Query 048319
Match_columns 348
No_of_seqs 184 out of 1407
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 08:27:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048319.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048319hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 8.9E-65 1.9E-69 517.6 20.8 333 2-348 43-399 (571)
2 TIGR00926 2A1704 Peptide:H+ sy 100.0 1E-47 2.2E-52 398.4 21.2 276 10-347 1-301 (654)
3 COG3104 PTR2 Dipeptide/tripept 100.0 2E-47 4.3E-52 375.9 15.2 282 3-347 28-345 (498)
4 PF00854 PTR2: POT family; In 100.0 7.6E-37 1.7E-41 298.7 1.6 252 62-348 1-273 (372)
5 PRK10207 dipeptide/tripeptide 100.0 1.6E-31 3.4E-36 270.6 20.7 273 2-338 20-310 (489)
6 PRK15462 dipeptide/tripeptide 100.0 3.6E-31 7.7E-36 266.9 21.1 281 2-346 15-328 (493)
7 TIGR00924 yjdL_sub1_fam amino 100.0 2.4E-30 5.2E-35 261.0 20.4 286 2-347 16-333 (475)
8 PRK09584 tppB putative tripept 100.0 2.8E-27 6.1E-32 240.2 19.8 274 2-338 27-317 (500)
9 PF07690 MFS_1: Major Facilita 99.2 5.5E-10 1.2E-14 106.0 14.2 158 3-192 3-167 (352)
10 PRK10054 putative transporter; 99.1 9.3E-10 2E-14 108.4 15.2 157 4-192 15-177 (395)
11 PRK11646 multidrug resistance 99.1 2.3E-09 5E-14 105.8 16.8 159 3-193 17-181 (400)
12 KOG1330 Sugar transporter/spin 99.1 1.7E-10 3.8E-15 113.7 7.8 141 23-195 60-208 (493)
13 TIGR00900 2A0121 H+ Antiporter 99.1 3.5E-09 7.6E-14 100.8 16.3 163 4-194 7-176 (365)
14 PRK15403 multidrug efflux syst 99.0 1.2E-08 2.5E-13 101.3 17.3 157 6-194 17-188 (413)
15 cd06174 MFS The Major Facilita 99.0 1.1E-08 2.4E-13 96.4 16.0 159 3-194 6-171 (352)
16 TIGR00926 2A1704 Peptide:H+ sy 99.0 1E-08 2.2E-13 107.5 16.2 247 25-335 14-275 (654)
17 TIGR00891 2A0112 putative sial 99.0 1.7E-08 3.7E-13 97.8 16.6 157 3-191 19-183 (405)
18 PRK11551 putative 3-hydroxyphe 99.0 1.9E-08 4.2E-13 98.4 16.7 156 4-191 23-184 (406)
19 PRK11102 bicyclomycin/multidru 99.0 1.1E-08 2.4E-13 98.9 14.7 144 19-194 14-163 (377)
20 TIGR00710 efflux_Bcr_CflA drug 99.0 2.3E-08 5.1E-13 96.4 16.8 147 18-196 27-179 (385)
21 PRK15402 multidrug efflux syst 99.0 3.2E-08 7E-13 97.2 17.3 143 20-194 37-185 (406)
22 PRK03545 putative arabinose tr 99.0 1.6E-08 3.5E-13 98.9 15.1 145 18-194 31-181 (390)
23 TIGR00893 2A0114 d-galactonate 98.9 9E-09 2E-13 98.4 12.9 146 17-194 15-166 (399)
24 PRK12382 putative transporter; 98.9 2.6E-08 5.7E-13 97.2 16.0 147 16-187 36-189 (392)
25 TIGR02332 HpaX 4-hydroxyphenyl 98.9 2E-08 4.2E-13 99.6 15.1 146 16-193 28-185 (412)
26 TIGR00711 efflux_EmrB drug res 98.9 1.6E-08 3.5E-13 101.1 14.5 147 16-194 22-174 (485)
27 TIGR00895 2A0115 benzoate tran 98.9 2.8E-08 6.1E-13 95.7 15.0 144 16-191 37-186 (398)
28 TIGR00881 2A0104 phosphoglycer 98.9 1.1E-08 2.3E-13 97.9 11.7 146 16-193 15-167 (379)
29 TIGR00886 2A0108 nitrite extru 98.9 5.3E-08 1.2E-12 93.5 16.2 123 8-162 13-136 (366)
30 PRK14995 methyl viologen resis 98.9 4.5E-08 9.8E-13 99.3 16.3 143 20-193 30-178 (495)
31 PRK12307 putative sialic acid 98.9 4.2E-08 9.1E-13 96.7 15.5 148 9-188 31-184 (426)
32 PRK03893 putative sialic acid 98.9 5.6E-08 1.2E-12 97.8 16.2 149 8-188 32-186 (496)
33 PRK09705 cynX putative cyanate 98.9 5E-08 1.1E-12 95.9 15.2 149 9-190 22-177 (393)
34 PRK05122 major facilitator sup 98.9 8.6E-08 1.9E-12 93.7 16.5 149 16-189 36-191 (399)
35 PRK11652 emrD multidrug resist 98.9 4.6E-08 1E-12 95.6 14.5 142 18-191 30-177 (394)
36 PRK10504 putative transporter; 98.9 7.2E-08 1.6E-12 96.6 16.2 161 5-198 19-186 (471)
37 TIGR00890 2A0111 Oxalate/Forma 98.9 3.3E-08 7.1E-13 94.4 13.2 145 16-193 23-173 (377)
38 TIGR00885 fucP L-fucose:H+ sym 98.9 3.6E-08 7.9E-13 97.9 13.8 106 14-139 20-126 (410)
39 PRK10473 multidrug efflux syst 98.8 7.9E-08 1.7E-12 93.8 15.8 141 20-192 27-173 (392)
40 TIGR00903 2A0129 major facilit 98.8 1.1E-07 2.4E-12 93.1 16.8 142 16-190 11-158 (368)
41 PRK11663 regulatory protein Uh 98.8 6.4E-08 1.4E-12 96.4 15.3 137 21-189 48-190 (434)
42 PRK10213 nepI ribonucleoside t 98.8 4.7E-08 1E-12 96.3 14.1 141 22-194 46-192 (394)
43 TIGR00899 2A0120 sugar efflux 98.8 1.5E-07 3.4E-12 90.5 17.4 160 5-194 6-173 (375)
44 PRK10091 MFS transport protein 98.8 8.6E-08 1.9E-12 93.7 15.6 152 16-199 23-180 (382)
45 PRK10406 alpha-ketoglutarate t 98.8 1.6E-07 3.4E-12 93.5 17.2 159 4-189 33-211 (432)
46 PRK03699 putative transporter; 98.8 1.9E-07 4.1E-12 91.6 17.1 154 7-192 18-178 (394)
47 PRK11043 putative transporter; 98.8 9.4E-08 2E-12 93.6 14.5 140 22-193 32-177 (401)
48 TIGR00879 SP MFS transporter, 98.8 7.2E-08 1.6E-12 94.8 12.8 137 28-193 68-213 (481)
49 PRK10133 L-fucose transporter; 98.8 2.2E-07 4.7E-12 93.1 15.6 100 16-135 46-145 (438)
50 PRK10077 xylE D-xylose transpo 98.7 2E-07 4.3E-12 93.3 14.3 144 26-191 50-209 (479)
51 PRK11273 glpT sn-glycerol-3-ph 98.7 1.9E-07 4.1E-12 93.5 13.9 143 18-189 51-200 (452)
52 PRK09874 drug efflux system pr 98.7 4.2E-07 9E-12 88.7 15.7 156 4-193 22-189 (408)
53 TIGR00896 CynX cyanate transpo 98.7 1.7E-07 3.8E-12 90.2 12.7 153 7-193 10-171 (355)
54 PLN00028 nitrate transmembrane 98.7 5.5E-07 1.2E-11 91.0 16.5 152 7-191 47-213 (476)
55 TIGR00883 2A0106 metabolite-pr 98.7 9E-07 2E-11 84.9 17.2 165 2-193 2-187 (394)
56 PRK10489 enterobactin exporter 98.7 1.6E-07 3.5E-12 92.7 12.2 150 18-194 39-194 (417)
57 TIGR01299 synapt_SV2 synaptic 98.7 3.5E-07 7.5E-12 97.3 15.3 100 16-138 187-286 (742)
58 PRK11195 lysophospholipid tran 98.7 8.5E-07 1.8E-11 87.3 17.1 134 22-190 29-167 (393)
59 TIGR00882 2A0105 oligosacchari 98.7 7E-07 1.5E-11 87.5 16.4 161 4-191 10-177 (396)
60 PRK09528 lacY galactoside perm 98.7 3.7E-07 7.9E-12 90.3 14.3 73 4-77 18-91 (420)
61 PRK03633 putative MFS family t 98.7 8.9E-07 1.9E-11 86.4 16.9 137 4-173 14-154 (381)
62 TIGR00901 2A0125 AmpG-related 98.7 8.2E-07 1.8E-11 85.4 16.3 149 16-194 8-175 (356)
63 TIGR00890 2A0111 Oxalate/Forma 98.7 5.2E-07 1.1E-11 86.1 14.8 150 10-190 219-375 (377)
64 TIGR00898 2A0119 cation transp 98.7 2.8E-07 6.2E-12 93.1 13.6 140 22-193 115-260 (505)
65 TIGR00712 glpT glycerol-3-phos 98.7 3.6E-07 7.9E-12 91.0 14.1 144 19-191 50-200 (438)
66 PRK05122 major facilitator sup 98.7 4.6E-07 9.9E-12 88.6 14.5 163 9-206 229-398 (399)
67 PRK03699 putative transporter; 98.6 5.7E-07 1.2E-11 88.2 13.5 153 6-191 215-374 (394)
68 PRK15011 sugar efflux transpor 98.6 2E-06 4.4E-11 84.4 17.2 159 3-194 22-191 (393)
69 TIGR00892 2A0113 monocarboxyla 98.6 5.7E-07 1.2E-11 90.4 13.5 144 19-195 42-192 (455)
70 TIGR00792 gph sugar (Glycoside 98.6 7E-07 1.5E-11 88.2 13.7 167 6-196 9-193 (437)
71 TIGR00897 2A0118 polyol permea 98.6 3E-06 6.4E-11 83.4 18.1 125 9-162 26-151 (402)
72 cd06174 MFS The Major Facilita 98.6 1.8E-06 4E-11 81.2 15.9 159 4-194 183-349 (352)
73 TIGR01301 GPH_sucrose GPH fami 98.6 7.7E-07 1.7E-11 90.2 13.5 170 16-200 25-221 (477)
74 PRK09705 cynX putative cyanate 98.5 3.2E-06 7E-11 83.1 16.3 157 6-195 215-379 (393)
75 TIGR00894 2A0114euk Na(+)-depe 98.5 6.9E-07 1.5E-11 89.5 11.4 137 25-191 70-213 (465)
76 PRK10642 proline/glycine betai 98.5 2.8E-06 6.1E-11 86.1 15.8 150 16-189 36-205 (490)
77 TIGR00887 2A0109 phosphate:H+ 98.5 3.2E-06 6.9E-11 85.9 16.0 148 27-200 52-230 (502)
78 PRK08633 2-acyl-glycerophospho 98.5 2.9E-06 6.2E-11 94.1 16.9 139 4-171 17-161 (1146)
79 PRK09952 shikimate transporter 98.5 3.4E-06 7.3E-11 84.3 15.7 164 4-195 258-431 (438)
80 TIGR00899 2A0120 sugar efflux 98.5 3.2E-06 7E-11 81.3 14.6 146 16-194 220-371 (375)
81 PRK15075 citrate-proton sympor 98.5 3.4E-06 7.5E-11 83.9 15.1 155 3-184 25-199 (434)
82 PRK10642 proline/glycine betai 98.4 5.4E-06 1.2E-10 84.0 16.0 146 7-181 261-414 (490)
83 PRK09556 uhpT sugar phosphate 98.4 7.9E-07 1.7E-11 89.4 9.8 144 19-189 52-204 (467)
84 PRK11902 ampG muropeptide tran 98.4 8.1E-06 1.8E-10 80.3 16.7 147 16-193 20-178 (402)
85 TIGR00805 oat sodium-independe 98.4 6.8E-07 1.5E-11 93.8 8.7 171 13-193 49-277 (633)
86 COG0738 FucP Fucose permease [ 98.4 4.7E-06 1E-10 81.5 13.7 107 16-142 33-139 (422)
87 PRK09874 drug efflux system pr 98.4 6.5E-06 1.4E-10 80.3 14.6 149 16-196 240-397 (408)
88 PRK09556 uhpT sugar phosphate 98.4 1E-05 2.2E-10 81.4 15.7 70 6-76 268-338 (467)
89 TIGR00880 2_A_01_02 Multidrug 98.4 3.6E-06 7.9E-11 68.4 10.2 122 41-194 8-135 (141)
90 PTZ00207 hypothetical protein; 98.4 5.6E-06 1.2E-10 85.9 13.9 144 16-187 47-195 (591)
91 PRK15011 sugar efflux transpor 98.4 1.2E-05 2.7E-10 78.8 15.7 147 16-195 237-389 (393)
92 PRK09952 shikimate transporter 98.4 1.6E-05 3.4E-10 79.4 16.7 119 46-188 79-211 (438)
93 COG2814 AraJ Arabinose efflux 98.4 1.1E-05 2.3E-10 79.6 15.0 145 22-198 39-189 (394)
94 TIGR00893 2A0114 d-galactonate 98.3 1.5E-05 3.2E-10 76.1 15.4 163 5-194 224-396 (399)
95 PRK03893 putative sialic acid 98.3 7.1E-06 1.5E-10 82.6 13.7 141 16-186 296-442 (496)
96 TIGR00883 2A0106 metabolite-pr 98.3 4.9E-06 1.1E-10 79.8 11.8 153 4-185 227-389 (394)
97 PRK10489 enterobactin exporter 98.3 7.9E-06 1.7E-10 80.6 13.5 151 13-195 240-397 (417)
98 TIGR00892 2A0113 monocarboxyla 98.3 1.3E-05 2.8E-10 80.6 15.0 156 8-195 253-419 (455)
99 PRK06814 acylglycerophosphoeth 98.3 1.7E-05 3.6E-10 88.4 17.3 127 33-190 54-188 (1140)
100 PRK03633 putative MFS family t 98.3 1.6E-05 3.4E-10 77.6 15.2 143 16-194 221-369 (381)
101 PRK12382 putative transporter; 98.3 1.1E-05 2.4E-10 78.8 13.9 151 10-195 230-387 (392)
102 TIGR00879 SP MFS transporter, 98.3 1.3E-05 2.8E-10 78.8 14.1 153 20-194 308-467 (481)
103 PRK11551 putative 3-hydroxyphe 98.3 2.5E-05 5.3E-10 76.5 16.0 148 11-191 235-390 (406)
104 PRK11010 ampG muropeptide tran 98.3 3.7E-05 8.1E-10 78.2 17.7 158 5-193 21-191 (491)
105 PRK11273 glpT sn-glycerol-3-ph 98.3 2.1E-05 4.5E-10 78.8 15.3 157 6-191 263-429 (452)
106 TIGR00889 2A0110 nucleoside tr 98.2 2.8E-05 6.1E-10 77.3 15.2 150 16-194 229-399 (418)
107 TIGR00891 2A0112 putative sial 98.2 1.6E-05 3.4E-10 77.0 13.1 136 16-182 259-401 (405)
108 PRK15075 citrate-proton sympor 98.2 2.9E-05 6.2E-10 77.3 15.1 112 7-139 249-363 (434)
109 PRK09669 putative symporter Ya 98.2 2.2E-05 4.8E-10 78.3 14.2 153 16-192 30-199 (444)
110 TIGR00792 gph sugar (Glycoside 98.2 1.6E-05 3.5E-10 78.5 13.0 164 5-194 231-417 (437)
111 PRK03545 putative arabinose tr 98.2 5.4E-05 1.2E-09 74.0 16.5 156 7-195 216-378 (390)
112 KOG0254 Predicted transporter 98.2 1E-05 2.3E-10 82.5 11.8 139 32-203 90-238 (513)
113 PRK09848 glucuronide transport 98.2 6.3E-05 1.4E-09 75.1 16.9 114 9-138 21-140 (448)
114 KOG0255 Synaptic vesicle trans 98.2 1.2E-05 2.6E-10 82.0 11.8 149 24-202 111-262 (521)
115 PF13347 MFS_2: MFS/sugar tran 98.2 1.6E-05 3.4E-10 79.0 12.4 118 3-142 232-350 (428)
116 PRK10429 melibiose:sodium symp 98.2 3.8E-05 8.3E-10 77.5 15.3 166 9-198 19-202 (473)
117 TIGR00806 rfc RFC reduced fola 98.2 1.8E-05 4E-10 79.7 12.6 143 17-192 47-198 (511)
118 KOG3764 Vesicular amine transp 98.2 1.8E-05 3.9E-10 77.5 11.7 160 25-215 100-268 (464)
119 PRK11010 ampG muropeptide tran 98.2 4.9E-05 1.1E-09 77.3 15.7 162 8-197 234-403 (491)
120 PRK15402 multidrug efflux syst 98.2 9.9E-05 2.1E-09 72.4 17.4 138 10-172 229-367 (406)
121 PF05977 MFS_3: Transmembrane 98.2 4.4E-05 9.6E-10 78.4 15.1 148 25-199 39-192 (524)
122 PRK10133 L-fucose transporter; 98.1 3.8E-05 8.2E-10 76.9 14.0 153 8-192 270-428 (438)
123 TIGR00788 fbt folate/biopterin 98.1 7.4E-05 1.6E-09 75.6 16.1 157 4-191 34-203 (468)
124 TIGR01272 gluP glucose/galacto 98.1 3.4E-05 7.3E-10 73.8 12.8 136 16-187 161-305 (310)
125 PRK10406 alpha-ketoglutarate t 98.1 4E-05 8.7E-10 76.2 13.9 158 9-194 256-421 (432)
126 PRK11663 regulatory protein Uh 98.1 7.6E-05 1.6E-09 74.3 15.6 155 9-194 256-421 (434)
127 PF06609 TRI12: Fungal trichot 98.1 7.8E-05 1.7E-09 77.4 16.0 145 16-192 64-212 (599)
128 PRK09528 lacY galactoside perm 98.1 4.2E-05 9.1E-10 75.6 13.5 147 16-194 244-400 (420)
129 TIGR00710 efflux_Bcr_CflA drug 98.1 8E-05 1.7E-09 71.7 14.7 108 11-136 221-329 (385)
130 PRK11462 putative transporter; 98.1 0.00016 3.5E-09 72.9 17.0 158 16-197 30-204 (460)
131 TIGR00901 2A0125 AmpG-related 98.1 5.2E-05 1.1E-09 72.9 12.5 136 5-162 218-355 (356)
132 PRK10077 xylE D-xylose transpo 98.0 0.00024 5.2E-09 71.1 17.4 145 21-193 296-453 (479)
133 PRK09848 glucuronide transport 98.0 6.8E-05 1.5E-09 74.9 13.3 166 5-194 237-425 (448)
134 PF11700 ATG22: Vacuole efflux 98.0 0.00011 2.4E-09 74.6 14.8 160 11-194 296-465 (477)
135 PRK14995 methyl viologen resis 98.0 7.1E-05 1.5E-09 76.0 13.3 114 4-137 267-381 (495)
136 TIGR00897 2A0118 polyol permea 98.0 0.00016 3.4E-09 71.2 15.4 160 5-194 231-398 (402)
137 PF13347 MFS_2: MFS/sugar tran 98.0 2E-05 4.3E-10 78.3 9.0 173 7-199 12-200 (428)
138 TIGR00711 efflux_EmrB drug res 98.0 6.9E-05 1.5E-09 74.9 12.7 113 6-137 265-378 (485)
139 TIGR01299 synapt_SV2 synaptic 98.0 4E-05 8.7E-10 81.7 11.3 124 39-194 603-731 (742)
140 PRK10091 MFS transport protein 98.0 0.00016 3.6E-09 70.5 14.7 151 16-195 220-374 (382)
141 TIGR02718 sider_RhtX_FptX side 98.0 0.00022 4.8E-09 69.7 14.9 160 6-191 218-385 (390)
142 COG2271 UhpC Sugar phosphate p 98.0 0.00026 5.6E-09 69.9 15.1 159 10-194 266-431 (448)
143 PRK10504 putative transporter; 97.9 0.00028 6E-09 70.7 15.6 137 5-170 270-410 (471)
144 TIGR00889 2A0110 nucleoside tr 97.9 0.00055 1.2E-08 68.1 17.7 66 16-81 23-88 (418)
145 PLN00028 nitrate transmembrane 97.9 0.00013 2.8E-09 73.9 13.1 49 13-62 269-318 (476)
146 TIGR00902 2A0127 phenyl propri 97.9 0.0003 6.5E-09 68.7 15.1 157 5-193 214-375 (382)
147 PRK11102 bicyclomycin/multidru 97.9 0.00035 7.5E-09 67.4 15.3 55 20-75 219-273 (377)
148 PRK11128 putative 3-phenylprop 97.9 0.00039 8.5E-09 67.8 15.7 138 17-191 26-173 (382)
149 TIGR00712 glpT glycerol-3-phos 97.9 0.00025 5.4E-09 70.6 14.3 159 7-195 262-431 (438)
150 TIGR00900 2A0121 H+ Antiporter 97.9 0.00021 4.5E-09 67.8 13.0 126 6-162 220-347 (365)
151 PRK15034 nitrate/nitrite trans 97.9 0.00049 1.1E-08 69.6 16.1 119 16-162 54-173 (462)
152 TIGR00881 2A0104 phosphoglycer 97.8 0.00021 4.5E-09 68.1 12.4 142 9-179 229-379 (379)
153 TIGR02332 HpaX 4-hydroxyphenyl 97.8 0.00027 5.9E-09 70.0 13.4 149 5-185 251-409 (412)
154 PF05631 DUF791: Protein of un 97.8 0.00076 1.6E-08 65.5 15.8 143 24-195 62-214 (354)
155 TIGR00902 2A0127 phenyl propri 97.8 0.00066 1.4E-08 66.3 15.7 139 16-191 25-173 (382)
156 KOG0569 Permease of the major 97.8 0.00015 3.3E-09 73.4 10.9 142 34-202 63-212 (485)
157 TIGR00896 CynX cyanate transpo 97.8 0.00036 7.9E-09 67.1 13.1 108 6-137 207-315 (355)
158 TIGR00895 2A0115 benzoate tran 97.8 0.00033 7.1E-09 67.3 12.5 130 7-169 261-394 (398)
159 PRK12307 putative sialic acid 97.8 0.00052 1.1E-08 67.6 14.1 127 16-173 252-381 (426)
160 COG2223 NarK Nitrate/nitrite t 97.8 0.00053 1.2E-08 67.6 13.7 71 11-82 233-304 (417)
161 PRK08633 2-acyl-glycerophospho 97.8 0.00041 9E-09 77.1 14.7 119 12-162 248-368 (1146)
162 COG2814 AraJ Arabinose efflux 97.7 0.00058 1.3E-08 67.4 13.8 160 10-202 225-391 (394)
163 KOG2532 Permease of the major 97.7 0.00014 3E-09 73.7 9.3 140 25-194 67-213 (466)
164 PRK10429 melibiose:sodium symp 97.7 0.00038 8.2E-09 70.3 12.1 165 8-194 243-430 (473)
165 PRK11902 ampG muropeptide tran 97.7 0.00085 1.8E-08 65.9 14.1 145 20-193 234-386 (402)
166 TIGR00894 2A0114euk Na(+)-depe 97.7 0.0014 3E-08 65.7 15.8 56 4-59 269-325 (465)
167 PF07690 MFS_1: Major Facilita 97.6 0.00034 7.4E-09 66.1 10.3 124 10-162 220-345 (352)
168 PRK09669 putative symporter Ya 97.6 0.0009 1.9E-08 66.8 13.7 103 36-162 269-372 (444)
169 PRK10213 nepI ribonucleoside t 97.5 0.0028 6E-08 62.4 15.4 147 10-189 230-383 (394)
170 TIGR00886 2A0108 nitrite extru 97.5 0.0016 3.4E-08 62.4 12.8 109 10-137 239-348 (366)
171 COG2271 UhpC Sugar phosphate p 97.5 0.00049 1.1E-08 68.0 8.9 147 20-198 53-208 (448)
172 PRK11128 putative 3-phenylprop 97.5 0.0033 7.1E-08 61.3 14.7 145 10-189 219-371 (382)
173 KOG4686 Predicted sugar transp 97.5 0.0015 3.2E-08 61.9 11.4 140 20-193 289-438 (459)
174 PRK06814 acylglycerophosphoeth 97.4 0.0016 3.6E-08 72.6 13.8 167 6-185 235-410 (1140)
175 PRK11043 putative transporter; 97.4 0.0066 1.4E-07 59.3 16.0 108 11-137 218-326 (401)
176 COG2807 CynX Cyanate permease 97.4 0.0041 8.8E-08 60.6 13.8 166 8-202 220-391 (395)
177 PRK15034 nitrate/nitrite trans 97.4 0.008 1.7E-07 60.9 16.7 109 11-138 267-376 (462)
178 PRK10054 putative transporter; 97.4 0.0027 5.8E-08 62.5 13.0 159 16-209 227-392 (395)
179 TIGR00882 2A0105 oligosacchari 97.4 0.0022 4.9E-08 62.7 12.3 143 18-192 238-390 (396)
180 PRK11462 putative transporter; 97.4 0.0042 9.1E-08 62.7 14.6 114 5-140 237-351 (460)
181 TIGR00887 2A0109 phosphate:H+ 97.4 0.0021 4.6E-08 65.3 12.5 70 10-81 302-384 (502)
182 KOG2504 Monocarboxylate transp 97.3 0.0039 8.5E-08 63.9 14.1 159 6-198 52-222 (509)
183 PRK10473 multidrug efflux syst 97.3 0.0063 1.4E-07 59.3 15.0 62 20-82 228-289 (392)
184 PF00083 Sugar_tr: Sugar (and 97.3 9.1E-06 2E-10 80.7 -5.4 143 31-202 46-199 (451)
185 PRK11646 multidrug resistance 97.3 0.0037 8E-08 61.6 13.1 143 18-192 231-383 (400)
186 COG2223 NarK Nitrate/nitrite t 97.3 0.0051 1.1E-07 60.8 13.6 155 13-199 30-195 (417)
187 COG2211 MelB Na+/melibiose sym 97.3 0.0041 8.8E-08 62.8 13.2 105 16-141 257-361 (467)
188 PF05977 MFS_3: Transmembrane 97.3 0.0052 1.1E-07 63.3 14.3 148 16-195 239-392 (524)
189 TIGR02718 sider_RhtX_FptX side 97.3 0.0079 1.7E-07 58.7 14.9 62 7-70 12-77 (390)
190 PRK11195 lysophospholipid tran 97.3 0.0068 1.5E-07 59.6 14.4 144 16-191 226-374 (393)
191 KOG2532 Permease of the major 97.2 0.0048 1E-07 62.6 12.7 58 3-60 265-323 (466)
192 COG2270 Permeases of the major 97.2 0.0027 5.8E-08 62.9 10.4 144 20-195 277-427 (438)
193 TIGR00898 2A0119 cation transp 97.1 0.0051 1.1E-07 62.1 12.2 119 43-191 367-489 (505)
194 TIGR00885 fucP L-fucose:H+ sym 97.1 0.0093 2E-07 59.2 13.8 142 14-189 250-404 (410)
195 PF12832 MFS_1_like: MFS_1 lik 97.0 0.0038 8.3E-08 47.3 7.8 62 10-72 10-75 (77)
196 PF03209 PUCC: PUCC protein; 97.0 0.018 3.8E-07 57.0 13.7 151 16-194 220-395 (403)
197 PF03825 Nuc_H_symport: Nucleo 96.9 0.052 1.1E-06 54.0 16.9 69 10-79 15-85 (400)
198 COG2211 MelB Na+/melibiose sym 96.7 0.052 1.1E-06 54.9 15.3 123 16-162 33-159 (467)
199 COG2807 CynX Cyanate permease 96.7 0.038 8.2E-07 54.0 13.6 154 9-196 25-185 (395)
200 PF06813 Nodulin-like: Nodulin 96.7 0.056 1.2E-06 50.3 14.1 63 20-84 26-88 (250)
201 PF01306 LacY_symp: LacY proto 96.6 0.019 4.1E-07 57.2 11.3 57 13-70 23-81 (412)
202 KOG0252 Inorganic phosphate tr 96.5 0.016 3.4E-07 58.2 9.6 92 28-135 81-172 (538)
203 TIGR00903 2A0129 major facilit 96.5 0.078 1.7E-06 51.9 14.5 154 3-192 199-360 (368)
204 TIGR00924 yjdL_sub1_fam amino 96.5 0.028 6.1E-07 57.0 11.7 126 53-200 338-471 (475)
205 KOG0569 Permease of the major 96.4 0.074 1.6E-06 54.2 14.2 62 22-84 296-357 (485)
206 KOG2504 Monocarboxylate transp 96.4 0.037 8E-07 56.8 12.2 159 8-197 310-476 (509)
207 KOG2533 Permease of the major 96.4 0.016 3.4E-07 59.3 9.3 137 25-193 75-223 (495)
208 PRK15403 multidrug efflux syst 96.4 0.057 1.2E-06 53.4 13.2 139 9-172 231-370 (413)
209 PF03092 BT1: BT1 family; Int 96.2 0.054 1.2E-06 54.4 12.1 148 17-190 11-168 (433)
210 PRK11652 emrD multidrug resist 96.2 0.17 3.6E-06 49.2 14.8 98 20-137 232-329 (394)
211 KOG2533 Permease of the major 95.9 0.03 6.5E-07 57.2 8.4 81 2-82 279-364 (495)
212 PRK10207 dipeptide/tripeptide 95.5 0.1 2.2E-06 53.2 10.7 167 11-200 284-479 (489)
213 COG0477 ProP Permeases of the 95.5 0.4 8.6E-06 42.7 13.4 93 25-138 31-125 (338)
214 KOG0253 Synaptic vesicle trans 95.3 1.1 2.4E-05 44.3 16.2 170 24-229 106-282 (528)
215 KOG2615 Permease of the major 95.2 0.38 8.2E-06 47.5 12.5 88 29-140 66-153 (451)
216 KOG2563 Permease of the major 94.9 0.94 2E-05 45.6 14.7 71 17-89 66-136 (480)
217 PF03137 OATP: Organic Anion T 94.6 0.0071 1.5E-07 62.5 -0.8 78 5-84 12-90 (539)
218 PTZ00207 hypothetical protein; 94.1 0.21 4.5E-06 52.3 8.6 134 25-192 382-547 (591)
219 KOG3626 Organic anion transpor 94.0 0.27 5.8E-06 52.3 9.2 174 14-197 114-343 (735)
220 KOG1237 H+/oligopeptide sympor 93.6 0.03 6.4E-07 58.3 1.2 125 35-194 10-134 (571)
221 TIGR00805 oat sodium-independe 93.2 0.32 6.9E-06 51.3 8.2 75 3-78 337-415 (633)
222 PF03825 Nuc_H_symport: Nucleo 93.1 2.6 5.6E-05 41.9 14.2 157 17-197 229-395 (400)
223 COG0738 FucP Fucose permease [ 93.1 1.1 2.4E-05 44.5 11.2 143 10-188 246-401 (422)
224 PRK09584 tppB putative tripept 92.8 1.6 3.5E-05 44.6 12.5 124 52-198 341-480 (500)
225 PF06779 DUF1228: Protein of u 92.7 0.92 2E-05 35.1 8.0 71 8-82 7-77 (85)
226 KOG0254 Predicted transporter 92.7 1.5 3.3E-05 44.7 12.2 56 26-83 325-380 (513)
227 KOG4686 Predicted sugar transp 91.7 0.0072 1.6E-07 57.3 -5.6 90 16-124 64-153 (459)
228 KOG2816 Predicted transporter 91.2 3 6.5E-05 42.4 12.2 157 3-194 25-196 (463)
229 KOG4332 Predicted sugar transp 91.2 0.15 3.2E-06 48.2 2.5 166 21-216 62-239 (454)
230 KOG0253 Synaptic vesicle trans 90.3 1.6 3.4E-05 43.3 8.7 34 47-81 397-430 (528)
231 TIGR00788 fbt folate/biopterin 89.7 1.6 3.5E-05 44.2 8.8 126 24-172 281-410 (468)
232 PF00083 Sugar_tr: Sugar (and 89.1 0.013 2.7E-07 58.2 -7.0 57 21-80 278-334 (451)
233 PF03209 PUCC: PUCC protein; 87.9 9.4 0.0002 38.1 12.4 162 23-201 7-184 (403)
234 TIGR01272 gluP glucose/galacto 87.2 1.5 3.2E-05 41.8 6.3 36 105-140 8-43 (310)
235 KOG3762 Predicted transporter 85.7 2 4.4E-05 44.3 6.5 64 16-81 32-95 (618)
236 PF11700 ATG22: Vacuole efflux 84.4 28 0.00061 35.5 14.3 39 42-81 81-120 (477)
237 KOG0637 Sucrose transporter an 80.9 3.4 7.4E-05 41.8 5.8 145 16-173 53-203 (498)
238 PF05978 UNC-93: Ion channel r 80.7 13 0.00029 31.9 8.8 76 30-133 40-115 (156)
239 PF01770 Folate_carrier: Reduc 78.6 40 0.00087 33.8 12.6 146 17-192 25-177 (412)
240 TIGR01301 GPH_sucrose GPH fami 77.3 50 0.0011 33.8 13.1 142 46-198 320-472 (477)
241 KOG2816 Predicted transporter 77.0 19 0.0004 36.7 9.9 113 18-162 264-376 (463)
242 PRK03612 spermidine synthase; 75.2 42 0.00092 34.6 12.2 47 16-62 35-81 (521)
243 COG2270 Permeases of the major 74.2 87 0.0019 31.6 13.4 106 16-140 36-148 (438)
244 KOG3764 Vesicular amine transp 67.2 24 0.00052 35.4 7.7 91 107-200 361-457 (464)
245 KOG4332 Predicted sugar transp 66.7 57 0.0012 31.3 9.7 74 109-191 346-425 (454)
246 KOG2563 Permease of the major 61.5 51 0.0011 33.5 8.9 57 25-81 295-352 (480)
247 KOG3098 Uncharacterized conser 56.9 1.2E+02 0.0025 31.0 10.8 56 46-125 65-120 (461)
248 PF06609 TRI12: Fungal trichot 54.4 71 0.0015 33.7 9.0 78 4-82 318-400 (599)
249 KOG2615 Permease of the major 54.1 1E+02 0.0022 31.0 9.4 94 23-138 289-383 (451)
250 KOG3626 Organic anion transpor 50.1 41 0.0009 36.2 6.5 75 2-76 398-475 (735)
251 PF01306 LacY_symp: LacY proto 49.2 2.9E+02 0.0063 27.7 13.6 66 16-83 241-310 (412)
252 KOG1330 Sugar transporter/spin 48.9 79 0.0017 32.3 8.0 36 23-58 275-310 (493)
253 KOG3098 Uncharacterized conser 41.0 4.1E+02 0.0089 27.1 13.3 87 48-138 296-384 (461)
254 PF06963 FPN1: Ferroportin1 (F 37.8 1.8E+02 0.004 29.3 8.8 104 16-134 279-383 (432)
255 COG5336 Uncharacterized protei 36.5 1E+02 0.0022 25.0 5.3 48 31-79 43-90 (116)
256 KOG0252 Inorganic phosphate tr 34.6 57 0.0012 33.5 4.4 71 9-81 317-397 (538)
257 PF14007 YtpI: YtpI-like prote 32.1 52 0.0011 25.6 3.0 30 176-205 57-86 (89)
258 PF03137 OATP: Organic Anion T 31.8 15 0.00034 38.0 0.0 74 5-78 314-390 (539)
259 KOG3097 Predicted membrane pro 31.5 2.3E+02 0.0049 28.0 7.8 57 11-74 44-100 (390)
260 KOG2325 Predicted transporter/ 31.1 2.5E+02 0.0054 28.9 8.5 89 26-134 66-156 (488)
261 PF06645 SPC12: Microsomal sig 30.2 65 0.0014 24.2 3.2 38 167-204 25-63 (76)
262 COG3619 Predicted membrane pro 25.2 5.3E+02 0.012 23.6 13.5 21 119-139 140-160 (226)
263 PRK13747 putative mercury resi 24.8 1.4E+02 0.0031 22.4 4.0 51 138-191 5-68 (78)
264 PF09527 ATPase_gene1: Putativ 24.7 2.4E+02 0.0051 19.3 5.7 29 43-71 12-40 (55)
265 PF06800 Sugar_transport: Suga 23.8 6.2E+02 0.013 23.9 11.9 150 18-196 28-185 (269)
266 PF11027 DUF2615: Protein of u 23.5 1.2E+02 0.0025 24.4 3.6 28 176-203 53-80 (103)
267 PF06645 SPC12: Microsomal sig 22.8 3.3E+02 0.0072 20.3 6.0 30 29-58 5-34 (76)
268 PF11744 ALMT: Aluminium activ 22.3 7.7E+02 0.017 24.7 10.0 62 49-125 78-140 (406)
269 PRK02237 hypothetical protein; 22.1 3.7E+02 0.008 21.8 6.2 50 31-81 56-105 (109)
270 PF02694 UPF0060: Uncharacteri 21.4 2.6E+02 0.0057 22.5 5.2 53 28-81 51-103 (107)
271 KOG0255 Synaptic vesicle trans 20.5 8.7E+02 0.019 24.3 12.9 53 26-82 348-400 (521)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-65 Score=517.60 Aligned_cols=333 Identities=31% Similarity=0.433 Sum_probs=302.3
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
...|.+||++|||+ .||+.|+++.+|.+.+.|+..+++|.|.++++|++||++||.|+|||+||.++++++.+|..+++
T Consensus 43 l~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 43 LGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-CccCCCCCCC--CCCCCccc--ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHH
Q 048319 81 MSTP-PVLAGFVGTC--SEYKPECI--VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFK 155 (348)
Q Consensus 81 ~s~~-p~~~~~~~~c--~~~~~~c~--~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~ 155 (348)
+++. |.++| ++| ......|+ ++.+...+|.+|+++++|+||+|||+.+|||||||+.+++|++.+ .+|||
T Consensus 123 ~~a~~~~l~p--~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~---~~fFn 197 (571)
T KOG1237|consen 123 LSAMIPALLP--FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGI---PSFFN 197 (571)
T ss_pred HHHHhhhcCC--ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCc---ccchh
Confidence 9988 88888 665 22334566 677899999999999999999999999999999999999988888 99999
Q ss_pred HHHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccCCCCCCchhHHHHHHHHHHhhccCCCC
Q 048319 156 LLLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENKEPEGSPLTSVFRVFVASTTKLFYRLP 229 (348)
Q Consensus 156 ~~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~l~~~~~V~~~a~~~~~~~~~ 229 (348)
|||+.+| +++.++.+|+| ||.++|++|+++|++++++|+.|++.|++++|.|||++++.||+++|++||+.+.+
T Consensus 198 W~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~ 277 (571)
T KOG1237|consen 198 WFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVS 277 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCC
Confidence 9999999 89999999998 99999999999999999999999999999999999999999999999999998887
Q ss_pred CCCcccccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhhhhHHHHHHH
Q 048319 230 SDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRMIPICLTFII 309 (348)
Q Consensus 230 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~lpif~~~ii 309 (348)
.+++.+ +.. ..+....+++++++++|||+++.+++..++...+||++|+++||||+|+++|++|+|++.++
T Consensus 278 ~~~~~~-~~~--------~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~ 348 (571)
T KOG1237|consen 278 LDPEEL-YYD--------CTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTII 348 (571)
T ss_pred Ccchhc-ccc--------ccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHHHH
Confidence 764433 111 11123345678999999999887665545567899999999999999999999999999999
Q ss_pred HHHhhcccchHHHHHHHHhccCcCC-eeee-----------eEEEEeeccC
Q 048319 310 PGVVSSIGNTYFVEQADLLNKKVGN-LKAT-----------TVILLPYYNN 348 (348)
Q Consensus 310 ~~~~~~Q~~t~~v~Qa~~md~~ig~-f~iP-----------ili~iPi~d~ 348 (348)
||++++|+.|++++||.+|||++++ |++| +++++|+|||
T Consensus 349 ~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr 399 (571)
T KOG1237|consen 349 YSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDR 399 (571)
T ss_pred HHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcce
Confidence 9999999999999999999999986 9999 9999999997
No 2
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=100.00 E-value=1e-47 Score=398.38 Aligned_cols=276 Identities=22% Similarity=0.371 Sum_probs=241.6
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
|+|||+ ++|++|+++.+|++++.|+.+++.|.+++|++|++||++||+++||||||+++.+++.+|++++++++.|...
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 689999 9999999999999999999999999999999999999999999999999999999999999999997764321
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
. ..+...++++|+++++|+|++|||++++++|||+++++ +++ +++|+||||++| +++
T Consensus 81 ~--------------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~---~s~F~~fY~~iNiGSlis 140 (654)
T TIGR00926 81 H--------------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLR---SRFFSFFYFAINAGSLIS 140 (654)
T ss_pred c--------------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHH---HHHHHHHHHHHHHHHHHH
Confidence 1 12456688999999999999999999999999987543 346 999999999999 777
Q ss_pred chhhcccc----------cchhhHHHHHHHHHHHHHHHHhcCcccccCCCCCCchhHHHHHHHHHHhhccCCCCCCCccc
Q 048319 166 IIPISYIK----------PWNLRFGVSAICTVIATLLFLSGTCTYENKEPEGSPLTSVFRVFVASTTKLFYRLPSDASEL 235 (348)
Q Consensus 166 ~~~~~yi~----------g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~l~~~~~V~~~a~~~~~~~~~~~~~~l 235 (348)
.+++++++ ||+++|++|+++|++++++|+.++++|++++|+|+++.++.++++.+.|+|+...+.
