISDFGL K L D
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL-D 179
Query: 171 KG 172
G
Sbjct: 180 SG 181
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 139 ILHCDIKPQNILMDEFWTA--KISDFG--------LAKLLSDKGCMAPECYKRTPISVKA 188
I+HCD+KP+NIL+ + + K+ DFG + + + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPI 280
Query: 189 DVYGYGIVLLETICCW 204
D++ G +L E + +
Sbjct: 281 DMWSLGCILAELLTGY 296
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 17/62 (27%)
Query: 124 VAKGILYLHDECEPPILHCDIKPQNILM--------DEFWTAK-----ISDFGLAKLLSD 170
+A G+ +LH I+H D+KPQNIL+ D+ A+ ISDFGL K L D
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL-D 179
Query: 171 KG 172
G
Sbjct: 180 SG 181
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 139 ILHCDIKPQNILMDEFWTA--KISDFG--------LAKLLSDKGCMAPECYKRTPISVKA 188
I+HCD+KP+NIL+ + + K+ DFG + + + APE +
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPI 280
Query: 189 DVYGYGIVLLETICCW 204
D++ G +L E + +
Sbjct: 281 DMWSLGCILAELLTGY 296
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 20/115 (17%)
Query: 109 ERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-- 166
E +++ + +AL+ YLH E I++ D+K N+L+D K++D+G+ K
Sbjct: 121 EHARFYSAEISLALN------YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 171
Query: 167 ---------LLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDAS 212
+APE + D + G+++ E + +I S
Sbjct: 172 LRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 226
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 20/115 (17%)
Query: 109 ERNPYWNQRVRIALDVAKGILYLHDECEPPILHCDIKPQNILMDEFWTAKISDFGLAK-- 166
E +++ + +AL+ YLH E I++ D+K N+L+D K++D+G+ K
Sbjct: 153 EHARFYSAEISLALN------YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203
Query: 167 ---------LLSDKGCMAPECYKRTPISVKADVYGYGIVLLETICCWENMEIDAS 212
+APE + D + G+++ E + +I S
Sbjct: 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 128 ILYLHDECEPPILHCDIKPQNILMDEFWTAK---ISDFGLAKLLSD 170
+ ++H + LH DIKP N LM A I DFGLAK D
Sbjct: 116 VEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,684,061
Number of Sequences: 62578
Number of extensions: 292654
Number of successful extensions: 2023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 277
Number of HSP's that attempted gapping in prelim test: 774
Number of HSP's gapped (non-prelim): 1071
length of query: 274
length of database: 14,973,337
effective HSP length: 97
effective length of query: 177
effective length of database: 8,903,271
effective search space: 1575878967
effective search space used: 1575878967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)