T Consensus 141 ~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~----- 215 (654)
T TIGR00926 141 TIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE----- 215 (654)
T ss_pred HHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-----
Confidence 78888875 499999999999999999999999999999999999999999999988775432110
Q ss_pred ccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhhhhHHHHHHHHHHhhc
Q 048319 236 YEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRMIPICLTFIIPGVVSS 315 (348)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~lpif~~~ii~~~~~~ 315 (348)
+ ...+|+|+++... ++++|||+|++++++|+|+..++||++++
T Consensus 216 --------------------~-~~~~~ld~a~~~~----------------~~~~V~evkrll~il~l~i~~~ifw~~~~ 258 (654)
T TIGR00926 216 --------------------H-WPLHWLDYAKDKH----------------DIRMIRSTKRLLRVLVLFIPLPMFWALFD 258 (654)
T ss_pred --------------------c-cchhHHHHhcccc----------------ccchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1246888776431 35789999999999999999999999999
Q ss_pred ccchHHHHHHHHhccCcCCeeee-----------eEEEEeecc
Q 048319 316 IGNTYFVEQADLLNKKVGNLKAT-----------TVILLPYYN 347 (348)
Q Consensus 316 Q~~t~~v~Qa~~md~~ig~f~iP-----------ili~iPi~d 347 (348)
|++|+++.|+++||++++++++| +++++|++|
T Consensus 259 Q~~s~~~~qa~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~ 301 (654)
T TIGR00926 259 QQGSRWTLQATRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFD 301 (654)
T ss_pred cchhHHHHHHHHhcCccCCEecCHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999888 888888887
No 3
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-47 Score=375.88 Aligned_cols=282 Identities=18% Similarity=0.255 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhC----CchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhh
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWK----ISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIG 77 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~----~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ 77 (348)
.+|+||||+|||| +.|++|++..++ +++++|..++++|++++|++|++|||+|||++|+||||+.|.+++.+||+
T Consensus 28 ~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~ 107 (498)
T COG3104 28 FVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHL 107 (498)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence 5899999999999 999999998877 99999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHH
Q 048319 78 LLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLL 157 (348)
Q Consensus 78 ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~ 157 (348)
+|+.++. .....++++|.+|++|+|++|||++++++|||+++||+ | |..|+.|
T Consensus 108 ~L~~~~~--------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----r---D~gFt~f 160 (498)
T COG3104 108 VLAISSV--------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----R---DGGFTLF 160 (498)
T ss_pred HHhcccc--------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----c---CCCccEE
Confidence 9998741 12467999999999999999999999999999999994 6 8999999
Q ss_pred HHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccCC--CCCCchhH---------HHHHHHHH
Q 048319 158 LFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENKE--PEGSPLTS---------VFRVFVAS 220 (348)
Q Consensus 158 y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~--p~gs~l~~---------~~~V~~~a 220 (348)
|+++| ++++.++++++ ||+.+|+++++.|.+++++|+.+++++...+ |.-.|+.. +..++.++
T Consensus 161 Y~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (498)
T COG3104 161 YMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAA 240 (498)
T ss_pred EEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHH
Confidence 99999 88999999987 9999999999999999999999999987664 22233211 11111111
Q ss_pred H-hhccCCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCch-hhhhhhhCCCCCcccccCCcccccCcchhHHHHHhh
Q 048319 221 T-TKLFYRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGC-LEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLL 298 (348)
Q Consensus 221 ~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~-ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l 298 (348)
. .... ..+.+++ +.+.......... ....+| .+++ ||+||++
T Consensus 241 ~~~~~l------------------------------~~~~~~~~~~~~~i~~~~~~~--~~~~~~---~~~~-~er~r~~ 284 (498)
T COG3104 241 LLTLLL------------------------------NQNTFSGVLLVISILIAIIYF--AEAFRS---PKVF-DERRRLL 284 (498)
T ss_pred HHHHHH------------------------------HHHHHHHHHHHHHHHHHHHHH--HHHhcc---CccH-HHHHHHH
Confidence 1 0000 0000110 0000000000000 001122 3445 8999999
Q ss_pred hhhhHHHHHHHHHHhhcccchHHHHHHHHh-ccCcCCeeee-----------eEEEEeecc
Q 048319 299 RMIPICLTFIIPGVVSSIGNTYFVEQADLL-NKKVGNLKAT-----------TVILLPYYN 347 (348)
Q Consensus 299 ~~lpif~~~ii~~~~~~Q~~t~~v~Qa~~m-d~~ig~f~iP-----------ili~iPi~d 347 (348)
++||+|+..++||++++|++|.+..|+.+| ||++.||++| |+++.|+++
T Consensus 285 ~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a 345 (498)
T COG3104 285 AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILA 345 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHH
Confidence 999999999999999999999999999766 7885569998 999999875
No 4
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=100.00 E-value=7.6e-37 Score=298.65 Aligned_cols=252 Identities=28% Similarity=0.422 Sum_probs=177.2
Q ss_pred hHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccch
Q 048319 62 YWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAIN 141 (348)
Q Consensus 62 ~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~ 141 (348)
||||++|++++.+|+++|++++.|...+ ++.+.+.+++||+++++|+|++|||+++|+||||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~-------------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~ 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLP-------------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhh-------------hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch
Confidence 7999999999999999999999865443 345678999999999999999999999999999998853
Q ss_pred hhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccC-CCCCCchhH-H
Q 048319 142 EHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENK-EPEGSPLTS-V 213 (348)
Q Consensus 142 ~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~-~p~gs~l~~-~ 213 (348)
+++ +++||||||++| +++.+.++|+| ||+++|++|+++|++++++|+.++++|+++ +|.|+++.+ .
T Consensus 68 ---~~~---~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~ 141 (372)
T PF00854_consen 68 ---SRR---DSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFI 141 (372)
T ss_dssp ---THH---HHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--S
T ss_pred ---hhh---hhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhH
Confidence 246 899999999999 78899999998 999999999999999999999999999999 788999998 5
Q ss_pred HHHHHHHHhhccCCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCccc-ccCcchhH
Q 048319 214 FRVFVASTTKLFYRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWR-LCSVTEVE 292 (348)
Q Consensus 214 ~~V~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~-~~~~~~Ve 292 (348)
.+++.++.++++...|.+...+++..... . ...........+.+...... ...|. .|+++++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 205 (372)
T PF00854_consen 142 KLVLVAAFKKRKLAVPKGSSWLDWALFQY-----S----ERSIFGIIVFIRAAVIFFPE-------IFFWALFCQVQRVE 205 (372)
T ss_dssp HHHHHHHHHHHCCCH-HHHHHHHHHHHHH-----C----CCCCCCCCCHHHHHHHHCCC-------HHHHTTTSSTTTHH
T ss_pred HHHHHHHHHHhhcccccchHHHHHhhhhh-----h----hhhhhhhhhhccchhhhhhh-------hhhcccCCccceee
Confidence 66666666766665442211111110000 0 00000111122222222111 11222 27889999
Q ss_pred HHHHhhhhhhHHHHHHHHHHhhcccchHHHHHHHHhccCcCC-eeee-----------eEEEEeeccC
Q 048319 293 ETKRLLRMIPICLTFIIPGVVSSIGNTYFVEQADLLNKKVGN-LKAT-----------TVILLPYYNN 348 (348)
Q Consensus 293 e~k~~l~~lpif~~~ii~~~~~~Q~~t~~v~Qa~~md~~ig~-f~iP-----------ili~iPi~d~ 348 (348)
++|.+.+++|+|.+.++|+.++.|..++.+.|+.+||+.+++ +++| +++++|++|+
T Consensus 206 ~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~ 273 (372)
T PF00854_consen 206 ELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDR 273 (372)
T ss_dssp HCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHH
T ss_pred eeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988 9998 8899999874
No 5
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.98 E-value=1.6e-31 Score=270.59 Aligned_cols=273 Identities=11% Similarity=0.125 Sum_probs=203.9
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
+++|+|||++|||+ +++.+|+++.+|+++++++.+++.|....|+++++||+++||++||||+++++.+++.+|++++.
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~ 99 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG 99 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999 99999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 81 MSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 81 ~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
++.. ....+++++.++++|.|++|||.+++++|||+++++ ++ ++.|+++|++
T Consensus 100 ~~~~---------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~----~~---~~~~~~~~~~ 151 (489)
T PRK10207 100 MSLL---------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDP----RL---DGAFTLFYMS 151 (489)
T ss_pred Hhcc---------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCch----hh---hcchhHHHHH
Confidence 7521 123466889999999999999999999999987653 24 6789999999
Q ss_pred Hh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccC--CCCCCchh--HHHHHHH------HHHhhc
Q 048319 161 VP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENK--EPEGSPLT--SVFRVFV------ASTTKL 224 (348)
Q Consensus 161 in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~--~p~gs~l~--~~~~V~~------~a~~~~ 224 (348)
+| ++++++.++++ ||+++|.++++.++++++.+..+++.+++. +|++++.. +...+.. .....
T Consensus 152 ~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~- 230 (489)
T PRK10207 152 INIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAW- 230 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHH-
Confidence 99 77888888886 999999999999999999998888777654 34444331 1111000 00000
Q ss_pred cCCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhhhhHH
Q 048319 225 FYRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRMIPIC 304 (348)
Q Consensus 225 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~lpif 304 (348)
..+.. +.. . -.+..+...... ..-++....++ +|+++.+..++++
T Consensus 231 ~~~~~-~~~------------------------~--~~~~~~~~i~~~-------~f~~~~~~~~~-~~r~r~~~~~~l~ 275 (489)
T PRK10207 231 LMHNV-EVA------------------------N--LVLIVLSIVVTI-------IFFREAFKLDK-TGRNKMFVAFVLM 275 (489)
T ss_pred HHhhh-hHH------------------------H--HHHHHHHHHHHH-------HHHHHHhcCCH-HHHHHHHHHHHHH
Confidence 00000 000 0 000000000000 00000011223 4578888899999
Q ss_pred HHHHHHHHhhcccchHHHHHHH-HhccCcCCeeee
Q 048319 305 LTFIIPGVVSSIGNTYFVEQAD-LLNKKVGNLKAT 338 (348)
Q Consensus 305 ~~~ii~~~~~~Q~~t~~v~Qa~-~md~~ig~f~iP 338 (348)
+..++||.+++|+.+....|++ ++|+++.|+++|
T Consensus 276 ~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~ 310 (489)
T PRK10207 276 LEAVVFYILYAQMPTSLNFFAINNVHHEILGFSIN 310 (489)
T ss_pred HHHHHHHHHHHHcccHHHHHHHHhccccccceEEC
Confidence 9999999999999999999987 578888788876
No 6
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.97 E-value=3.6e-31 Score=266.88 Aligned_cols=281 Identities=15% Similarity=0.192 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
+.+|+|||++|||+ ..+.+|+++.+|++..+++.+.+.+....++++++||+++||++||||+++++.++..+|++++.
T Consensus 15 ~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~ 94 (493)
T PRK15462 15 VALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLG 94 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999 99999999999999999999999999999999999999999999999999999999999998776
Q ss_pred cccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 81 MSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 81 ~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
.... ....+++++.++++|.|..|||.+++++|+|+++|+ +| ++.|+++|+.
T Consensus 95 ~~~~---------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~----~R---~sgf~i~Y~~ 146 (493)
T PRK15462 95 ASEI---------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP----RR---DGGFSLMYAA 146 (493)
T ss_pred Hhhc---------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc----cc---cceehHHHHH
Confidence 4210 113466788889999999999999999999987765 25 8899999999
Q ss_pred Hh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccCCC-CCCchh--HHHHHH-----HHH-----H
Q 048319 161 VP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENKEP-EGSPLT--SVFRVF-----VAS-----T 221 (348)
Q Consensus 161 in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p-~gs~l~--~~~~V~-----~~a-----~ 221 (348)
+| .+++.++++++ ||+++|+++++.|++++++++.+++.+.+..+ +.+|.. +..+.. ... .
T Consensus 147 ~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (493)
T PRK15462 147 GNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPAL 226 (493)
T ss_pred HHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence 99 78888888886 99999999999999999999998887754311 112221 100000 000 0
Q ss_pred hhccCCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCchh-hhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhh
Q 048319 222 TKLFYRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCL-EKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRM 300 (348)
Q Consensus 222 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l-d~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~ 300 (348)
..... . + .....+ -.+..... ..--+...+....||+|+++.+
T Consensus 227 ~~~~~---------~-------------------~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~er~r~~~~ 270 (493)
T PRK15462 227 ITVLF---------W-------------------K-EWSVYALIVATIIGL-------GVLAKIYRKAENQKQRKELGLI 270 (493)
T ss_pred HHHHH---------H-------------------H-HHHHHHHHHHHHHHH-------HHHHHHHHhcCCHHHHhhHHHH
Confidence 00000 0 0 000000 00000000 0000000000123789999999
Q ss_pred hhHHHHHHHHHHhhcccchHHHHHH-HHhccCcCCeeee-----------eEEEEeec
Q 048319 301 IPICLTFIIPGVVSSIGNTYFVEQA-DLLNKKVGNLKAT-----------TVILLPYY 346 (348)
Q Consensus 301 lpif~~~ii~~~~~~Q~~t~~v~Qa-~~md~~ig~f~iP-----------ili~iPi~ 346 (348)
+++++..++||+.|+|++|..+.-+ +++||++++|++| |+++.|++
T Consensus 271 ~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~ 328 (493)
T PRK15462 271 VTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFL 328 (493)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHH
Confidence 9999999999999999999877766 6799999999999 66667753
No 7
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=2.4e-30 Score=261.02 Aligned_cols=286 Identities=15% Similarity=0.145 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhh--hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEV--WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGL 78 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~--l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~l 78 (348)
.+.|++||++|||+ ++|.+|++++ +|++..+++.+.+.+....++.+++||+++||++||||+++++.+++.+|+++
T Consensus 16 ~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~ 95 (475)
T TIGR00924 16 FFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFM 95 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHH
Confidence 46899999999999 9999999987 99999999999999999999999999999999889999999999999999998
Q ss_pred hhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHH
Q 048319 79 LTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLL 158 (348)
Q Consensus 79 l~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y 158 (348)
+.++. +...+++++.++++|.|+++|+.+++++|++++++++ +| ++.|+++|
T Consensus 96 ~~~~~----------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r---~~~~~~~~ 147 (475)
T TIGR00924 96 LAMSI----------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RR---DGGFTLFY 147 (475)
T ss_pred HHhcc----------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cc---cceehhHH
Confidence 88642 2356778888999999999999999999999876532 25 77899999
Q ss_pred HHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccCCCCCCchhHH-----H--HH----HHHHH
Q 048319 159 FMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENKEPEGSPLTSV-----F--RV----FVAST 221 (348)
Q Consensus 159 ~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~l~~~-----~--~V----~~~a~ 221 (348)
+++| .+++.+.++++ ||+++|.++++.++++.++++..++.|++.+++++++.+. . .+ +...+
T Consensus 148 ~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (475)
T TIGR00924 148 MSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF 227 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH
Confidence 9999 78888888886 9999999999999999999998888887665544433211 0 00 00111
Q ss_pred hhccCCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhhh
Q 048319 222 TKLFYRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRMI 301 (348)
Q Consensus 222 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~l 301 (348)
+.... ...... .....+ ....++.....+ ...+| +.+++| +++..+++
T Consensus 228 ~~~~~-~~~~~~-----------------~~~~~~-----~~~~~~~~~~~~----~~~~~----~~~~~~-~~~~~~~l 275 (475)
T TIGR00924 228 FCAWL-MHHVVI-----------------ANILLM-----TVTLAVIIFFFR----LAFKP----RLDAVA-RNKMYAYI 275 (475)
T ss_pred HHHHH-HhccHH-----------------HHHHHH-----HHHHHHHHHHHH----HHHhc----cCCHHH-HhHHHHHH
Confidence 11000 000000 000000 000111110000 00111 234444 55567799
Q ss_pred hHHHHHHHHHHhhcccchHHH-HHHHHhccCcCCeeee-----------eEEEEeecc
Q 048319 302 PICLTFIIPGVVSSIGNTYFV-EQADLLNKKVGNLKAT-----------TVILLPYYN 347 (348)
Q Consensus 302 pif~~~ii~~~~~~Q~~t~~v-~Qa~~md~~ig~f~iP-----------ili~iPi~d 347 (348)
|++++.++||++++|+.|.+. .|.++||++++++++| ++++.|+++
T Consensus 276 ~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~ 333 (475)
T TIGR00924 276 VLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLA 333 (475)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999654 5667899999999998 666666643
No 8
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.95 E-value=2.8e-27 Score=240.17 Aligned_cols=274 Identities=13% Similarity=0.170 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
++.|+|||++||++ ..+..|+++++|++.++++.+.+.+....+..++++|+++||++|||++++++.+++.+|+.++.
T Consensus 27 ~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~ 106 (500)
T PRK09584 27 FSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVA 106 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999 99999999999999999999999999999999999999999988999999999999999998887
Q ss_pred cccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 81 MSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 81 ~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
++.. ....+++++.+.++|.|.++|+.+++++|+|+++++ ++ ++.++++|++
T Consensus 107 ~~~~---------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~----~~---~~~~~~~~~~ 158 (500)
T PRK09584 107 WSGH---------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDP----RL---DGAFTMYYMS 158 (500)
T ss_pred Hhcc---------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCch----hh---hhcchHHHHH
Confidence 6421 234567888899999999999999999999986543 24 6689999999
Q ss_pred Hh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccC--CCCCCchhH------HHHHHHHHHhhcc-
Q 048319 161 VP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENK--EPEGSPLTS------VFRVFVASTTKLF- 225 (348)
Q Consensus 161 in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~--~p~gs~l~~------~~~V~~~a~~~~~- 225 (348)
+| .+++.+.+++. ||+++|.++++.++++++.++..++.++++ +|+++|... ...+.........
T Consensus 159 ~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (500)
T PRK09584 159 INIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL 238 (500)
T ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence 99 77888888886 999999999999999998888776665543 343333221 1111111111100
Q ss_pred CCCCCCCcccccCCCCCCCCCCCCCCccccCCCCCchhhhhhhhCCCCCcccccCCcccccCcchhHHHHHhhhhhhHHH
Q 048319 226 YRLPSDASELYEGNDTDDSFSDSDDSSFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRLCSVTEVEETKRLLRMIPICL 305 (348)
Q Consensus 226 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~~~~~~Vee~k~~l~~lpif~ 305 (348)
...++. . + ....+........ ...+.+..++ +|+|+.+..+++++
T Consensus 239 ~~~~~~----~-------------------~-~~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~~~~~~~ 283 (500)
T PRK09584 239 LHNQEI----A-------------------R-MALGVVALGIVVI----------FGKEAFAMKG-AARRKMIVAFILML 283 (500)
T ss_pred HhcchH----H-------------------H-HHHHHHHHHHHHH----------HHHHHhhcCH-HHHHHHHHHHHHHH
Confidence 000000 0 0 0000000000000 0000012233 46778888899999
Q ss_pred HHHHHHHhhcccchHHHHHHHH-hccCcCCeeee
Q 048319 306 TFIIPGVVSSIGNTYFVEQADL-LNKKVGNLKAT 338 (348)
Q Consensus 306 ~~ii~~~~~~Q~~t~~v~Qa~~-md~~ig~f~iP 338 (348)
..++||+.+.|+++.+..|+.+ +|+++.++.+|
T Consensus 284 ~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~ 317 (500)
T PRK09584 284 EAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVE 317 (500)
T ss_pred HHHHHHHHHHHhccHHHHHHHHhccccccceEEC
Confidence 9999999999999999999965 78888888887
No 9
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.16 E-value=5.5e-10 Score=105.99 Aligned_cols=158 Identities=19% Similarity=0.209 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
+..+...++.... ..+..++.+++|.+..+.+.+.+.+.....+..+++|+++|| +||||.+.++.++..++..++.+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhhHHHHhhh
Confidence 4456666666666 555548888999999999999999999999999999999999 59999999999999999555544
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
+ + +.+.++++..+.++|.|...|...++..|.+++++ | .+.++++..+.
T Consensus 82 ~--~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~---~~~~~~~~~~~ 130 (352)
T PF07690_consen 82 A--S--------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------R---GRAFGILSAGF 130 (352)
T ss_dssp H--C--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------H---HHHHHHHHHHH
T ss_pred h--h--------------------hHHHHhhhccccccccccccccccccccccchhhh------h---hhccccccchh
Confidence 2 1 23478888999999999999999999999998743 3 55677777777
Q ss_pred h---hhcchhhcccc---cchhhHHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK---PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 162 n---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~v 192 (348)
+ .+++.+.+++. ||++.|.+.++..+++.++
T Consensus 131 ~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 131 SLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 7 66766666654 8999999999988888764
No 10
>PRK10054 putative transporter; Provisional
Probab=99.14 E-value=9.3e-10 Score=108.40 Aligned_cols=157 Identities=18% Similarity=0.185 Sum_probs=122.6
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..++-.++++.+ ..+..|+++.+|++..+.+.+.+.+.....+..+++|+++|| +|||+.+.++.++..++.+++..+
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHHHHHHHHHHHH
Confidence 456677888888 888999999999999999999999988888899999999999 599999999999988888776654
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
. +...+++...+.+.+.+...|...+..+|.++++ ++ .+.+++.+...|
T Consensus 94 ~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~---~~~~g~~~~~~~ 142 (395)
T PRK10054 94 N----------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST------SK---TKIFSLNYTMLN 142 (395)
T ss_pred h----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh------HH---HHHHHHHHHHHH
Confidence 1 2334444555666666677777888778776533 24 668899999888
Q ss_pred ---hhcchhhcccc--cchhhHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYIK--PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 163 ---~~~~~~~~yi~--g~~~~F~i~~~~~~i~~~v 192 (348)
.+++.+.+++. ||+..|.+.++..+++.+.
T Consensus 143 lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 143 IGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 66666666654 9999999888777776543
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.11 E-value=2.3e-09 Score=105.79 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
...++-+++++.+ ..+..|+++++|++..+.+.+...+.....+..+++|+++|| +|||+++.++.++..++.+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHHHHHHHHH
Confidence 3456778899988 888999999999999999999999988889999999999999 59999999999999999887765
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
+. +.+.+++...+.+++.|...|...+...|.+++++ + .+.+++++...
T Consensus 96 ~~----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~a~~~~~~~~ 144 (400)
T PRK11646 96 AH----------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------R---GRFFSLLMMQD 144 (400)
T ss_pred hc----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------H---HHHHHHHHHHH
Confidence 31 24567777888899998899998888887765322 4 66788888887
Q ss_pred h---hhcchhhcccc--cchhhHHHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 162 n---~~~~~~~~yi~--g~~~~F~i~~~~~~i~~~vf 193 (348)
+ .+++.+.+++. ||++.|.+.++..+++.++.
T Consensus 145 ~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~ 181 (400)
T PRK11646 145 SAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFN 181 (400)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 7 66666666554 99999998877766554443
No 12
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.7e-10 Score=113.72 Aligned_cols=141 Identities=16% Similarity=0.242 Sum_probs=119.7
Q ss_pred hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccc
Q 048319 23 TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECI 102 (348)
Q Consensus 23 ~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~ 102 (348)
++.+|.+....+.+-.+|...-.+...+.|+++||| -|++.+.+|..+..+..+.-..+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs-------------------- 118 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFS-------------------- 118 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHH--------------------
Confidence 346899999999999999999999999999999997 99999999999999887765543
Q ss_pred ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc----cc
Q 048319 103 VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK----PW 175 (348)
Q Consensus 103 ~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~----g~ 175 (348)
.+.+.+.+...++++|...+-|..+++++|.|+++. | .+.|.||||+++ .+|.++-+++. .|
T Consensus 119 --~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------R---s~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 119 --NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------R---SRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred --HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------h---hHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 256788888999999999999999999999999764 5 889999999999 77777777776 49
Q ss_pred hhhHHHHHHHHHHHH-HHHHh
Q 048319 176 NLRFGVSAICTVIAT-LLFLS 195 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~-~vf~~ 195 (348)
+++|.+.++.+++.. ++|++
T Consensus 188 r~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhh
Confidence 999998887776544 44443
No 13
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.09 E-value=3.5e-09 Score=100.80 Aligned_cols=163 Identities=12% Similarity=-0.019 Sum_probs=123.2
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..+...++.... ..+..|.. +++.+..+.+.+...+.....+..++.|+++||+ ||||++.++.++..++..++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555 55556665 4899999999999999999999999999999995 99999999999988887776654
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
... ...+.+.++++..+.+++.|...|...++.+|.+++++ | .+.++++..+.+
T Consensus 85 ~~~-----------------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~ 138 (365)
T TIGR00900 85 ALL-----------------GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------L---TQANSLSQAVRS 138 (365)
T ss_pred HHc-----------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------H---HHHHhHHHHHHH
Confidence 310 01245778888889999999999999999999887542 3 567777777766
Q ss_pred ---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+++.+..++- ||++.|.+.++..+++.+...
T Consensus 139 ~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 139 LFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 66665555543 999999988777666654433
No 14
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.02 E-value=1.2e-08 Score=101.25 Aligned_cols=157 Identities=15% Similarity=0.164 Sum_probs=114.6
Q ss_pred HHHHHHHHhH-HHHHHHh--------hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhh
Q 048319 6 WADCLAQFVM-WTMMEYL--------TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGI 76 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl--------~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~ 76 (348)
++--+.+|+. ..+...+ .+.+|.+.+.++..++.|....-+..+++|+++|| +||||++..+..+..++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~ 95 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTLAC 95 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHHHH
Confidence 4444566666 5554433 34689999999999999998888899999999999 599999999999999988
Q ss_pred hhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHH
Q 048319 77 GLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKL 156 (348)
Q Consensus 77 ~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~ 156 (348)
++...+. +...++++..+.++|.|..-+...+...|.+++++ + .+...+
T Consensus 96 ~~~~~a~----------------------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~ 144 (413)
T PRK15403 96 AATLFTT----------------------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------G---IKLMAI 144 (413)
T ss_pred HHHHHcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------H---HHHHHH
Confidence 7766541 34667888888899888665555566777766432 2 445666
Q ss_pred HHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 157 LLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 157 ~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+....+ .+++.+..++. ||++.|.+.++..+++.+..+
T Consensus 145 ~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 145 ITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 666665 55655555543 999999988877666655433
No 15
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.01 E-value=1.1e-08 Score=96.37 Aligned_cols=159 Identities=18% Similarity=0.163 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
...+.+.++++.. ..+..|. +.+|.+..+.+.+...+.....+..++.|+++|| +||||++.++.++..++.+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~~~~~~~~ 83 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFALGSLLLAF 83 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHHHHHHHHH
Confidence 4567888888888 6666665 4679999999999999999999999999999999 59999999999999999988776
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
.. +...++++..+.+++.|...|...++..|.+++++ | ...+++.+...
T Consensus 84 ~~----------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~ 132 (352)
T cd06174 84 AS----------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------R---GRALGLFSAGF 132 (352)
T ss_pred hc----------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------h---hhhhhHHHHHH
Confidence 41 24677888889999999999999999999887632 3 55677777776
Q ss_pred h---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 162 n---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ .+++.+..++. +|+..|.+.++..+++.++..
T Consensus 133 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 133 GLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 6 56665655554 799999988877776665443
No 16
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.99 E-value=1e-08 Score=107.46 Aligned_cols=247 Identities=9% Similarity=-0.078 Sum_probs=178.2
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
-.+...-.++...+.+...+++.++.+.+.||-..|++.++..-.+.++++.+.+.+.+.+.. | ..
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~-------------~~ 79 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-P-------------SS 79 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-c-------------cc
Confidence 345556678899999999999999999999999999999999999999999999988765432 1 23
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhh--cccccchh-----
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPI--SYIKPWNL----- 177 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~--~yi~g~~~----- 177 (348)
.+.....++++.++++.+|.+++.+.+.++|.|.-++ +++ ++.+++|||..+....... +.+.+|--
T Consensus 80 ~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 80 GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE---RQL---SLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc---cch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3345567788999999999999999999999998653 556 7899999999986664321 12225543
Q ss_pred ------hHHHHHHHHHHHHHHHHhcCcccccCCCCCCchhHHHHHHHHHHhhccCCCCCCCcccccCCCCCCCCCCCCCC
Q 048319 178 ------RFGVSAICTVIATLLFLSGTCTYENKEPEGSPLTSVFRVFVASTTKLFYRLPSDASELYEGNDTDDSFSDSDDS 251 (348)
Q Consensus 178 ------~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~l~~~~~V~~~a~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 251 (348)
-++..++.+++.++.++.....++..+|.+.+...+.+++..+...++.+
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~------------------------ 209 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKR------------------------ 209 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHh------------------------
Confidence 12255666666667777776666666665554444555544433322110
Q ss_pred ccccCCCCCchhhhhhhhCCCCCcccccCCcccc--cCcchhHHHHHhhhhhhHHHHHHHHHHhhcccchHHHHHHHHhc
Q 048319 252 SFVQPTCGLGCLEKAAVILPNGTIEQQETNRWRL--CSVTEVEETKRLLRMIPICLTFIIPGVVSSIGNTYFVEQADLLN 329 (348)
Q Consensus 252 ~~l~~~~~~~~ld~a~~~~~~~~~~~~~~~~w~~--~~~~~Vee~k~~l~~lpif~~~ii~~~~~~Q~~t~~v~Qa~~md 329 (348)
..+ ...+ ....|.. +....+++++.+.|+++++...+.+|+.+.|....+..|..+|+
T Consensus 210 --~~~-~~~~-----------------~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~ 269 (654)
T TIGR00926 210 --FST-RSEH-----------------WPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQAT 269 (654)
T ss_pred --hcc-CCcc-----------------cchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 000 0000 0122322 24455678999999999999999999999999999999999999
Q ss_pred cCcCCe
Q 048319 330 KKVGNL 335 (348)
Q Consensus 330 ~~ig~f 335 (348)
+..+++
T Consensus 270 ~m~~~l 275 (654)
T TIGR00926 270 RMDGDV 275 (654)
T ss_pred HhcCcc
Confidence 987654
No 17
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.99 E-value=1.7e-08 Score=97.79 Aligned_cols=157 Identities=15% Similarity=0.108 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 3 ALLWADCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 3 ~~e~~Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
+..+.+.+..+-+......+.+++|.+.++.+.+.+.+.....+..++.|+++||+ |||+.+.++.++..++.+++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~ 97 (405)
T TIGR00891 19 LGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFA 97 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 34556666666555556677888999999999999999999999999999999995 99999999999999988776653
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
. +...++++..+.++|.|+..|...++..|.+++++ | .+...++....+
T Consensus 98 ~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~---~~~~~~~~~~~~ 146 (405)
T TIGR00891 98 P----------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------R---NKASGLLISGYA 146 (405)
T ss_pred c----------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------h---hHHHHHHHHHHH
Confidence 1 24667788889999999999999999998886532 3 456666666555
Q ss_pred ---hhcchhhccc-c----cchhhHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYI-K----PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 163 ---~~~~~~~~yi-~----g~~~~F~i~~~~~~i~~~ 191 (348)
.+++.+...+ + +|++.|.+.++..++..+
T Consensus 147 ~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~ 183 (405)
T TIGR00891 147 VGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALW 183 (405)
T ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 4444444433 2 499999886665554443
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.98 E-value=1.9e-08 Score=98.44 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 4 LLWADCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 4 ~e~~Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
..++|-+..+........+.+++|.+..+.+.+.+.+.....+..++.|+++|| +||||++..+.++..++.+++....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK11551 23 VALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVALFGLFSLATAQAW 101 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHhc
Confidence 344555555555333455667899999999999999999999999999999999 5999999999998888876665531
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
+...++++..+.++|.|...|...+..+|.+++++ | .+..++++...+
T Consensus 102 ----------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~ 150 (406)
T PRK11551 102 ----------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------R---GTAVSLMYCGVPF 150 (406)
T ss_pred ----------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHH
Confidence 24567778888999999999999999998886432 3 567777777776
Q ss_pred --hhcchhhcccc---cchhhHHHHHHHHHHHHH
Q 048319 163 --VAAIIPISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 163 --~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.+++.+..++. +|+..|.+.++..++..+
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK11551 151 GGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP 184 (406)
T ss_pred HHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence 55554443333 899999987766555444
No 19
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.97 E-value=1.1e-08 Score=98.87 Aligned_cols=144 Identities=12% Similarity=0.136 Sum_probs=111.3
Q ss_pred HHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 19 MEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 19 ~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
...+.+.+|.+..+++.+.+.+.....+..+++|+++|| +|||+.+.++.++..++..++..+.
T Consensus 14 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i~~~~~~~~~--------------- 77 (377)
T PRK11102 14 LPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFALAAVACALAQ--------------- 77 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 334445799999999999999999999999999999999 5999999999999999988876541
Q ss_pred CcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc--
Q 048319 99 PECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK-- 173 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~-- 173 (348)
+...+++...+.+++.|...+...++..|.+++++ | .+.+++++...+ .+++.+..++.
T Consensus 78 -------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 141 (377)
T PRK11102 78 -------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------F---SRMMSFVTLVMTIAPLLAPIIGGWLLVW 141 (377)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24566777888899999999999999998876432 3 556777776655 55665555443
Q ss_pred -cchhhHHHHHHHHHHHHHHHH
Q 048319 174 -PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 174 -g~~~~F~i~~~~~~i~~~vf~ 194 (348)
||++.|.+.++..++..+...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 142 FSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred cChHHHHHHHHHHHHHHHHHHH
Confidence 999999987776666554433
No 20
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=2.3e-08 Score=96.41 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=114.7
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
...++.+++|.+..+.+.+.+.+.....+..+++|+++|| +||||.+..+.++..++.+++..+.
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~-------------- 91 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFALSSLGLALSN-------------- 91 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3455677899999999999999999999999999999999 5999999999999999888776531
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK- 173 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~- 173 (348)
+...++++..+.++|.|..-+...++..|.+++++ | .+.+.+++...+ .+++.+.+++-
T Consensus 92 --------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~g~~~g~~~~~~l~~ 154 (385)
T TIGR00710 92 --------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------L---SRIYSILMPVLALAPAVAPLLGGYILV 154 (385)
T ss_pred --------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24567778889999999999999999998876432 3 556777666656 55555555543
Q ss_pred --cchhhHHHHHHHHHHHHHHHHhc
Q 048319 174 --PWNLRFGVSAICTVIATLLFLSG 196 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf~~g 196 (348)
||+..|.+.++..++..+.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 155 WLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998777766665554443
No 21
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.95 E-value=3.2e-08 Score=97.18 Aligned_cols=143 Identities=11% Similarity=0.031 Sum_probs=107.2
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
..+.+++|.+..+.+...+.+.....+..++.|+++||+ ||||.+.++..+..++.+++..+.
T Consensus 37 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~---------------- 99 (406)
T PRK15402 37 LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ---------------- 99 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc----------------
Confidence 345578999999999999999888889999999999995 999999999999888887765531
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK--- 173 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~--- 173 (348)
+...+++...+.+++.|..-|...+...|.+++++ + .+..++.+...+ .+++.+.+++.
T Consensus 100 ------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~---~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 100 ------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------A---IKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred ------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 24566777788889988888888888888876432 2 334555444433 55555555543
Q ss_pred cchhhHHHHHHHHHHHHHHHH
Q 048319 174 PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 174 g~~~~F~i~~~~~~i~~~vf~ 194 (348)
||++.|.+.++..+++.+...
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHH
Confidence 999999987777776655443
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=98.95 E-value=1.6e-08 Score=98.85 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=111.5
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
+...+.+++|.+..+.+.+.+.+.....+..++.|+++|| +||||.+..+.++..++.++...+.
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~-------------- 95 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFVLFIASHVLSALAW-------------- 95 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 3456677899999999999999988888888889999999 5999999999999999987766541
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-c
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-K 173 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-~ 173 (348)
+...++++..+.+++.|..-|...++..|.+++++ | .+..+++....+ .+++.+..++ +
T Consensus 96 --------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r---~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 96 --------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------K---AQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------h---hhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34667777788999998888888899998876432 3 456666666555 5555555544 3
Q ss_pred --cchhhHHHHHHHHHHHHHHHH
Q 048319 174 --PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf~ 194 (348)
||++.|.+.++..++..+...
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876665544433
No 23
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.95 E-value=9e-09 Score=98.35 Aligned_cols=146 Identities=16% Similarity=0.146 Sum_probs=115.8
Q ss_pred HHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCC
Q 048319 17 TMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSE 96 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~ 96 (348)
....++.+++|.+..+.+.+.+.+.....+..+++|+++|| +|||+++.++.++..++..++..+.
T Consensus 15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~~~~~~~~~~------------- 80 (399)
T TIGR00893 15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGVFTGLQAFAG------------- 80 (399)
T ss_pred HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence 34455778899999999999999999999999999999999 5999999999999999888776641
Q ss_pred CCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-
Q 048319 97 YKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI- 172 (348)
Q Consensus 97 ~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi- 172 (348)
+...++++..+.++|.|..-|...++..|.+++++ | .+.++++....+ .+++.+..++
T Consensus 81 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~~~~~~~~l~ 142 (399)
T TIGR00893 81 ---------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------R---ATAVSIFNSAQGLGGIIGGPLVGWIL 142 (399)
T ss_pred ---------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------H---HHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 35678888899999999999999999998876432 3 556777766666 5665555543
Q ss_pred c--cchhhHHHHHHHHHHHHHHHH
Q 048319 173 K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 173 ~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ ||++.|.+.++..++..++..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 143 IHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HhCCchHHHHHHHHHHHHHHHHhh
Confidence 3 999999988776665554443
No 24
>PRK12382 putative transporter; Provisional
Probab=98.94 E-value=2.6e-08 Score=97.22 Aligned_cols=147 Identities=11% Similarity=-0.046 Sum_probs=107.2
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC-CccCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP-PVLAGFVGTC 94 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~-p~~~~~~~~c 94 (348)
..+..|+.+++|.+..+.+.+.+.+.....+..+++|+++|| +||||.+..+.++..++.+...+... +...
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~------ 108 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGLAGLAYLLAAILPVSA------ 108 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHHHHHHHHhhhccccch------
Confidence 445568888999999999999999999999999999999999 59999999998887776544333222 1100
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcc
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISY 171 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~y 171 (348)
..+...++++..+.++|.+..-|...+.+.|.++++ | | .+..+++..+.+ .+++.+..+
T Consensus 109 ---------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~---~---r---~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 109 ---------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK---H---S---GKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc---c---c---chhhhHHHHHHHHHHHHHHHHHHH
Confidence 123566778888999999988888888888776532 1 3 556777777666 566666555
Q ss_pred cc---cchhhHHHHHHHHH
Q 048319 172 IK---PWNLRFGVSAICTV 187 (348)
Q Consensus 172 i~---g~~~~F~i~~~~~~ 187 (348)
+. ||+..+.+..+..+
T Consensus 171 l~~~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 171 LHSHFGFAALALTTMVLPL 189 (392)
T ss_pred HHhccChHHHHHHHHHHHH
Confidence 53 89887776554433
No 25
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.93 E-value=2e-08 Score=99.56 Aligned_cols=146 Identities=12% Similarity=0.100 Sum_probs=110.7
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
+....++++++|++..+.+.+.+.+....-+..+++|+++|| +||||.+..+.+++.++.++..++.
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~------------ 94 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMVLWGIASTATMFAT------------ 94 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 344557888999999999999999999999999999999999 5999999999999999988877641
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...++++..+.++|.|+.-|....+.+|-++++. | .....++....+ .+++.+.+++
T Consensus 95 ----------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r---g~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 95 ----------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------R---ARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred ----------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24567788889999999998888888887776432 2 344555555544 4444443332
Q ss_pred -------c--cchhhHHHHHHHHHHHHHHH
Q 048319 173 -------K--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 173 -------~--g~~~~F~i~~~~~~i~~~vf 193 (348)
+ ||++.|.+.++..++..++.
T Consensus 156 ~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 156 LALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 2 99999999776665444333
No 26
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.93 E-value=1.6e-08 Score=101.13 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=116.2
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
.....++.+++|.+..+.+.+.+.+.....+..+++|+++||+ ||||.+.++.+++.++.++...+.
T Consensus 22 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 88 (485)
T TIGR00711 22 NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAP------------ 88 (485)
T ss_pred HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcC------------
Confidence 4455667778999999999999999999999999999999994 999999999999999988776541
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...++++..+.++|.|...|...++..|.+++++ | .+.+.++....+ .+++.+.+++
T Consensus 89 ----------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r---~~~~~~~~~~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 89 ----------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------R---GRAMAIWGLTVLVAPALGPTLGGWI 149 (485)
T ss_pred ----------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------H---HHHHHHHHHHHHHHhhhhhccHhHh
Confidence 24667788889999999999999999998886432 3 556777666665 6666666655
Q ss_pred c---cchhhHHHHHHHHHHHHHHHH
Q 048319 173 K---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
. ||++.|.+.+...+++.++..
T Consensus 150 ~~~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 150 IENYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred ccCcCceehhhhhhHHHHHHHHHHH
Confidence 3 999999987665555544333
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=98.91 E-value=2.8e-08 Score=95.71 Aligned_cols=144 Identities=15% Similarity=0.104 Sum_probs=111.2
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
.....++.+.+|.+..+++.+...+.....+..+++|+++|| +|||+++.++.++..++.+++....
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~~~~~~~~~~~------------ 103 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSILLFSVFTLLCALAT------------ 103 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHcc------------
Confidence 445566677899999999999999888888999999999999 5999999999999888887766531
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...++++..+.++|.|..-|...++.+|.++++. | .+.++++..+.+ .+++.+.+++
T Consensus 104 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 104 ----------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------R---GTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred ----------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------h---chhHhhHhhHHHHHHHHHHHHHHHH
Confidence 24567788889999999999999999999886432 3 456666666555 5666565555
Q ss_pred c---cchhhHHHHHHHHHHHHH
Q 048319 173 K---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~~ 191 (348)
. ||+..|.+.++..++..+
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred hhcccceeehhhhhhHHHHHHH
Confidence 3 999999987644444433
No 28
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.91 E-value=1.1e-08 Score=97.86 Aligned_cols=146 Identities=14% Similarity=0.074 Sum_probs=112.8
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
.....++.+.+|++..+.+.+.+.+.....+..+++|+++||+ |||+.+.++.++..++.+++..+.
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------ 81 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST------------ 81 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh------------
Confidence 4456778889999999999999999999999999999999995 999999999999999988877641
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcc-hhhcc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAI-IPISY 171 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~-~~~~y 171 (348)
+...++++..+.+++.|..-|...++..|.+++++ | .+.++++..+.+ .+++ .+...
T Consensus 82 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~~~~~~~~~ 142 (379)
T TIGR00881 82 ----------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------R---GTWVSFWNCSHNVGGGLLPPLVLFG 142 (379)
T ss_pred ----------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------h---eeeEeehhccchhHHHHHHHHHHHH
Confidence 34677788889999999999999999999887532 2 334555555544 4444 23333
Q ss_pred c-c--cchhhHHHHHHHHHHHHHHH
Q 048319 172 I-K--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 172 i-~--g~~~~F~i~~~~~~i~~~vf 193 (348)
+ + ||++.|.+.++..++..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 143 IAELYSWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred HHhcCCchhHHHHHHHHHHHHHHHH
Confidence 3 2 99999998877666544433
No 29
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.89 E-value=5.3e-08 Score=93.50 Aligned_cols=123 Identities=11% Similarity=0.062 Sum_probs=91.7
Q ss_pred HHHHHHhHHHHHH-HhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 8 DCLAQFVMWTMME-YLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 8 Er~a~yg~~~L~~-Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
.-.+++....+.. |+.+.+|++..+++.+.+.+.....+.++++|+++||+ ||||++.++.++..++.+++..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~--- 88 (366)
T TIGR00886 13 SFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAV--- 88 (366)
T ss_pred HHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHh---
Confidence 3334444434444 68899999999999999999999999999999999995 999999999999999988776641
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
.+...++++..+.+++.+.. +...+..+|.+++++ | ....+++....|
T Consensus 89 ------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~ 136 (366)
T TIGR00886 89 ------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------Q---GTALGLAAGWGN 136 (366)
T ss_pred ------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------h---hHHHHHHHHHhH
Confidence 02456677777888886665 446678887775432 2 445556554444
No 30
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.89 E-value=4.5e-08 Score=99.32 Aligned_cols=143 Identities=14% Similarity=0.079 Sum_probs=113.1
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
..+.+++|.+..+.+.+.+.|........+++|+++|| +|||+.+.++.++..+|.++...+.
T Consensus 30 p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~~~~~~~~~~a~---------------- 92 (495)
T PRK14995 30 PTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLFGLASLAAAFSP---------------- 92 (495)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHcC----------------
Confidence 34456899999999999999999888888999999999 5999999999999999998877641
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK--- 173 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~--- 173 (348)
+...++++..+.++|.|++.|.......+.+.++ + +| .+.+.++....+ .+++.+.+++-
T Consensus 93 ------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~--~---~r---~~~~g~~~~~~~~g~~~gp~lgg~l~~~~ 158 (495)
T PRK14995 93 ------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE--K---QR---NMALGVWAAVGSGGAAFGPLVGGILLEHF 158 (495)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--H---HH---HHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3567888888999999998888877777766432 1 24 567888888777 67777777664
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 048319 174 PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 174 g~~~~F~i~~~~~~i~~~vf 193 (348)
||++.|.+.....++..++.
T Consensus 159 gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 159 YWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHH
Confidence 99999998765555544433
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.89 E-value=4.2e-08 Score=96.66 Aligned_cols=148 Identities=14% Similarity=0.142 Sum_probs=111.8
Q ss_pred HHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 9 CLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 9 r~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
.+.++.+..+..++.+++|.+..+++.+.+.+.....+..+++|+++||+ |||+++.++.++..++.++...+.
T Consensus 31 ~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----- 104 (426)
T PRK12307 31 GFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLAS----- 104 (426)
T ss_pred HhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHh-----
Confidence 33333333345566678999999999999999999999999999999995 999999999999999988766641
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
+...++++..+.++|.|+.-+...++..|.++++. | .+...++..+.+ .++
T Consensus 105 -----------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 105 -----------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------K---SKASAFLVSGFGIGNIIA 158 (426)
T ss_pred -----------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------h---hHhhhHHHHHHhHHHHHH
Confidence 35677888889999999999999999998876432 3 445556555555 555
Q ss_pred chhhccc-c--cchhhHHHHHHHHHH
Q 048319 166 IIPISYI-K--PWNLRFGVSAICTVI 188 (348)
Q Consensus 166 ~~~~~yi-~--g~~~~F~i~~~~~~i 188 (348)
+.+.+++ + ||++.|.+.++..++
T Consensus 159 ~~l~~~l~~~~~w~~~f~i~~~~~~~ 184 (426)
T PRK12307 159 AYFMPSFAEAYGWRAAFFVGLLPVLL 184 (426)
T ss_pred HHHHHHHcccCCHHHHHHHHHHHHHH
Confidence 5444444 3 999999986554433
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.87 E-value=5.6e-08 Score=97.80 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=113.7
Q ss_pred HHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 8 DCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 8 Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
..+.++.+..+..++.+++|.+..+++.+.+.+.....+..+++|+++||+ ||||++.++.++..++.+++..+.
T Consensus 32 ~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~---- 106 (496)
T PRK03893 32 DGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFSVGTLACGFAP---- 106 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh----
Confidence 334443335556677788999999999999999998899999999999995 999999999999999988877641
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hh
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VA 164 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~ 164 (348)
+...++++..+.+++.|+..+...++..|.+++++ | ...+..++...+ .+
T Consensus 107 ------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~ 159 (496)
T PRK03893 107 ------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------R---NKASGFLISGFSIGAVV 159 (496)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHHHHHH
Confidence 35667888889999999999999999998886432 2 445566666555 55
Q ss_pred cchhhcccc---cchhhHHHHHHHHHH
Q 048319 165 AIIPISYIK---PWNLRFGVSAICTVI 188 (348)
Q Consensus 165 ~~~~~~yi~---g~~~~F~i~~~~~~i 188 (348)
++.+..++- ||++.|.+.++..++
T Consensus 160 ~~~~~~~l~~~~~w~~~f~~~~~~~~~ 186 (496)
T PRK03893 160 AAQVYSLVVPVWGWRALFFIGILPIIF 186 (496)
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 555555443 999999886554443
No 33
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.87 E-value=5e-08 Score=95.89 Aligned_cols=149 Identities=13% Similarity=0.049 Sum_probs=109.7
Q ss_pred HHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 9 CLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 9 r~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
|-.++.+.....-+.+++|.+..+.+.+.+.+....-+..+++|+++|| +||||++..+..+..+|.++...+.
T Consensus 22 ~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~~~~~~~~a~----- 95 (393)
T PRK09705 22 RPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAVGALMRELYP----- 95 (393)
T ss_pred chhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHHHHHHHHHCc-----
Confidence 3333434333445667899999999999999999999999999999999 5999999999999999999887652
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
+...++++..+.++|.|..-+.......|.++++ | ......+..+.+ .++
T Consensus 96 -----------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~-------~---~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 96 -----------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQR-------T---PLVMGLWSAALMGGGGLG 148 (393)
T ss_pred -----------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcccc-------c---hhHHHHHHHHHHHHHHHH
Confidence 2456778888999999999898888888776421 2 445555555555 555
Q ss_pred chhhcccc----cchhhHHHHHHHHHHHH
Q 048319 166 IIPISYIK----PWNLRFGVSAICTVIAT 190 (348)
Q Consensus 166 ~~~~~yi~----g~~~~F~i~~~~~~i~~ 190 (348)
..+.+++. +|+..|.+-++..++..
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 55555442 79888765444433333
No 34
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.86 E-value=8.6e-08 Score=93.71 Aligned_cols=149 Identities=9% Similarity=-0.036 Sum_probs=110.4
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC-CccCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP-PVLAGFVGTC 94 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~-p~~~~~~~~c 94 (348)
..+..|+.+++|.+..+.+.+.+.+.....+..++.|+++||+ ||||++..+.+++.++.+++.++.. ...
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~------- 107 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLAGLLAAW------- 107 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHhhhhhcc-------
Confidence 5566788889999999999999999999999999999999995 9999999999998887766655422 100
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcc
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISY 171 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~y 171 (348)
...+...+++...+.++|.|..-|+..+...|.+++++ | .+...++..+.+ .+++.+..+
T Consensus 108 --------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 108 --------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------T---GRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred --------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------h---ccchhhhhhhhhHHHHHHHHHHHH
Confidence 00124467778889999999999999998888876432 3 445666555555 455555444
Q ss_pred c-c--cchhhHHHHHHHHHHH
Q 048319 172 I-K--PWNLRFGVSAICTVIA 189 (348)
Q Consensus 172 i-~--g~~~~F~i~~~~~~i~ 189 (348)
+ + ||+..|.+..+..++.
T Consensus 171 l~~~~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 171 LYHWGGLAGLGLLIMLLALLG 191 (399)
T ss_pred HHHcccHHHHHHHHHHHHHHH
Confidence 4 2 9998888766554433
No 35
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.86 E-value=4.6e-08 Score=95.59 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=104.3
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
...++.+++|.+..+.+.+.+.+.....+..++.|+++|| +||||.+.++.++..++.++...+.
T Consensus 30 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~~-------------- 94 (394)
T PRK11652 30 AIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGMSIFILGTLVALFAH-------------- 94 (394)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3455667899999999999999999999999999999999 5999999999999988887765531
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK- 173 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~- 173 (348)
+...++++..+.++|.|...+...++..|.+++++ + .+...++..+.+ .+++.+..++.
T Consensus 95 --------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 95 --------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------L---RHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred --------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24567777888888888777777777777665321 2 334444444444 45555555443
Q ss_pred --cchhhHHHHHHHHHHHHH
Q 048319 174 --PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~ 191 (348)
||+..|.+.++..++..+
T Consensus 158 ~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 158 LFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred ccChHHHHHHHHHHHHHHHH
Confidence 999999987765554433
No 36
>PRK10504 putative transporter; Provisional
Probab=98.86 E-value=7.2e-08 Score=96.56 Aligned_cols=161 Identities=9% Similarity=0.038 Sum_probs=118.7
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
-++.-+.++.+ ..+-.|. +++|.+..+.+.+...+.....+..+++|+++|++ ||||.++.+..+..++.++...+.
T Consensus 19 ~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~ 96 (471)
T PRK10504 19 FFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLGSLFCALSG 96 (471)
T ss_pred HHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555566666 5444444 56999999999999998888888999999999995 999999999988888887655431
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
+...++++..+.++|.|..-|...+...|.+++++ + .+.+.++....+
T Consensus 97 ----------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~ 145 (471)
T PRK10504 97 ----------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------Y---MAAMTFVTLPGQV 145 (471)
T ss_pred ----------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHH
Confidence 24567778889999999999988888888765321 3 456667666666
Q ss_pred --hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCc
Q 048319 163 --VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTC 198 (348)
Q Consensus 163 --~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~ 198 (348)
.+++.+.+++. ||++.|.+......++.++.....+
T Consensus 146 g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 146 GPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 66666666553 9999999877666655554444333
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.86 E-value=3.3e-08 Score=94.38 Aligned_cols=145 Identities=11% Similarity=0.014 Sum_probs=109.1
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..++.+++|++..+.+.+.+.+.....+..+++|+++|| +|||+++.++.++..+|.++...+.
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~~~~~~~~~~------------ 89 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGLGFTFYAIAD------------ 89 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHHHHHHHHHHH------------
Confidence 567888889999999999999999999999999999999999 5999999999999999987766541
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhc-c
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPIS-Y 171 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~-y 171 (348)
+...++++..+.++|.|..-+...+...+.+++ + | .....++....+ .++..... .
T Consensus 90 ----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~---~---~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (377)
T TIGR00890 90 ----------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD----K---R---GLASGIIIGGYGLGSFILSPLITSV 149 (377)
T ss_pred ----------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc----c---c---HHHHHHHHHhcchhHhHHHHHHHHH
Confidence 356677777788999888777777766655532 1 2 445666666555 22222222 3
Q ss_pred cc--cchhhHHHHHHHHHHHHHHH
Q 048319 172 IK--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 172 i~--g~~~~F~i~~~~~~i~~~vf 193 (348)
++ ||++.|.+.++..++..+..
T Consensus 150 ~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 150 INLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHH
Confidence 33 89999998887666554433
No 38
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.86 E-value=3.6e-08 Score=97.85 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=89.7
Q ss_pred hH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 14 VM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 14 g~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
++ ..+...+++++|++..+++.+...+.....+..+++|++.|| +||||++.++..+..+|.+++..++.
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~g~~l~~~~~~-------- 90 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYALGAFLFWPAAE-------- 90 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 45 667788889999999999999999999999999999999999 59999999999999999877643321
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhcc
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIA 139 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~ 139 (348)
..+...++++..+.++|.|...+..+++..+..+++
T Consensus 91 -----------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~ 126 (410)
T TIGR00885 91 -----------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPES 126 (410)
T ss_pred -----------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHh
Confidence 113567888899999999999999999988765443
No 39
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.85 E-value=7.9e-08 Score=93.85 Aligned_cols=141 Identities=16% Similarity=0.134 Sum_probs=106.4
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
..+.+++|.+..+.+.+...+.....+..++.|+++|| +|||+.+.++.++..++..++..+.
T Consensus 27 p~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i~~~~~~~~~---------------- 89 (392)
T PRK10473 27 PRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFIIASLLCSLAE---------------- 89 (392)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHHHHHHHHHhC----------------
Confidence 33456799999999999999888888889999999999 5999999999999999888766531
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-c--
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-K-- 173 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-~-- 173 (348)
+...++++..+.+++.|..-+...++..|.+++++ | .+..++++...+ .+++.+..++ +
T Consensus 90 ------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r---~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 90 ------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------R---AKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred ------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 23456667778889988888888888888776432 3 556677666665 4555554444 2
Q ss_pred cchhhHHHHHHHHHHHHHH
Q 048319 174 PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 174 g~~~~F~i~~~~~~i~~~v 192 (348)
||+..|.+.++..++..++
T Consensus 155 g~~~~~~~~~~~~~i~~~~ 173 (392)
T PRK10473 155 PWQSLFYTMAAMGILVLLL 173 (392)
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 9999998877666555443
No 40
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.85 E-value=1.1e-07 Score=93.15 Aligned_cols=142 Identities=17% Similarity=0.131 Sum_probs=99.6
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
......+.+++|.+..+.+.+.+.+.....+..+++|+++||+ |||+++..+......+.. ...++
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------ 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------ 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh------------
Confidence 4555667778999999999999999998899999999999996 999887766555544432 11210
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
.+...++++..+.++|.|.. ++..+..+|.++++ | | .+..+++..+.+ .+++.+.+++
T Consensus 77 ---------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~---~---r---~~a~~~~~~~~~lG~~l~~~~~~~l 137 (368)
T TIGR00903 77 ---------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREE---R---R---DLVISLLSFAMYLGIIFALAAGLKI 137 (368)
T ss_pred ---------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHH---H---H---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13567888888999999865 44445557666532 2 3 556777777666 6666666666
Q ss_pred c---cchhhHHHHHHHHHHHH
Q 048319 173 K---PWNLRFGVSAICTVIAT 190 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~ 190 (348)
. ||+..|.+.++.-++..
T Consensus 138 ~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 138 YTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHccchHHHHHHHHHHHHHHH
Confidence 3 99999988555444333
No 41
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.85 E-value=6.4e-08 Score=96.40 Aligned_cols=137 Identities=10% Similarity=0.033 Sum_probs=105.7
Q ss_pred HhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCc
Q 048319 21 YLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPE 100 (348)
Q Consensus 21 Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~ 100 (348)
.+.+.+|++..+++.+.+.+.....+..+++|+++|| +|||+.+.++.++..++.++...+.
T Consensus 48 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~----------------- 109 (434)
T PRK11663 48 EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGIINILFGFSS----------------- 109 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHHHHHHHHHHh-----------------
Confidence 3445799999999999999999999999999999999 5999999999999999887766541
Q ss_pred ccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---c
Q 048319 101 CIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---P 174 (348)
Q Consensus 101 c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g 174 (348)
+...+++...+.+++.|..-|...+..+|.+++++ | .....+++.+.+ .+++.+.+++. |
T Consensus 110 -----~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------r---g~~~~~~~~~~~~g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 110 -----SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------R---GGWWAIWNTAHNVGGALIPLVVGAIALHYG 175 (434)
T ss_pred -----HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 24555666667788888888888999998886432 3 556777777666 55555555443 9
Q ss_pred chhhHHHHHHHHHHH
Q 048319 175 WNLRFGVSAICTVIA 189 (348)
Q Consensus 175 ~~~~F~i~~~~~~i~ 189 (348)
|++.|.+.++..++.
T Consensus 176 w~~~f~~~~i~~~~~ 190 (434)
T PRK11663 176 WRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999877654433
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.84 E-value=4.7e-08 Score=96.28 Aligned_cols=141 Identities=13% Similarity=0.159 Sum_probs=112.2
Q ss_pred hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcc
Q 048319 22 LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPEC 101 (348)
Q Consensus 22 l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c 101 (348)
+.+.+|.+..+.+...+.+.....+..++.|.++|| +||||.+..+.++..++.++...+
T Consensus 46 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~------------------- 105 (394)
T PRK10213 46 MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFAVLLTLSCLLVSFA------------------- 105 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 446799999999999999998888999999999999 599999999999999988776553
Q ss_pred cccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cc
Q 048319 102 IVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PW 175 (348)
Q Consensus 102 ~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~ 175 (348)
.+...+++...+.+++.|...|...++..|.+++++ + .....++....| .+++.+.+++. ||
T Consensus 106 ---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~---~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw 173 (394)
T PRK10213 106 ---NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------V---PKALSVIFGAVSIALVIAAPLGSFLGELIGW 173 (394)
T ss_pred ---ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH
Confidence 135678888889999999999999999998886432 3 556777777666 66666666653 99
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 048319 176 NLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf~ 194 (348)
++.|.+.++..++..+...
T Consensus 174 ~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 174 RNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999987766555444333
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.84 E-value=1.5e-07 Score=90.46 Aligned_cols=160 Identities=13% Similarity=0.048 Sum_probs=105.7
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH-HHHHHhhhhhhhhcc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVF-SSLAYSVGIGLLTMS 82 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~-~~~i~~~G~~ll~~s 82 (348)
.++-.+++... ..+..|+.+++|.+..+.+.+.+.+.....+..++.|.++||+ ||||.+.+ +..+..++.++...+
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHhc
Confidence 45556666667 7788899999999999999999999888888888999999995 99887655 445555555554443
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
. +...+++...+.+.+.+..-|...+...|..+++ ++.+ ..+..+.....|
T Consensus 85 ~----------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~ 135 (375)
T TIGR00899 85 R----------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRT----GREA---VMFSSVMRAQIS 135 (375)
T ss_pred c----------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhc----chhh---HHHHHHHHHHHh
Confidence 1 2344455445555566666666666666554321 1111 122445555555
Q ss_pred ---hhcchhhccc-c--cchhhHHHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYI-K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi-~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+++.+.+++ + ||++.|.+.++..++..++.+
T Consensus 136 ~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~ 173 (375)
T TIGR00899 136 LAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW 173 (375)
T ss_pred HHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 6666665555 3 999999998877666554433
No 44
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.84 E-value=8.6e-08 Score=93.65 Aligned_cols=152 Identities=12% Similarity=0.094 Sum_probs=112.3
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+...+.+++|.+.++.+.+.+.+....-+..+++|+++||+ ||||++.++..+..++.++...+.
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~------------ 89 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSS------------ 89 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 3345566778999999999999999999999999999999995 999999999999999988776541
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...++++..+.+++.|...|...+...|.+++++ + .+....+..+.+ .+++.+..++
T Consensus 90 ----------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 90 ----------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------V---TAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred ----------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------h---hHHHHHHHHHHHHHHHHhccHHHHH
Confidence 35677888889999999887777777766554321 2 345555555444 4555554444
Q ss_pred c---cchhhHHHHHHHHHHHHHHHHhcCcc
Q 048319 173 K---PWNLRFGVSAICTVIATLLFLSGTCT 199 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~~vf~~g~~~ 199 (348)
- ||++.|.+.++..++..+......|.
T Consensus 151 ~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 151 SQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 99999999887666555444433343
No 45
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.82 E-value=1.6e-07 Score=93.47 Aligned_cols=159 Identities=12% Similarity=0.150 Sum_probs=101.9
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhC---CchHHHHHHHHHHHHHHH---HHhhhHHHHHhhhccchHHHHHHHHHHhhhhh
Q 048319 4 LLWADCLAQFVMWTMMEYLTEVWK---ISVVHAAGIVNIFSGLVL---VLQLPMQYLVDTIISKYWMLVFSSLAYSVGIG 77 (348)
Q Consensus 4 ~e~~Er~a~yg~~~L~~Yl~~~l~---~~~~~A~~i~~~~~~~~~---~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ 77 (348)
+|..||.. + +.+..++.++++ .+..+...+...+..... +..+++|+++||+ ||||++.++.+++.++.+
T Consensus 33 ~~~~d~~~-~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 33 VEWFDFYV-Y--SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHH-H--HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 45555554 3 334456667764 555544444444433333 5667888999995 999999999999999988
Q ss_pred hhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHH
Q 048319 78 LLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLL 157 (348)
Q Consensus 78 ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~ 157 (348)
+..++ |+... - .......+++...+.++|.|+.-|...++++|.+++++ | ..+..+.
T Consensus 109 ~~~~~--~~~~~----~--------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------r---g~~~~~~ 165 (432)
T PRK10406 109 VIACL--PGYET----I--------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------K---GFYASFQ 165 (432)
T ss_pred HHhhc--CCchh----H--------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------c---cHHHHHH
Confidence 87664 11100 0 00112457778889999999999999999998876432 3 4456666
Q ss_pred HHHHh---hhcchhhc----cc------c-cchhhHHHHHHHHHHH
Q 048319 158 LFMVP---VAAIIPIS----YI------K-PWNLRFGVSAICTVIA 189 (348)
Q Consensus 158 y~~in---~~~~~~~~----yi------~-g~~~~F~i~~~~~~i~ 189 (348)
+...+ +++..+.. ++ . ||++.|.+.++..++.
T Consensus 166 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 166 YVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 66655 33332211 11 2 9999999877755544
No 46
>PRK03699 putative transporter; Provisional
Probab=98.81 E-value=1.9e-07 Score=91.62 Aligned_cols=154 Identities=15% Similarity=0.144 Sum_probs=110.3
Q ss_pred HHHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 7 ADCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 7 ~Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
++....+.+..+..-+.+++|++..+.+.+.+.+.....+..+++|+++|| +||||++.++.++..++.+++..+.
T Consensus 18 ~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~~~~i~~~l~~~~~--- 93 (394)
T PRK03699 18 LTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFALMILAVAGLMFSH--- 93 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHcc---
Confidence 333333334333444567899999999999999988888999999999999 5999999999999998888776541
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---h
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---V 163 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~ 163 (348)
+...++++..+.+++.|...+...+...|.+++++ | ....+..+...+ .
T Consensus 94 -------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r---~~~~~~~~~~~~~g~~ 145 (394)
T PRK03699 94 -------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------R---GSRLLFTDSFFSMAGM 145 (394)
T ss_pred -------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------H---HHHHHHHHHHHHHHHH
Confidence 34567778888999999999999999999885421 2 233333333333 4
Q ss_pred hcchhhccc--c--cchhhHHHHHHHHHHHHHH
Q 048319 164 AAIIPISYI--K--PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 164 ~~~~~~~yi--~--g~~~~F~i~~~~~~i~~~v 192 (348)
+++...+++ + ||++.|.+.++..++..++
T Consensus 146 ~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 146 IFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 444444443 2 8999999877666554443
No 47
>PRK11043 putative transporter; Provisional
Probab=98.80 E-value=9.4e-08 Score=93.63 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=106.0
Q ss_pred hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcc
Q 048319 22 LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPEC 101 (348)
Q Consensus 22 l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c 101 (348)
+.+++|.+..+++.+.+.+.....+..+++|+++|| +|||+.+..+..+..++.++...+.
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~------------------ 92 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFALGSLGMLWVE------------------ 92 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 567899999999999999999999999999999999 5999999999999888887766531
Q ss_pred cccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cc
Q 048319 102 IVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PW 175 (348)
Q Consensus 102 ~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~ 175 (348)
+...++++..+.++|.|..-+...++..|.++++. + .+.++......+ .+++.+.+++. ||
T Consensus 93 ----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~ 159 (401)
T PRK11043 93 ----SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------A---NRVFATIMPLVALSPALAPLLGAWLLNHFGW 159 (401)
T ss_pred ----CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 24566777788888888877777788888776432 2 344555444444 55665555553 99
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 048319 176 NLRFGVSAICTVIATLLF 193 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf 193 (348)
+..|.+.++..++..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~ 177 (401)
T PRK11043 160 QAIFATLFAITLLLILPT 177 (401)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999998776666555443
No 48
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.77 E-value=7.2e-08 Score=94.80 Aligned_cols=137 Identities=16% Similarity=0.122 Sum_probs=105.2
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchh
Q 048319 28 ISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHK 107 (348)
Q Consensus 28 ~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~ 107 (348)
.+..+.+.+.+.+.....+..+++|+++|| +|||+++.++.++..+|.++....+. ....
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~ 127 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVIGAILMGLAAF-------------------ALSV 127 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHHHHHHHHHhcc-------------------ccch
Confidence 338999999999999999999999999999 59999999999999999888765421 1123
Q ss_pred HHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh---ccc-c--cchhh
Q 048319 108 ILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI---SYI-K--PWNLR 178 (348)
Q Consensus 108 ~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~---~yi-~--g~~~~ 178 (348)
+.++++..+.++|.|..-+...++.+|.+++++ | .....+++.+.+ ++++.+. ... . ||++.
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~ 198 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------R---GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIP 198 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------h---hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHH
Confidence 577888999999999999999999998876442 3 456667666666 5555554 333 2 99999
Q ss_pred HHHHHHHHHHHHHHH
Q 048319 179 FGVSAICTVIATLLF 193 (348)
Q Consensus 179 F~i~~~~~~i~~~vf 193 (348)
|.+.++..++..+..
T Consensus 199 f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 199 LGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999666555554433
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=98.75 E-value=2.2e-07 Score=93.10 Aligned_cols=100 Identities=14% Similarity=0.175 Sum_probs=85.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+...+++.+|.+..+++.+...+.....+..++.|.++||+ ||||++.++..++.+|.++...++.
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~~----------- 113 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAE----------- 113 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 3455566788999999999999999999999999999999995 9999999999999999987642211
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHh
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQ 135 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq 135 (348)
..+...+++++.+.++|.|...+..+++++|.
T Consensus 114 --------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~ 145 (438)
T PRK10133 114 --------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVL 145 (438)
T ss_pred --------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 01357788999999999999999999999874
No 50
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.72 E-value=2e-07 Score=93.31 Aligned_cols=144 Identities=10% Similarity=-0.006 Sum_probs=101.7
Q ss_pred hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC--ccCCCCCCCCCCCCcccc
Q 048319 26 WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP--VLAGFVGTCSEYKPECIV 103 (348)
Q Consensus 26 l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p--~~~~~~~~c~~~~~~c~~ 103 (348)
+|.+..+.+.+.+.+.....+.++++|+++|| +||||+++++.+++.++.++....... ...+ + +
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--~----------~ 116 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--D----------N 116 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHhhccccccccc--c----------c
Confidence 38889999999999999999999999999999 599999999999999887766653221 0000 0 1
Q ss_pred cchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhc---------c
Q 048319 104 KGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPIS---------Y 171 (348)
Q Consensus 104 ~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~---------y 171 (348)
......++++..+.++|.|+.-|...++++|.++++. | ......+-.+.. ++++.+.. .
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------r---g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 187 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------R---GKLVSFNQFAIIFGQLVVYFVNYFIARSGDASW 187 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------h---hHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 1234567788899999999999999999999887532 2 233333333322 33322211 1
Q ss_pred cc--cchhhHHHHHHHHHHHHH
Q 048319 172 IK--PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 172 i~--g~~~~F~i~~~~~~i~~~ 191 (348)
++ ||++.|.+.++..++..+
T Consensus 188 ~~~~gWr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 188 LNTDGWRYMFASEAIPALLFLM 209 (479)
T ss_pred cccCChHHHHHHHHHHHHHHHH
Confidence 12 899999987766665544
No 51
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.72 E-value=1.9e-07 Score=93.52 Aligned_cols=143 Identities=9% Similarity=-0.010 Sum_probs=105.3
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
...|+.+. |++..+.+.+.+.+....-+..+++|+++||+ ||||++.++.++..++.+++.+...
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~------------- 115 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW------------- 115 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc-------------
Confidence 34567777 99999999999999999999999999999995 9999999999999988887765421
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hhcchhhccc-
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VAAIIPISYI- 172 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~~~~~~~yi- 172 (348)
...+...+++...+.+++.|..-|.......|.+++++ | ....++++.+.+ +.++.....+
T Consensus 116 -----~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~~~~~l~~~~~~ 181 (452)
T PRK11273 116 -----ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------R---GGIVSVWNCAHNVGGGLPPLLFLLGMA 181 (452)
T ss_pred -----ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------H---HHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 01134566777788899999988888888888775432 3 556777666666 2223221111
Q ss_pred -c-cchhhHHHHHHHHHHH
Q 048319 173 -K-PWNLRFGVSAICTVIA 189 (348)
Q Consensus 173 -~-g~~~~F~i~~~~~~i~ 189 (348)
. ||++.|.+.++..++.
T Consensus 182 ~~~gw~~~f~i~~~~~~~~ 200 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILV 200 (452)
T ss_pred HhccHHHHHHHHHHHHHHH
Confidence 2 9999999877665554
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.71 E-value=4.2e-07 Score=88.73 Aligned_cols=156 Identities=13% Similarity=0.005 Sum_probs=106.6
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHH-----HHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhh
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHA-----AGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIG 77 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A-----~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ 77 (348)
..++..+++... ..+-.|++ ++|.+..++ +.+.+.+.....+..++.|+++|| +|||+.+..+.++..++.+
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-KGRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hCcHHHHHHHHHHHHHHHH
Confidence 345555666555 55555654 588886553 566677777778888899999999 5999999999999888887
Q ss_pred hhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHH
Q 048319 78 LLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLL 157 (348)
Q Consensus 78 ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~ 157 (348)
++..+. +...++++..+.+++.+. -|...+...|++++++ + .+...++
T Consensus 100 ~~~~~~----------------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------~---~~~~~~~ 147 (408)
T PRK09874 100 LMGLAQ----------------------NIWQFLILRALLGLLGGF-VPNANALIATQVPRNK------S---GWALGTL 147 (408)
T ss_pred HHHHHh----------------------hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhh------h---hHHHHHH
Confidence 765431 245667777778887554 4666677777664321 3 4455666
Q ss_pred HHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHH
Q 048319 158 LFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 158 y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf 193 (348)
....+ .+++.+.+++. ||+..|.+.++..+++.+..
T Consensus 148 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (408)
T PRK09874 148 STGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVT 189 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 66555 56666666553 99999998887766655433
No 53
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.70 E-value=1.7e-07 Score=90.19 Aligned_cols=153 Identities=12% Similarity=0.107 Sum_probs=112.6
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
+|--.++.. ..+...+.+++|++..+++.+.+.+.....+..++.|+++|| +||||++.++.++..+|.++. .. +
T Consensus 10 ~~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~-~~--~ 85 (355)
T TIGR00896 10 LNLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAAGILIR-SA--P 85 (355)
T ss_pred hcccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHHHHHHH-Hh--c
Confidence 444456666 777778888999999999999999999999999999999999 599999999998888887655 21 1
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
+...++++..+.++|.|...+..+....|.++++ + .+..+++....+
T Consensus 86 --------------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~g~ 135 (355)
T TIGR00896 86 --------------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQR-------V---GLMTGLYSMALMGGA 135 (355)
T ss_pred --------------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcch-------h---hHHHHHHHHHHHHHH
Confidence 2355677788889999988888888777666421 3 446666666665
Q ss_pred hhcchhhcccc-----cchhhHHHHHHHHHHHHHHH
Q 048319 163 VAAIIPISYIK-----PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 163 ~~~~~~~~yi~-----g~~~~F~i~~~~~~i~~~vf 193 (348)
.+++.+.+++. +|+..|.+.++..++....+
T Consensus 136 ~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~ 171 (355)
T TIGR00896 136 ALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW 171 (355)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 45554444442 49999887666555444333
No 54
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.69 E-value=5.5e-07 Score=91.04 Aligned_cols=152 Identities=9% Similarity=0.076 Sum_probs=101.5
Q ss_pred HHHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 7 ADCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 7 ~Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
+.-+..+++.++..++.+++|++.++.+.+...+.....+..+++|+++|| +|||+++.++.++..++.++...+.
T Consensus 47 ~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~~~~~~~~~~--- 122 (476)
T PLN00028 47 TCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAPAVFCMSLVS--- 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhc---
Confidence 334444444555667888999999999988887777777788999999999 5999999999999888877666542
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---h
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---V 163 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~ 163 (348)
+...+++...+.++|.|..-+ .....++.++++. | ......++...| .
T Consensus 123 -------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------r---g~a~g~~~~~~~~g~~ 173 (476)
T PLN00028 123 -------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------V---GTANGIAAGWGNLGGG 173 (476)
T ss_pred -------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------e---eHHHHHHHHHHHHHHH
Confidence 234566666778888776533 3445666665321 2 344555444333 2
Q ss_pred hcchhhccc------------ccchhhHHHHHHHHHHHHH
Q 048319 164 AAIIPISYI------------KPWNLRFGVSAICTVIATL 191 (348)
Q Consensus 164 ~~~~~~~yi------------~g~~~~F~i~~~~~~i~~~ 191 (348)
++..+.+.+ .||++.|.+.++..++..+
T Consensus 174 ~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 174 VTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 222222211 1799999998876665443
No 55
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.69 E-value=9e-07 Score=84.94 Aligned_cols=165 Identities=16% Similarity=0.100 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHhHHHHHHHhhhhhCC--chHHHHHHH--HHHHHH---HHHHhhhHHHHHhhhccchHHHHHHHHHHhh
Q 048319 2 AALLWADCLAQFVMWTMMEYLTEVWKI--SVVHAAGIV--NIFSGL---VLVLQLPMQYLVDTIISKYWMLVFSSLAYSV 74 (348)
Q Consensus 2 ~~~e~~Er~a~yg~~~L~~Yl~~~l~~--~~~~A~~i~--~~~~~~---~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~ 74 (348)
-++|.+||+.+ ..+..|+.++... ++++.+.+. ..+... ..+..++.|+++|| +||||++.++.++..+
T Consensus 2 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~ 77 (394)
T TIGR00883 2 NAVEWFDFYLY---GFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGI 77 (394)
T ss_pred cchhHHHHHHH---HHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHH
Confidence 45788888533 2334444444332 233332222 222221 12467889999999 5999999999999999
Q ss_pred hhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHH
Q 048319 75 GIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFF 154 (348)
Q Consensus 75 G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f 154 (348)
+.++...+.. ... . .......++++..+.++|.|..-+...++.+|.+++++ | ....
T Consensus 78 ~~~~~~~~~~--~~~-------~-----~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r---~~~~ 134 (394)
T TIGR00883 78 GTLLIGLLPS--YAT-------I-----GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------R---GFYG 134 (394)
T ss_pred HHHHHhhCCC--hhh-------h-----HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------c---hHHH
Confidence 9888776521 000 0 00112356777788999999999999999998776432 3 4455
Q ss_pred HHHHHHHh---hhcchhhcc---------cc--cchhhHHHHHHHHHHHHHHH
Q 048319 155 KLLLFMVP---VAAIIPISY---------IK--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 155 ~~~y~~in---~~~~~~~~y---------i~--g~~~~F~i~~~~~~i~~~vf 193 (348)
.++..+.+ .+++.+... ++ ||++.|.+.++..+++..+.
T Consensus 135 ~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 187 (394)
T TIGR00883 135 SFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLR 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 55555544 334332221 12 89999998877766665543
No 56
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.69 E-value=1.6e-07 Score=92.67 Aligned_cols=150 Identities=12% Similarity=0.032 Sum_probs=106.8
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
....+..+++.+..+++.+...+.....+..+++|+++||+ ||||.+.++..+..++..++.+.... .
T Consensus 39 ~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~~~~~~~---~-------- 106 (417)
T PRK10489 39 AVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGLALNAFL---P-------- 106 (417)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHHHHHHHc---C--------
Confidence 34444456888999999999999999999999999999995 99999999988888877665432110 0
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK- 173 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~- 173 (348)
......+++...+.+++.|...|...+...|.+++++ + .+...++++..+ .+++.+.+++-
T Consensus 107 ------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 107 ------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------L---MQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------H---HHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 0124556666777788888777888888777665422 3 455666666666 56666665543
Q ss_pred --cchhhHHHHHHHHHHHHHHHH
Q 048319 174 --PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf~ 194 (348)
||++.|.+.++..+++.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~ 194 (417)
T PRK10489 172 AGGVAWNYGLAAAGTFITLLPLL 194 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHH
Confidence 899999988877776655443
No 57
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.68 E-value=3.5e-07 Score=97.27 Aligned_cols=100 Identities=11% Similarity=-0.095 Sum_probs=85.7
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
+.+..++...+|++..+++.+.+.+.....+..+++|+++|| +||+++++++.++..++.++..++.
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i~~ll~afa~------------ 253 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGFFAFFSSFVQ------------ 253 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 445566777899999999999999999999999999999999 5999999999999998887766531
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEI 138 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~ 138 (348)
+...++++.++.++|.|+.-|...++.+|.++.
T Consensus 254 ----------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~ 286 (742)
T TIGR01299 254 ----------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQ 286 (742)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence 246778888999999999999999999988764
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.68 E-value=8.5e-07 Score=87.31 Aligned_cols=134 Identities=13% Similarity=0.037 Sum_probs=101.7
Q ss_pred hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcc
Q 048319 22 LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPEC 101 (348)
Q Consensus 22 l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c 101 (348)
+..++|.+....+.+...+.....++.+++|+++|| +||||+++++..+..++.+++....
T Consensus 29 ~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~~~~~~~~~~------------------ 89 (393)
T PRK11195 29 LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLLGCLLMLFGI------------------ 89 (393)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHHHHHHHHHHH------------------
Confidence 356789999999999999999999999999999999 5999999999999988877654421
Q ss_pred cccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc--cch
Q 048319 102 IVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK--PWN 176 (348)
Q Consensus 102 ~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~--g~~ 176 (348)
+ .++...+.++|.|+..|...++..|.+++++ + .+...+.....+ .+|+.+.+++- .|+
T Consensus 90 ----~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~---~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~ 153 (393)
T PRK11195 90 ----H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------L---VKANGWMEGSTIAAILLGTVLGGALADPHAE 153 (393)
T ss_pred ----H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1455678899999999999999999997643 3 556666655555 56666555543 677
Q ss_pred hhHHHHHHHHHHHH
Q 048319 177 LRFGVSAICTVIAT 190 (348)
Q Consensus 177 ~~F~i~~~~~~i~~ 190 (348)
..|.+.+...+++.
T Consensus 154 ~~~~i~~~~~~~~~ 167 (393)
T PRK11195 154 AALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 77776665554443
No 59
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.68 E-value=7e-07 Score=87.47 Aligned_cols=161 Identities=11% Similarity=0.008 Sum_probs=107.9
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..++.-.++..+ ..+..|+++++|++..+.+.+.+.+.....+..+++|+++|| +||||.++.+.....++...+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~ 88 (396)
T TIGR00882 10 FFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLVLFAPFFIY 88 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666 778889999999999999999999999999999999999999 599999998877766654432221
Q ss_pred cC-CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 83 TP-PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 83 ~~-p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
.. |... ......+.++..+.+++.+...|....+..|.- + + + ...|++.....
T Consensus 89 ~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~-~---~---~~~~g~~~~~~ 142 (396)
T TIGR00882 89 VFGPLLQ---------------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS----R-N---S---NFEYGKARMFG 142 (396)
T ss_pred HhhhHHH---------------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh----h-h---c---ccccchhhhhc
Confidence 11 1000 001223344455677777877777766654421 1 1 1 22455555666
Q ss_pred h---hhcchhhcccc--cchhhHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK--PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 162 n---~~~~~~~~yi~--g~~~~F~i~~~~~~i~~~ 191 (348)
| .+++.+.+.+. ||+..|.+.++..++..+
T Consensus 143 ~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 143 CVGWALCASIAGILFSIDPQIVFWLGSGFALILML 177 (396)
T ss_pred ccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHH
Confidence 6 55665555553 999999987766665543
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.67 E-value=3.7e-07 Score=90.27 Aligned_cols=73 Identities=14% Similarity=0.037 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhh
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIG 77 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ 77 (348)
.-++-.++++.. ..+..|+++++|++..+.+.+.+.+.....+.+++.|+++|| +||||+++++..+..++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~~~~ 91 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLVLFG 91 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHH
Confidence 345566777777 889999999999999999999999999999999999999999 5999999887776665544
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.67 E-value=8.9e-07 Score=86.37 Aligned_cols=137 Identities=13% Similarity=0.007 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..+...+++..+ ..+-.|+. ++|.+..+++.+.+.+.....+.+++.|+++|| +||||.+..+.++..++..+...+
T Consensus 14 ~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~~~~~~~~~~ 91 (381)
T PRK03633 14 GLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFAAGCAGLGLM 91 (381)
T ss_pred HHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456677777666 66666665 689999999999999999999999999999999 599999999999999988776653
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
. +...++++..+.++|.|...|...+...|..+++ +| .+.++++....|
T Consensus 92 ~----------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~ 140 (381)
T PRK03633 92 V----------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR------NR---GRLLAAYMMVYY 140 (381)
T ss_pred c----------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HH---HHHHHHHHHHHH
Confidence 1 3566777888999999988887777776665432 13 556777777777
Q ss_pred ---hhcchhhcccc
Q 048319 163 ---VAAIIPISYIK 173 (348)
Q Consensus 163 ---~~~~~~~~yi~ 173 (348)
.+++.+.+++.
T Consensus 141 ~g~~~g~~~~~~l~ 154 (381)
T PRK03633 141 LGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHhccc
Confidence 66666666554
No 62
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.67 E-value=8.2e-07 Score=85.43 Aligned_cols=149 Identities=16% Similarity=0.102 Sum_probs=97.5
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh----ccchHHH-HHHHHHHhhhhhhhhcccCCccCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI----ISKYWML-VFSSLAYSVGIGLLTMSTPPVLAGF 90 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~----lGr~~ti-~~~~~i~~~G~~ll~~s~~p~~~~~ 90 (348)
......+.+++|++.++.+..... +..+...++.|.++||+ +||||.+ +.+.++..+....+.... +
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~--~~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~-~----- 79 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV--GLPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV-P----- 79 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH--HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC-c-----
Confidence 445555566789999998888544 34444578999999997 6999985 566666666655554321 1
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcch
Q 048319 91 VGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAII 167 (348)
Q Consensus 91 ~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~ 167 (348)
..+...++....+.+++.+...|...++..|.+++++ | .....+...+.+ ++++.
T Consensus 80 -------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r---~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 80 -------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------L---GYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred -------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------h---chHHHHHHHHHHHHHHHHHH
Confidence 1133444444456677888888999999998885432 3 445566555555 44444
Q ss_pred hhcccc---c--------chhhHHHHHHHHHHHHHHHH
Q 048319 168 PISYIK---P--------WNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 168 ~~~yi~---g--------~~~~F~i~~~~~~i~~~vf~ 194 (348)
+..++. | |+..|.+.++..+++.++.+
T Consensus 138 l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 138 LALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 444332 5 99999999887777665444
No 63
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.67 E-value=5.2e-07 Score=86.09 Aligned_cols=150 Identities=14% Similarity=0.048 Sum_probs=107.5
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
+++... ..+..|. +.+|.+..+++.+...+.....+..+++|+++|| +||++++.++.++..++.+++.....
T Consensus 219 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~---- 292 (377)
T TIGR00890 219 VSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAVGMAAMLFIPM---- 292 (377)
T ss_pred HHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHccc----
Confidence 344444 4444554 4588999888888888888888999999999999 59999999999999888877654311
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
.....++....+.+++.|..-+..+++..|.+++++ + .+.+.+++...+ .++
T Consensus 293 ----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~---~~~~g~~~~~~~~g~~~~ 347 (377)
T TIGR00890 293 ----------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------S---AANYGFLYTAKAVAGIFG 347 (377)
T ss_pred ----------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------h---hhHhHHHHHHHHHHHHHH
Confidence 112234445566777888877777888888776543 3 456666666655 666
Q ss_pred chhhcccc---cchhhHHHHHHHHHHHH
Q 048319 166 IIPISYIK---PWNLRFGVSAICTVIAT 190 (348)
Q Consensus 166 ~~~~~yi~---g~~~~F~i~~~~~~i~~ 190 (348)
+.+.+++. ||+..|.+.++..++++
T Consensus 348 ~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 348 GLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 66666553 99999998887777654
No 64
>TIGR00898 2A0119 cation transport protein.
Probab=98.67 E-value=2.8e-07 Score=93.08 Aligned_cols=140 Identities=18% Similarity=0.158 Sum_probs=104.8
Q ss_pred hhhhhCCc---hHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 22 LTEVWKIS---VVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 22 l~~~l~~~---~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
+.+++|++ ..+++.+.+.+.....+..++.|+++|| +|||+.++++.++..++.++..++.
T Consensus 115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i~~~~~~~~~--------------- 178 (505)
T TIGR00898 115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAVSGVLTAFSP--------------- 178 (505)
T ss_pred EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHcc---------------
Confidence 34568888 8889999999999999999999999999 6999999999999998887766531
Q ss_pred CcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccccc
Q 048319 99 PECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIKPW 175 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~g~ 175 (348)
+...+++...+.++|.|+.-+...++..|.++++. | .....++..+.+ ++++.+..++.+|
T Consensus 179 -------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r---~~~~~~~~~~~~~g~~~~~~~~~~~~~w 242 (505)
T TIGR00898 179 -------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------R---AIVGTLIQVFFSLGLVLLPLVAYFIPDW 242 (505)
T ss_pred -------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------h---HHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 35678888899999999999999999998876532 2 233333322222 4444443344489
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 048319 176 NLRFGVSAICTVIATLLF 193 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf 193 (348)
++.|.+.++..++..+..
T Consensus 243 r~~~~~~~i~~~~~~~~~ 260 (505)
T TIGR00898 243 RWLQLAVSLPTFLFFLLS 260 (505)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999998777666554433
No 65
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.66 E-value=3.6e-07 Score=91.03 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=107.0
Q ss_pred HHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 19 MEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 19 ~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
..|+++ +|.+..+.+.+.+.+.....+..+++|+++|| +||++.+.++.++..++.+++... |..
T Consensus 50 ~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~--~~~----------- 114 (438)
T TIGR00712 50 MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAAVMLLMGFV--PWA----------- 114 (438)
T ss_pred hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHHHHHHHhcc--ccc-----------
Confidence 455665 59999999999999999999999999999999 599999999999999888776543 111
Q ss_pred CcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcc-cc-
Q 048319 99 PECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISY-IK- 173 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~y-i~- 173 (348)
......+++...+.+++.|..-|.......|.+++++ | ...+++++...+ .+++.+... +.
T Consensus 115 -----~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------r---g~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 115 -----TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------R---GTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred -----cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------c---hhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 0124456677778899999988888888888776432 3 557777777666 444433332 32
Q ss_pred --cchhhHHHHHHHHHHHHH
Q 048319 174 --PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~ 191 (348)
||+.+|.+.++..++..+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 899999997777665443
No 66
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.66 E-value=4.6e-07 Score=88.61 Aligned_cols=163 Identities=12% Similarity=0.032 Sum_probs=110.0
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
.++++++ ..+..|+.+ .|++ .++.....+.....+..++.|+++|| +||+|.+.++..+..++.+++....
T Consensus 229 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (399)
T PRK05122 229 SIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEILGLLLLWLAP---- 300 (399)
T ss_pred HHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhc----
Confidence 3455556 666667654 4553 34455556666667778899999999 5999999999888888877766531
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hh
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VA 164 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~ 164 (348)
+...++++..+.++|.|..-|.......|.+++ | ++ .+.+.+++...+ .+
T Consensus 301 ------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~----~--~~---g~~~g~~~~~~~~g~~~ 353 (399)
T PRK05122 301 ------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPP----Q--NR---GAALGAYSVFLDLSLGI 353 (399)
T ss_pred ------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH----H--HH---HHHHHHHHHHHHHHHHH
Confidence 134456677788888888777766666654432 2 23 567777776666 44
Q ss_pred cchhhcccc---cchhhHHHHHHHHHHHHHHHHhcCcccccCCCC
Q 048319 165 AIIPISYIK---PWNLRFGVSAICTVIATLLFLSGTCTYENKEPE 206 (348)
Q Consensus 165 ~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~ 206 (348)
++.+.+++- ||+..|.+.++..+++++....-+++.+++.|+
T Consensus 354 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (399)
T PRK05122 354 TGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVPE 398 (399)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCCC
Confidence 555555553 999999998888888777666555555555443
No 67
>PRK03699 putative transporter; Provisional
Probab=98.61 E-value=5.7e-07 Score=88.25 Aligned_cols=153 Identities=16% Similarity=0.082 Sum_probs=108.9
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
++.-++++++ ..+..|+++.+|++..+++.+...+.....+..+++|+++|| +||++.+..+..+..++..++....
T Consensus 215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~~~~- 292 (394)
T PRK03699 215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALVLMYLFVNTD- 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHcC-
Confidence 4455677888 878899998999999999999999988899999999999999 5999999888877776655554321
Q ss_pred CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh--
Q 048319 85 PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-- 162 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-- 162 (348)
+.....+...+.+++.++.-|...+.+.++.+++. ....++.+.+.+
T Consensus 293 ---------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~----------~~~~g~~~~~~~~g 341 (394)
T PRK03699 293 ---------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVAS----------PKLVNFILTCGTIG 341 (394)
T ss_pred ---------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC----------HHHHHHHHHhhhHH
Confidence 12233445556677777777777777777665332 122344444444
Q ss_pred -hhcchhhcccc---cchhhHHHHHHHHHHHHH
Q 048319 163 -VAAIIPISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 163 -~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.+++.+.+++- ||..+|.+.++.++++.+
T Consensus 342 ~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 342 TMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 67777777664 888888876666665543
No 68
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.60 E-value=2e-06 Score=84.35 Aligned_cols=159 Identities=14% Similarity=0.136 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHH-HHHHhhhHHHHHhhhccchHHHH-HHHHHHhhhhhhh
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGL-VLVLQLPMQYLVDTIISKYWMLV-FSSLAYSVGIGLL 79 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~-~~~~pl~gg~lAD~~lGr~~ti~-~~~~i~~~G~~ll 79 (348)
+..++-+++..-+ ..+..|+.+++|.+.++.+.+++..... ..+.+++|++ +||+ ||||.++ .+.++..++..++
T Consensus 22 ~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~~~~~~ 99 (393)
T PRK15011 22 IVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVLACTLF 99 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHHHHHHH
Confidence 3467778887777 8889999999999999999987765554 4455666777 9995 9988865 4445545555544
Q ss_pred hcccCCccCCCCCCCCCCCCcccccchhHHH-HHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHH-HHH
Q 048319 80 TMSTPPVLAGFVGTCSEYKPECIVKGHKILF-YAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFF-KLL 157 (348)
Q Consensus 80 ~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~-~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f-~~~ 157 (348)
..+. +...+ ..++.+-+.+ +...|...+...|..+++ +| . ...+ .+.
T Consensus 100 ~~~~----------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~--~---~~~~~~~~ 148 (393)
T PRK15011 100 AWNR----------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKT---GR--E---AVMFSSFL 148 (393)
T ss_pred HHhh----------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhc---cc--h---HHHHHHHH
Confidence 4321 12333 3333333333 344566666665544322 11 1 2233 455
Q ss_pred HHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 158 LFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 158 y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
..+.+ .+++.+.+++. ||+..|.+.++..++..+..+
T Consensus 149 ~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 191 (393)
T PRK15011 149 RAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVW 191 (393)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 55666 66776666663 999999988776655544443
No 69
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.60 E-value=5.7e-07 Score=90.37 Aligned_cols=144 Identities=13% Similarity=0.058 Sum_probs=101.0
Q ss_pred HHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 19 MEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 19 ~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
...+.+.+|.+.++++.+.+.+....++..+++|+++|| +|||++++.+.++..++.+++..+.
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~--------------- 105 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASLGMILASFSS--------------- 105 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHHHHHHHHHhh---------------
Confidence 344557899999999999999988888888899999999 5999999999999888887765531
Q ss_pred CcccccchhHHHHHHH-HHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-
Q 048319 99 PECIVKGHKILFYAAL-GLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK- 173 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L-~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~- 173 (348)
+...+++.. .+.++|.|..-+...+...+-++ ++ | .+...+++.+.+ .+++.+.+++-
T Consensus 106 -------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~----~~---r---~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 106 -------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY----RR---R---PLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred -------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH----hh---H---HHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 123344333 56688888654544556666553 11 3 455666666665 44444444443
Q ss_pred --cchhhHHHHHHHHHHHHHHHHh
Q 048319 174 --PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
||++.|.+.++..+++.+..+.
T Consensus 169 ~~gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 169 SFGWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877765544433
No 70
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.59 E-value=7e-07 Score=88.17 Aligned_cols=167 Identities=16% Similarity=0.210 Sum_probs=109.0
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHH-HHHHHHHHhhhhhhhh
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWM-LVFSSLAYSVGIGLLT 80 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~t-i~~~~~i~~~G~~ll~ 80 (348)
+...+.+.-+ ..+..|+++.+|++.+.++.+........-+..++.|+++||. +||||. ++++.....++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 3444555555 6788899999999999999999999999999999999999984 799764 6677788887777765
Q ss_pred cccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 81 MSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 81 ~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
.. |... ...+...+++...+..++.+...+...++.+|..+ |++|| .+...+....
T Consensus 89 ~~--~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~~~R------~~~~~~~~~~ 144 (437)
T TIGR00792 89 TT--PDFS--------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITL--DPRER------ESLSTFRRFG 144 (437)
T ss_pred hC--CCCC--------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccC--CHHHH------HHHHHHHHHH
Confidence 43 2110 01123444445556677777777777788777654 34443 3344444443
Q ss_pred Hh---hhcchh----hccc-----c-cchhhHHHHHHHHHHHHHHHHhc
Q 048319 161 VP---VAAIIP----ISYI-----K-PWNLRFGVSAICTVIATLLFLSG 196 (348)
Q Consensus 161 in---~~~~~~----~~yi-----~-g~~~~F~i~~~~~~i~~~vf~~g 196 (348)
.+ +++..+ ...+ . ||+..|.+.++..++..++....
T Consensus 145 ~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 193 (437)
T TIGR00792 145 ATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG 193 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence 33 222111 1111 1 89998888777666655544433
No 71
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.59 E-value=3e-06 Score=83.45 Aligned_cols=125 Identities=7% Similarity=0.019 Sum_probs=87.4
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
-++++.. ..+..|+ +++|.+..+++.+.+.+.....+..+++|.++|| +||||.+..+..+..++.+++...+..
T Consensus 26 ~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l~~~~~~~~~~~~~~~~~~~~-- 101 (402)
T TIGR00897 26 MTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTMMIGLLLWCVGHAAFIVFGLG-- 101 (402)
T ss_pred HHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence 3344434 4455666 5689999999999999999999999999999999 599999999999998887654322110
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
..+...+++...+.++|.+..-+...+...+.++++ | | .+...++..+.+
T Consensus 102 ----------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~---~---~---g~~~g~~~~~~~ 151 (402)
T TIGR00897 102 ----------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD---N---L---SSAVGWFWAVYS 151 (402)
T ss_pred ----------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH---H---H---HHHHHHHHHHHH
Confidence 012345555666678887776666666666655432 2 3 556666666666
No 72
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.59 E-value=1.8e-06 Score=81.20 Aligned_cols=159 Identities=19% Similarity=0.170 Sum_probs=125.5
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchH-HHHHHHHHHhhhhhhhhc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYW-MLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~-ti~~~~~i~~~G~~ll~~ 81 (348)
..++...++.+. ..+..|+.+.+|.+..+++.+.........+..++.++++|| +||++ .+.++..+..++.+++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHH
Confidence 345566667777 777778877779999999999999999999999999999999 59999 999999999998887765
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
.. +....++...+.+++.+...+...++..|.+++++ + .+.+..+....
T Consensus 262 ~~----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~ 310 (352)
T cd06174 262 AP----------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------R---GTASGLFNTFG 310 (352)
T ss_pred hc----------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------H---HHHHHHHHHHH
Confidence 31 24567778889999999999999999998877532 3 55666666665
Q ss_pred h---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 162 n---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ .+++.+.+++. ||+..|.+.++..+++.++..
T Consensus 311 ~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 311 SLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 5 66666666553 999999998888887776543
No 73
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.57 E-value=7.7e-07 Score=90.15 Aligned_cols=170 Identities=15% Similarity=0.078 Sum_probs=116.3
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhh---hccchHHHHHH-HHHHhhhhhhhhcccCCc--cCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDT---IISKYWMLVFS-SLAYSVGIGLLTMSTPPV--LAG 89 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~---~lGr~~ti~~~-~~i~~~G~~ll~~s~~p~--~~~ 89 (348)
+++..|+ +.+|.+...++.+..+-.....+...+.|+++|| .+||||..+++ .+...+++.++..+.... +.+
T Consensus 25 ~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~ 103 (477)
T TIGR01301 25 SLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGD 103 (477)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccc
Confidence 5555565 5799999999999999999999999999999996 57999998875 666666666665542210 000
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcc
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAI 166 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~ 166 (348)
.-++ . . .......+.+++.+.-++.+...+...++++|..++++. ++ +..+.|+.+.+| .++.
T Consensus 104 ---~~~~--~-~-~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~----~~---~~a~~~~~~~~~lG~ilg~ 169 (477)
T TIGR01301 104 ---NLDK--K-T-KPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDAR----RT---RIANAYFSFFMAIGNVLGY 169 (477)
T ss_pred ---cccc--c-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhH----HH---HHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0 011123556667777788888888889999999986642 23 457777777777 4443
Q ss_pred hhhccc--------------c----cchhhHHHHHHHHHHHHHHHHhcCccc
Q 048319 167 IPISYI--------------K----PWNLRFGVSAICTVIATLLFLSGTCTY 200 (348)
Q Consensus 167 ~~~~yi--------------~----g~~~~F~i~~~~~~i~~~vf~~g~~~y 200 (348)
.+.++. + +++..|.+.++.++++.++-+...|++
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 170 AAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 322221 1 678899999999998888777665554
No 74
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.53 E-value=3.2e-06 Score=83.08 Aligned_cols=157 Identities=9% Similarity=0.014 Sum_probs=115.2
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
++..++|+++ ..+..|+.+ .|.+..+++.....+.....+..+++|+++|| +||++.+.++..+..++..++...
T Consensus 215 ~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~~~~~~~~~-- 290 (393)
T PRK09705 215 GLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLVGFCGFIWL-- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHHHHHHHHHc--
Confidence 4556788888 778888876 79999999999999999999999999999999 699999999988888887655432
Q ss_pred CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh--
Q 048319 85 PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-- 162 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-- 162 (348)
|. ...... ..+.++|.|+.-|+......|+++++ | .+ .+.+++.+...+
T Consensus 291 ~~-------------------~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~---~--~~---g~~~g~~~~~~~~~ 341 (393)
T PRK09705 291 PL-------------------QLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQP---A--IA---GKLVAFMQGIGFII 341 (393)
T ss_pred cc-------------------hHHHHH--HHHHHHhccchHHHHHHHHHhhcCCH---H--HH---HHHHHHHHHHHHHH
Confidence 10 111121 23567788888887777777766422 1 13 557777777777
Q ss_pred -hhcchhhcccc----cchhhHHHHHHHHHHHHHHHHh
Q 048319 163 -VAAIIPISYIK----PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 163 -~~~~~~~~yi~----g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+++.+.+++. +|..+|.+.+++.+++.+..+.
T Consensus 342 ~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 342 AGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 56777777764 5899999888777776665443
No 75
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.52 E-value=6.9e-07 Score=89.50 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=105.4
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
++|++..+.+.+.+.+.....+..+++|+++|| +|||+.+.++.++..++.++...+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 578999999999999999999999999999999 59999999999998888776543211
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc----cchh
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK----PWNL 177 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~----g~~~ 177 (348)
.....+++...+.++|.|..-|......+|-+++++ | .+...+++.+.+ .+++.+.+++. ||+.
T Consensus 129 ~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r---~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~ 199 (465)
T TIGR00894 129 GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------R---SRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPM 199 (465)
T ss_pred cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCe
Confidence 123457777889999999999999999997775432 3 556777777666 56666655552 8999
Q ss_pred hHHHHHHHHHHHHH
Q 048319 178 RFGVSAICTVIATL 191 (348)
Q Consensus 178 ~F~i~~~~~~i~~~ 191 (348)
.|.+.++..++..+
T Consensus 200 ~f~i~~~~~~~~~~ 213 (465)
T TIGR00894 200 IFYVFGIVGCAWSL 213 (465)
T ss_pred ehhhhhHHHHHHHH
Confidence 99988776554443
No 76
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.51 E-value=2.8e-06 Score=86.08 Aligned_cols=150 Identities=13% Similarity=0.005 Sum_probs=92.5
Q ss_pred HHHHHHhhhhhCCchHHH-HHH-----HHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 16 WTMMEYLTEVWKISVVHA-AGI-----VNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A-~~i-----~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
+....++.+.++.+.... +.+ .+......-+.+++.|+++||+ ||||++.++.+++.++.++..++. +...
T Consensus 36 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~--~~~~ 112 (490)
T PRK10642 36 GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIP--SYAT 112 (490)
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhcc--cHHH
Confidence 444456666665333221 111 2333334456788999999995 999999999999999998877652 1000
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcc
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAI 166 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~ 166 (348)
- .-.....+.+...+.++|.|+.-|+..++.+|.++++. | .....+...+.+ .++.
T Consensus 113 ----~--------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------R---g~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 113 ----I--------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------R---GFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred ----H--------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------C---cHHHHHHHHHHHHHHHHHH
Confidence 0 00011246778889999999999999999998876432 2 334444444333 3333
Q ss_pred hhh----ccc------c-cchhhHHHHHHHHHHH
Q 048319 167 IPI----SYI------K-PWNLRFGVSAICTVIA 189 (348)
Q Consensus 167 ~~~----~yi------~-g~~~~F~i~~~~~~i~ 189 (348)
.+. .++ . ||++.|.+.++..+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~ 205 (490)
T PRK10642 172 GVVVLISTIVGEANFLDWGWRIPFFIALPLGIIG 205 (490)
T ss_pred HHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH
Confidence 221 111 2 9999999976544433
No 77
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.50 E-value=3.2e-06 Score=85.88 Aligned_cols=148 Identities=14% Similarity=0.068 Sum_probs=102.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccch
Q 048319 27 KISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGH 106 (348)
Q Consensus 27 ~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~ 106 (348)
+.+..+.+.+...+.....+..++.|+++||+ |||+++.++.+++.++.++..++.. ..+ ..+
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~--~~~--------------~~~ 114 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPG--SSP--------------KSV 114 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccC--ccc--------------chH
Confidence 44556667788888888889999999999995 9999999999999999877665421 000 012
Q ss_pred hHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhc-------------
Q 048319 107 KILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPIS------------- 170 (348)
Q Consensus 107 ~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~------------- 170 (348)
...++++..+.++|.|+.-|....+.+|.++.+. | .+..++++...+ +++..+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------R---g~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~ 185 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------R---GAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAA 185 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 4678889999999999999999999998887543 3 445555555544 33332211
Q ss_pred ------------ccc-cchhhHHHHHHHHHHHHHH--HHhcCccc
Q 048319 171 ------------YIK-PWNLRFGVSAICTVIATLL--FLSGTCTY 200 (348)
Q Consensus 171 ------------yi~-g~~~~F~i~~~~~~i~~~v--f~~g~~~y 200 (348)
..+ +|++.|.+.++..++..+. ++-.+|+|
T Consensus 186 ~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~ 230 (502)
T TIGR00887 186 ADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRY 230 (502)
T ss_pred cccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 113 7999998776655544332 23344444
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.50 E-value=2.9e-06 Score=94.13 Aligned_cols=139 Identities=18% Similarity=0.092 Sum_probs=99.4
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCch--HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISV--VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~--~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
..+...++..++ ..+..++...++.+. ...+.+.+++.....++++++|+++||+ ||||+++++.++.+++.++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~~ 95 (1146)
T PRK08633 17 TQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLIV 95 (1146)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555 556666666566554 3357777888888889999999999995 999999999888777766655
Q ss_pred cccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 81 MSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 81 ~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
+... ..+...++++..+.+++.|..-|...++++|.+++++ + ...++++..+
T Consensus 96 ~~~~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r---~~~~~~~~~~ 147 (1146)
T PRK08633 96 LAYY-------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L---SRANGLLEAF 147 (1146)
T ss_pred HHHH-------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c---hhhhhHHHHH
Confidence 4321 0135678888889999999999999999999887542 3 5567777776
Q ss_pred Hh---hhcchhhcc
Q 048319 161 VP---VAAIIPISY 171 (348)
Q Consensus 161 in---~~~~~~~~y 171 (348)
.+ ++++.+.++
T Consensus 148 ~~ig~~lg~~l~~~ 161 (1146)
T PRK08633 148 TIVAILAGTALFSF 161 (1146)
T ss_pred HHHHHHHHHHHHHH
Confidence 66 455444443
No 79
>PRK09952 shikimate transporter; Provisional
Probab=98.50 E-value=3.4e-06 Score=84.29 Aligned_cols=164 Identities=10% Similarity=0.047 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..++.-+++|++ ..+..|+++.+|++......+.........+..+++|+++|| +||+|++.++.++..++...+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~ 336 (438)
T PRK09952 258 LRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGTLSAFPFFMA 336 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888 878889988899998766555555555566677789999999 599999998877665554333321
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
... ......+.+.+.+.+++.|...+...++.+|.++.+. | .+...+-|...+
T Consensus 337 ~~~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r---~tg~g~~~~~~~ 389 (438)
T PRK09952 337 LEA------------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------R---YSGAGVGYQVAS 389 (438)
T ss_pred HHc------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------h---HHHHhHHHHHHH
Confidence 100 0112333445556678888878888899998887532 3 345555443333
Q ss_pred ----hhcchhhccc-c----cchhhHHHHHHHHHHHHHHHHh
Q 048319 163 ----VAAIIPISYI-K----PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 163 ----~~~~~~~~yi-~----g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+++.++.++ + +|...|.+.+++.+++.+..+.
T Consensus 390 ~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 390 VVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4555555554 2 4777787777766666555443
No 80
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.48 E-value=3.2e-06 Score=81.25 Aligned_cols=146 Identities=12% Similarity=0.038 Sum_probs=100.2
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+++.+|.++.+++.+.....+......+++|+++|| +||++.+.++.++..+++.++....
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~------------ 286 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVAFYTGLAADN------------ 286 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHHHHHHHHHHH------------
Confidence 456678888899999999888777666666677899999999 5999999888776665554433220
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...++....+.+++.|..-|...+...|..++ + + .+.+..++...| .+++.+.+++
T Consensus 287 ----------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~----~---~---~~~~~~~~~~~~~g~~~g~~~~g~~ 346 (375)
T TIGR00899 287 ----------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG----R---A---GAATTLYTNTGRVGWIIAGSVGGIL 346 (375)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc----h---h---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123344455566777776666666666655432 1 2 456666666666 6666666655
Q ss_pred -c--cchhhHHHHHHHHHHHHHHHH
Q 048319 173 -K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 173 -~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ ||+..|.+.++..+++.++..
T Consensus 347 ~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 347 AERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHh
Confidence 3 899999998888877776543
No 81
>PRK15075 citrate-proton symporter; Provisional
Probab=98.47 E-value=3.4e-06 Score=83.91 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhCCchHHHHHH-HHHHH-HHHH----HHhhhHHHHHhhhccchHHHHHHHHHHhhhh
Q 048319 3 ALLWADCLAQFVMWTMMEYLTEVWKISVVHAAGI-VNIFS-GLVL----VLQLPMQYLVDTIISKYWMLVFSSLAYSVGI 76 (348)
Q Consensus 3 ~~e~~Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i-~~~~~-~~~~----~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~ 76 (348)
+++..+|..+ ..+...+.++++.++.+-+.. .+... +..+ +..++.|+++|| +||||.+..+.+++.++.
T Consensus 25 ~~~~~d~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~~~ 100 (434)
T PRK15075 25 FLEMFDFFLF---GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLIVTLSIMASGT 100 (434)
T ss_pred HHHHHHHHHH---HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHHHHHHHHHHHH
Confidence 3455555432 344456667888877664433 33322 2233 356788999999 599999999999999998
Q ss_pred hhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHH
Q 048319 77 GLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKL 156 (348)
Q Consensus 77 ~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~ 156 (348)
++..++.. ..- - .......++++..+.++|.|+.-|+...+.+|.+++++ | .+...+
T Consensus 101 ~l~~~~~~--~~~----~--------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r---g~~~~~ 157 (434)
T PRK15075 101 LLIAFVPG--YAT----I--------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K---GFYTSW 157 (434)
T ss_pred HHHHhCCc--HHH----H--------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c---hHHHHH
Confidence 88876521 000 0 00001245677889999999999999999998886432 2 334444
Q ss_pred HHHHHh---h----hcchhhcc-----cc--cchhhHHHHHH
Q 048319 157 LLFMVP---V----AAIIPISY-----IK--PWNLRFGVSAI 184 (348)
Q Consensus 157 ~y~~in---~----~~~~~~~y-----i~--g~~~~F~i~~~ 184 (348)
+....| . ++..+... ++ ||++.|.+..+
T Consensus 158 ~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 158 QSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 443333 2 22222111 12 99999997544
No 82
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.45 E-value=5.4e-06 Score=84.01 Aligned_cols=146 Identities=14% Similarity=0.030 Sum_probs=92.1
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
+-.+.||++ ..+..|+.+.+|++...+............+..+++|+++|| +||++++.++.++..++...+.....
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~- 338 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALFVLAIPAFILIN- 338 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 345678888 888889988899998888777777666777888899999999 59999998887654443332221100
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
......++++..+.+++.|+.-+...+...+.++.+. | .+...+.|-..+
T Consensus 339 ------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------R---g~~~g~~~~~~~~~g 391 (490)
T PRK10642 339 ------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------R---YSALAAAFNISVLVA 391 (490)
T ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------c---hHHHHHHHHHHHHHH
Confidence 0123455666666666665555556667777665432 3 445555444444
Q ss_pred hhcchhhcccc----cchhhHHH
Q 048319 163 VAAIIPISYIK----PWNLRFGV 181 (348)
Q Consensus 163 ~~~~~~~~yi~----g~~~~F~i 181 (348)
.+++.+++++. +|+..+.+
T Consensus 392 ~~~p~i~g~l~~~~~~~~~~~~~ 414 (490)
T PRK10642 392 GLTPTLAAWLVESTQNLMMPAYY 414 (490)
T ss_pred HHHHHHHHHHHHHhCCchHHHHH
Confidence 44555555542 45544443
No 83
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.45 E-value=7.9e-07 Score=89.43 Aligned_cols=144 Identities=15% Similarity=-0.051 Sum_probs=102.5
Q ss_pred HHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 19 MEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 19 ~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
...+.+++|.+..+.+.+.+.+....-+..+++|+++||+ ||||.+.++.++..++.+++......
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------- 117 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------- 117 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 3445568999999999999999888889999999999995 99999999888887776665542100
Q ss_pred CcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc---
Q 048319 99 PECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI--- 172 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi--- 172 (348)
...+...+++...+.++|.|..-|......+|-+++++ | .....++-.+.+ .+++.+..++
T Consensus 118 ----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r---g~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 118 ----GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------R---GRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred ----ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------e---eeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 01235677778888999999999999999998887543 2 334555544444 3443333322
Q ss_pred --c-cchhhHHHHHHHHHHH
Q 048319 173 --K-PWNLRFGVSAICTVIA 189 (348)
Q Consensus 173 --~-g~~~~F~i~~~~~~i~ 189 (348)
. +|+..|.++++..++.
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~ 204 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALII 204 (467)
T ss_pred hccCcchhHHHHHHHHHHHH
Confidence 2 5888888876655543
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.44 E-value=8.1e-06 Score=80.27 Aligned_cols=147 Identities=11% Similarity=0.103 Sum_probs=97.7
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh----ccchH-HHHHHHHHHhhhhhhhhcccCCccCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI----ISKYW-MLVFSSLAYSVGIGLLTMSTPPVLAGF 90 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~----lGr~~-ti~~~~~i~~~G~~ll~~s~~p~~~~~ 90 (348)
..+..|+++ .|++.++-+.+..... -+++..+.|.++||+ +|||| .+.++.++..+++.++.... +
T Consensus 20 ~~~~~~l~~-~g~~~~~ig~~~~~~~--~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~-~----- 90 (402)
T PRK11902 20 GTLQAWMTV-EGLDIQTIGFFSLVGQ--AYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP-P----- 90 (402)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHH--HHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC-c-----
Confidence 567788886 5999999988855444 379999999999996 38887 57777777777777665531 0
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcch
Q 048319 91 VGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAII 167 (348)
Q Consensus 91 ~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~ 167 (348)
..+...+++...+.++..+...|...++..|.+++++ | .++..+..++.+ .+++.
T Consensus 91 -------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r---~~~~~~~~~g~~~g~i~g~~ 148 (402)
T PRK11902 91 -------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------R---GAGAAVKVLGYRLAMLVSGG 148 (402)
T ss_pred -------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------h---hHHHHHHHHHHHHHHHHHhH
Confidence 1234445555556678888899999999998865432 2 333333333333 44443
Q ss_pred hhccc-c---cchhhHHHHHHHHHHHHHHH
Q 048319 168 PISYI-K---PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 168 ~~~yi-~---g~~~~F~i~~~~~~i~~~vf 193 (348)
+..++ + ||+..|.+.++..++..+..
T Consensus 149 l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~ 178 (402)
T PRK11902 149 LALWLADRVLGWGNTYLLMAGLMLAGALTT 178 (402)
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 33332 2 89999999887766655443
No 85
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.41 E-value=6.8e-07 Score=93.77 Aligned_cols=171 Identities=13% Similarity=0.125 Sum_probs=119.2
Q ss_pred HhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC--CccCC
Q 048319 13 FVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP--PVLAG 89 (348)
Q Consensus 13 yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~--p~~~~ 89 (348)
.|. ...+.-+.+.++++..+.+.+.+.+.....+..++.|+++|| .||+|.+.++.+++.+|.++.++... ....+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHHHHHHHHHHhChHHhcCCccc
Confidence 344 444555667899999999999999999999999999999999 59999999999999999999887542 00000
Q ss_pred -------------CCCCCCCC----------CCcccc----cchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh
Q 048319 90 -------------FVGTCSEY----------KPECIV----KGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE 142 (348)
Q Consensus 90 -------------~~~~c~~~----------~~~c~~----~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~ 142 (348)
...-|... +..|.+ ......++++..+.++|.|..-+...+++.|-+++++
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~-- 205 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKN-- 205 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccc--
Confidence 00123110 012331 1135567789999999999999999999998776542
Q ss_pred hhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-------------------------cchhhHHHHHHHHHHHHHHH
Q 048319 143 HISLSLIQREFFKLLLFMVP---VAAIIPISYIK-------------------------PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 143 e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~-------------------------g~~~~F~i~~~~~~i~~~vf 193 (348)
+ ..++.+++.+.+ .+|+++.+++. +||++|.+.++..++..+.+
T Consensus 206 ----~---~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 206 ----S---PLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred ----c---HHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 556777777766 44443332211 38899998877666554433
No 86
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.41 E-value=4.7e-06 Score=81.53 Aligned_cols=107 Identities=20% Similarity=0.200 Sum_probs=93.6
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..|+..+.+.++++..+|+.+-.+|-+.-.+.+++.|++.+| +|++++|++|..++.+|..++.=++
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~lgL~l~avg~~lF~pAa------------ 99 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVLGLLLYAVGAALFWPAA------------ 99 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHHHHHHHHHHHHHHhhhh------------
Confidence 457777888999999999999999999999999999999999 5999999999999999999886432
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE 142 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~ 142 (348)
+......|..+|++++.|.|..+...+|++.+.-+++...
T Consensus 100 -------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~ 139 (422)
T COG0738 100 -------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAA 139 (422)
T ss_pred -------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHH
Confidence 1234678889999999999999999999999988876443
No 87
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.40 E-value=6.5e-06 Score=80.32 Aligned_cols=149 Identities=11% Similarity=-0.011 Sum_probs=97.1
Q ss_pred HHHHHHhhhhhCCchHH---HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 16 WTMMEYLTEVWKISVVH---AAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~---A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
..+..|+.+..+..... ++.+...+.....+..++.|+++|| +||++++..+..+..++.+++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~--------- 309 (408)
T PRK09874 240 PILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVLLLIPMSFVQ--------- 309 (408)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHHHHHHHHHhc---------
Confidence 44556666543322211 2233334444455666778999999 5999999999888877776554321
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI 169 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~ 169 (348)
+...+++...+.+++.|...|...+...+..+++ .+ .+.+.+++...+ .+++.+.
T Consensus 310 -------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~---g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 310 -------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQ------IA---GRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred -------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcc------cc---eeeehHHHHHHHHHHHhhHHHH
Confidence 1345566777888899988888877776544322 13 556666666555 6677766
Q ss_pred cccc---cchhhHHHHHHHHHHHHHHHHhc
Q 048319 170 SYIK---PWNLRFGVSAICTVIATLLFLSG 196 (348)
Q Consensus 170 ~yi~---g~~~~F~i~~~~~~i~~~vf~~g 196 (348)
+++. ||+..|.+.++..+++.+.....
T Consensus 368 G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 368 AAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 6653 99999999988888777655443
No 88
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.37 E-value=1e-05 Score=81.43 Aligned_cols=70 Identities=16% Similarity=-0.029 Sum_probs=55.3
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhh
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGI 76 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~ 76 (348)
++--..++++ .-+..|+++.+|++..+++.....+.....+..+++|+++||+ ||++.++.+..+..++.
T Consensus 268 ~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 268 IFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHH
Confidence 3444455667 6677899999999999999998888888999999999999995 99888776655444443
No 89
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.37 E-value=3.6e-06 Score=68.36 Aligned_cols=122 Identities=13% Similarity=0.113 Sum_probs=88.2
Q ss_pred HHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHh
Q 048319 41 SGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFA 120 (348)
Q Consensus 41 ~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG 120 (348)
.....+..++.|+++|| +|||+++..+..+..++.+++.... +...+++...+.+++
T Consensus 8 ~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~g~~ 64 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVLSTAMFALSS----------------------NITVLIIARFLQGFG 64 (141)
T ss_pred hhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHHHHHHHHHhc----------------------cHHHHHHHHHHHHHH
Confidence 34556677889999999 5999999999999888877765431 235566677888899
Q ss_pred cccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 121 SSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 121 ~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.|..-+...+...|.+++++ + .+..++++...+ .+++.+.+++- ||+..|.+..+..+++.+...
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 65 AAFALVAGAALIADIYPPEE------R---GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHHHHHhHHHHHHHHCChhh------h---hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 99888999898888887543 3 455666665555 55555555543 899999887777666655444
No 90
>PTZ00207 hypothetical protein; Provisional
Probab=98.36 E-value=5.6e-06 Score=85.87 Aligned_cols=144 Identities=10% Similarity=0.143 Sum_probs=100.1
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
......+.+.+|+++.+.+.+.+...... ...+++|+++|+ +|||+++.++.++..+|++++.++......
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr-~G~R~vllig~ll~~iG~ll~ala~~~~i~------- 117 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDY-LGPRPIFVLSMTVFCLGTLLFALTFQEVIE------- 117 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHHhccccc-------
Confidence 33455677889999999998887754444 355678999999 599999999999999999998885321111
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hhcchhhcc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VAAIIPISY 171 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~~~~~~~y 171 (348)
.+...+++...+.++|.|.+-+.......+.|+++ | .....+.....+ .++++...+
T Consensus 118 ---------~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-------R---G~a~Gi~~~~~gLGsaI~~~l~~~l 178 (591)
T PTZ00207 118 ---------GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-------R---GAVVAIMKTFTGLGSAILGSIQLAF 178 (591)
T ss_pred ---------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-------h---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13567788888999999888777777888877522 2 345555555555 344444445
Q ss_pred cc-cchhhHHHHHHHHH
Q 048319 172 IK-PWNLRFGVSAICTV 187 (348)
Q Consensus 172 i~-g~~~~F~i~~~~~~ 187 (348)
+. +|+..|.+.++..+
T Consensus 179 ~~~~~~~~fl~l~vl~~ 195 (591)
T PTZ00207 179 FSDNTSAYFFFLMSFAL 195 (591)
T ss_pred HHHhHHHHHHHHHHHHH
Confidence 55 77766665444333
No 91
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.36 E-value=1.2e-05 Score=78.81 Aligned_cols=147 Identities=10% Similarity=0.061 Sum_probs=92.4
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+++.+|++..+++.+.....+...+..+++|+++|| +||+|.+..+.....+....+....
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------------ 303 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVAGVCFYAGMLMAH------------ 303 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 456678888899999999888877777777788999999999 5999988877665555433322210
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
....+.+...+.+++.|..-+...+...|.+++ + + .+...++....| .+++.+.+++
T Consensus 304 ----------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~----~---~---g~~~~~~~~~~~lg~~~g~~l~G~i 363 (393)
T PRK15011 304 ----------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG----Q---A---GSATTLYTNTSRVGWIIAGSLAGIV 363 (393)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----C---c---chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112233333444444444334444444554432 2 2 334444444444 5666666665
Q ss_pred c---cchhhHHHHHHHHHHHHHHHHh
Q 048319 173 K---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
. ||+..|.+..+..++++++.+.
T Consensus 364 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 364 AEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 4 8999999888877777665543
No 92
>PRK09952 shikimate transporter; Provisional
Probab=98.36 E-value=1.6e-05 Score=79.43 Aligned_cols=119 Identities=12% Similarity=0.092 Sum_probs=76.9
Q ss_pred HHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCC
Q 048319 46 VLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCS 125 (348)
Q Consensus 46 ~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k 125 (348)
+..++.|+++||+ |||+++.++.+++.++.++..++.. ... . .......+++...+.++|.|+.-
T Consensus 79 ~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~--~~~----~--------~~~~~~~l~~~R~l~G~~~g~~~ 143 (438)
T PRK09952 79 LGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPS--FST----I--------GWWAPVLLVTLRAIQGFAVGGEW 143 (438)
T ss_pred hHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCc--HHH----H--------HHHHHHHHHHHHHHHHhhhcccH
Confidence 4456779999995 9999999999999999888776521 000 0 00001246667788999999999
Q ss_pred cchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcc----------cc-cchhhHHHHHHHHHH
Q 048319 126 VESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISY----------IK-PWNLRFGVSAICTVI 188 (348)
Q Consensus 126 ~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~y----------i~-g~~~~F~i~~~~~~i 188 (348)
|....+..|.++++. | ....+....+.+ +++..+..+ .. ||+..|.+.++..++
T Consensus 144 ~~~~~~~~e~~p~~~------r---g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 144 GGAALLAVESAPKNK------K---AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHHhCCCCC------C---cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 999999998766432 2 223333333333 333222111 12 999999988776544
No 93
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.1e-05 Score=79.59 Aligned_cols=145 Identities=13% Similarity=0.091 Sum_probs=119.9
Q ss_pred hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcc
Q 048319 22 LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPEC 101 (348)
Q Consensus 22 l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c 101 (348)
+-+++|.+...|+..++.|....-+..++-..+.|| +-||+.++....+..+|.++-+++ |
T Consensus 39 iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lLl~~l~lFi~~n~l~alA------p------------ 99 (394)
T COG2814 39 IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLLLGLLALFIVSNLLSALA------P------------ 99 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHh------c------------
Confidence 345799999999999999999999999999999999 699999999999999999998876 1
Q ss_pred cccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cc
Q 048319 102 IVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PW 175 (348)
Q Consensus 102 ~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~ 175 (348)
+...+.++-.+.++..|.+-+...+..++..++++ | .+.-..-+.... .+|.-+-.++. ||
T Consensus 100 ----~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~---~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 100 ----SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------R---GRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------h---hhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 46889999999999999999999999999888654 3 455555555544 44444445665 99
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCc
Q 048319 176 NLRFGVSAICTVIATLLFLSGTC 198 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf~~g~~ 198 (348)
|..|.+-++.-+++.+..+..-|
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999888777777777776666
No 94
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.34 E-value=1.5e-05 Score=76.05 Aligned_cols=163 Identities=15% Similarity=0.025 Sum_probs=103.3
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchH-HHHHHHHHHhhhhhhhhcc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYW-MLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~-ti~~~~~i~~~G~~ll~~s 82 (348)
.++..++++++ ..+..|+.+.+|++..+++.+.........+..+++|+++||+ ||++ .+........++.+++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHHHH
Confidence 44555667777 7788888888999999999999888888899999999999994 8875 2222222222221111111
Q ss_pred cC-CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 83 TP-PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 83 ~~-p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
.. ... .........+.+++.+..+.-|...++.+|.+++++ + .+.+.++....
T Consensus 303 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---g~~~~~~~~~~ 356 (399)
T TIGR00893 303 MFATNY-----------------VNIPYAALALVALGFFGLGAGAIGWALISDNAPGNI------A---GLTGGLINSLG 356 (399)
T ss_pred HHHhcc-----------------chhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhH------H---HHHHHHHHHHH
Confidence 00 000 011222333334444444477888888888776432 3 55666666666
Q ss_pred h---hhcchhhcccc---c-chhhHHHHHHHHHHHHHHHH
Q 048319 162 P---VAAIIPISYIK---P-WNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 162 n---~~~~~~~~yi~---g-~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ .+++.+.+++. | |...|.+.++..+++.++.+
T Consensus 357 ~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 357 NLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 6 66777777664 6 99999988877777665543
No 95
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.34 E-value=7.1e-06 Score=82.55 Aligned_cols=141 Identities=11% Similarity=-0.100 Sum_probs=93.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+++.+|++..+++.+...+.....+..+++|+++|| +||++.+.++.++..++.+++.....
T Consensus 296 ~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~----------- 363 (496)
T PRK03893 296 ALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQLLIIPVFAIGG----------- 363 (496)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHhhccc-----------
Confidence 556778878899999999999999999999999999999999 59999998887776665544332210
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
.........+++.+....+.-+...+...|.++++. + .+.+.+++...+ .+++.+.+++
T Consensus 364 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 364 ---------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------R---AAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred ---------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------h---hcccchhhhhhhHHHHHHHHHHHHH
Confidence 112222222333222223344566667776665321 3 566777777666 5677666666
Q ss_pred c---cchhhHHHHHHHH
Q 048319 173 K---PWNLRFGVSAICT 186 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~ 186 (348)
. ||+..|.+.++.+
T Consensus 426 ~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 426 AQRLDLGTALASLSFSL 442 (496)
T ss_pred hccCChHHHHHHHHHHH
Confidence 5 7777765544333
No 96
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.33 E-value=4.9e-06 Score=79.83 Aligned_cols=153 Identities=16% Similarity=0.057 Sum_probs=101.1
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhh-hhhhc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGI-GLLTM 81 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~-~ll~~ 81 (348)
..++..+.++++ ..+..|+++.+|.+..+++.+.........+..+++|+++|| +||++.+..+..+..+.. .++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHHHHHHH
Confidence 445667778888 778888888899999999998888888888999999999999 599998876655444322 22211
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
... ......++..+.+.+++.|...+...++..|.++++. | .+.+...|...
T Consensus 306 ~~~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~---~~~~~~~~~~~ 357 (394)
T TIGR00883 306 LLD-------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------R---YTGASLAYNLA 357 (394)
T ss_pred Hhc-------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------e---eeEeeehhHhH
Confidence 100 0123445566677788888888999999998877543 2 23344333333
Q ss_pred h----hhcchhhcccc---c-chhhHHHHHHH
Q 048319 162 P----VAAIIPISYIK---P-WNLRFGVSAIC 185 (348)
Q Consensus 162 n----~~~~~~~~yi~---g-~~~~F~i~~~~ 185 (348)
+ .+++.+.+++- | |+..+...++.
T Consensus 358 ~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 358 GAIFGGFAPYIAAALVAMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHHHhhHHHHHHHHHHHHcCcchhHHHHHHHH
Confidence 3 35555555443 5 66655544443
No 97
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.33 E-value=7.9e-06 Score=80.58 Aligned_cols=151 Identities=15% Similarity=0.118 Sum_probs=106.7
Q ss_pred HhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCC
Q 048319 13 FVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 13 yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
.++ ..+..|+.+.+|++...++.+...+.....+..+++++++|+ .++++++..+..+..++.+++... |
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~--~------ 310 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFLAVGLFGLM--P------ 310 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHHHHHHHHcc--c------
Confidence 455 556677877799999999999888888888899999999998 477788888888888887766543 1
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchh
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIP 168 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~ 168 (348)
+.....+++.+.++|.+...+...++..|+.+++. + .+.+.+++...+ .+++.+
T Consensus 311 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~---g~~~g~~~~~~~~g~~~g~~l 367 (417)
T PRK10489 311 --------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------L---GRINGLWTAQNVTGDAIGAAL 367 (417)
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------H---HHHHHHHHHHHhhhHhHHHHH
Confidence 23445566677778877766666677776665432 3 556777766555 667766
Q ss_pred hcccc---cchhhHHHHHHHHHHHHHHHHh
Q 048319 169 ISYIK---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 169 ~~yi~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+++- |+...|.+.+++.++..++...
T Consensus 368 ~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 368 LGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 66654 7777887666555554444433
No 98
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.32 E-value=1.3e-05 Score=80.62 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=105.5
Q ss_pred HHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccchHHHHHHHHHHh--hhhhhhhccc
Q 048319 8 DCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI-ISKYWMLVFSSLAYS--VGIGLLTMST 83 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~-lGr~~ti~~~~~i~~--~G~~ll~~s~ 83 (348)
.-+++++. ..+..|+++ +|++..+++.+.........+..+++|+++|+. .++++...++..+.. ++++++...
T Consensus 253 ~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~- 330 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA- 330 (455)
T ss_pred HHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 33455555 666777764 799999999999988888888888999999984 344444444333333 333332221
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
.+...+++...+.+++.|..-++..+...|.+++++ + .+.+..+....+
T Consensus 331 ---------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~l 380 (455)
T TIGR00892 331 ---------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------F---SSAVGLVTIVECC 380 (455)
T ss_pred ---------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------H---hhHHhHHHHHHHH
Confidence 123456667778889999999999999998776432 2 445556555555
Q ss_pred --hhcchhhcccc----cchhhHHHHHHHHHHHHHHHHh
Q 048319 163 --VAAIIPISYIK----PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 163 --~~~~~~~~yi~----g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+++.+.+++- +|+..|.+.++.++++.+....
T Consensus 381 g~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~ 419 (455)
T TIGR00892 381 AVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAI 419 (455)
T ss_pred HHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHH
Confidence 77777777653 6999999988887777664443
No 99
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.32 E-value=1.7e-05 Score=88.37 Aligned_cols=127 Identities=11% Similarity=-0.024 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH--HHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHH
Q 048319 33 AAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVF--SSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILF 110 (348)
Q Consensus 33 A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~--~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~ 110 (348)
.+....++.....++.+++|+++||+ ||+|++.. ...+...+..++.... .+.+.+
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~---------------------~s~~~l 111 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL---------------------NSVPLL 111 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH---------------------hhHHHH
Confidence 44555566666778889999999995 99997643 2222222222222110 135778
Q ss_pred HHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cchhhHHHHHH
Q 048319 111 YAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PWNLRFGVSAI 184 (348)
Q Consensus 111 ~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~~~~F~i~~~ 184 (348)
+++.++.++|.+.+.|...+++.|.+++++ + ....++..++.+ ++++.+.+++- ||++.|.+.++
T Consensus 112 ~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~---~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~ 182 (1140)
T PRK06814 112 FAALFLMGIHSALFGPIKYSILPDHLNKDE------L---LGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMG 182 (1140)
T ss_pred HHHHHHHHHHHHhhchHHHHhhHhhcCccc------c---chhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 899999999999999999999999998643 3 567888888887 67777777653 89998844444
Q ss_pred HHHHHH
Q 048319 185 CTVIAT 190 (348)
Q Consensus 185 ~~~i~~ 190 (348)
..++++
T Consensus 183 ~~~~~~ 188 (1140)
T PRK06814 183 IAVLGW 188 (1140)
T ss_pred HHHHHH
Confidence 434333
No 100
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.32 E-value=1.6e-05 Score=77.57 Aligned_cols=143 Identities=19% Similarity=0.121 Sum_probs=98.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+.+ .|.+...++...........+..++.|+++|| +||++.+..+..+..++..++. . .
T Consensus 221 ~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~~~~~~~-~-~----------- 285 (381)
T PRK03633 221 GLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVILGSIAML-S-Q----------- 285 (381)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHHHHHHHh-h-h-----------
Confidence 445566664 69999999888888888888899999999999 5999999999888888766543 1 0
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
...+..+.+.+++.+..-|...+...|+.++++ + .+....+..+.+ .+++.+.+++
T Consensus 286 ------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~---~~~~~~~~~~~~lG~~igp~~~G~l 344 (381)
T PRK03633 286 ------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------L---VAMNQALLLSYTVGSLLGPSFTAML 344 (381)
T ss_pred ------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122345556666666677888887776664432 1 223333333333 6777777765
Q ss_pred -c--cchhhHHHHHHHHHHHHHHHH
Q 048319 173 -K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 173 -~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+ ||.+.|.+.+.+.+++.+..+
T Consensus 345 ~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 345 MQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHH
Confidence 3 899999987777766554433
No 101
>PRK12382 putative transporter; Provisional
Probab=98.31 E-value=1.1e-05 Score=78.77 Aligned_cols=151 Identities=13% Similarity=0.081 Sum_probs=103.9
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
+++.++ ..+..|+.+ .|++. +......+.....+..++.|++.|| +||+|.+..+..+..++.+++....
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~----- 300 (392)
T PRK12382 230 VGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETVGLLLLWLAP----- 300 (392)
T ss_pred HHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHHHcc-----
Confidence 344444 444566654 45543 4444555555667778899999999 6999999999999888887765431
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
+....+++..+.++|.|..-|...+...|.++++. + .+.+.+++...+ .++
T Consensus 301 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 301 -----------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------R---GTALGGYAAFQDIAYGVS 354 (392)
T ss_pred -----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------H---HHHHHHHHHHHHHHHHHH
Confidence 12445566777888888877777777776654321 3 567777777666 666
Q ss_pred chhhcccc---cchhhHHHHHHHHHHHHHHHHh
Q 048319 166 IIPISYIK---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 166 ~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
+.+.+++- ||+..|.+.++..+++.++.+.
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 355 GPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 66666653 9999999998888887776654
No 102
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.29 E-value=1.3e-05 Score=78.80 Aligned_cols=153 Identities=11% Similarity=0.075 Sum_probs=96.1
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
.++.+.+|++..+++.....+.....+..+++|+++|| +||++.+.++.++..++.+++.+...+...+ . +
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~--- 378 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAICLFVLGILGASFVTG--S---S--- 378 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhcccCC--c---c---
Confidence 34445689999888888888888889999999999999 5999999999888888877776322211000 0 0
Q ss_pred cccccchhHHH-HHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc--
Q 048319 100 ECIVKGHKILF-YAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK-- 173 (348)
Q Consensus 100 ~c~~~~~~~~~-~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~-- 173 (348)
.......+ ...++....|. +.-|+...+.+|.++++. + .......+...| .+++.+.+++.
T Consensus 379 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~------~---~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 379 ---KSSGNVAIVFILLFIAFFAM-GWGPVPWVIVSEIFPLSL------R---PKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred ---cchhHHHHHHHHHHHHHHHc-cccCeehhhhhccCChHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00011222 22222233333 344777777788776432 2 445555555555 55565556553
Q ss_pred -cchhhHHHHHHHHHHHHHHHH
Q 048319 174 -PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 174 -g~~~~F~i~~~~~~i~~~vf~ 194 (348)
||...|.+.+++.+++.++.+
T Consensus 446 ~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 446 IGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred cCccceehhHHHHHHHHHHHHh
Confidence 899999887777666655443
No 103
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.29 E-value=2.5e-05 Score=76.46 Aligned_cols=148 Identities=10% Similarity=-0.054 Sum_probs=98.5
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
.++.+ ..+..|+.+ .|++..+++.+...+.....+..+++|+++|| +||++++.++.....++.+++....
T Consensus 235 ~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------ 306 (406)
T PRK11551 235 VLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILASLAALAAAP------ 306 (406)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhcC------
Confidence 34444 444556654 79999999999999988899999999999999 5999999887777666665554321
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcc
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAI 166 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~ 166 (348)
+...+++...+.+++.++..+...++..|.+++++ + .+...+++...+ .+++
T Consensus 307 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~---g~~~g~~~~~~~~g~~~g~ 361 (406)
T PRK11551 307 ----------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------R---GTGVGAAVAVGRLGSMAGP 361 (406)
T ss_pred ----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------h---hhhhhHHHHhhhHHHHHHh
Confidence 12334445556677777777778888887775432 3 445555555544 6666
Q ss_pred hhhcccc----cchhhHHHHHHHHHHHHH
Q 048319 167 IPISYIK----PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 167 ~~~~yi~----g~~~~F~i~~~~~~i~~~ 191 (348)
.+.+++- +|...|.+.....+++.+
T Consensus 362 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK11551 362 LLAGQLLALGRSTVGVIGASIPVILVAAL 390 (406)
T ss_pred hhHhhhhccCCchHHHHHHHHHHHHHHHH
Confidence 6666653 555566655555544443
No 104
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.29 E-value=3.7e-05 Score=78.18 Aligned_cols=158 Identities=14% Similarity=0.102 Sum_probs=102.5
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh----ccchHH-HHHHHHHHhhhhhh
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI----ISKYWM-LVFSSLAYSVGIGL 78 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~----lGr~~t-i~~~~~i~~~G~~l 78 (348)
-+..-+.++-. ..+..|+++ .|.+.++.+.. ...+..|...++.|.++||+ +||||. ++++.+...++...
T Consensus 21 ~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~--~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~ 97 (491)
T PRK11010 21 GFASGLPLALTSGTLQAWMTV-ENIDLKTIGFF--SLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAA 97 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHH--HHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHH
Confidence 33444455545 556666654 58887777765 33455678999999999995 399996 55676666666666
Q ss_pred hhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHH
Q 048319 79 LTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLL 158 (348)
Q Consensus 79 l~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y 158 (348)
+.... | ..+...+++...+.+++.+...+...++..|.+++++ | .+...+.-
T Consensus 98 ~a~~~-~------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------r---g~~~~i~~ 149 (491)
T PRK11010 98 MGFLE-P------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------R---GAGAAISV 149 (491)
T ss_pred HHHcC-C------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------h---HHHHHHHH
Confidence 54431 1 1235566667778888899999999999999887432 2 33334433
Q ss_pred HHHh---hhcchhhccc-c---cchhhHHHHHHHHHHHHHHH
Q 048319 159 FMVP---VAAIIPISYI-K---PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 159 ~~in---~~~~~~~~yi-~---g~~~~F~i~~~~~~i~~~vf 193 (348)
.+.+ ++++.+..++ + ||+..|.+.++.+++..+..
T Consensus 150 ~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~ 191 (491)
T PRK11010 150 LGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIAT 191 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 3333 4444444433 2 89999999887766665443
No 105
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.28 E-value=2.1e-05 Score=78.80 Aligned_cols=157 Identities=15% Similarity=0.072 Sum_probs=91.6
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-cchHHH-HHHHHHHhhhhhhhhcc
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTII-SKYWML-VFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~l-Gr~~ti-~~~~~i~~~G~~ll~~s 82 (348)
++--+.+|++ ..+..|+++..|++..+++.....+.....+..+++|+++||+- ||++.. .....+..++.+++.+.
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~ 342 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN 342 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3444566777 77788888889999999888888877777788999999999963 555432 33334444444433321
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
+. .+.....+.+.+++.+..+.-+....+..|.++++ . + .+.+.++....|
T Consensus 343 --~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~----~--~---g~~~g~~~~~~~ 393 (452)
T PRK11273 343 --PA------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK----A--A---GTAAGFTGLFGY 393 (452)
T ss_pred --cc------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh----h--h---hhHHHHHHHHHH
Confidence 10 01222333343443332221112223444444322 1 3 556666666555
Q ss_pred ----hhcchhhcccc---cchhhHHHHHHHHHHHHH
Q 048319 163 ----VAAIIPISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 163 ----~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.+++.+.+++. ||+.+|.+..+..+++.+
T Consensus 394 ~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~ 429 (452)
T PRK11273 394 LGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 429 (452)
T ss_pred HHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 33566666664 999999887776666544
No 106
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.24 E-value=2.8e-05 Score=77.31 Aligned_cols=150 Identities=14% Similarity=0.193 Sum_probs=102.4
Q ss_pred HHHHHHhhhhhCCch--------HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 16 WTMMEYLTEVWKISV--------VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~--------~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
..+..|+++ .|.++ ...+...........+.-++.|+++|| +||++++.++.++..++..++.....
T Consensus 229 ~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~~~~~v~~~l~~~~~~--- 303 (418)
T TIGR00889 229 IFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSLVAWALRFGFFAYGDP--- 303 (418)
T ss_pred HhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcCc---
Confidence 334456543 45443 455667777776777778899999999 59999999999999998777765311
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH-Hh---h
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM-VP---V 163 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~-in---~ 163 (348)
+......+++...+.+++.|...+....+++|.+++++ + .+.+.+++.. .+ .
T Consensus 304 ---------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~---g~~~g~~~~~~~~lg~~ 359 (418)
T TIGR00889 304 ---------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------R---ASAQGLFTLMCNGFGSL 359 (418)
T ss_pred ---------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------H---HHHHHHHHHHHHhhHHH
Confidence 00123456667778888888888888888998887543 3 5566666532 22 5
Q ss_pred hcchhhcccc---------cchhhHHHHHHHHHHHHHHHH
Q 048319 164 AAIIPISYIK---------PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 164 ~~~~~~~yi~---------g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+++.+.+++- ||+..|.+.++..+++.++++
T Consensus 360 iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 360 LGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 6666666542 488999887777666555444
No 107
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.24 E-value=1.6e-05 Score=76.96 Aligned_cols=136 Identities=13% Similarity=-0.052 Sum_probs=93.8
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+.+.+|++..+++.+...+.....+..+++|+++|| +||++.+.++..+..+....+....
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~------------ 325 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLLIIPVFAIG------------ 325 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHHHHHHHHhC------------
Confidence 445667777899999999999999888999999999999999 5999999988776533322222110
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
.+...+.+++.+.++..++.-+...++..|.++++. + .+.+...+...+ .+++.+.+++
T Consensus 326 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~g~~~~~~~~g~~~g~~~~g~l 387 (405)
T TIGR00891 326 ---------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------R---AAGLGFTYQLGNLGGALAPIIGALL 387 (405)
T ss_pred ---------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------h---HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 012344555556666666666777788887765432 3 556777777666 6667666666
Q ss_pred c---c-chhhHHHH
Q 048319 173 K---P-WNLRFGVS 182 (348)
Q Consensus 173 ~---g-~~~~F~i~ 182 (348)
. | |..+|...
T Consensus 388 ~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 388 AQRLDEYGTALASL 401 (405)
T ss_pred HHhccccchhHHhh
Confidence 4 5 76666543
No 108
>PRK15075 citrate-proton symporter; Provisional
Probab=98.23 E-value=2.9e-05 Score=77.30 Aligned_cols=112 Identities=11% Similarity=-0.000 Sum_probs=74.4
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhh-hhhhhh-ccc
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSV-GIGLLT-MST 83 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~-G~~ll~-~s~ 83 (348)
+....++++ ..+..|+++.+|++..++......+.....+..+++|+++|| +||||.+.++..+..+ +...+. ...
T Consensus 249 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~ 327 (434)
T PRK15075 249 MTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILTAYPALSWLVA 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 455667777 778888888899999988877777777778889999999999 5999988876554432 211111 111
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhcc
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIA 139 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~ 139 (348)
. + ........+++.+++.|...+...++..|.++++
T Consensus 328 ~----~----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~ 363 (434)
T PRK15075 328 A----P----------------SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAE 363 (434)
T ss_pred C----C----------------chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCC
Confidence 0 0 1222333445556677777776777778777643
No 109
>PRK09669 putative symporter YagG; Provisional
Probab=98.22 E-value=2.2e-05 Score=78.35 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=95.8
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHH-HHHHHHHHhhhhhhhhcccCCccCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWM-LVFSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~t-i~~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
..+..|+++.+|++.+.++.+..+...+--+..++.|+++||. +||||- ++++.+...+..+++... |...
T Consensus 30 ~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~--p~~~--- 104 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT--PDFG--- 104 (444)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC--CCCC---
Confidence 4567788899999999999999999999999999999999994 698665 446767776766555432 3211
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcch-
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAII- 167 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~- 167 (348)
...+...+++...+..++...+.....++++|..++ ++|| .+...|.....| .++..
T Consensus 105 -----------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~--~~eR------~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 105 -----------ATGKIIYACVTYILLSLVYTAINVPYCAMPGAITND--PRER------HSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred -----------cchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC--HHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 012233444444445555556667777888876543 3443 334555555444 22222
Q ss_pred ---hhccc-----c-cchhhHHHHHHHHHHHHHH
Q 048319 168 ---PISYI-----K-PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 168 ---~~~yi-----~-g~~~~F~i~~~~~~i~~~v 192 (348)
+..+. + ||...+.+.++..++..++
T Consensus 166 ~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 166 ALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 12222 1 6777777666655554443
No 110
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.22 E-value=1.6e-05 Score=78.48 Aligned_cols=164 Identities=13% Similarity=0.080 Sum_probs=105.1
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.++..+++++. .....|++..+| +...++.+.........+..++.++++|| +||++++.++..+..++.+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHcc
Confidence 44455555555 444445555566 44555666666666777778889999999 5999999999999988887766531
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh-hhhhhhhhhhHHHHHHHHHh
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE-HISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~-e~~~~~~~~~~f~~~y~~in 162 (348)
.+...+++...+.++|.|..-+...++.+|..|+++-+ .++++ ..++..+.++.+
T Consensus 309 ---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---G~~~~~~~~~~~ 364 (437)
T TIGR00792 309 ---------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAE---GLVYSVRTFVRK 364 (437)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccch---HHHHHHHHHHHH
Confidence 12344556667788899988899999999988765321 11223 556666666555
Q ss_pred ---hhcchhhcccc---cc--------------hhh-HHHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYIK---PW--------------NLR-FGVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi~---g~--------------~~~-F~i~~~~~~i~~~vf~ 194 (348)
.+++.+.+++- || ++. ..+|+++.+++++++.
T Consensus 365 ~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~ 417 (437)
T TIGR00792 365 LGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLLAAIIIG 417 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444331 33 223 3356677766666554
No 111
>PRK03545 putative arabinose transporter; Provisional
Probab=98.22 E-value=5.4e-05 Score=73.99 Aligned_cols=156 Identities=12% Similarity=-0.010 Sum_probs=104.7
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
+--..+++. ..+..|+.+.+|++..+++.+...+.....+..+++|+++||+ ||++ +..+..+..++..++....
T Consensus 216 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~-~~~~~~~~~~~~~~l~~~~-- 291 (390)
T PRK03545 216 VVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGF-LLIAIALLLVCLLLLLPAA-- 291 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhH-HHHHHHHHHHHHHHHHHHh--
Confidence 334455556 6566778888999999999999999889999999999999994 8775 4555555555544332211
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
.+...+++...+.+++.++.-+...+.+.+..++ + + .+...++....+
T Consensus 292 -------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~----~---~---~~~~g~~~~~~~~g~ 342 (390)
T PRK03545 292 -------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD----A---T---DVAMALFSGIFNIGI 342 (390)
T ss_pred -------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC----c---H---HHHHHHHHHHHHHHH
Confidence 0234555566677788777777666666654332 1 2 444555444444
Q ss_pred hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHh
Q 048319 163 VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 163 ~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+|+.+.+++- |++..|.+.++..++++++++.
T Consensus 343 ~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 343 GAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 56666666653 9999999888888887776654
No 112
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.22 E-value=1e-05 Score=82.55 Aligned_cols=139 Identities=16% Similarity=0.214 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHH
Q 048319 32 HAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFY 111 (348)
Q Consensus 32 ~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~ 111 (348)
+-+.+.+.+...+.+..++.|.++|+ +|||++++++.+++.+|.++...+. +...++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~iG~ii~~~a~----------------------~~~~l~ 146 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLIGAIIIALAP----------------------SWYQLI 146 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHhh----------------------hHHHHH
Confidence 34788999999999999999999999 5999999999999999999988762 467899
Q ss_pred HHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc----cchhhHHH---
Q 048319 112 AALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK----PWNLRFGV--- 181 (348)
Q Consensus 112 ~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~----g~~~~F~i--- 181 (348)
+|.++.++|.|+.-..++.+.+|-= |++. | ...-+.+.+.++ +++...-...+ +|+..+++
T Consensus 147 ~GR~l~G~g~G~~~~~~piy~sEia----p~~~--R---G~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 147 VGRILTGLGVGGASVLAPVYISEIA----PAHI--R---GTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALI 217 (513)
T ss_pred HHHHHhccchhhhhhcchhhHhhcC----Chhh--h---HHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHH
Confidence 9999999999999877777777433 3221 2 333333344444 44432222222 69977775
Q ss_pred HHHHHHHHHHHHHhcCcccccC
Q 048319 182 SAICTVIATLLFLSGTCTYENK 203 (348)
Q Consensus 182 ~~~~~~i~~~vf~~g~~~y~~~ 203 (348)
|++.++++ ..+.-.+|+|..+
T Consensus 218 ~~~~~~~~-~~~~pesp~~L~~ 238 (513)
T KOG0254|consen 218 PAVILALG-MLFLPESPRWLIE 238 (513)
T ss_pred HHHHHHHH-HHhCCCChHHHHH
Confidence 44444444 3344455655443
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=98.20 E-value=6.3e-05 Score=75.13 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=78.6
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHHH-HHHHHHHhhhhhhhhccc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWML-VFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~ti-~~~~~i~~~G~~ll~~s~ 83 (348)
.+++.-+ ..+..|+++.+|++..+++.+........-+..+++|+++||. +||||-. +++.+...+...++...
T Consensus 21 ~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~- 99 (448)
T PRK09848 21 NFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWV- 99 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhC-
Confidence 3333334 5577899999999999999999999999999999999999995 6888855 55655555444443221
Q ss_pred CCc-cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhc
Q 048319 84 PPV-LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEI 138 (348)
Q Consensus 84 ~p~-~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~ 138 (348)
|. .. .......++....+..++.+...+...++..+.-++
T Consensus 100 -~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~ 140 (448)
T PRK09848 100 -PTDWS--------------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ 140 (448)
T ss_pred -cCCCC--------------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC
Confidence 21 10 111233445555677888888888888886665543
No 114
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.20 E-value=1.2e-05 Score=81.95 Aligned_cols=149 Identities=19% Similarity=0.059 Sum_probs=110.6
Q ss_pred hhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccc
Q 048319 24 EVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIV 103 (348)
Q Consensus 24 ~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~ 103 (348)
+..+.+...++...+.|.....+.|++.|.+||+ +|||++++++.+++.++.++.+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 3456778888889999999999999999999999 899999999999999998666654
Q ss_pred cchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhhcccc-cchhhHHHH
Q 048319 104 KGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPISYIK-PWNLRFGVS 182 (348)
Q Consensus 104 ~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~~yi~-g~~~~F~i~ 182 (348)
.+...+.+...+.+++.++.-.+...+++|-+.++. | .. ...+..+.|+...+++....|+- +|++.+.+.
T Consensus 169 -~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~---R-~~---~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~ 240 (521)
T KOG0255|consen 169 -PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ---R-GL---ALTLGGFFFVGGLMLPAGAAYITRDWRWLFWII 240 (521)
T ss_pred -CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch---h-hH---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 146788889999999999999999999998777543 1 12 22223344445555555666665 999999987
Q ss_pred HHHHHHHHHH-HHh-cCccccc
Q 048319 183 AICTVIATLL-FLS-GTCTYEN 202 (348)
Q Consensus 183 ~~~~~i~~~v-f~~-g~~~y~~ 202 (348)
.+..++.++. ++. .+++++.
T Consensus 241 ~~~~~~~~~~~~l~~Es~rwl~ 262 (521)
T KOG0255|consen 241 SIPSGLFLLLWFLPPESPRWLL 262 (521)
T ss_pred HHHHHHHHHHHHccCcChHHHH
Confidence 6666555443 222 4444443
No 115
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.20 E-value=1.6e-05 Score=79.00 Aligned_cols=118 Identities=17% Similarity=0.071 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
...++..+++.-. ..+..|.+..+|.+ ...+.+.......+.+..++.++++||+ ||+|+...+..++.++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 232 LAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHHHHHHHH
Confidence 3456677777767 77788888888888 4455666667777788888889999995 9999999999999999998877
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE 142 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~ 142 (348)
... .+...+++...+.++|.|..-+...++.+|..|+++-+
T Consensus 310 ~~~--------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~ 350 (428)
T PF13347_consen 310 LGP--------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWK 350 (428)
T ss_pred HHh--------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHh
Confidence 521 13577888888999999999999999999999876543
No 116
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.20 E-value=3.8e-05 Score=77.52 Aligned_cols=166 Identities=13% Similarity=0.108 Sum_probs=101.1
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhh---hccchH-HHHHHHHHHhhhhhhhhccc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDT---IISKYW-MLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~---~lGr~~-ti~~~~~i~~~G~~ll~~s~ 83 (348)
.+.+..+ ..+..|+++.+|++.+.++.+..+...+--+..++.|+++|| .+|||| -++++.+...++..++...
T Consensus 19 ~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~- 97 (473)
T PRK10429 19 DFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA- 97 (473)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-
Confidence 3334444 557889999999999999999999999999999999999995 369955 5556777777777666532
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
|... .......+++...+..++...+.....++++|.-+ |++|| .+.++|-....|
T Consensus 98 -p~~~--------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~--~~~eR------~~l~~~~~~~~~i 154 (473)
T PRK10429 98 -HLFE--------------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTL--DKRER------EQLVPYPRFFASL 154 (473)
T ss_pred -CCCC--------------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCC--CHHHH------HHHHHHHHHHHHH
Confidence 2111 11123333334445567777778888888887554 34443 334554333333
Q ss_pred --hhc-chhhcc---cc------cchhhHHHHHHHHHHHHHHHHhcCc
Q 048319 163 --VAA-IIPISY---IK------PWNLRFGVSAICTVIATLLFLSGTC 198 (348)
Q Consensus 163 --~~~-~~~~~y---i~------g~~~~F~i~~~~~~i~~~vf~~g~~ 198 (348)
.+. ....+. .. ||.....+.++.++++.++-+.+.|
T Consensus 155 g~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 155 AGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCce
Confidence 221 111111 11 5666666666665554444444333
No 117
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.19 E-value=1.8e-05 Score=79.68 Aligned_cols=143 Identities=13% Similarity=0.084 Sum_probs=109.9
Q ss_pred HHHHHhhhhhCCchHH-HHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 17 TMMEYLTEVWKISVVH-AAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~-A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
.+..|+.+++|++..+ .+.+..+|.-.--++.+++|+++|| +|.|+.+.++.+...+..+++.+++
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl~t~L~~fa~------------ 113 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVCVWLLLLLGT------------ 113 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHHHHHHHHHHH------------
Confidence 3677899999999999 9999999999888999999999999 6999999999999999888887752
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+...+.+..++.++|.|..- .....++.-++++ | | .+...++..+.+ ++++.+..++
T Consensus 114 ----------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~k---E---R---~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 114 ----------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPS---R---Y---QRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHH---H---H---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888899999999887 7777777777643 3 3 556666667777 5555555554
Q ss_pred c--cchhhH---HHHHHHHHHHHHH
Q 048319 173 K--PWNLRF---GVSAICTVIATLL 192 (348)
Q Consensus 173 ~--g~~~~F---~i~~~~~~i~~~v 192 (348)
. ||+.-+ .|+...+.+++++
T Consensus 174 ~s~gWr~y~~Ln~Isl~s~~~a~~~ 198 (511)
T TIGR00806 174 VTLGWISYSTLNIISLVFMTFSVFL 198 (511)
T ss_pred HhcCchhHHHHHHHHHHHHHHHHHH
Confidence 4 666543 3566666665543
No 118
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.18 E-value=1.8e-05 Score=77.46 Aligned_cols=160 Identities=13% Similarity=0.063 Sum_probs=120.7
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
.++.++++-+.+...+-....+...+-|.+.|| +|++-.+++|.++.+...+++++..
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~--------------------- 157 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN--------------------- 157 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc---------------------
Confidence 467788889999999999999999999999997 7999999999999999999988752
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-c--cchhh
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-K--PWNLR 178 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-~--g~~~~ 178 (348)
..+.++++..+-++|......+-.++.||.|+++.. | .+....---.+. ++++-.-+.+ | |+.+.
T Consensus 158 -sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r---~~vmGialgfislG~lvgPpfGGilYe~~Gk~aP 228 (464)
T KOG3764|consen 158 -SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----R---GSVMGIALGFISLGVLVGPPFGGILYEFAGKSAP 228 (464)
T ss_pred -hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----h---hHHHHHHHHHHhccceecCCcccchHhhcCCcCc
Confidence 367899999999999999999999999999998753 2 333333222222 4444333333 3 99999
Q ss_pred HHHHHHHHHHHHHHH-HhcCcccccC--CCCCCchhHHHH
Q 048319 179 FGVSAICTVIATLLF-LSGTCTYENK--EPEGSPLTSVFR 215 (348)
Q Consensus 179 F~i~~~~~~i~~~vf-~~g~~~y~~~--~p~gs~l~~~~~ 215 (348)
|+|.++++++..++- +.-.|.-... .+++.|+.++.+
T Consensus 229 FlVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~ 268 (464)
T KOG3764|consen 229 FLVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLM 268 (464)
T ss_pred HHHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHh
Confidence 999888877665544 4444432222 467778877765
No 119
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.18 E-value=4.9e-05 Score=77.31 Aligned_cols=162 Identities=12% Similarity=0.014 Sum_probs=97.2
Q ss_pred HHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHH-HHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 8 DCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIF-SGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~-~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
-.++.++. .....|+.+.+|++..+.+.+.... .....+..+++|+++|| +||+|.+.++.++..++..++.+.+..
T Consensus 234 ~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l~~l~~~~l~~~ 312 (491)
T PRK11010 234 YKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGVSNAGYWLLSIT 312 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455555 5566777778999999998887544 35677888999999999 599998888776656554333221110
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
+ .+...++..+.+..+..|..-+...++..+..+++-+ ...+..++...+
T Consensus 313 ---~---------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~---------~t~~gl~~s~~~lg~ 365 (491)
T PRK11010 313 ---D---------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFS---------ATQFALLSALSAVGR 365 (491)
T ss_pred ---c---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc---------HHHHHHHHHHHHHHH
Confidence 0 0122233334443333332224445666665554432 223444444444
Q ss_pred hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHhcC
Q 048319 163 VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLSGT 197 (348)
Q Consensus 163 ~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~g~ 197 (348)
.+++.+.+++. ||...|.+.+++.+++++....-+
T Consensus 366 ~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 366 VYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455553 999999998888888776665543
No 120
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.17 E-value=9.9e-05 Score=72.43 Aligned_cols=138 Identities=12% Similarity=0.016 Sum_probs=91.5
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
+.+++. ..+..|+.+.+|++..+.+...........+..++.|+++|| +|++|.+.++.++..+|.+++.+...+ .
T Consensus 229 ~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~g~~~~~~~~~~--~ 305 (406)
T PRK15402 229 LPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVAGLLLAALATVI--S 305 (406)
T ss_pred HHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHc--c
Confidence 334444 445667777899999888877666666677788899999999 599999999999888888877664211 0
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchh
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIP 168 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~ 168 (348)
......+++++.+.++|.|..-|......-+..+ +++.+. .+.++...+..+.+++.+
T Consensus 306 ---------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~----~~~g~~---~~~~~~~~~~~~~~g~~~ 363 (406)
T PRK15402 306 ---------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD----VSKGTV---SAAMGMLSMLIFTVGIEL 363 (406)
T ss_pred ---------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc----ccccHH---HHHHHHHHHHHHHHHHHH
Confidence 1124556778888999999887776665433222 121222 444454444444666666
Q ss_pred hccc
Q 048319 169 ISYI 172 (348)
Q Consensus 169 ~~yi 172 (348)
.+++
T Consensus 364 ~~~l 367 (406)
T PRK15402 364 SKHA 367 (406)
T ss_pred HHhc
Confidence 6655
No 121
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.16 E-value=4.4e-05 Score=78.40 Aligned_cols=148 Identities=16% Similarity=-0.007 Sum_probs=110.2
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
.+.-|....+.+..+-..-..++.+++|.++||+ .|||.++.+-++..+..+++.+.+.-. .
T Consensus 39 ~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l~~~~-----------------~ 100 (524)
T PF05977_consen 39 QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVLAFFG-----------------L 100 (524)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHHHHhC-----------------c
Confidence 4555666666666666666678889999999995 999999999998887776666543311 1
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-c--cchhh
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-K--PWNLR 178 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-~--g~~~~ 178 (348)
.+.+.+++..+++++|.+...|.-++.+.+..++++ . .+...+.-...| ++|+.+.+.+ . |-...
T Consensus 101 ~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L---~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~ 171 (524)
T PF05977_consen 101 LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------L---PAANALNSISFNIARIIGPALGGILVAFFGAAAA 171 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------H---HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 235677777789999999999999999999988654 2 455666667777 7777766644 3 88889
Q ss_pred HHHHHHHHHHHHHHHHhcCcc
Q 048319 179 FGVSAICTVIATLLFLSGTCT 199 (348)
Q Consensus 179 F~i~~~~~~i~~~vf~~g~~~ 199 (348)
|.+.+++.+++.+++..-++.
T Consensus 172 f~inalsfl~~i~~l~~~~~~ 192 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPP 192 (524)
T ss_pred HHHHHHHHHHHHHHHHHcccc
Confidence 999999888877666555443
No 122
>PRK10133 L-fucose transporter; Provisional
Probab=98.15 E-value=3.8e-05 Score=76.94 Aligned_cols=153 Identities=11% Similarity=0.022 Sum_probs=106.6
Q ss_pred HHHHHHhH-HHHHHHh-hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 8 DCLAQFVM-WTMMEYL-TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl-~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
--.+.++. ..+..|+ ++.+|++..+++.....+.....+..+++|+++|| +||+|++..+..+..++..+..+. |
T Consensus 270 ~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~--~ 346 (438)
T PRK10133 270 YVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMALCLISAFA--G 346 (438)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHc--C
Confidence 33445555 5556675 56789999999999999999999999999999999 599999999988877766554432 1
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhc
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAA 165 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~ 165 (348)
.. .-+.++.+.++|.|.+-|++.+...++++++.. .- .+..+ ..+..+.++
T Consensus 347 --------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~----~a---s~l~~-~~~~g~~~~ 397 (438)
T PRK10133 347 --------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTK----YG---SSFIV-MTIIGGGIV 397 (438)
T ss_pred --------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhc----cc---hhHHh-HHhccchHH
Confidence 01 124567789999999999999999988765421 11 33333 222223444
Q ss_pred chhhcccc---c-chhhHHHHHHHHHHHHHH
Q 048319 166 IIPISYIK---P-WNLRFGVSAICTVIATLL 192 (348)
Q Consensus 166 ~~~~~yi~---g-~~~~F~i~~~~~~i~~~v 192 (348)
+.+.+++. | -+.+|.++.++.+.....
T Consensus 398 ~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 398 TPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 44555543 5 678888887776655443
No 123
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.14 E-value=7.4e-05 Score=75.60 Aligned_cols=157 Identities=17% Similarity=0.127 Sum_probs=107.1
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-----chHHHHHHHHHHh-hhh
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIIS-----KYWMLVFSSLAYS-VGI 76 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lG-----r~~ti~~~~~i~~-~G~ 76 (348)
+-+.+-+. +-+ ..+..++.+.+|++.++.+...+....-..+-|+ .|.++|++ + ||+-++++.++.. +++
T Consensus 34 ~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~~~~~~ 110 (468)
T TIGR00788 34 VLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLGSAILY 110 (468)
T ss_pred HHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHHHHHHH
Confidence 45667777 445 6777888889999999987776665554445454 99999996 6 7777778776652 333
Q ss_pred hhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHH
Q 048319 77 GLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKL 156 (348)
Q Consensus 77 ~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~ 156 (348)
..+... + .......+.+.+++++.+.......++..|+.+ ++++ .. ....++
T Consensus 111 ~~l~~~------~---------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~---~~~~s~ 162 (468)
T TIGR00788 111 GLLPGK------V---------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AG---PSLVSW 162 (468)
T ss_pred Hhcccc------c---------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cC---CCeeeH
Confidence 222211 1 012223336778999999999999999999998 3322 22 445667
Q ss_pred HHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHH
Q 048319 157 LLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 157 ~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.|.+.+ +++..+.+++. ||+..|.+.++..++..+
T Consensus 163 ~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 163 MWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 777655 66666666554 899999998887777644
No 124
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.14 E-value=3.4e-05 Score=73.84 Aligned_cols=136 Identities=12% Similarity=0.030 Sum_probs=98.6
Q ss_pred HHHHHHhhhh--hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCC
Q 048319 16 WTMMEYLTEV--WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGT 93 (348)
Q Consensus 16 ~~L~~Yl~~~--l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~ 93 (348)
..+..|+.+. +|++..+++.....+.+...+..+++++++|| +|++|.+.++..+..++.+++....
T Consensus 161 ~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~~~~~l~~~~~---------- 229 (310)
T TIGR01272 161 SFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAVLLSIGAALTH---------- 229 (310)
T ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHcC----------
Confidence 4478888754 79999999999999999999999999999999 6999999999888888775554321
Q ss_pred CCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hhcchhh
Q 048319 94 CSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VAAIIPI 169 (348)
Q Consensus 94 c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~~~~~~ 169 (348)
... ...++.++++|.+.+-|++.+...+.++++.. + .+.. ..++ .+.+.++
T Consensus 230 ------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~---asai----~~~~~~Gg~i~P~l~ 284 (310)
T TIGR01272 230 ------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----Q---GSGI----LCLAIVGGAIVPLLQ 284 (310)
T ss_pred ------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----h---hHHH----HHHHHhcchHHHHHH
Confidence 011 12366688999999999999999887775421 2 2332 1233 4444445
Q ss_pred cccc---cchhhHHHHHHHHH
Q 048319 170 SYIK---PWNLRFGVSAICTV 187 (348)
Q Consensus 170 ~yi~---g~~~~F~i~~~~~~ 187 (348)
+++. |.+.+|.++.++.+
T Consensus 285 G~lad~~g~~~a~~v~~~~~~ 305 (310)
T TIGR01272 285 GSLADCLGIQLAFALPVPCYL 305 (310)
T ss_pred HHHHHhccchHHHHHHHHHHH
Confidence 5443 77888887665544
No 125
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.14 E-value=4e-05 Score=76.21 Aligned_cols=158 Identities=13% Similarity=0.017 Sum_probs=90.5
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
-+.+|++ .-+..|+.+.+|++..+++...........+...++|+++|| +|||+.+.++..+..+....+... .+.
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~~~~~~~~~-~~~- 332 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAALFTVPILSA-LQN- 332 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHH-HHc-
Confidence 4567888 777888888899999888877777666666777788999999 599998887766543332211110 000
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-hhcc
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-VAAI 166 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-~~~~ 166 (348)
..+....+..+.+..++.|..-+...+..+|.|+.+. | .....+-|...| ..+.
T Consensus 333 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r---~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 333 ----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------R---ALGVGLSYAVANALFGG 387 (432)
T ss_pred ----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------c---chhhhHHHHHHHHHHHh
Confidence 0011111111111112222333456677888887542 4 667777777666 2232
Q ss_pred ---hhhcccc--c-chhhHHHHHHHHHHHHHHHH
Q 048319 167 ---IPISYIK--P-WNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 167 ---~~~~yi~--g-~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+..+++ | |...|.+.++..+++.+..+
T Consensus 388 ~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 388 SAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 2223343 4 55566655555555544433
No 126
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.13 E-value=7.6e-05 Score=74.33 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=87.5
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccc--hHHHHHHHHHHhhhhhhhhcccCC
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISK--YWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr--~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
-+.++++ ..+..|+.+.+|++..+++.....+.....+..+++|+++||+.+| ++......+...++...+.+. |
T Consensus 256 ~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~--~ 333 (434)
T PRK11663 256 YVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM--P 333 (434)
T ss_pred HHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc--c
Confidence 3444555 5567788778999999999999999999999999999999997533 222222221112222221111 1
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcc--hhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVE--STEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~--v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
. . +....+.. +..+|.+..-|. .....+|.++ ++. + .....+.++..+
T Consensus 334 ~--~----------------~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~----~~~--~---g~~~g~~~~~~~~ 384 (434)
T PRK11663 334 F--A----------------SYVMQAAC--FFTIGFFVFGPQMLIGMAAAECSH----KEA--A---GAATGFVGLFAYL 384 (434)
T ss_pred c--c----------------cHHHHHHH--HHHHHHHHhhHHHHHHHHHHhccc----Hhh--H---HhHHHHHHHHHHH
Confidence 0 0 11122222 222333222222 2233344332 221 3 445555555555
Q ss_pred --hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 163 --VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 163 --~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+++.+.+++. ||...|.+.+++.+++.++.+
T Consensus 385 g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 385 GAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 67777777764 999999988877776655444
No 127
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.13 E-value=7.8e-05 Score=77.36 Aligned_cols=145 Identities=13% Similarity=0.059 Sum_probs=96.9
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
++...|+..++|-+ ...+.+...+....-....+.|-++|. +|||+.++.+.+++.+|.++.+-+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vvG~Iv~atA------------- 128 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVVGSIVCATA------------- 128 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHhHHHHhhcC-------------
Confidence 44556777888876 445577777887777888889999999 599999999999999999886543
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-hhcchhhccc--
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-VAAIIPISYI-- 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-~~~~~~~~yi-- 172 (348)
.+...+..|..+.++|.|... ......+|..+.+. |... ..+..+.+ .++ ..++.+...+
T Consensus 129 ---------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~----R~~~--~~~~~~~~-i~~~~~~~~ia~~~~~ 191 (599)
T PF06609_consen 129 ---------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW----RGLG--LAIASIPF-IITTWISPLIAQLFAA 191 (599)
T ss_pred ---------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch----hhhH--hHHHHHHH-HhhhcccHHHHHHhcc
Confidence 135678899999999988775 34555676664321 1110 11111111 111 2333333222
Q ss_pred c-cchhhHHHHHHHHHHHHHH
Q 048319 173 K-PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 173 ~-g~~~~F~i~~~~~~i~~~v 192 (348)
+ +|||.|.+.++...++++.
T Consensus 192 ~~~WRw~~~~~~i~~~i~~vl 212 (599)
T PF06609_consen 192 HSGWRWIFYIFIIWSGIALVL 212 (599)
T ss_pred CCCcchHHHHHHHHHHHHHHH
Confidence 3 9999999988877776544
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.12 E-value=4.2e-05 Score=75.56 Aligned_cols=147 Identities=10% Similarity=0.068 Sum_probs=96.3
Q ss_pred HHHHHHhhhhh---CCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 16 WTMMEYLTEVW---KISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 16 ~~L~~Yl~~~l---~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
..+..|+.+.+ +.+....+.+.........+..+++|+++|| +||++.+.++.++..++.+++..+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~~~~l~~~~~--------- 313 (420)
T PRK09528 244 QQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAVRIIGSGFAT--------- 313 (420)
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHHHHHHHHhcc---------
Confidence 44556665543 4555666677777766667888899999999 5999999999999998887776531
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHH-HHHHHh---hhcchh
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKL-LLFMVP---VAAIIP 168 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~-~y~~in---~~~~~~ 168 (348)
+...++....+.+++.+...+....+..+.++++. + ...+.. +.+..+ .+++.+
T Consensus 314 -------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~---a~~~~~~~~~~~~lg~~ig~~~ 371 (420)
T PRK09528 314 -------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------S---ATIYLVGFQFAKQLGAVFLSTL 371 (420)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------e---eeeeeehHHHHHHHHHHHHHHH
Confidence 12345555666777777776766677777665432 2 222222 222222 566666
Q ss_pred hcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 169 ISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 169 ~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+++- ||+..|.+.++..++..++.+
T Consensus 372 ~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 372 AGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 66654 999999987776665554443
No 129
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.10 E-value=8e-05 Score=71.71 Aligned_cols=108 Identities=10% Similarity=0.048 Sum_probs=79.5
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
.+++. ..+..|+.+.+|+++.+++.+.........+..+++|++.|| +||++.+.++..+..++.+++.....+.
T Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 296 (385)
T TIGR00710 221 GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAVSAVLLEITAILG--- 296 (385)
T ss_pred HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHHHHhc---
Confidence 34444 444557777899999999999888888888999999999999 5999999999888888877766543211
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhh
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQL 136 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~ 136 (348)
......++....+.++|.+..-+.......|.+
T Consensus 297 --------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 329 (385)
T TIGR00710 297 --------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF 329 (385)
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 012344555566788888888887777666544
No 130
>PRK11462 putative transporter; Provisional
Probab=98.08 E-value=0.00016 Score=72.94 Aligned_cols=158 Identities=13% Similarity=0.152 Sum_probs=98.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhh---hccchHHHH-HHHHHHhhhhhhhhcccCCccCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDT---IISKYWMLV-FSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~---~lGr~~ti~-~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
..|..|.++.+|.+.+.++.+..+-..+=-+.-++-|+++|| .+||||--+ ++.+...++.++++.. |...+
T Consensus 30 ~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~--p~~s~-- 105 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST--PDLSM-- 105 (460)
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC--CCCCc--
Confidence 457788899999999999999999888888999999999998 489987665 5667777777776642 32111
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchh
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIP 168 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~ 168 (348)
..+...+++...+..++.-.+.-.-.+++++.-+ |++|| .+..+|.-...+ +++..+
T Consensus 106 ------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~--d~~eR------t~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 106 ------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITN--DPTQR------ISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred ------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcC--CHHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 1223333334344566666666677778886655 35554 344455444444 222222
Q ss_pred -hcccc---------cchhhHHHHHHHHHHHHHHHHhcC
Q 048319 169 -ISYIK---------PWNLRFGVSAICTVIATLLFLSGT 197 (348)
Q Consensus 169 -~~yi~---------g~~~~F~i~~~~~~i~~~vf~~g~ 197 (348)
.+.++ ||.....+-++..+++..+...+.
T Consensus 166 ~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~ 204 (460)
T PRK11462 166 MMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTT 204 (460)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 12221 566666555555544444444433
No 131
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.06 E-value=5.2e-05 Score=72.90 Aligned_cols=136 Identities=10% Similarity=0.025 Sum_probs=97.2
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHH-HHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSG-LVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~-~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
-++-.++++++ ..+..|+++ +|++..+.+.+...... ...+..+++|+++|| +||+|.+.++.++..++..++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888888 888889887 99999999888877664 456778899999999 599999999998888876655442
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
+. ..+. .+. ...+...+.....+.+++.|..-+...++..+..+++. + .+.|..++...|
T Consensus 296 ~~-~~~~-----~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~---g~~~g~~~~~~~ 355 (356)
T TIGR00901 296 AS-NGHH-----DGI-----TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------G---ATQMALLSSLSA 355 (356)
T ss_pred Hh-cCcc-----ccc-----ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------c---HHHHHHHHHHHh
Confidence 11 0000 000 00123455566667789999999999999998887653 3 667777666544
No 132
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.04 E-value=0.00024 Score=71.08 Aligned_cols=145 Identities=12% Similarity=0.035 Sum_probs=88.6
Q ss_pred HhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCc
Q 048319 21 YLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPE 100 (348)
Q Consensus 21 Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~ 100 (348)
++.+.+|++...+............+..+++|+++|| +|||+.++++.++..++.+++.+...+.
T Consensus 296 ~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v~~~~l~~~~~~~-------------- 360 (479)
T PRK10077 296 EIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAIGMFSLGTAFYTQ-------------- 360 (479)
T ss_pred HHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHHHHHHHHHHHhcC--------------
Confidence 3345678887777666666666677888999999999 5999999999999999988776432110
Q ss_pred ccccchhHHHHHHHHHHHHhccc-CCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh------c
Q 048319 101 CIVKGHKILFYAALGLLAFASSS-CSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI------S 170 (348)
Q Consensus 101 c~~~~~~~~~~~~L~liaiG~G~-~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~------~ 170 (348)
........++.+.+.+.+. .-|+..+...|.++.+. | .....+.+...+ .+++.+. +
T Consensus 361 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r---~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 361 ----APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------R---GKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred ----cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------H---HHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 0112223344444444432 45788888888775321 3 445555554444 3332222 2
Q ss_pred ccc---cchhhHHHHHHHHHHHHHHH
Q 048319 171 YIK---PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 171 yi~---g~~~~F~i~~~~~~i~~~vf 193 (348)
|+. ||+..|.+-++..+++.++.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHH
Confidence 332 77888887665555554443
No 133
>PRK09848 glucuronide transporter; Provisional
Probab=98.04 E-value=6.8e-05 Score=74.88 Aligned_cols=166 Identities=10% Similarity=0.021 Sum_probs=104.3
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.++--+++++. .....|+++.+|.+...+............+...+.++++|| +|+++++.++.++..+|.+++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i~~~~~~~~- 314 (448)
T PRK09848 237 ALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTCGYLLFFWV- 314 (448)
T ss_pred HHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHHHHHHHHHc-
Confidence 33444555555 555567777888876655543333333455677788999999 599999999999999998777643
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhh-hhhhhhhhhHHHHHHHHHh
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEH-ISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e-~~~~~~~~~~f~~~y~~in 162 (348)
| ..+.+.+++++.+.++|.|...+...++.+|.-|+++-+. +|+. ..++..+-++.+
T Consensus 315 -~------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~---G~~~~~~~~~~k 372 (448)
T PRK09848 315 -S------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIE---GLTYSLFSFTRK 372 (448)
T ss_pred -C------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccch---hHHHHHHHHHHH
Confidence 1 0123456677888999999999999999998877653211 1112 334445444444
Q ss_pred ---hhcchhhccc-----------c------cchhhH-HHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYI-----------K------PWNLRF-GVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi-----------~------g~~~~F-~i~~~~~~i~~~vf~ 194 (348)
.++..+.+.+ | +.+..+ .+|+++++++.+++.
T Consensus 373 lg~aig~~i~g~~l~~~G~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 425 (448)
T PRK09848 373 CGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIW 425 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332221 1 333443 467777777776553
No 134
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.03 E-value=0.00011 Score=74.58 Aligned_cols=160 Identities=14% Similarity=0.063 Sum_probs=117.8
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccch--HHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKY--WMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~--~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
+...+ ..-..|.++.+|++..+-..+.-.-+..+.+..+++|++.|| +|.+ +++.++.+++.+-.+.-.+.-.|..
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 45556 677788999999999999888888888999999999999999 5999 8988888776331111111101110
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hh
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VA 164 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~ 164 (348)
. .-.+.+.+++.=.++++..|+..+..-++.++..+++. . ..+|..|-+..- .+
T Consensus 375 ~--------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e---~efFgly~i~gk~ss~l 431 (477)
T PF11700_consen 375 F--------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------E---AEFFGLYAITGKASSWL 431 (477)
T ss_pred c--------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------h---hHHHHHHHHHHHHHHHH
Confidence 0 00123446665568999999999999999998887653 2 678998887666 88
Q ss_pred cchhhcccc----cchhhHHHHHHHHHHHHHHHH
Q 048319 165 AIIPISYIK----PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 165 ~~~~~~yi~----g~~~~F~i~~~~~~i~~~vf~ 194 (348)
++.+.+.+. +.+.+|..-.+.++++++++.
T Consensus 432 GPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 432 GPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 888888775 588999988888888887664
No 135
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.02 E-value=7.1e-05 Score=75.99 Aligned_cols=114 Identities=13% Similarity=0.012 Sum_probs=88.3
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
..++--+++++. ..+..|+++.+|++..+++.....+.....+..+++|++.|| +||++.+..+.++..+|.+++...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~~~~~l~~~ 345 (495)
T PRK14995 267 MAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSALSFYGLAMT 345 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHHHHHHHHHh
Confidence 344555677888 778889999999999999999999999999999999999999 599999999998888888766543
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
.. .......+..+.+.++|.|..-+.......+..+
T Consensus 346 ~~-------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~ 381 (495)
T PRK14995 346 DF-------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAP 381 (495)
T ss_pred cC-------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 11 0112344567778899999887777776665444
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.02 E-value=0.00016 Score=71.18 Aligned_cols=160 Identities=10% Similarity=-0.054 Sum_probs=99.2
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH-HHHHHHhhhhhhhhcc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLV-FSSLAYSVGIGLLTMS 82 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~-~~~~i~~~G~~ll~~s 82 (348)
-++.-.++++. ..+-.|+. .+|++..+++.+...+.....+..++.|+++|| +||++.+. .+.+...++.+.+...
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777 66667774 589999999888888888889999999999999 59988764 3333333332222211
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
|... ..+....++...+.+++.++.-| ..+...+. .|++ + ...+.+++...+
T Consensus 309 --~~~~---------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~----~~~~---~---g~~~g~~~~~~~ 360 (402)
T TIGR00897 309 --PQHF---------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTL----APKH---K---GAAMSVLNLSAG 360 (402)
T ss_pred --HHcc---------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh----Ccch---h---HHHHHHHHHHHH
Confidence 1000 01234445556666777766544 23333332 2322 3 566777777766
Q ss_pred ---hhcchhhccc-c--cchhhHHHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYI-K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi-~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+++.+.+++ + ||...|.+.+++.+++.++..
T Consensus 361 lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 361 LSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 5666666544 3 888888887777666655443
No 137
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.02 E-value=2e-05 Score=78.34 Aligned_cols=173 Identities=13% Similarity=0.080 Sum_probs=115.7
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhh---hccchHHHH-HHHHHHhhhhhhhhc
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDT---IISKYWMLV-FSSLAYSVGIGLLTM 81 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~---~lGr~~ti~-~~~~i~~~G~~ll~~ 81 (348)
.-.+.+.-. ..+..|+++.+|.+...++.+..+....--+..++-|+++|| .+||||-.+ +|.+...++.+++..
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~ 91 (428)
T PF13347_consen 12 GYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS 91 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc
Confidence 334444545 677888999999999999999999999999999999999994 479877655 677888888887774
Q ss_pred ccCC-ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 82 STPP-VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 82 s~~p-~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
. .| ... ...+...+++...+..++...+.-+..++++|..++.+ ||.+. .+.=+.+...
T Consensus 92 ~-~p~~~~--------------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--~R~~l---~~~~~~~~~~ 151 (428)
T PF13347_consen 92 P-PPAGLS--------------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--ERTRL---SSWRMIFSMI 151 (428)
T ss_pred c-ccchhh--------------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh--hhhhH---HHHHHHHHHH
Confidence 3 11 110 01223344566666788888899998999998876543 43323 3333333333
Q ss_pred Hh----hhcchhhcccc------cchhhHHHHHHHHHHHHHHHHhcCcc
Q 048319 161 VP----VAAIIPISYIK------PWNLRFGVSAICTVIATLLFLSGTCT 199 (348)
Q Consensus 161 in----~~~~~~~~yi~------g~~~~F~i~~~~~~i~~~vf~~g~~~ 199 (348)
.+ .+.+......+ ||.+.+.+.++..+++.++.....|.
T Consensus 152 g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 152 GSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 33 22222233332 58888888777777777776666655
No 138
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.01 E-value=6.9e-05 Score=74.92 Aligned_cols=113 Identities=13% Similarity=0.053 Sum_probs=86.7
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
++--+++++. ..+..|+++.+|++..+++...........+..+++|++.|| +||++.+.++..+..+|..++.....
T Consensus 265 ~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (485)
T TIGR00711 265 SLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAVGFYWRAFTFT 343 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 3445667777 778889999999999999999988888888999999999999 69999999999999888887763211
Q ss_pred CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 85 PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
|. .....++..+.+.++|.|..-+.......+.++
T Consensus 344 ~~------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~ 378 (485)
T TIGR00711 344 PD------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLP 378 (485)
T ss_pred CC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11 123445566778888988877666666655543
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.00 E-value=4e-05 Score=81.70 Aligned_cols=124 Identities=17% Similarity=0.068 Sum_probs=87.2
Q ss_pred HHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHH
Q 048319 39 IFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLA 118 (348)
Q Consensus 39 ~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~lia 118 (348)
.......+..+++|+++|| +||++++.++.++..++.+++.... +...+++...+.+
T Consensus 603 l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai~~ll~~~~~----------------------s~~~ll~~~~l~g 659 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCISCFFLSFGN----------------------SESAMIALLCLFG 659 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHc----------------------cHHHHHHHHHHHH
Confidence 3335566778999999999 5999999999999888877766531 1123334444556
Q ss_pred HhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc--cchhhHHHHHHHHHHHHHHH
Q 048319 119 FASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK--PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 119 iG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~--g~~~~F~i~~~~~~i~~~vf 193 (348)
++.++.-+...++.+|.|+.+. | .+.+.+.+...+ ++++.+.+++. +....|.+.+++++++.++.
T Consensus 660 ~~~~~~~~~~~a~~aEl~Pt~~------R---gta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~ 730 (742)
T TIGR01299 660 GLSIAAWNALDVLTVELYPSDK------R---ATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLA 730 (742)
T ss_pred HHHHHHHHHHHHHHHHHcCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 6666666778888998887542 4 678999988888 67776666543 66677888777777665544
Q ss_pred H
Q 048319 194 L 194 (348)
Q Consensus 194 ~ 194 (348)
+
T Consensus 731 ~ 731 (742)
T TIGR01299 731 L 731 (742)
T ss_pred H
Confidence 4
No 140
>PRK10091 MFS transport protein AraJ; Provisional
Probab=97.99 E-value=0.00016 Score=70.49 Aligned_cols=151 Identities=9% Similarity=-0.064 Sum_probs=95.1
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+.+.+|++..+++.....+.....+..+++|+++|| +|+++.+.++..+..++.+++.... +
T Consensus 220 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i~~~~~~~~~-~---------- 287 (382)
T PRK10091 220 SYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVLALLMLFFFG-G---------- 287 (382)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHHHHHHHHHHH-h----------
Confidence 445567777789999999999999999999999999999999 5999999999988888876554321 0
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhhccc-c-
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPISYI-K- 173 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~~yi-~- 173 (348)
......+...+..+|.++.-+.......+... ++|.. . ....+-.|...+.+++.+.+++ +
T Consensus 288 ----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~-~---~~~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 288 ----------MKTASLIFAFICCAGLFALSAPLQILLLQNAK---GGELL-G---AAGGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred ----------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCC---cchHH-H---HHHHHHHHHHHHHHHHHHhHHHHHc
Confidence 11233334444555555544433333333221 11111 1 1122333333336677666653 2
Q ss_pred --cchhhHHHHHHHHHHHHHHHHh
Q 048319 174 --PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
||+..|.+.++..+++...+..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 351 GLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHH
Confidence 7999999887777666554443
No 141
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.95 E-value=0.00022 Score=69.66 Aligned_cols=160 Identities=11% Similarity=-0.067 Sum_probs=96.9
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHH-HHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSG-LVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~-~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
++-..+..+. .....|+.+ +|++..+.+.+...... ...+..+++|+++|| +|++|.+.++..+..++..+.....
T Consensus 218 ~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~ 295 (390)
T TIGR02718 218 LLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGSLALLWFAQA 295 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566666 666677865 79999999998887765 444557899999999 5999999988776644333322211
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
.....+ .....+....+.+++.|..-+...+...+..++++ .+ .+.+.++....+
T Consensus 296 ~~~~~~----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~---g~~~~~~~~~~~l 351 (390)
T TIGR02718 296 AFWLAP----------------GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QA---GTDVTAVQSTRDL 351 (390)
T ss_pred HcccCC----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----ch---HHHHHHHHHHHHH
Confidence 111011 11222222333344455555666666665543311 12 445555555555
Q ss_pred --hhcchhhcccc---cchhhHHHHHHHHHHHHH
Q 048319 163 --VAAIIPISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 163 --~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.+++.+.+++. ||...|.+.+++.+++.+
T Consensus 352 g~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 352 GELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 66776666664 898999988776666544
No 142
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.95 E-value=0.00026 Score=69.94 Aligned_cols=159 Identities=20% Similarity=0.234 Sum_probs=98.9
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-cchHHH-HHHHHHHhhhhhhhhcccCCc
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTII-SKYWML-VFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~l-Gr~~ti-~~~~~i~~~G~~ll~~s~~p~ 86 (348)
+.=||+ .=..+|+.+..|++..+|+..++.|.......+++.||++|+++ |||.-. +++.+..++..+++..+
T Consensus 266 ivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~---- 341 (448)
T COG2271 266 VVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA---- 341 (448)
T ss_pred HHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC----
Confidence 334566 55567888899999999999999999999999999999999999 776544 34445555555555554
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHH-HHHHhhhc
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLL-LFMVPVAA 165 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~-y~~in~~~ 165 (348)
| ..+..+..+.+..+++- .+-|- -+.+-+--|-.|++..... ..+-++| |...+.++
T Consensus 342 --~--------------~~~~~l~~~~l~~iGf~--IyGPq--mLiGl~a~e~~pK~AaGtA--~Gf~Glf~Yl~Ga~~a 399 (448)
T COG2271 342 --P--------------NGSYLLDAILLFIIGFL--IYGPQ--MLIGLAAAEFVPKKAAGTA--TGFVGLFAYLIGAALA 399 (448)
T ss_pred --C--------------CccHHHHHHHHHHHHHH--HhhHH--HHHHHHHhccccHhhccch--hchhhhHHHHhhHHhc
Confidence 1 11233333334333333 33333 2334344444454332221 3334444 55566777
Q ss_pred chhhccc-c--cchhhHHHHHHHHHHHHHHHH
Q 048319 166 IIPISYI-K--PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 166 ~~~~~yi-~--g~~~~F~i~~~~~~i~~~vf~ 194 (348)
....+++ + ||..+|.+-.++.+++.+.++
T Consensus 400 ~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 400 GLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred CCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 7778877 4 999999876655555554443
No 143
>PRK10504 putative transporter; Provisional
Probab=97.94 E-value=0.00028 Score=70.69 Aligned_cols=137 Identities=13% Similarity=0.057 Sum_probs=91.8
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.++-.+++... .....|++..+|.+...++.+.............+.|.++||+ ||++++.++..+..++..++....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVSLLFMLVA 348 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhcc
Confidence 34555565444 4556677777999999999888777777777778899999995 999999999988888766665431
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
. ......+.+.+.+.++|.|..-+....+..+..++++ + ...+.++.+..+
T Consensus 349 ~-------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~~~~~~~~~~ 400 (471)
T PRK10504 349 L-------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------A---SSGNSLLSMIMQL 400 (471)
T ss_pred c-------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------c---cchHHHHHHHHHH
Confidence 1 0112333445666777887777777777776555332 3 556777777665
Q ss_pred --hhcchhhc
Q 048319 163 --VAAIIPIS 170 (348)
Q Consensus 163 --~~~~~~~~ 170 (348)
.+++.+.+
T Consensus 401 g~~ig~~i~g 410 (471)
T PRK10504 401 SMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHH
Confidence 44444433
No 144
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.94 E-value=0.00055 Score=68.06 Aligned_cols=66 Identities=9% Similarity=0.072 Sum_probs=56.7
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
+.|..|+++++|++..+.+.+.+.+.....+.++++|.++||+-|||+++.++.++..++..+...
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999999999999645688888888777666655544
No 145
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.93 E-value=0.00013 Score=73.87 Aligned_cols=49 Identities=22% Similarity=0.320 Sum_probs=41.5
Q ss_pred HhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccch
Q 048319 13 FVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKY 62 (348)
Q Consensus 13 yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~ 62 (348)
+++ ..+..|+.+.+|++..+++.+...+.....+..+++|+++||+ |||
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r 318 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARR 318 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHh
Confidence 344 4456788888999999999999999999999999999999994 765
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.91 E-value=0.0003 Score=68.72 Aligned_cols=157 Identities=14% Similarity=-0.005 Sum_probs=107.2
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
-++-..++.+. ..+..|+++ +|.+....+...........+...+.+.+.|| +|+++++.++.+...++.+++....
T Consensus 214 ~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T TIGR00902 214 VCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVGRWAIIGAIE 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHHHHHHHHhHh
Confidence 34445667777 777888875 89999999988887666666677888899999 4999999999999999988775431
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
+.+.++..-.+-++..|.+-+....+..++ ++++ +..- +..|+...+.+-
T Consensus 292 ----------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~---~~~~---q~~~~~~~~g~g~ 342 (382)
T TIGR00902 292 ----------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE---IAKL---QALYNALAMGGLI 342 (382)
T ss_pred ----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh---HHHH---HHHHHHHHHHHHH
Confidence 235566666788888888888887777764 3322 1112 344443333333
Q ss_pred hhcchhhcccc---cchhhHHHHHHHHHHHHHHH
Q 048319 163 VAAIIPISYIK---PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 163 ~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf 193 (348)
.+++.+.+++. |+ ..|.+.++..++++++.
T Consensus 343 ~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 343 AIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 55666666654 65 55666666666665443
No 147
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.91 E-value=0.00035 Score=67.43 Aligned_cols=55 Identities=13% Similarity=0.028 Sum_probs=47.0
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhh
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVG 75 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G 75 (348)
.|+.+.+|++..+++.+.........+..+++|+++|| +||+|++.++..+..+.
T Consensus 219 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 219 FVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHH
Confidence 35566789999999999999988999999999999999 59999999988765443
No 148
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.90 E-value=0.00039 Score=67.83 Aligned_cols=138 Identities=11% Similarity=-0.015 Sum_probs=89.8
Q ss_pred HHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccch----HHHHHHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 17 TMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKY----WMLVFSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~----~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
.+..|++ ++|.+..+.+.+.+.+.....+..+++|.++||+ ||+ +.+.++..+..+ . +...
T Consensus 26 ~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~--~-~~~~---------- 90 (382)
T PRK11128 26 FWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFAV--A-FWFG---------- 90 (382)
T ss_pred hHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHHH--H-HHHh----------
Confidence 4456774 5899999999999999999999999999999994 983 333333322221 1 1111
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI 169 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~ 169 (348)
..+.+.+++...+.+++.+...|...+...|. .++ + .+.+.+.....+ .+++.+.
T Consensus 91 -----------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~-------~---~~a~~~~~~~~~lg~~igp~lg 148 (382)
T PRK11128 91 -----------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQ-------I---GLDYGKVRLWGSIAFVIGSALT 148 (382)
T ss_pred -----------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH-Hhh-------c---cCCcchHHHHHHHHHHHHHHHH
Confidence 01346666777778899999999887776654 221 1 222333334444 6666666
Q ss_pred cccc---cchhhHHHHHHHHHHHHH
Q 048319 170 SYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 170 ~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.++- ||+..|.+.++..++..+
T Consensus 149 g~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T PRK11128 149 GKLVSWFGEQAILWILTAGVASMLL 173 (382)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHH
Confidence 6553 999999887765555443
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.89 E-value=0.00025 Score=70.64 Aligned_cols=159 Identities=14% Similarity=0.074 Sum_probs=88.3
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH---hhhhhhhhcc
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAY---SVGIGLLTMS 82 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~---~~G~~ll~~s 82 (348)
+--..+|++ ..+..|+++..|++..+++.....+.....+..+++|+++||+ |+.+....+..+. .++.+++...
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIAVIVYWMN 340 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHhc
Confidence 334555777 7677888888899999999988888888899999999999995 5433222333222 2222222221
Q ss_pred cCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 83 TPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 83 ~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
+. .+....+..+..++++..+.-+.......|.++++. + .....+++...+
T Consensus 341 --~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~ 391 (438)
T TIGR00712 341 --PA------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------A---GTAAGFTGLFGY 391 (438)
T ss_pred --CC------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------e---eeehhhhchHHH
Confidence 10 011222333333333322211122234444444321 2 334444444433
Q ss_pred ----hhcchhhcccc---cchhhHHHHHHHHHHHHHHHHh
Q 048319 163 ----VAAIIPISYIK---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 163 ----~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
.+++.+.+++- ||..+|.+.++..+++.+.++.
T Consensus 392 ~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T TIGR00712 392 LGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 431 (438)
T ss_pred hhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 45566666553 8999998877666666655543
No 150
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.88 E-value=0.00021 Score=67.82 Aligned_cols=126 Identities=10% Similarity=0.055 Sum_probs=91.4
Q ss_pred HHHHHHHHhH-HHHHHH-hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 6 WADCLAQFVM-WTMMEY-LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Y-l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
+.-.+.++++ .++..| +++.+|.+..+.+.+...+.....+..++++++.|+ .||++.+..+..+..++..++....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 220 LLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHhhc
Confidence 3344555555 344444 445689999999999888888888889999999999 5999999988777777666555431
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
. +...+++...+.+++.|...|...++..|..++++ + .+.+..++...+
T Consensus 299 --------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~~~~~~~~~ 347 (365)
T TIGR00900 299 --------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------L---GRVFGAQFSLSH 347 (365)
T ss_pred --------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------H---HHHHHHHHHHHH
Confidence 1 24566777888999999998988888888776432 3 556666666666
No 151
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.88 E-value=0.00049 Score=69.62 Aligned_cols=119 Identities=13% Similarity=-0.001 Sum_probs=86.6
Q ss_pred HHHHHHhhh-hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCC
Q 048319 16 WTMMEYLTE-VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTC 94 (348)
Q Consensus 16 ~~L~~Yl~~-~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c 94 (348)
+.+..++.+ ++|++.++.+.+.+.+....-+.-++.|+++||+ |.||.+.++.++..++.+++..+.- ..
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~a~~-~~------- 124 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGIAVQ-NP------- 124 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHc-cc-------
Confidence 556666655 7999999999999988887778889999999995 9999999999998888887765311 00
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
..+...+++.-.+.++| |+.-+.....+.+.|++++ + .....++-...|
T Consensus 125 ---------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------r---G~A~Gi~~g~G~ 173 (462)
T PRK15034 125 ---------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------Q---GSALGINGGLGN 173 (462)
T ss_pred ---------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------h---HHHHHHHHHHHh
Confidence 01356777777788888 5555777777887776432 2 445666544444
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.84 E-value=0.00021 Score=68.09 Aligned_cols=142 Identities=16% Similarity=0.090 Sum_probs=83.2
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHH--HHHhhhhhhhhcccCC
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSS--LAYSVGIGLLTMSTPP 85 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~--~i~~~G~~ll~~s~~p 85 (348)
-+.++++ ..+..|+.+.+|++..+++.....+.....+..+++|+++||..+|++...... ....++..++... +
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 306 (379)
T TIGR00881 229 YVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN--P 306 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC--c
Confidence 3444556 666778888899999999999999888889999999999998655555433222 2222222222211 1
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
..+.....+.+.+.++..++.-+.......|.++++. + ...+.++....+
T Consensus 307 ------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~~g~ 359 (379)
T TIGR00881 307 ------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------A---GTAAGFVGFFAYLGG 359 (379)
T ss_pred ------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------h---HHHHHHHHHhhhhhh
Confidence 0112233334444554444444555556666654322 3 556666655555
Q ss_pred hhcchhhcccc---cchhhH
Q 048319 163 VAAIIPISYIK---PWNLRF 179 (348)
Q Consensus 163 ~~~~~~~~yi~---g~~~~F 179 (348)
.+++.+.+++. ||+..|
T Consensus 360 ~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 360 ILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hhhhhhHHHHHHhhcccccC
Confidence 56666665554 665543
No 153
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.84 E-value=0.00027 Score=70.00 Aligned_cols=149 Identities=10% Similarity=-0.048 Sum_probs=88.5
Q ss_pred HHHHHHHHHhH-HHHHHHhhh-hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHH-HHHHHHHHhhhhhhhhc
Q 048319 5 LWADCLAQFVM-WTMMEYLTE-VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWM-LVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~-~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~t-i~~~~~i~~~G~~ll~~ 81 (348)
-++.-..++++ ..+..|+++ ..|++..+++...........+..+++|+++||+ ||++. +....++..+++.+...
T Consensus 251 ~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~~~~~~~ 329 (412)
T TIGR02332 251 YFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAGWLLASA 329 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHHHHHHHh
Confidence 45556678888 888888876 3577888888888888888888999999999995 76664 44444555555433221
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV 161 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i 161 (348)
. + +....+.++.+.++|....-+....... +..|.| ++ ...+.+.+...
T Consensus 330 ~--~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~--~~---~~a~g~~~~~~ 378 (412)
T TIGR02332 330 T--D--------------------HNLIQLLGIIMASMGSFSAMAIFWTTPD----QSISLQ--AR---AIAIAVINATG 378 (412)
T ss_pred c--C--------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcc----cccchH--HH---HHHHHHHHHhh
Confidence 1 0 0111222333333333222111111111 222222 24 56788888877
Q ss_pred h---hhcchhhcccc----cchhhHHHHHHH
Q 048319 162 P---VAAIIPISYIK----PWNLRFGVSAIC 185 (348)
Q Consensus 162 n---~~~~~~~~yi~----g~~~~F~i~~~~ 185 (348)
| .+++.+.+.+. +|..+|.+.++.
T Consensus 379 ~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 379 NIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 7 67777776654 599998876654
No 154
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.83 E-value=0.00076 Score=65.47 Aligned_cols=143 Identities=13% Similarity=0.032 Sum_probs=96.5
Q ss_pred hhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccc
Q 048319 24 EVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIV 103 (348)
Q Consensus 24 ~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~ 103 (348)
+..|+++.+-+.+...-.+.+.++..+.|.++|+ +||||..+..+++|.+..+.--.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~scl~k~~---------------------- 118 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSLSCLTKHS---------------------- 118 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHhc----------------------
Confidence 4578998888888777777777777888899999 59999999999999998753221
Q ss_pred cchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccc-hhhhhhhhhhhhHHHHHHHHHh----hhcchhhcccc-----
Q 048319 104 KGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAI-NEHISLSLIQREFFKLLLFMVP----VAAIIPISYIK----- 173 (348)
Q Consensus 104 ~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~-~~e~~~~~~~~~~f~~~y~~in----~~~~~~~~yi~----- 173 (348)
.+...+++|-++-++++...-..--+-...+.++.+ |+| .. ...|..--+..| .+++.+..++.
T Consensus 119 -~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L---~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~ 192 (354)
T PF05631_consen 119 -SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WL---SDTFSLATFFGNGVVAIGAGVVANVLADWFGF 192 (354)
T ss_pred -cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HH---HHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC
Confidence 236788999999999988776555544443333332 222 12 455654443455 33333333322
Q ss_pred cchhhHHHHHHHHHHHHHHHHh
Q 048319 174 PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 174 g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
|-...|..+.++.+++.++...
T Consensus 193 g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 193 GPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred CCcchHHHHHHHHHHHHHHHHh
Confidence 4577899988888887765544
No 155
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.82 E-value=0.00066 Score=66.31 Aligned_cols=139 Identities=8% Similarity=0.019 Sum_probs=88.1
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHH----HHHHHHhhhhhhhhcccCCccCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLV----FSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~----~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
..+..|+ +++|.+..+.+.+.+.+.....+.+++.|.++||+ ||++... ++..+..+ ++...
T Consensus 25 p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~---~~~~~--------- 90 (382)
T TIGR00902 25 PFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAA---AFSAG--------- 90 (382)
T ss_pred HHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH---HHHHh---------
Confidence 3344555 46899999999999999999999999999999995 8854332 22222221 11111
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchh
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIP 168 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~ 168 (348)
..+.+.+++...+.+.+.+..-|...++.. .++ +| + ...+.+.....+ .+++.+
T Consensus 91 ------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~-~~~----~~---~---~~~~g~~~~~~slG~~~g~~l 147 (382)
T TIGR00902 91 ------------AHNAWLLFIAIGLFALFFSAGMPIGDALAN-TWQ----KQ---F---GLDYGKVRLIGSAAFIIGSAL 147 (382)
T ss_pred ------------hhhHHHHHHHHHHHHHHHccchhHHHHHHH-HHH----HH---c---CCCccHHHHHHHHHHHHHHHH
Confidence 012456667776777787777777666643 221 11 2 344666666666 556655
Q ss_pred hcccc---cchhhHHHHHHHHHHHHH
Q 048319 169 ISYIK---PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 169 ~~yi~---g~~~~F~i~~~~~~i~~~ 191 (348)
.+++- ||+..|.+.++..++..+
T Consensus 148 ~g~l~~~~g~~~~f~~~~~~~~~~~~ 173 (382)
T TIGR00902 148 FGGLIGMFDEQNILAILTAGLAFMLI 173 (382)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 55543 999999887655444333
No 156
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00015 Score=73.43 Aligned_cols=142 Identities=12% Similarity=0.103 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHH
Q 048319 34 AGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAA 113 (348)
Q Consensus 34 ~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~ 113 (348)
+.+++.|.....+...++|++||++ |||++++++.++..++.++..++... ...-++.+|
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------~~~e~li~G 122 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------PSFEMLILG 122 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------hhHHHHHHH
Confidence 3456777777888888999999995 99999999999999988887776431 124578899
Q ss_pred HHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-hhc-chhhccc-c---cchhhHHHHHHHHH
Q 048319 114 LGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-VAA-IIPISYI-K---PWNLRFGVSAICTV 187 (348)
Q Consensus 114 L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-~~~-~~~~~yi-~---g~~~~F~i~~~~~~ 187 (348)
-.+.++..|.....++-+.. |..|++.|.. -+.++-.-..+- +++ ....+.+ . .|++.++++.+..+
T Consensus 123 R~i~Gl~~gl~~~~~pmyl~----E~sP~~~RG~---~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~ 195 (485)
T KOG0569|consen 123 RLIVGLACGLSTGLVPMYLT----EISPKNLRGA---LGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPAL 195 (485)
T ss_pred HHHHHHHhHHHHHHHHHHHh----hcChhhhccH---HHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHH
Confidence 99999999999888888887 6777765555 444443333222 555 3333333 2 79999999888666
Q ss_pred HHHH--HHHhcCccccc
Q 048319 188 IATL--LFLSGTCTYEN 202 (348)
Q Consensus 188 i~~~--vf~~g~~~y~~ 202 (348)
+.++ .++-.+|+|.-
T Consensus 196 ~~l~~l~~~PESPk~Ll 212 (485)
T KOG0569|consen 196 LQLALLPFLPESPKYLL 212 (485)
T ss_pred HHHHHHhcCCCCcchHH
Confidence 5544 44556677643
No 157
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.79 E-value=0.00036 Score=67.06 Aligned_cols=108 Identities=9% Similarity=0.003 Sum_probs=80.5
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
.+.-+.++++ ..+..|+++ .|++..+++.+...+.....+..+++|+++||+=+|++++.++..+..+|.+++.....
T Consensus 207 ~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 207 GLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445667777 777778865 79999999999999999999999999999999646777888888888888776654310
Q ss_pred CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 85 PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
+.... ...+.++|.|..-|...+...+..+
T Consensus 286 ---------------------~~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~ 315 (355)
T TIGR00896 286 ---------------------HGLWA--WALVLGLGQGGAFPLALTLIGLRSR 315 (355)
T ss_pred ---------------------hHHHH--HHHHHHHhhhhHhHHHHHHHHHhcc
Confidence 11111 3456788999988887777665443
No 158
>TIGR00895 2A0115 benzoate transport.
Probab=97.77 E-value=0.00033 Score=67.34 Aligned_cols=130 Identities=10% Similarity=-0.056 Sum_probs=87.1
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCC
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPP 85 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p 85 (348)
+.-+.++++ ..+. |+.+.+|++..+++.+...+.....+..+++|+++|| +||++.+........++..+.... .
T Consensus 261 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~ 336 (398)
T TIGR00895 261 MLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVFAVLVGSTL--F 336 (398)
T ss_pred HHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHh--h
Confidence 334455555 4333 6667789999999999999999999999999999999 598855554444443333332211 0
Q ss_pred ccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---
Q 048319 86 VLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 86 ~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--- 162 (348)
+...+++...+.+++.|+.-+...+..+|.++++. + ...+.+++...+
T Consensus 337 --------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 337 --------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------R---ATGVGWAIGIGRLGA 387 (398)
T ss_pred --------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------H---HHHHHHHHHHHHHHH
Confidence 13445666778888888888989999998876432 3 556777666555
Q ss_pred hhcchhh
Q 048319 163 VAAIIPI 169 (348)
Q Consensus 163 ~~~~~~~ 169 (348)
.+++.+.
T Consensus 388 ~~g~~~~ 394 (398)
T TIGR00895 388 IIGPILA 394 (398)
T ss_pred HHHHHhH
Confidence 4444443
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.77 E-value=0.00052 Score=67.55 Aligned_cols=127 Identities=11% Similarity=-0.010 Sum_probs=79.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+.+ .|++...++.+...+.....+..+++|+++|| +||++++..+.++..++..++... +.
T Consensus 252 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~--~~--------- 318 (426)
T PRK12307 252 GLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFLFIFPLFRI--PQ--------- 318 (426)
T ss_pred HHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHH--cc---------
Confidence 445666665 69999998888888888888889999999999 599999999988776665544321 10
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
.....+...++.+..+..+.-+..+.+..|.++++. + .+.....+...+ .+++.+.+++
T Consensus 319 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~---g~~~g~~~~~~~~~~~~gp~~~g~l 380 (426)
T PRK12307 319 ---------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------R---GLGTGLIYNLAATSGTFNSMAATWL 380 (426)
T ss_pred ---------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------H---hhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 011111112222223333444555666776665432 3 445555555555 6666666665
Q ss_pred c
Q 048319 173 K 173 (348)
Q Consensus 173 ~ 173 (348)
.
T Consensus 381 ~ 381 (426)
T PRK12307 381 G 381 (426)
T ss_pred H
Confidence 4
No 160
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.76 E-value=0.00053 Score=67.59 Aligned_cols=71 Identities=17% Similarity=0.129 Sum_probs=62.5
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
+|.|+ .-|-.|+++++|.+..+|+.+...+.....+.-.+||+||||+ |..|.+.+......++..++...
T Consensus 233 ~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 233 GFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHHHHHHHcc
Confidence 56778 7889999999999999999999999999999999999999995 88888888878878777777664
No 161
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.76 E-value=0.00041 Score=77.06 Aligned_cols=119 Identities=10% Similarity=0.020 Sum_probs=88.6
Q ss_pred HHhH-HHHHHHhhhhhCCchH-HHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 12 QFVM-WTMMEYLTEVWKISVV-HAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 12 ~yg~-~~L~~Yl~~~l~~~~~-~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
++.. ..+..|+.+.+|++.. .++.+...+.....+..++.|+++|+ .|+++.+.++.++..++.+++....
T Consensus 248 ~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~------ 320 (1146)
T PRK08633 248 SQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLALSLFLLPTAP------ 320 (1146)
T ss_pred HHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHHHHHHHHHhh------
Confidence 3344 5567788888999998 88888888888888889999999999 5999999888888887777665431
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
+...+++++++++++.|..-+...++..+..+++. + .+.+.++.+..+
T Consensus 321 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------r---g~~~~~~~~~~~ 368 (1146)
T PRK08633 321 ----------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------L---GKVLAANNFLQN 368 (1146)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------h---hhhhHHHHHHHH
Confidence 23456677788889999888888888876665432 3 455555555555
No 162
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.00058 Score=67.41 Aligned_cols=160 Identities=17% Similarity=0.049 Sum_probs=105.5
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
-+.|.. +.+-.|+++.-|++....+.+...|.....+..++||.++|| +.++++.....+..+.+..+...+.
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~~~---- 298 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFTGA---- 298 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHhcc----
Confidence 345666 677778888999999999999999999999999999999999 9999999998888888777766521
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
+.....+.+.+.+++.+..-+....-.++ ..|+. + +..-+++--+.| .+|
T Consensus 299 -----------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~----~~p~~---~---~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 299 -----------------SPALALALLFLWGFAFSPALQGLQTRLAR----LAPDA---A---DLAGSLNVAAFNLGIALG 351 (394)
T ss_pred -----------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcc----cCCCc---h---HHHHHHHHHHHHHHHHHH
Confidence 22333444444444444322222222222 11211 2 333334444555 333
Q ss_pred chhhccc-c--cchhhHHHHHHHHHHHHHHHHhcCccccc
Q 048319 166 IIPISYI-K--PWNLRFGVSAICTVIATLLFLSGTCTYEN 202 (348)
Q Consensus 166 ~~~~~yi-~--g~~~~F~i~~~~~~i~~~vf~~g~~~y~~ 202 (348)
..+-+.+ + ||.....+.++..+++.++.+...+++++
T Consensus 352 A~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 352 AALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3222222 2 88888899999999998888776665543
No 163
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.00014 Score=73.65 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=102.7
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
.++++..+-+.+.+.+.-...++.+++|+++||+ |-||.+.++.++..++.++..+++.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 5788999999999999999999999999999995 9999999999999999998877643
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHH---hhhcchhhccc---c-cchh
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMV---PVAAIIPISYI---K-PWNL 177 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~i---n~~~~~~~~yi---~-g~~~ 177 (348)
.+...+.+..++.+++.|..-|++..+.+.=.+ ++|| .++....+-.. ++++..+.+++ + ||+.
T Consensus 126 ~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P---~~Er------s~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 126 IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAP---PNER------STFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred hcchhhHHHHHHhHHHHhHHHhhhhceeeeECC---HHHH------HHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 112356777889999999999999887774333 3443 33444444333 23333333443 2 9999
Q ss_pred hHHHHHHHHHHHHHHHH
Q 048319 178 RFGVSAICTVIATLLFL 194 (348)
Q Consensus 178 ~F~i~~~~~~i~~~vf~ 194 (348)
.|-+-++.-++-.+++.
T Consensus 197 ifY~~g~~g~i~~~~w~ 213 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWF 213 (466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99987766555444443
No 164
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.70 E-value=0.00038 Score=70.30 Aligned_cols=165 Identities=15% Similarity=0.131 Sum_probs=95.0
Q ss_pred HHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 8 DCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
-.++++.. +....|++..++ +....+.+.........+..++.++++|| +||++++.++..+..++.+.+......
T Consensus 243 ~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~~~~- 319 (473)
T PRK10429 243 YNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVLSCGVLLLMGLA- 319 (473)
T ss_pred HHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 33444433 333333333344 33334444444445556666778999999 599999999988877776665432110
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh-hhhhhhhhhhHHHHHHHHHh---
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE-HISLSLIQREFFKLLLFMVP--- 162 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~-e~~~~~~~~~~f~~~y~~in--- 162 (348)
.+ .....+++...+.++|.|..-+...++.+|..|.++-+ .+|+. ..+|..+-+...
T Consensus 320 -~~---------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~---G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 320 -AP---------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE---SIAYSVQTMVVKGGS 380 (473)
T ss_pred -Cc---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch---hHHHHHHHHHHHHHH
Confidence 01 12345566667788899988899999999998865321 11222 335666555544
Q ss_pred hhcchhhccc-----------c------cchhhH-HHHHHHHHHHHHHHH
Q 048319 163 VAAIIPISYI-----------K------PWNLRF-GVSAICTVIATLLFL 194 (348)
Q Consensus 163 ~~~~~~~~yi-----------~------g~~~~F-~i~~~~~~i~~~vf~ 194 (348)
.+++.+.+++ | +-++.| .+|+++++++.+++.
T Consensus 381 al~~~i~g~~l~~~Gy~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 430 (473)
T PRK10429 381 AFAAFFIGVVLGLIGYVPNVEQSAQTLLGMQFIMIGLPTLFFMITLVLYF 430 (473)
T ss_pred HHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333322 1 222333 368888777776554
No 165
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.68 E-value=0.00085 Score=65.93 Aligned_cols=145 Identities=11% Similarity=0.037 Sum_probs=83.6
Q ss_pred HHhhhhhCCchHHHHHHHHHHHH-HHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSG-LVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~-~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
.|+.+.+|++..+.+.+...... ...+..+++|+++|| +||+|.+.++..+..+..+.+.+.+.. +
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l~~l~~~~~~~~---~--------- 300 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAVSNLGYWVLAVT---P--------- 300 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHhc---C---------
Confidence 45666789999888887766544 466778899999999 599999888777766654443322110 0
Q ss_pred CcccccchhHHHHHHHH----HHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhhcccc-
Q 048319 99 PECIVKGHKILFYAALG----LLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPISYIK- 173 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~----liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~~yi~- 173 (348)
.+...++++.. ..+++.+..-+....+..+.++.++ ...++..+.....++..+.+++.
T Consensus 301 ------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~G~l~~ 364 (402)
T PRK11902 301 ------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLSALASVGRVYVGPTSGYLVE 364 (402)
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01233333332 3444555555555555554443221 22233333212232333444443
Q ss_pred --cchhhHHHHHHHHHHHHHHH
Q 048319 174 --PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 174 --g~~~~F~i~~~~~~i~~~vf 193 (348)
||...|.+.+++.+++.++.
T Consensus 365 ~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 365 AYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HhChHHHHHHHHHHHHHHHHHH
Confidence 99999999888777776554
No 166
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.68 E-value=0.0014 Score=65.66 Aligned_cols=56 Identities=9% Similarity=0.103 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhc
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTII 59 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~l 59 (348)
..++--++++++ ..+-.|+.+.+|++..+++...........+..+++|+++|+..
T Consensus 269 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 269 AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677777 77888999999999999999888888888999999999999953
No 167
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.65 E-value=0.00034 Score=66.14 Aligned_cols=124 Identities=18% Similarity=0.111 Sum_probs=95.4
Q ss_pred HHHHhH-HHHHHHhhhhhCCc-hHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 10 LAQFVM-WTMMEYLTEVWKIS-VVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~-~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
+.+++. ..+..|+.+.+|++ ..+++.+.........+..+++|+++|| +|+++.+.+......++.+.+.+....
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 296 (352)
T PF07690_consen 220 FVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLILGALGLLLLPFS-- 296 (352)
T ss_dssp HHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHCCSHHH--
T ss_pred HHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 456667 77778888999999 8899888888888888889999999999 699999888888888877776664321
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
.+....+..+.+++++.|...|...++..|.++++. + .+.+..+....|
T Consensus 297 -----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~---g~~~g~~~~~~~ 345 (352)
T PF07690_consen 297 -----------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------R---GTAFGLFNSIGS 345 (352)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------H---HHHHHHHHHHHH
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------H---HHHHHHHHHHHH
Confidence 123556667888999999999999999998776432 3 455666555544
No 168
>PRK09669 putative symporter YagG; Provisional
Probab=97.64 E-value=0.0009 Score=66.78 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHH
Q 048319 36 IVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALG 115 (348)
Q Consensus 36 i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~ 115 (348)
+.........+..+++++++|| +||++++.++.++..++...+.+. | + .+...+++...
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~~~~~~~~~--~---~---------------~~~~~~~~~~~ 327 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVILSALIFFI--P---P---------------SNVWLIFALNI 327 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh--C---c---------------chHHHHHHHHH
Confidence 3333334445666788899999 599999999887766544333321 1 1 12455677778
Q ss_pred HHHHhcccCCcchhHHHHHhhhccchhh-hhhhhhhhhHHHHHHHHHh
Q 048319 116 LLAFASSSCSVESTEFAEEQLEIAINEH-ISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 116 liaiG~G~~k~~v~~~~adq~~~~~~~e-~~~~~~~~~~f~~~y~~in 162 (348)
+.++|.|..-|...++.+|..|.++-+. +|+. ..+|..+.++.+
T Consensus 328 i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~---g~~~s~~~~~~k 372 (444)
T PRK09669 328 LFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLD---GLVFSTNLFAIK 372 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcc---hHHHHHHHHHHH
Confidence 8999999999999999999988654321 1222 445666666666
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.54 E-value=0.0028 Score=62.39 Aligned_cols=147 Identities=11% Similarity=0.028 Sum_probs=90.9
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
.++++. ..+..++.+.+|++..+++.+...+.....+..++.+++.|| .+ ++.+..+..+..+...++....
T Consensus 230 ~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~-~~~l~~~~~~~~~~~~~l~~~~----- 302 (394)
T PRK10213 230 AGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SV-KLALAGAPLVLAVSALVLTLWG----- 302 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cc-hhHHHHHHHHHHHHHHHHHHHh-----
Confidence 445555 444344446789999999998888888888999999999999 34 4444444444333323332211
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
.+.+.++++..+.++|.+..-+..+++..+..+++. .+..+.++...+ .+|
T Consensus 303 ----------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~lg~~~G 356 (394)
T PRK10213 303 ----------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQA----------EKAGSIQVAVIQLANTCG 356 (394)
T ss_pred ----------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccH----------HHHHHHHHHHHHHHHHHH
Confidence 013455566777888998888888888876654321 222333333334 566
Q ss_pred chhhcccc---cchhhHHHHHHHHHHH
Q 048319 166 IIPISYIK---PWNLRFGVSAICTVIA 189 (348)
Q Consensus 166 ~~~~~yi~---g~~~~F~i~~~~~~i~ 189 (348)
+.+.+++- |+...|...++..++.
T Consensus 357 ~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 357 AAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 66666553 7777777766554433
No 170
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.50 E-value=0.0016 Score=62.40 Aligned_cols=109 Identities=13% Similarity=0.065 Sum_probs=80.9
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
..++++ ..+..|+++.+|+++.+++.+...+.....+..+++|+++|| +||++.+..+.....++..++.+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~~~~--- 314 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAMGAFLVVLGLVS--- 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHHHHHHHHhcCCC---
Confidence 345667 777889988999999999988888888888899999999999 599998888887777777666543110
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
..+...++..+.+..++.|...+...+..++..+
T Consensus 315 ---------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 348 (366)
T TIGR00886 315 ---------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR 348 (366)
T ss_pred ---------------cchHHHHHHHHHHHHHHhccccchhhhcchhhch
Confidence 0024455566666667777766777777777664
No 171
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.48 E-value=0.00049 Score=68.05 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=114.1
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
.++.++.++|.++-+.+.+.+..+--+.-.+.|.++|| -+.|+-+-+|.++..+-.+++..+.
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai~nil~Gfs~---------------- 115 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAIVNILFGFSP---------------- 115 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHHHHHHHhhhh----------------
Confidence 34445788999999999999999888999999999999 4999999999999888888777652
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh--cccc-
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI--SYIK- 173 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~--~yi~- 173 (348)
+...+.+-+.+.+.-+|.=-|...-.++.=|+.++ | .+..+.+-.+-| .+.+.++ .++-
T Consensus 116 ------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------R---G~~~siWn~shNiGGal~~~~~~la~~~~ 180 (448)
T COG2271 116 ------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------R---GTWWSIWNTSHNIGGALAPLVALLAFFAF 180 (448)
T ss_pred ------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------c---CceEEEehhhhhcccchHHHHHHHHHHHh
Confidence 35667777788999999988999888888887543 3 556677778888 4444444 4443
Q ss_pred --cchhhHHHHHHHH-HHHHHHHHhcCc
Q 048319 174 --PWNLRFGVSAICT-VIATLLFLSGTC 198 (348)
Q Consensus 174 --g~~~~F~i~~~~~-~i~~~vf~~g~~ 198 (348)
+|+.+|.+|+++. +++++.+..++.
T Consensus 181 ~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 181 HGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999998554 566666666554
No 172
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.46 E-value=0.0033 Score=61.33 Aligned_cols=145 Identities=12% Similarity=0.007 Sum_probs=91.3
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
+++.++ ..+..|+. ++|++..+.+...........+..++.|++.|| +|+++.+.++.++..++.+++....
T Consensus 219 ~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~~~~~~~~~~----- 291 (382)
T PRK11128 219 GSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVVRWGLMGSTT----- 291 (382)
T ss_pred HHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHhhh-----
Confidence 444455 66667775 489999888888876666666777889999999 5999999999998888877665431
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hh
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VA 164 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~ 164 (348)
+...+++...+.+++.|..-+.......++ ++++ + .+....+....+ .+
T Consensus 292 -----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~----~~~~---~---~~~~~~~~~~~~~~g~~i 344 (382)
T PRK11128 292 -----------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR----PGSE---V---IRLQALYSALAMGGSIAI 344 (382)
T ss_pred -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHhh---h---HHHHHHHHHHHHHHHHHH
Confidence 234556667777888777655555544432 2222 2 334554433333 45
Q ss_pred cchhhcccc---cchhhHHHHHHHHHHH
Q 048319 165 AIIPISYIK---PWNLRFGVSAICTVIA 189 (348)
Q Consensus 165 ~~~~~~yi~---g~~~~F~i~~~~~~i~ 189 (348)
++.+.+++. |+. .|.+.++..+++
T Consensus 345 g~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 345 MTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 566666654 553 444444443333
No 173
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.46 E-value=0.0015 Score=61.87 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=96.0
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHH-HHHHHhhhhhhhhcccCCccCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVF-SSLAYSVGIGLLTMSTPPVLAGFVGTCSEYK 98 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~-~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~ 98 (348)
+++++.+|+|.+.|+++.+..-+.+-.+..+-|.+.|++ ||.-+.+. +++...+||..++.+-. .|
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~tl~~H~~l~Ft~l---sP--------- 355 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILTLLGHSGLFFTFL---SP--------- 355 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHHHHHhhhHHhhhc---cH---------
Confidence 678899999999999999998888888888899999996 98766555 55667778988887632 22
Q ss_pred CcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc--
Q 048319 99 PECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK-- 173 (348)
Q Consensus 99 ~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~-- 173 (348)
|+++.++++.....-...-|.++...+|++ . ...|..-|-..| .+.+++++.+.
T Consensus 356 ------------y~~m~~lGLsysllAcslWP~va~~vpE~q------L---GTaygf~qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 356 ------------YTSMTFLGLSYSLLACSLWPCVASLVPEEQ------L---GTAYGFIQSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred ------------HHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------h---cchHHHHHHHHhhhhhHHhhhhheeecC
Confidence 355555555544443335556665555543 4 677888888888 45556666664
Q ss_pred --c--chhhHHHHHHHHHHHHHHH
Q 048319 174 --P--WNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 174 --g--~~~~F~i~~~~~~i~~~vf 193 (348)
| |--+|.+....|++..+..
T Consensus 415 ~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 415 DGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHH
Confidence 2 4446666666555444333
No 174
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.44 E-value=0.0016 Score=72.59 Aligned_cols=167 Identities=15% Similarity=-0.057 Sum_probs=99.2
Q ss_pred HHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 6 WADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 6 ~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
++-.+.++++ ..+..|+.+.+|.+...++.+...+.....+..++.|+++|++ ++.+.+.++.++..++.+.+.+...
T Consensus 235 ~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (1140)
T PRK06814 235 SWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFASS 313 (1140)
T ss_pred HHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhccc
Confidence 3344556667 7788899999999999999999999999999999999999985 5555555555555544443333200
Q ss_pred CccCCCCCCCCCCCCccc-ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-
Q 048319 85 PVLAGFVGTCSEYKPECI-VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP- 162 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~-~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in- 162 (348)
....+ +.... --.+- ...+.+.+++++.++++|.|..-+...++..+..+++. + .+.+..+.+..+
T Consensus 314 ~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~---G~v~g~~~~~~~~ 381 (1140)
T PRK06814 314 SVPAE--PAQLK-SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------R---ARVIAANNVLNAA 381 (1140)
T ss_pred ccccc--ccccc-chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------c---eeeeHHHHHHHHH
Confidence 00000 00000 00000 00123556677888899999888888888887666543 2 334444434333
Q ss_pred --hhcchhhcccc----cchhhHHHHHHH
Q 048319 163 --VAAIIPISYIK----PWNLRFGVSAIC 185 (348)
Q Consensus 163 --~~~~~~~~yi~----g~~~~F~i~~~~ 185 (348)
.++..+.+++. ++...|.+.+++
T Consensus 382 ~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 382 FMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 44444444442 555555544443
No 175
>PRK11043 putative transporter; Provisional
Probab=97.40 E-value=0.0066 Score=59.34 Aligned_cols=108 Identities=10% Similarity=-0.068 Sum_probs=69.6
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
.+++. ..+..|+. ..|++..+++...........+..++++++.|| +|+++++....+...++.+.+.+.... .+
T Consensus 218 ~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 293 (401)
T PRK11043 218 AFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAVSVIAIWLASLL--SH 293 (401)
T ss_pred HHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHHh--cc
Confidence 33444 43444554 579999988877766666667777888899999 599998777666665554443332110 00
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
.......++..+.+++.|..-|...+...++.+
T Consensus 294 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (401)
T PRK11043 294 ---------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP 326 (401)
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence 123445556677888888888888777666654
No 176
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.39 E-value=0.0041 Score=60.58 Aligned_cols=166 Identities=11% Similarity=0.126 Sum_probs=114.4
Q ss_pred HHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 8 DCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
..+.||.+ +=|-.++.+ -|+|.++|+..++..+.....+.+++=++++|.--+|+..+..+..+.+|.+-+.+. |.
T Consensus 220 qS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~--P~ 296 (395)
T COG2807 220 QSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA--PG 296 (395)
T ss_pred hHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh--hh
Confidence 45667777 666666664 699999999999999999999999999999998899999999999999998877753 21
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcc
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAI 166 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~ 166 (348)
+.+.+. ..++++|.|+.-|-.-.+..+.-+ |+++..+. +.+-.=.=..+-.+++
T Consensus 297 -------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~--~a~~Aa~L---SgmaQg~GYllAa~GP 350 (395)
T COG2807 297 -------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSS--DAAIAAAL---SGMAQGVGYLLAAFGP 350 (395)
T ss_pred -------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcC--ChHHHHHH---HHHhhhhhHHHHhhhh
Confidence 222222 578999999999988888887655 34433322 2221111011225677
Q ss_pred hhhcccc----cchhhHHH-HHHHHHHHHHHHHhcCccccc
Q 048319 167 IPISYIK----PWNLRFGV-SAICTVIATLLFLSGTCTYEN 202 (348)
Q Consensus 167 ~~~~yi~----g~~~~F~i-~~~~~~i~~~vf~~g~~~y~~ 202 (348)
.+++++. +|...... ..+..++...-+..++++|.+
T Consensus 351 ~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~~i~ 391 (395)
T COG2807 351 WLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNRYIR 391 (395)
T ss_pred hhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhHHhH
Confidence 7777775 88876553 333333344445667666653
No 177
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.39 E-value=0.008 Score=60.89 Aligned_cols=109 Identities=11% Similarity=0.011 Sum_probs=67.4
Q ss_pred HHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 11 AQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
+|.|. ..+-.|+++.+ +...+............+...+||++||| +|++|+++++.++..++...+.+. .|.-
T Consensus 267 ~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i~~~~~~l~-lp~~-- 340 (462)
T PRK15034 267 SFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAIFSALLFLT-LPGT-- 340 (462)
T ss_pred HHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHHHHHHHHHH-hccc--
Confidence 44445 45556666644 33333222333345566777899999998 599999999998777766443332 1210
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhc
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEI 138 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~ 138 (348)
+..+...+.++++.+.+..|.-+..+.-++.+-|++
T Consensus 341 -------------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 341 -------------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred -------------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 112456666666666677777777777777777764
No 178
>PRK10054 putative transporter; Provisional
Probab=97.38 E-value=0.0027 Score=62.55 Aligned_cols=159 Identities=14% Similarity=0.165 Sum_probs=96.9
Q ss_pred HHHHHHhhh--hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCC
Q 048319 16 WTMMEYLTE--VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGT 93 (348)
Q Consensus 16 ~~L~~Yl~~--~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~ 93 (348)
..+..|+.. +.+.+....+.+...+.........+.|.+.||+ |+++.+.++..+..+|..++.....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~--------- 296 (395)
T PRK10054 227 SCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGLVGFIFSGN--------- 296 (395)
T ss_pred hhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHHHHHHHcch---------
Confidence 444555543 2445555556666666555555556778899994 9999999999888888877654311
Q ss_pred CCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHH--HHhhhcchhhcc
Q 048319 94 CSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLF--MVPVAAIIPISY 171 (348)
Q Consensus 94 c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~--~in~~~~~~~~y 171 (348)
..+.+.++..+.++|.+..-|+..+.+.+.-+++ .+ .++|+-.-. ....+++.+.++
T Consensus 297 ------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~------~~---~~~~~~~~~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 297 ------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPG------MK---ASYFSAQSLGWLGAAINPLVSGV 355 (395)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc------cc---eehHhHHHHHHHHHHHHHHHHHH
Confidence 2344556677888888888888777777655432 13 444442211 112666666666
Q ss_pred cc---cchhhHHHHHHHHHHHHHHHHhcCcccccCCCCCCc
Q 048319 172 IK---PWNLRFGVSAICTVIATLLFLSGTCTYENKEPEGSP 209 (348)
Q Consensus 172 i~---g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~ 209 (348)
+- |....|.+-++...++.+.-..+.+ .||-|.|
T Consensus 356 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 392 (395)
T PRK10054 356 ILTTLPPWSLFVILALAIVAAWLLMLKGMR----ARPWGQP 392 (395)
T ss_pred HHHHcChhhHHHHHHHHHHHHHHHHHhccc----cCcccCC
Confidence 54 8888887765555555444443322 4555554
No 179
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.37 E-value=0.0022 Score=62.67 Aligned_cols=143 Identities=13% Similarity=0.123 Sum_probs=81.3
Q ss_pred HHHHhhhhh---CCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCC
Q 048319 18 MMEYLTEVW---KISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTC 94 (348)
Q Consensus 18 L~~Yl~~~l---~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c 94 (348)
+..|+.+.+ +.+....+.+.+.......+..++.|++.|| +||++.+.++.++..++..++....
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l~~~~~~~~~----------- 305 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSVRIIGSSFAT----------- 305 (396)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHhcC-----------
Confidence 345665544 4445555555555555556666888999999 5999999999999888887655431
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHH-HHHHHh---hhcchhhc
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKL-LLFMVP---VAAIIPIS 170 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~-~y~~in---~~~~~~~~ 170 (348)
+...+++...+.+++.+...........++.++ +.+ ...+.. +..+.+ .+++.+.+
T Consensus 306 -----------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~------~~~---at~~~~~~~~~~~lg~~~~~~l~G 365 (396)
T TIGR00882 306 -----------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV------RLS---ATIYLIGFQFAKQLAMIFLSTLAG 365 (396)
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------ceE---EEeehHHHHHHHHHHHHHHHHhHH
Confidence 123344444555555322222122222222221 112 222333 223333 66666667
Q ss_pred ccc---cchhhHHHHHHHHHHHHHH
Q 048319 171 YIK---PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 171 yi~---g~~~~F~i~~~~~~i~~~v 192 (348)
++- ||+..|.+.++..++..++
T Consensus 366 ~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 366 NMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHH
Confidence 663 8999999877777665543
No 180
>PRK11462 putative transporter; Provisional
Probab=97.37 E-value=0.0042 Score=62.67 Aligned_cols=114 Identities=12% Similarity=0.046 Sum_probs=69.0
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.++.-++.... +....|.+..+|.+. ..+.+...+...+.+..+++++++|| +|+++.+..+..+..++.+++.+.
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~~~~~~~~~- 313 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAVISLAMFFV- 313 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHHHHHHHHHh-
Confidence 44555555555 555555655565543 33345556666667778899999999 599888776555444433333221
Q ss_pred CCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccc
Q 048319 84 PPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAI 140 (348)
Q Consensus 84 ~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~ 140 (348)
|. .....+++...+.+++.|..-+...++.+|..|.++
T Consensus 314 -~~------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e 351 (460)
T PRK11462 314 -PM------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGE 351 (460)
T ss_pred -ch------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 10 112234445556677777777777889999888654
No 181
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.37 E-value=0.0021 Score=65.27 Aligned_cols=70 Identities=16% Similarity=0.032 Sum_probs=43.6
Q ss_pred HHHHhH-HHHHHHhhhhhCCchHHHHHH------------HHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhh
Q 048319 10 LAQFVM-WTMMEYLTEVWKISVVHAAGI------------VNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGI 76 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~~l~~~~~~A~~i------------~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~ 76 (348)
+.|||+ ..+..++ +.+|++..+++.. ............+++++++|| +|||++++++..+..++.
T Consensus 302 ~~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~~~~~~ 379 (502)
T TIGR00887 302 IAFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFILTVLF 379 (502)
T ss_pred HHHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHHHHHHH
Confidence 456666 4444445 3578765433211 111112233355778999999 599999999988888777
Q ss_pred hhhhc
Q 048319 77 GLLTM 81 (348)
Q Consensus 77 ~ll~~ 81 (348)
.++.+
T Consensus 380 ~~l~~ 384 (502)
T TIGR00887 380 FVLGF 384 (502)
T ss_pred HHHHH
Confidence 66664
No 182
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.35 E-value=0.0039 Score=63.93 Aligned_cols=159 Identities=11% Similarity=0.033 Sum_probs=107.7
Q ss_pred HHHHHHHHhH----HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 6 WADCLAQFVM----WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 6 ~~Er~a~yg~----~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
++-.+..+|+ ..+...+.+.++.+..+++.+.+...+..++...+.+.+.||+ |.|.+.+.|.+++.+|+++-..
T Consensus 52 fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~lssF 130 (509)
T KOG2504|consen 52 FLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLSSF 130 (509)
T ss_pred HHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHHHH
Confidence 3445556666 3355667778999999999999999999999999999999995 9999999999999999988665
Q ss_pred ccCCccCCCCCCCCCCCCcccccchhHHHHHHH-HHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHH
Q 048319 82 STPPVLAGFVGTCSEYKPECIVKGHKILFYAAL-GLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFM 160 (348)
Q Consensus 82 s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L-~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~ 160 (348)
++ +.+.+++.. ++.++|.|.........++.=|+.+ +..-+=.=++
T Consensus 131 ~~----------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-----------R~lA~Gia~~ 177 (509)
T KOG2504|consen 131 AT----------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-----------RALATGIAVS 177 (509)
T ss_pred Hh----------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-----------HHHHHhhhhc
Confidence 42 245566655 3578888887777767777444421 2222221222
Q ss_pred Hhhhcchhhccc-----c--cchhhHHHHHHHHHHHHHHHHhcCc
Q 048319 161 VPVAAIIPISYI-----K--PWNLRFGVSAICTVIATLLFLSGTC 198 (348)
Q Consensus 161 in~~~~~~~~yi-----~--g~~~~F~i~~~~~~i~~~vf~~g~~ 198 (348)
.--++..+.+.+ + ||+.++.+=+..++-.++.-..-+|
T Consensus 178 GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 178 GTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred cCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 223333333322 2 9999999766666444443333333
No 183
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.34 E-value=0.0063 Score=59.29 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=52.8
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
.|+.+.+|++..+.+.+.........+..++++++.|| +||++.+.++..+..++.+++.+.
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 228 VLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667789999998888888888888889999999999 599999999999988888877664
No 184
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.32 E-value=9.1e-06 Score=80.75 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHH
Q 048319 31 VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILF 110 (348)
Q Consensus 31 ~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~ 110 (348)
...+.+.+.+.....+..+++|+++|| +|||+++.++.+++.+|.++...+... .+...+
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------~~~~~~ 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMIIGSILIAFAPSY-------------------NNFWML 105 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc-ccccccccccccccccccccccccccc-------------------cccccc
Confidence 345667778888888888999999999 599999999999999999888776310 124567
Q ss_pred HHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc---c---cchhhHHH
Q 048319 111 YAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI---K---PWNLRFGV 181 (348)
Q Consensus 111 ~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi---~---g~~~~F~i 181 (348)
.++..+.++|.|+.-+....+..|.-+++ .| ..+..++..+.+ +++......+ . +|+..+.+
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~----~R-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~ 176 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPK----HR-----GFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIF 176 (451)
T ss_pred ccccccccccccccccccccccccccccc----cc-----cccccccccccccccccccccccccccccccccccccccc
Confidence 78889999999999999999988554332 22 222223222222 3333222211 2 49998887
Q ss_pred HHHHHHHHH--HHHHhcCccccc
Q 048319 182 SAICTVIAT--LLFLSGTCTYEN 202 (348)
Q Consensus 182 ~~~~~~i~~--~vf~~g~~~y~~ 202 (348)
+++..++.. ..++-.+|+|..
T Consensus 177 ~~~~~l~~~~~~~~~pESP~wL~ 199 (451)
T PF00083_consen 177 GAIPSLLVLLLRFFLPESPRWLL 199 (451)
T ss_pred cccccccccccccccccccceec
Confidence 665543322 234445566543
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=97.31 E-value=0.0037 Score=61.64 Aligned_cols=143 Identities=12% Similarity=0.079 Sum_probs=84.7
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
+..|+++..+ ++.+.+.+.............+.+.+.|+..+.++.+..+.++..++..++..+.
T Consensus 231 ~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~-------------- 295 (400)
T PRK11646 231 LPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS-------------- 295 (400)
T ss_pred hhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--------------
Confidence 3455655444 5566666665555444444444466666666777778888888888876665431
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK- 173 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~- 173 (348)
+.....+...+.++|.+...|...+...+..++++ + .+.+.++....+ .+++.+.+++-
T Consensus 296 --------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~---g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 296 --------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------R---GSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------c---hhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 12334445566778888888999988888776543 2 444555444444 66666666542
Q ss_pred -c-----chhhHHHHHHHHHHHHHH
Q 048319 174 -P-----WNLRFGVSAICTVIATLL 192 (348)
Q Consensus 174 -g-----~~~~F~i~~~~~~i~~~v 192 (348)
+ ....|.+..+..+++.++
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 359 LGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHhhcCCcchHHHHHHHHHHHHHHH
Confidence 1 244555544444444443
No 186
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.29 E-value=0.0051 Score=60.79 Aligned_cols=155 Identities=15% Similarity=0.114 Sum_probs=108.5
Q ss_pred HhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC-CccCCC
Q 048319 13 FVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP-PVLAGF 90 (348)
Q Consensus 13 yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~-p~~~~~ 90 (348)
.-+ +.|..++.+++|+|+.|...++..=.....++-++=|++.||+ |.|++-.++.++..+-.+.++.+.. |
T Consensus 30 W~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~IP~~~~~~a~~~~----- 103 (417)
T COG2223 30 WTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLLIPCLGLAFAVTYP----- 103 (417)
T ss_pred HHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHHHHHHHHHHHccCC-----
Confidence 345 7888999999999999999999999999999999999999995 8888888888888887777776532 2
Q ss_pred CCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcch
Q 048319 91 VGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAII 167 (348)
Q Consensus 91 ~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~ 167 (348)
+.+.+++.=.++++|.|.+- .-.++...-|+++ + + .....++= ..| .+...
T Consensus 104 ---------------~~~~ll~~gll~G~~GasFa-v~m~~~s~~fP~~----~--q---G~AlGI~g-~GN~G~av~q~ 157 (417)
T COG2223 104 ---------------STWQLLVIGLLLGLAGASFA-VGMPNASFFFPKE----K--Q---GLALGIAG-AGNLGVAVAQL 157 (417)
T ss_pred ---------------chHHHHHHHHHHhcccceeh-cccccccccCChh----h--h---hHHHHHhc-cccccHHHHHH
Confidence 12334443346677766553 3334555555533 2 2 33444433 666 44444
Q ss_pred hhcccc---c---chhhHHHHHHHHHHHHHHHHhcCcc
Q 048319 168 PISYIK---P---WNLRFGVSAICTVIATLLFLSGTCT 199 (348)
Q Consensus 168 ~~~yi~---g---~~~~F~i~~~~~~i~~~vf~~g~~~ 199 (348)
+.+.+- | |+..-.+..+.++++.+.++++.+.
T Consensus 158 ~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 158 VAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444432 6 9999999999999888888776654
No 187
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0041 Score=62.78 Aligned_cols=105 Identities=17% Similarity=0.133 Sum_probs=89.3
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
+.++.|.+..||.++..+............+..++.-.+.++ +||+++..++.++.+++.+++.+...
T Consensus 257 s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i~~~~~~f~~~----------- 324 (467)
T COG2211 257 SIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAVGYLLLYFTPA----------- 324 (467)
T ss_pred hhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHHHHHHHHhhcC-----------
Confidence 556677778899999999888888888777778888999999 59999999999999999999998731
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccch
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAIN 141 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~ 141 (348)
.+..+.++...+..+|.+..-+-..++++|-.|.++-
T Consensus 325 ---------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~ 361 (467)
T COG2211 325 ---------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEW 361 (467)
T ss_pred ---------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHH
Confidence 2467788888899999999999999999998886543
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.29 E-value=0.0052 Score=63.28 Aligned_cols=148 Identities=12% Similarity=0.133 Sum_probs=105.0
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..|..|..+.+|.+...-+.+.+++.....+..++.+.+.++ +++.+.+..+.+++.++++++.++.
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~~~~~lal~~------------ 305 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFALALLLLALSP------------ 305 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHHHHHHHhcch------------
Confidence 445567778899999999999999999999999999999888 6999999999988888877776642
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
+.+...+++.+.+++.........+.. +..-|++. + .|.++.|.+..+ .+|..+.+++
T Consensus 306 ----------~~~~~~~~l~l~G~~~~~~~~~~~t~~----Q~~~P~~~--~---GRv~si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 306 ----------SFWLALIALFLAGAAWIIANSSLNTLV----QLSVPDWV--R---GRVFSIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCHHH--H---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234455566666666555443333322 23334433 4 678888887777 5566566655
Q ss_pred c---cchhhHHHHHHHHHHHHHHHHh
Q 048319 173 K---PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 173 ~---g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
. |-..++.+++++++++.++.+.
T Consensus 367 a~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 367 ADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 7788888888887777766543
No 189
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.28 E-value=0.0079 Score=58.68 Aligned_cols=62 Identities=8% Similarity=-0.069 Sum_probs=38.7
Q ss_pred HHHHHHHhH-HHHHHHhhhhhCCchHHHHHHH--HH-HHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 048319 7 ADCLAQFVM-WTMMEYLTEVWKISVVHAAGIV--NI-FSGLVLVLQLPMQYLVDTIISKYWMLVFSSL 70 (348)
Q Consensus 7 ~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~--~~-~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~ 70 (348)
.+-+.+.=+ ..+..|++ +.|.+..+-+... .. +..-....|+.+++.+|| +||||.+++...
T Consensus 12 ~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~ 77 (390)
T TIGR02718 12 SQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQ 77 (390)
T ss_pred HHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHH
Confidence 333333333 44555554 5799998888763 22 333335666777888888 699999766653
No 190
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.26 E-value=0.0068 Score=59.61 Aligned_cols=144 Identities=10% Similarity=0.011 Sum_probs=88.6
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
..+..|+.+.+|++..+++.+...+.....+..++.+.+.|+ .++++.+..+..+ .++..++...
T Consensus 226 ~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~~-~~~~~~~~~~------------- 290 (393)
T PRK11195 226 FLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGILM-GLVVLLMALQ------------- 290 (393)
T ss_pred HHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHH-HHHHHHHHHH-------------
Confidence 334467778899999999999988888888888889999998 4888888777533 3332222221
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
.+.....+.+.+.+++.|.+.+...+...+. .|+|. .+ .+.+....+..| .++..+...+
T Consensus 291 ---------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~----~~~~~-~~---g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 291 ---------HSLLPAYPLLILIGALGGFFVVPMNALLQHR----GHVLV-GA---GHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred ---------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhh----Ccccc-cc---hhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 0233445566678888888888777776432 22221 13 445555566666 3333333333
Q ss_pred c--cchhhHHHHHHHHHHHHH
Q 048319 173 K--PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 173 ~--g~~~~F~i~~~~~~i~~~ 191 (348)
. |=+..+.+..++.+++..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (393)
T PRK11195 354 VKLGVPVVAVIVGFGLLVALA 374 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHH
Confidence 3 555555555544444443
No 191
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.0048 Score=62.60 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIIS 60 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lG 60 (348)
+..++|..+++-+ ..+-.|+.+.||++..+.+.....=.....+..+++|++||+...
T Consensus 265 ~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~ 323 (466)
T KOG2532|consen 265 ISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTF 323 (466)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567889999999 889999999999999999999988888899999999999999866
No 192
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.19 E-value=0.0027 Score=62.90 Aligned_cols=144 Identities=12% Similarity=0.059 Sum_probs=104.7
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
.|-.+.+|+++.+-..+--.-+..+.+..+++|+++|| +|-++++.++.+++.+-.+.+.....
T Consensus 277 ~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~~~~~~~~~~~--------------- 340 (438)
T COG2270 277 VFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSIAALYLIFLEG--------------- 340 (438)
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHHHHHHHHHccc---------------
Confidence 44455799999999888888888899999999999999 69999999999888876655554321
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-c--
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-K-- 173 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-~-- 173 (348)
....+..| .++++..|+..+..=++.++..++++. .++|..|-...- .+++...+.+ +
T Consensus 341 ------~~~f~i~g-ll~g~s~G~~qA~SRSy~~~lvp~~k~---------~~fFglyaltgra~S~~gp~lv~v~t~iT 404 (438)
T COG2270 341 ------ELDFWILG-LLVGTSLGGAQASSRSYLARLVPKGKE---------GRFFGLYALTGRAASFLGPFLVAVITQIT 404 (438)
T ss_pred ------cHHHHHHH-HHHHHhcchHHHHHHHHHHHhCCCccc---------cceeehhhhhhhHHHHHHHHHHHHHHHHh
Confidence 12333333 478999999999999999987775532 567887666555 5666555543 2
Q ss_pred -cchhhHHHHHHHHHHHHHHHHh
Q 048319 174 -PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 174 -g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
+-+.++..-.+.+++++++++.
T Consensus 405 g~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 405 GSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred cchhhHHHHHHHHHHhhHhhEEe
Confidence 7777777666667777665543
No 193
>TIGR00898 2A0119 cation transport protein.
Probab=97.13 E-value=0.0051 Score=62.13 Aligned_cols=119 Identities=15% Similarity=0.042 Sum_probs=71.3
Q ss_pred HHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcc
Q 048319 43 LVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASS 122 (348)
Q Consensus 43 ~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G 122 (348)
......+++++++|| +|||+.+.++.++..++.+++..... . ......+...+..++.+
T Consensus 367 ~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~~~l~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~ 425 (505)
T TIGR00898 367 VELPAKLITLLLIDR-LGRRYTMAASLLLAGVALLLLLFVPV-------------------D-LYFLRTALAVLGKFGIT 425 (505)
T ss_pred HHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHcCC-------------------C-chHHHHHHHHHHHHHHH
Confidence 445567788999999 59999999999888888776654311 0 11222233334444555
Q ss_pred cCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc-cchhhHHHHHHHHHHHHH
Q 048319 123 SCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK-PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 123 ~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~-g~~~~F~i~~~~~~i~~~ 191 (348)
+.-+....+.+|.++.+. | .....+...... .+++.+....+ ++...|.+.++..+++.+
T Consensus 426 ~~~~~~~~~~~e~~p~~~------r---~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~ 489 (505)
T TIGR00898 426 SAFQMVYLYTAELYPTVV------R---NLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGI 489 (505)
T ss_pred HHHHHHHHHhcccccHHH------H---hhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 555667777787776432 3 455666555544 55555554222 666666665555554443
No 194
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.12 E-value=0.0093 Score=59.21 Aligned_cols=142 Identities=11% Similarity=-0.028 Sum_probs=93.0
Q ss_pred hH-HHHHHHhhh-hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCC
Q 048319 14 VM-WTMMEYLTE-VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 14 g~-~~L~~Yl~~-~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
++ +.++.|+.+ ..+.+...++.....+.+...+.-+++++++|| ++++|.+.+...+..+.++++....
T Consensus 250 ~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~~~ll~~~~~-------- 320 (410)
T TIGR00885 250 MCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMALCLGSIFAG-------- 320 (410)
T ss_pred HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 44 556777654 235566667777777777788899999999999 5999999888888887777666531
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh--hhcchhh
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP--VAAIIPI 169 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in--~~~~~~~ 169 (348)
+. .....+.++++..+++-|.+.+...+..+++.. . .+. ..-+++- .+.+.+.
T Consensus 321 --------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~-----~---~s~--~l~~~~~Gga~~p~l~ 375 (410)
T TIGR00885 321 --------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK-----Y---GAA--GLVMAIIGGGIVPPLQ 375 (410)
T ss_pred --------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----h---hHH--HHHHHHhccchHHHHH
Confidence 01 123556667777777779999999988875431 1 122 2223322 3333333
Q ss_pred cccc---------cchhhHHHHHHHHHHH
Q 048319 170 SYIK---------PWNLRFGVSAICTVIA 189 (348)
Q Consensus 170 ~yi~---------g~~~~F~i~~~~~~i~ 189 (348)
+++. |++.+|.+|.++.+.-
T Consensus 376 G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 376 GFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 3332 3778899988887753
No 195
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.04 E-value=0.0038 Score=47.32 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=49.6
Q ss_pred HHHHhH-HHHHHHhhh---hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHH
Q 048319 10 LAQFVM-WTMMEYLTE---VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAY 72 (348)
Q Consensus 10 ~a~yg~-~~L~~Yl~~---~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~ 72 (348)
|-|||- +.+..|+.- ++|++..+.+.+.++-.....+.|.+.|++||++ ||+|.++.+..+.
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 345555 555555442 4899999999999999999999999999999995 8888888776553
No 196
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.97 E-value=0.018 Score=57.01 Aligned_cols=151 Identities=15% Similarity=0.196 Sum_probs=107.9
Q ss_pred HHHHHHhhh---------hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 16 WTMMEYLTE---------VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 16 ~~L~~Yl~~---------~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
..+-.++++ .+|++..+.+.+...|.+...+.=++.|++-.+.+|++++..+|+.+..++..++.+++..
T Consensus 220 ~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~- 298 (403)
T PF03209_consen 220 GTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL- 298 (403)
T ss_pred HHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 555566665 5899999999999999999988888999999988999999999999999999998887541
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---- 162 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---- 162 (348)
.+.+.|..++.++++|+|.+-....+..-|.-++++. .-+..-|=.+..
T Consensus 299 ------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~a---------G~~mG~WGaaQA~A~G 351 (403)
T PF03209_consen 299 ------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRA---------GLFMGAWGAAQAIARG 351 (403)
T ss_pred ------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcch---------hHHHHHHHHHHHHHHH
Confidence 1346889999999999999876666666655543321 111111111111
Q ss_pred ---hhcchhhccc------c---cchhhHHHHHHHHHHHHHHHH
Q 048319 163 ---VAAIIPISYI------K---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 163 ---~~~~~~~~yi------~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+++..+.-.. + +|...|.+-++.+++++++..
T Consensus 352 lg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 352 LGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211111 1 799999999999998877653
No 197
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.92 E-value=0.052 Score=53.97 Aligned_cols=69 Identities=16% Similarity=0.035 Sum_probs=54.4
Q ss_pred HHHHhH--HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhh
Q 048319 10 LAQFVM--WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLL 79 (348)
Q Consensus 10 ~a~yg~--~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll 79 (348)
|.-+|. ..+.+|+.+ .|++..+.+.+.+.......+.|.+.|++|||+..++|.+.+..++..+...++
T Consensus 15 f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 15 FFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 344455 567777765 689999999999999999999999999999998777888877766655544333
No 198
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.74 E-value=0.052 Score=54.94 Aligned_cols=123 Identities=13% Similarity=0.199 Sum_probs=84.8
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHHH-HHHHHHHhhhhhhhhcccCCccCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWML-VFSSLAYSVGIGLLTMSTPPVLAGFV 91 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~ti-~~~~~i~~~G~~ll~~s~~p~~~~~~ 91 (348)
.-|..|.|+..|++.+.|+.+..+--..=-+.-.+-|++.||. +||||=- +++.+-..+-..+++.+-
T Consensus 33 ~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p-------- 104 (467)
T COG2211 33 LYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP-------- 104 (467)
T ss_pred HHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC--------
Confidence 3456677889999999999999998888888888999999975 7887754 456677777777777651
Q ss_pred CCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 92 GTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 92 ~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
+-+ .+.+....++--.+..++.-.+.-.-.++.++.-+ ||+|| .+..+|-.+..|
T Consensus 105 -~~~-------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~--d~~ER------~~l~s~R~~~~~ 159 (467)
T COG2211 105 -DFS-------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ--DPQER------ASLTSWRMVFAS 159 (467)
T ss_pred -Ccc-------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC--CHHHH------HHHHHHHHHHHH
Confidence 110 12234444445556677777777666777776544 56665 445666666555
No 199
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.72 E-value=0.038 Score=53.96 Aligned_cols=154 Identities=13% Similarity=0.088 Sum_probs=114.0
Q ss_pred HHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 9 CLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 9 r~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
|-++-++..+..=+++++|+|.+.|+.+...=...--++..++.+++.| +|..|++..+.++..+|..+=..
T Consensus 25 R~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~~G~~iR~~------- 96 (395)
T COG2807 25 RPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIAAGILIRSL------- 96 (395)
T ss_pred chhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHHHHHHHHhc-------
Confidence 3334444556677788999999999999887666666777788899988 69999999999999999776332
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAA 165 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~ 165 (348)
.+...++.|-.+++.|.+....-+++++-+-|+++- ...-..|-.+++ .++
T Consensus 97 ----------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~----------~~mtglYs~sl~~~aaLa 150 (395)
T COG2807 97 ----------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV----------GLMTGLYSTSLGAGAALA 150 (395)
T ss_pred ----------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch----------hhHHhHHHHHHHHHHHHH
Confidence 135788899999999999888888888876666443 345566667777 555
Q ss_pred chhhcccc----cchhhHHHHHHHHHHHHHHHHhc
Q 048319 166 IIPISYIK----PWNLRFGVSAICTVIATLLFLSG 196 (348)
Q Consensus 166 ~~~~~yi~----g~~~~F~i~~~~~~i~~~vf~~g 196 (348)
....+.+. ||+.+.+.=++.-++++++.+--
T Consensus 151 a~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 151 AALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred hhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 55555553 79999887666666666655544
No 200
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.68 E-value=0.056 Score=50.34 Aligned_cols=63 Identities=16% Similarity=0.102 Sum_probs=55.2
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
.-+.+.+|+++.+-+.+..+-....++ .++.|.+.|+ .|.+-++.+|.+...+|+.++.+.-.
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~-~gp~~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDR-FGPWVVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345678999999999999888888886 5889999999 59999999999999999999988644
No 201
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.64 E-value=0.019 Score=57.22 Aligned_cols=57 Identities=18% Similarity=0.065 Sum_probs=45.0
Q ss_pred HhH--HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHH
Q 048319 13 FVM--WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSL 70 (348)
Q Consensus 13 yg~--~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~ 70 (348)
+|+ +.+..+|++..|++.++.+.+.++-.....+...+.|+++|| +|.+|.+++...
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~ 81 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIA 81 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHH
Confidence 455 667788888899999999999999999999999999999999 687777655443
No 202
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.50 E-value=0.016 Score=58.23 Aligned_cols=92 Identities=13% Similarity=-0.065 Sum_probs=71.6
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchh
Q 048319 28 ISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHK 107 (348)
Q Consensus 28 ~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~ 107 (348)
++....+.+..+-.....+.+++-||++|+ +||++..-...++.+++.++..++-. ++ + .....
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi~t~~~~~s~~---~~--~----------~~~~m 144 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMIICSALSGLSVG---TT--S----------PLGVM 144 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHHHHHHhccCCC---CC--C----------Ccchh
Confidence 677777788887778889999999999999 59999999999999999885544322 11 0 11235
Q ss_pred HHHHHHHHHHHHhcccCCcchhHHHHHh
Q 048319 108 ILFYAALGLLAFASSSCSVESTEFAEEQ 135 (348)
Q Consensus 108 ~~~~~~L~liaiG~G~~k~~v~~~~adq 135 (348)
..+..-..++++|.||--|+.++...|+
T Consensus 145 ~~L~~~R~~LGiGIGGDYPlSAtI~SE~ 172 (538)
T KOG0252|consen 145 MTLCFFRFLLGIGIGGDYPLSATIMSES 172 (538)
T ss_pred hHHHHHHHHhhccccCCCcchHHHhhhh
Confidence 6677778899999999999988877743
No 203
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.49 E-value=0.078 Score=51.91 Aligned_cols=154 Identities=12% Similarity=0.040 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhc--cchHHHHH-HHHHHhhhhhh
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTII--SKYWMLVF-SSLAYSVGIGL 78 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~l--Gr~~ti~~-~~~i~~~G~~l 78 (348)
+..++--.++|++ .-+..|+.+ .|++.. ++........ ...+..++++|+.. |||+.... ...+..++..+
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~ 273 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAIL---AGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLA 273 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHH---HHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456667788888 778888864 678764 3333222222 22344689999852 33333332 33333333333
Q ss_pred hhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHH
Q 048319 79 LTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLL 158 (348)
Q Consensus 79 l~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y 158 (348)
+..+. +.....+.+.+.+++.++.-+...++.+|.++++. | .+...+.+
T Consensus 274 ~~~~~----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------r---gt~~G~~~ 322 (368)
T TIGR00903 274 LAFEL----------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------H---GKAAGAIG 322 (368)
T ss_pred HHHcc----------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------c---Ccccchhh
Confidence 32211 01122233334445555555667788888886543 4 66788888
Q ss_pred HHHh---hhcchhhcccc-cchhhHHHHHHHHHHHHHH
Q 048319 159 FMVP---VAAIIPISYIK-PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 159 ~~in---~~~~~~~~yi~-g~~~~F~i~~~~~~i~~~v 192 (348)
...| .+++.+.+.+. |....|.+-++..+++.++
T Consensus 323 ~~g~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~i~~~~ 360 (368)
T TIGR00903 323 FTSRAISVALALAAMLFISSAEAYFTFLAILITIAFAI 360 (368)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8888 34454444333 6666666555555554443
No 204
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=96.49 E-value=0.028 Score=56.98 Aligned_cols=126 Identities=8% Similarity=-0.080 Sum_probs=80.4
Q ss_pred HHHhhhccchHHH--HHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhH
Q 048319 53 YLVDTIISKYWML--VFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTE 130 (348)
Q Consensus 53 ~lAD~~lGr~~ti--~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~ 130 (348)
.+.||..+..... .+|.++..+|.+.+.+...-...+ ...+.+.+.....+.++|....-|...+
T Consensus 338 ~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~-------------~~~s~~~~i~~~~~~~~ge~~~~p~~~~ 404 (475)
T TIGR00924 338 RLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG-------------GLTSPWFMVLIYLFQTLGELMISPLGLS 404 (475)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC-------------CccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4555533333333 778888888888776532100000 0124567888999999999999999999
Q ss_pred HHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc--c-cchhhHHHHHHHHHHHHHHHHhcCccc
Q 048319 131 FAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI--K-PWNLRFGVSAICTVIATLLFLSGTCTY 200 (348)
Q Consensus 131 ~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi--~-g~~~~F~i~~~~~~i~~~vf~~g~~~y 200 (348)
+.+++-+++. | .++...++.+.. .+++.+.... . ||..-|+..++.+++..++++..+|+.
T Consensus 405 ~~~~~aP~~~------~---g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 405 WWTKIAPQRL------M---GQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHhCCHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997655432 3 455555555443 5555444433 2 788889988888887777776655543
No 205
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.074 Score=54.16 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=54.3
Q ss_pred hhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 22 LTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 22 l~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
+...-|+++.+|.......+....++.++|.++-|| +|||+.++++..++.+-.+++++...
T Consensus 296 i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~~~~~~~~~~~ 357 (485)
T KOG0569|consen 296 IFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAVALLLMSIALF 357 (485)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 334579999999999999999999999999999999 59999999999999988888876543
No 206
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.42 E-value=0.037 Score=56.85 Aligned_cols=159 Identities=15% Similarity=0.149 Sum_probs=106.2
Q ss_pred HHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCc
Q 048319 8 DCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPV 86 (348)
Q Consensus 8 Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~ 86 (348)
-.++|+-. ..|..|.. ..|+++.+++.+++.......+.-++.|++||+. ..++..+....+...|+..+.+ |
T Consensus 310 ~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~gl~~~~~---p- 383 (509)
T KOG2504|consen 310 AYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIAGLARLFL---P- 383 (509)
T ss_pred HHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHHHHHHHHH---H-
Confidence 34444444 44555555 6899999999999999999999999999999995 4444444444444555555433 1
Q ss_pred cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---h
Q 048319 87 LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---V 163 (348)
Q Consensus 87 ~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~ 163 (348)
.| .....+..--.+.++..|.+-...+....|..+.++ . .+.|.+..+... +
T Consensus 384 ------~~----------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l---~~a~Gl~l~~~gi~~l 438 (509)
T KOG2504|consen 384 ------FA----------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------L---SNAYGLLLLFQGIGAL 438 (509)
T ss_pred ------Hh----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------c---chHHHHHHHHhHHHHH
Confidence 12 123445555556777777776666666666666442 3 556666555444 6
Q ss_pred hcchhhcccc----cchhhHHHHHHHHHHHHHHHHhcC
Q 048319 164 AAIIPISYIK----PWNLRFGVSAICTVIATLLFLSGT 197 (348)
Q Consensus 164 ~~~~~~~yi~----g~~~~F~i~~~~~~i~~~vf~~g~ 197 (348)
+++-+..++. +|...|-.+.+.++++....+..+
T Consensus 439 ~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 439 VGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 6666666664 699999999999998886665544
No 207
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.41 E-value=0.016 Score=59.28 Aligned_cols=137 Identities=13% Similarity=0.017 Sum_probs=92.9
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccccc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVK 104 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~ 104 (348)
.+|+...+=+.+.++|...-.+.-++++++.||+ .-.+.+....+. ..++++.+. -.
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~----w~~~~~~~~------------------~~ 131 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGIL----WGLFGFLTA------------------AV 131 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHH----HHHHHHHHH------------------HH
Confidence 5677788888888999999999999999999994 733333332222 222221100 00
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc-------c-
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI-------K- 173 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi-------~- 173 (348)
.+.+.+.+--.++++-.++.-|+.....+.=|++++ + ..-+.+||-+.+ .+|+.+...+ .
T Consensus 132 ~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e---~------g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 132 HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE---R------GLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh---h------hhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 134566677789999999999999999999998653 2 233666666555 5555554442 1
Q ss_pred -cchhhHHHHHHHHHHHHHHH
Q 048319 174 -PWNLRFGVSAICTVIATLLF 193 (348)
Q Consensus 174 -g~~~~F~i~~~~~~i~~~vf 193 (348)
||++.|+|+++.+++..++.
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred CCceeehhHHHHHHHHHHheE
Confidence 99999999998777555433
No 208
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=96.41 E-value=0.057 Score=53.45 Aligned_cols=139 Identities=12% Similarity=0.031 Sum_probs=78.5
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCcc
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVL 87 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~ 87 (348)
...+++. ..+-.|+.+.+|++..+++.......+...+...+.+.+.++. +++|.+.....+..+|..++.+... .
T Consensus 231 ~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig~~l~~~~~~--~ 307 (413)
T PRK15403 231 YIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVGLALLIVGNL--L 307 (413)
T ss_pred HHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHHHHHHHHHHH--H
Confidence 3344444 4445677778899999998877666555555554444444332 4445555555555666655544321 0
Q ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcch
Q 048319 88 AGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAII 167 (348)
Q Consensus 88 ~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~ 167 (348)
.+ ......++++.+.++|.|..-|++....-.|.+.. +. +. ++.++-..+....++..
T Consensus 308 ~~---------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~--~G--~a---~a~~~~~~~~~~~~~~~ 365 (413)
T PRK15403 308 WP---------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP--KG--TV---SASLNMVILMVMAVSVE 365 (413)
T ss_pred cc---------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC--Cc--HH---HHHHHHHHHHHHHHHHH
Confidence 01 01234567888889999999999886443333322 21 23 55566555555544444
Q ss_pred hhccc
Q 048319 168 PISYI 172 (348)
Q Consensus 168 ~~~yi 172 (348)
...|+
T Consensus 366 ~~g~~ 370 (413)
T PRK15403 366 IGRWL 370 (413)
T ss_pred HHHHH
Confidence 44454
No 209
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.25 E-value=0.054 Score=54.37 Aligned_cols=148 Identities=11% Similarity=0.066 Sum_probs=90.4
Q ss_pred HHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh--cc--chHHHHHHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 17 TMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI--IS--KYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~--lG--r~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
....|+.+.||++.++.+.. ......=+..-.+-|.++|.+ .| ||.=++++.++..++...+.+... .
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~-~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~--~----- 82 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRL-SSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA--S----- 82 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHH-HHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc--c-----
Confidence 34567888999999987654 444455556667788999998 34 555567788777666665554321 0
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhh
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPI 169 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~ 169 (348)
........+.+.+..+|.....-..-++..|.-+++. +++.+. + ++.|.+.+ +++....
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p-~~~g~l---q---S~~~~~~~~G~lv~~~l~ 144 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREP-ESRGDL---Q---SFVWGVRSVGSLVGSLLS 144 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC-chhHHH---H---HHHHHHHHHHHHHHHHhh
Confidence 0122344556677888888888778888887665543 322223 3 34444433 4444333
Q ss_pred cccc---cchhhHHHHHHHHHHHH
Q 048319 170 SYIK---PWNLRFGVSAICTVIAT 190 (348)
Q Consensus 170 ~yi~---g~~~~F~i~~~~~~i~~ 190 (348)
+++- +++..|.+.++.-++..
T Consensus 145 G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 145 GPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred hhhhhcCCCeEEehHHHHHHHHHH
Confidence 3332 77778887766555553
No 210
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.16 E-value=0.17 Score=49.25 Aligned_cols=98 Identities=10% Similarity=-0.084 Sum_probs=57.4
Q ss_pred HHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCC
Q 048319 20 EYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKP 99 (348)
Q Consensus 20 ~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~ 99 (348)
.|+.+.+|++..+++.+.........+...+++++.||+ || ....+.....++.+++.+.....
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~------------- 295 (394)
T PRK11652 232 VLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-ST--LMWQSVICCLLAGLLMWIPGWFG------------- 295 (394)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHHHHhc-------------
Confidence 466667899988887776655555555556666666664 42 23333333333333322211100
Q ss_pred cccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhh
Q 048319 100 ECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLE 137 (348)
Q Consensus 100 ~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~ 137 (348)
......+..+..+.++|.|..-|...+...|.++
T Consensus 296 ----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 329 (394)
T PRK11652 296 ----VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP 329 (394)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 0123445667778888999888888888877665
No 211
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.89 E-value=0.03 Score=57.25 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHHHHHHH-HHHhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWMLVFSS-LAYSVGI 76 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~ti~~~~-~i~~~G~ 76 (348)
++..+|-...-||. .-+.+|+++..|++..+++.+...+.+...+..++.|+++||. ..++..+..+. +...+|+
T Consensus 279 ~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~ 358 (495)
T KOG2533|consen 279 SLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGA 358 (495)
T ss_pred HHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 56677888888888 8888999987789999999999999999999999999999994 45555555544 4445565
Q ss_pred hhhhcc
Q 048319 77 GLLTMS 82 (348)
Q Consensus 77 ~ll~~s 82 (348)
+.+...
T Consensus 359 ~~l~~~ 364 (495)
T KOG2533|consen 359 ISLLAA 364 (495)
T ss_pred HHHHhh
Confidence 555544
No 212
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=95.52 E-value=0.1 Score=53.19 Aligned_cols=167 Identities=5% Similarity=-0.042 Sum_probs=90.9
Q ss_pred HHHhH-HHHHHHhhhhhCCchH----HHHHHHHHHHHHH-HHHhhhHHHHHhhhccchHH-------HHHHHHHHhhhhh
Q 048319 11 AQFVM-WTMMEYLTEVWKISVV----HAAGIVNIFSGLV-LVLQLPMQYLVDTIISKYWM-------LVFSSLAYSVGIG 77 (348)
Q Consensus 11 a~yg~-~~L~~Yl~~~l~~~~~----~A~~i~~~~~~~~-~~~pl~gg~lAD~~lGr~~t-------i~~~~~i~~~G~~ 77 (348)
.|..+ ..+..|.++..+.+.. .++.+.+...... .+.|+ .|.+.|| +|||+. +.+|.++..+|.+
T Consensus 284 ~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl-~~~l~~r-l~~r~~~~~~~~k~~~G~~l~~~~~~ 361 (489)
T PRK10207 284 LYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPI-LAGIYTH-LGSKGKDLSMPMKFTLGMFLCSLGFL 361 (489)
T ss_pred HHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHH-HHHHHHH-HhhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 34445 5666676643333211 1223323222334 44455 5689999 598873 7788888888876
Q ss_pred hhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHH
Q 048319 78 LLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLL 157 (348)
Q Consensus 78 ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~ 157 (348)
.+++...... . .+ ...+.+.+.....+.++|.+..-|...++..+.-+++. + ...-..+
T Consensus 362 ~~~~~~~~~~-~---~~--------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~---g~~~g~~ 420 (489)
T PRK10207 362 TAAAAGMWFA-D---AQ--------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------M---GFILGMW 420 (489)
T ss_pred HHHHHHHhhc-C---CC--------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------H---HHHHHHH
Confidence 5542211000 0 00 01124456677888999999999998888886544322 2 3344454
Q ss_pred HHHHh---hhcchhhccc-----------c--cchhhHHHHHHHHHHHHHHHHhcCccc
Q 048319 158 LFMVP---VAAIIPISYI-----------K--PWNLRFGVSAICTVIATLLFLSGTCTY 200 (348)
Q Consensus 158 y~~in---~~~~~~~~yi-----------~--g~~~~F~i~~~~~~i~~~vf~~g~~~y 200 (348)
+...+ .++..+..+. + .+...|..-++..++..++++.-.|++
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~ 479 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWL 479 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54444 4444333222 1 356677766666665555555544443
No 213
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.50 E-value=0.4 Score=42.68 Aligned_cols=93 Identities=14% Similarity=0.054 Sum_probs=67.7
Q ss_pred hhCCch--HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCccc
Q 048319 25 VWKISV--VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECI 102 (348)
Q Consensus 25 ~l~~~~--~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~ 102 (348)
.++.+. ...+.+...+.....+.+++.|.++|++ ||++.+..+.....++.++......
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~------------------ 91 (338)
T COG0477 31 TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN------------------ 91 (338)
T ss_pred HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc------------------
Confidence 444444 4677777777777777779999999998 9998888888776666444443311
Q ss_pred ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhc
Q 048319 103 VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEI 138 (348)
Q Consensus 103 ~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~ 138 (348)
.....+.+...+.+++.|...|...+..+|.+++
T Consensus 92 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 125 (338)
T COG0477 92 --VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE 125 (338)
T ss_pred --chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc
Confidence 1245555566668889898999999999998886
No 214
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.31 E-value=1.1 Score=44.33 Aligned_cols=170 Identities=16% Similarity=0.066 Sum_probs=97.1
Q ss_pred hhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccc
Q 048319 24 EVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIV 103 (348)
Q Consensus 24 ~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~ 103 (348)
...|.+..++..+.........+.....|.++|+ +||+|...+...+..+--++=..+ |
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v~~~is~~s--p------------------ 164 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGVFGVISGAS--P------------------ 164 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHHHHHhhcCC--C------------------
Confidence 4578889999888887777778888899999999 599998877655544322211111 2
Q ss_pred cchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-----hhcchhhcccccchhh
Q 048319 104 KGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-----VAAIIPISYIKPWNLR 178 (348)
Q Consensus 104 ~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-----~~~~~~~~yi~g~~~~ 178 (348)
+...+.+--+++++|.|| -|-..+.-++-.+..+ +.+ ..... ++|.+- +++-.+++.. ||++-
T Consensus 165 --nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~----r~~---~~V~~-~~waig~v~ea~law~vm~~~-gwr~~ 232 (528)
T KOG0253|consen 165 --NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH----RWL---LTVMS-FFWAIGQVFEALLAWGVMSNF-GWRYL 232 (528)
T ss_pred --CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC----CCc---chhHH-HHHHHHHHHHHHHHHHHHHhh-hHHHH
Confidence 344555666788999999 6777777666555433 223 33333 667666 2222222222 77765
Q ss_pred H-HHHHHHHHHHHHHHHh-cCcccccCCCCCCchhHHHHHHHHHHhhccCCCC
Q 048319 179 F-GVSAICTVIATLLFLS-GTCTYENKEPEGSPLTSVFRVFVASTTKLFYRLP 229 (348)
Q Consensus 179 F-~i~~~~~~i~~~vf~~-g~~~y~~~~p~gs~l~~~~~V~~~a~~~~~~~~~ 229 (348)
. ....-.|+.+...++. .+++|.- .+|++- +....+....|-.+.++|
T Consensus 233 l~~~~~pl~~~a~f~~w~~ESpRf~~--~~G~~~-kAletL~kiArmNg~qlp 282 (528)
T KOG0253|consen 233 LFTSSTPLMFAARFLVWVYESPRFYL--AKGDDY-KALETLHKIARMNGKQLP 282 (528)
T ss_pred HHHHHhHHHHHHHHHhhcccCcchhh--hcCChH-HHHHHHHHHHHhcCCCCC
Confidence 3 3444445555544433 4555543 335542 223333333343344444
No 215
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.16 E-value=0.38 Score=47.54 Aligned_cols=88 Identities=17% Similarity=0.042 Sum_probs=64.1
Q ss_pred chHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhH
Q 048319 29 SVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKI 108 (348)
Q Consensus 29 ~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~ 108 (348)
+.--|+-+-+.|+..-.+++.+.|-++|+| |||.+|+.+.+..++.+.+...+. +..
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~----------------------~F~ 122 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR----------------------NFA 122 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH----------------------HHH
Confidence 446677888999999999999999999997 999999999999999777776652 223
Q ss_pred HHHHHHHHHHHhcccCCcchhHHHHHhhhccc
Q 048319 109 LFYAALGLLAFASSSCSVESTEFAEEQLEIAI 140 (348)
Q Consensus 109 ~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~ 140 (348)
.+.++-.+.++-.|-+. .+-+.++|.+.|++
T Consensus 123 afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~ 153 (451)
T KOG2615|consen 123 AFVLARFLGGIFKGNLS-VIRAIISDVVSEKY 153 (451)
T ss_pred HHHHHHHhhhhccCchH-HHHHHHHhhcChhh
Confidence 44455555555444432 22366778777643
No 216
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.88 E-value=0.94 Score=45.60 Aligned_cols=71 Identities=13% Similarity=0.241 Sum_probs=60.1
Q ss_pred HHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCC
Q 048319 17 TMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAG 89 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~ 89 (348)
...+|.+..+| +...+.....+|+.....+-+.|-|+.|+ .|=|.+.++++....+|-.+=.+++.|.+.|
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~ 136 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGIGAWIRLISSLPFVPP 136 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHHHHHHhhhccCccccc
Confidence 35566666677 77777788888999999999999999999 5999999999999999999888887776544
No 217
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.64 E-value=0.0071 Score=62.47 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=0.0
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.+.+ ...+|. ..-+.-+.+.++++.++++.+.+.+.....++.++-+|.+++. -|=|-|-+|+++..+|.++.++-+
T Consensus 12 ~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPh 89 (539)
T PF03137_consen 12 GLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPH 89 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccH
Confidence 3444 555565 4445566778999999999999999999999999999999984 777888889999999999988755
Q ss_pred C
Q 048319 84 P 84 (348)
Q Consensus 84 ~ 84 (348)
.
T Consensus 90 f 90 (539)
T PF03137_consen 90 F 90 (539)
T ss_dssp -
T ss_pred h
Confidence 5
No 218
>PTZ00207 hypothetical protein; Provisional
Probab=94.10 E-value=0.21 Score=52.30 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=90.9
Q ss_pred hh-CCchHH--HHHHHHHHHHHHHHHhhhHHHHHhhhccchH-------HHH--HHHHHHhhhhhhhhcccCCccCCCCC
Q 048319 25 VW-KISVVH--AAGIVNIFSGLVLVLQLPMQYLVDTIISKYW-------MLV--FSSLAYSVGIGLLTMSTPPVLAGFVG 92 (348)
Q Consensus 25 ~l-~~~~~~--A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~-------ti~--~~~~i~~~G~~ll~~s~~p~~~~~~~ 92 (348)
.| |.+... .+..++.++.++++.-+.+|++. .++=||+ |+. +..+ ..+++++++++ .|
T Consensus 382 sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~-~p------- 451 (591)
T PTZ00207 382 ALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLT-LP------- 451 (591)
T ss_pred HhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHH-CC-------
Confidence 46 663333 33368888889999999999998 5555554 333 3444 77788888775 22
Q ss_pred CCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hhcchh
Q 048319 93 TCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VAAIIP 168 (348)
Q Consensus 93 ~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~~~~~ 168 (348)
...+|++-.+++++.|..-+...+...+.|. +|. ...||.-+.+.- ++...+
T Consensus 452 --------------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~---------g~~yN~~~~a~pigs~~~n~~l 507 (591)
T PTZ00207 452 --------------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDP---------AKHYNFCFLGSVLSAIFLNRLL 507 (591)
T ss_pred --------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cch---------HHHhhHHhHHHHHHHHHHHHHH
Confidence 1468999999999999999999999999999 654 335665444322 222222
Q ss_pred hccc--------------c--cchhhHHHHHHHHHHHHHH
Q 048319 169 ISYI--------------K--PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 169 ~~yi--------------~--g~~~~F~i~~~~~~i~~~v 192 (348)
.+++ + +++..|+|-+++.+++.++
T Consensus 508 ~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~ 547 (591)
T PTZ00207 508 YGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFIT 547 (591)
T ss_pred HHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHH
Confidence 3322 1 7999999877766666554
No 219
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.03 E-value=0.27 Score=52.35 Aligned_cols=174 Identities=13% Similarity=0.150 Sum_probs=106.5
Q ss_pred hH-HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC---Ccc--
Q 048319 14 VM-WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP---PVL-- 87 (348)
Q Consensus 14 g~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~---p~~-- 87 (348)
|. ...++=+.+.++++..+.+.+.+.+....-++-++-.|.+-|. =|=|.|-+|++++.+|.++.++-+. |.-
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhChHHhcCcchhh
Confidence 44 4445555567899999999999999999999999999998883 7888899999999999999887533 110
Q ss_pred --C---CC--C-------------CCCCCCCCcc--c---ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh
Q 048319 88 --A---GF--V-------------GTCSEYKPEC--I---VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE 142 (348)
Q Consensus 88 --~---~~--~-------------~~c~~~~~~c--~---~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~ 142 (348)
. +. + ..|......| + +..-+.++++|..+.++|.--+-| +|---.||...+
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t----lGisYiDDnvk~ 268 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT----LGISYIDDNVKK 268 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc----CCCccccccccc
Confidence 0 00 0 1111111222 1 111345778888888888765554 444444444332
Q ss_pred hhhhhhhhhhHHHHHHHHHh---hhcchhhcc----------------------cccchhhHHHHHHHHHHHHHHHHhcC
Q 048319 143 HISLSLIQREFFKLLLFMVP---VAAIIPISY----------------------IKPWNLRFGVSAICTVIATLLFLSGT 197 (348)
Q Consensus 143 e~~~~~~~~~~f~~~y~~in---~~~~~~~~y----------------------i~g~~~~F~i~~~~~~i~~~vf~~g~ 197 (348)
++ . ..++..+|.+-- .+|.++.++ |..||+||++++.+++++.+.+++--
T Consensus 269 ~~--S---plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP 343 (735)
T KOG3626|consen 269 KN--S---PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP 343 (735)
T ss_pred cC--C---cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 21 2 334444443211 222222221 11699999999988887766555433
No 220
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.57 E-value=0.03 Score=58.28 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHH
Q 048319 35 GIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAAL 114 (348)
Q Consensus 35 ~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L 114 (348)
.....+....+..+..+.-.+ +|+.-+-+..+.+|..++--.+...+. +..+.|...
T Consensus 10 ~~~~~~~~~d~~~~~~~~~~~------~~~g~~~s~~~il~~e~~e~~a~~g~~-----------------~nlv~ylt~ 66 (571)
T KOG1237|consen 10 VIYHDFTSVDYRGPLLGSSIA------FKTGGWLSAPFILGNEVLERLAFFGLV-----------------SNLVTYLTL 66 (571)
T ss_pred hhccccceeeccCCccccccc------ceechhHhHHHHHHHHHHHHHhHhcch-----------------hHHHHHHHH
Confidence 334444445555555444333 566666677778888777766553221 235667777
Q ss_pred HHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhhcccccchhhHHHHHHHHHHHHHHHH
Q 048319 115 GLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPISYIKPWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 115 ~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~~yi~g~~~~F~i~~~~~~i~~~vf~ 194 (348)
.+..-+ ++.++|++.++|+|+....-. +.+ ...|...|+.||..+.+- ..-.|+++...++.++..+-
T Consensus 67 ~~~~~~-~~aa~~v~~f~G~~~~~~l~g--~~l---aD~f~gry~tI~~~s~i~------~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 67 ELHASG-GGAANNVNAFGGTQFLLPLLG--AFL---ADSFLGRYFTINIGSLIS------LLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred Hhccch-HHHHHHHHHHhhHHHHHHHHH--HHH---HHHHhHHHHHHHHHHHHH------HHHHHHHHHHHHhhhcCCcc
Confidence 777666 999999999999999874322 224 677889999999222110 01146666666666554433
No 221
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=93.17 E-value=0.32 Score=51.33 Aligned_cols=75 Identities=15% Similarity=0.027 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHH-HHHHHhhhHHHHHhhhcc--chHHHHHHHHHHhhhhhh
Q 048319 3 ALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSG-LVLVLQLPMQYLVDTIIS--KYWMLVFSSLAYSVGIGL 78 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~-~~~~~pl~gg~lAD~~lG--r~~ti~~~~~i~~~G~~l 78 (348)
+.-+++-++++++ ..+..|+++.+|++..+++.+...... ...+..+++|++.||+ + .++.+.++.++.+++.++
T Consensus 337 l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 337 LAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHHHHHHHH
Confidence 4567788999999 999999999999999999999887664 4567889999999995 5 567777777777776544
No 222
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=93.13 E-value=2.6 Score=41.92 Aligned_cols=157 Identities=14% Similarity=0.124 Sum_probs=90.1
Q ss_pred HHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCC
Q 048319 17 TMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSE 96 (348)
Q Consensus 17 ~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~ 96 (348)
....|+++.-|.+....+.+.+.-...=...=.+.+++--| +|-++.+.++.+.+.+=..+....+.|.
T Consensus 229 f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~vR~~l~a~~~~~~---------- 297 (400)
T PF03825_consen 229 FFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAVRWLLYAYFSDPW---------- 297 (400)
T ss_pred HHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhcCCc----------
Confidence 34556665333555555443332222112222355667777 4889999999999998877776653221
Q ss_pred CCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-hhcchhhcccc--
Q 048319 97 YKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-VAAIIPISYIK-- 173 (348)
Q Consensus 97 ~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-~~~~~~~~yi~-- 173 (348)
.........+..+=++..|.+-+....++.++.+++.. .+- +..|+-.++++- .++..+.+++-
T Consensus 298 -------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~---at~---Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 298 -------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELR---ATA---QGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred -------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccch---HHH---HHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 00112223333445666666666666666666654431 123 556665555555 66666666552
Q ss_pred -------cchhhHHHHHHHHHHHHHHHHhcC
Q 048319 174 -------PWNLRFGVSAICTVIATLLFLSGT 197 (348)
Q Consensus 174 -------g~~~~F~i~~~~~~i~~~vf~~g~ 197 (348)
.|...|.++++..++..++|+...
T Consensus 365 ~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 365 FGARGMFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred hcchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 466778888888888888777653
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=93.08 E-value=1.1 Score=44.48 Aligned_cols=143 Identities=16% Similarity=0.100 Sum_probs=97.1
Q ss_pred HHHHhH-----HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC
Q 048319 10 LAQFVM-----WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP 84 (348)
Q Consensus 10 ~a~yg~-----~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~ 84 (348)
|-|.|. +-+++|+.+..|.+..+|+..++.+.+...+.-.+|.++-.| +-..|.+.+.+++..+=++...++.
T Consensus 246 FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~ill~~~~~l~~- 323 (422)
T COG0738 246 FLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAILLLLAVALIG- 323 (422)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 445555 347788888899999999999999999999998888888775 5777777776655443333333221
Q ss_pred CccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhh
Q 048319 85 PVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVA 164 (348)
Q Consensus 85 p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~ 164 (348)
+ ..-..++.++++-.+.+-|++.+..-+.+++++. . .+.+ .++-.+
T Consensus 324 -------------------g---~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~---~s~~----l~maiv 369 (422)
T COG0738 324 -------------------G---VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----V---GSGL----LVMAIV 369 (422)
T ss_pred -------------------C---hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----c---ccee----eeehee
Confidence 1 2334567789999999999999999999885543 2 2222 223366
Q ss_pred cchhhcccc-------cchhhHH-HHHHHHHH
Q 048319 165 AIIPISYIK-------PWNLRFG-VSAICTVI 188 (348)
Q Consensus 165 ~~~~~~yi~-------g~~~~F~-i~~~~~~i 188 (348)
|+.+++++| |-...+. +|..+.+.
T Consensus 370 GGAiiP~l~G~i~d~~g~~~~~~~~pllc~ly 401 (422)
T COG0738 370 GGAIIPPLQGVIADMFGIQLTFLIVPLLCYLY 401 (422)
T ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 777777777 4444444 56555543
No 224
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=92.77 E-value=1.6 Score=44.56 Aligned_cols=124 Identities=11% Similarity=0.027 Sum_probs=74.9
Q ss_pred HHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHH
Q 048319 52 QYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEF 131 (348)
Q Consensus 52 g~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~ 131 (348)
+.+.|| ++..+.+.+|.++..+|.+++.....- + .++ ...+...+.....+.++|.+.+.|...++
T Consensus 341 ~~l~~r-~~~~~~~~~G~~l~~l~f~~l~~~~~~---~--~~~--------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~ 406 (500)
T PRK09584 341 NKMGDR-LPMPHKFAIGMVLCSGAFLVLPLGAKF---A--NDA--------GIVSVNWLIASYGLQSIGELMISGLGLAM 406 (500)
T ss_pred HHhCcC-CCcHHHHHHHHHHHHHHHHHHHHHHHh---c--CCC--------CccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 344555 466788899999999998887765320 0 011 11234567778889999999999999999
Q ss_pred HHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhc-----c------cc--cchhhHHHHHHHHHHHHHHHHh
Q 048319 132 AEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPIS-----Y------IK--PWNLRFGVSAICTVIATLLFLS 195 (348)
Q Consensus 132 ~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~-----y------i~--g~~~~F~i~~~~~~i~~~vf~~ 195 (348)
..+.-++ + .| .+....|+++.- .++..+.. - .. ++...|..-++..++..++++.
T Consensus 407 ~~~~aP~----~--~r---g~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 407 VAQLVPQ----R--LM---GFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHhCcH----H--HH---HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8866443 2 23 556665554332 33322221 1 11 4778888766665544444444
Q ss_pred cCc
Q 048319 196 GTC 198 (348)
Q Consensus 196 g~~ 198 (348)
-+|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 333
No 225
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=92.71 E-value=0.92 Score=35.08 Aligned_cols=71 Identities=13% Similarity=0.000 Sum_probs=50.7
Q ss_pred HHHHHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 8 DCLAQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 8 Er~a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
-||+|= .+...+.++.+++.++++.+.+..-..-.+..+..+++.++ ..+++.+..+.++..+....+.++
T Consensus 7 gRFayT---plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 7 GRFAYT---PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHH---hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 477775 45556678999999999988887555555555566666666 366777888888877777776664
No 226
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=92.68 E-value=1.5 Score=44.73 Aligned_cols=56 Identities=18% Similarity=0.185 Sum_probs=40.4
Q ss_pred hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 26 WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 26 l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.|.+... ............+..+++.++-||+ |||+.++.|...+.++.+++...-
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHHHHHHHHHHHHH
Confidence 4454332 3333333445566667779999995 999999999999999999888653
No 227
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.65 E-value=0.0072 Score=57.29 Aligned_cols=90 Identities=11% Similarity=-0.012 Sum_probs=71.3
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCS 95 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~ 95 (348)
+-|.+|+...++...++-+.+++.|+-=...+|.+|||+-||.+|-|+.-.+-+.+..+|+++.+.....
T Consensus 64 ~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~---------- 133 (459)
T KOG4686|consen 64 GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGIS---------- 133 (459)
T ss_pred hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHH----------
Confidence 5577888888888888999999999888889999999999999999988888888889999998865320
Q ss_pred CCCCcccccchhHHHHHHHHHHHHhcccC
Q 048319 96 EYKPECIVKGHKILFYAALGLLAFASSSC 124 (348)
Q Consensus 96 ~~~~~c~~~~~~~~~~~~L~liaiG~G~~ 124 (348)
...+....|-++.++|.-..
T Consensus 134 ---------~aFw~M~~GRF~FGIGgESl 153 (459)
T KOG4686|consen 134 ---------HAFWTMLAGRFLFGIGGESL 153 (459)
T ss_pred ---------HHHHHHHhhheeeccCchhh
Confidence 12455666777776665443
No 228
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=91.23 E-value=3 Score=42.40 Aligned_cols=157 Identities=18% Similarity=0.123 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhH-H---HHHHHhhhhhCCchHHHHHH-HHHH----HHHHHHHhhhHHHHHhhhccchHHHHHHHHHHh
Q 048319 3 ALLWADCLAQFVM-W---TMMEYLTEVWKISVVHAAGI-VNIF----SGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYS 73 (348)
Q Consensus 3 ~~e~~Er~a~yg~-~---~L~~Yl~~~l~~~~~~A~~i-~~~~----~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~ 73 (348)
.+.+++.|+++-. . +...+.....+.+....+.. .+.. .....+...+-|.++|+| ||+..+.+..+...
T Consensus 25 ~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~ 103 (463)
T KOG2816|consen 25 PLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTI 103 (463)
T ss_pred HHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHH
Confidence 3567777777644 3 33344433334333333222 2222 235566666778999996 99999999988888
Q ss_pred hhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhH
Q 048319 74 VGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREF 153 (348)
Q Consensus 74 ~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~ 153 (348)
++-+.+.+.. ..+++ +.+ ..|++-...+.--+++-|....++|. ..
T Consensus 104 l~~~~~~~~~------------------------~~~~~---~~~-l~g~~~~~~s~~~a~vadis~~~~R~------~~ 149 (463)
T KOG2816|consen 104 LPALCLLFQG------------------------YWFFL---LLG-LSGGFSAIFSVGFAYVADISSEEERS------SS 149 (463)
T ss_pred HhHHHHHHHH------------------------HHHhh---hcc-cccchhhhhhhhhhheeeccchhHHH------HH
Confidence 8777666531 11111 222 22333333333334444444443322 22
Q ss_pred HHHHHHHHh---hhcchhhcccc---cchhhHHHHHHHHHHHHHHHH
Q 048319 154 FKLLLFMVP---VAAIIPISYIK---PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 154 f~~~y~~in---~~~~~~~~yi~---g~~~~F~i~~~~~~i~~~vf~ 194 (348)
+..-.-+.- .+++....++- |+...|.++++..+++.+--+
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~ 196 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYML 196 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh
Confidence 222111111 44444444443 888999999888887765433
No 229
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.23 E-value=0.15 Score=48.23 Aligned_cols=166 Identities=13% Similarity=0.056 Sum_probs=89.9
Q ss_pred HhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCc
Q 048319 21 YLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPE 100 (348)
Q Consensus 21 Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~ 100 (348)
|+....|+...+-+.+.-+=.|-+.++-.+.|-++|+ .||+|+.+.-++.|.+..+ +-.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiLsCi----TKh---------------- 120 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYILSCI----TKH---------------- 120 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHHHHH----hhc----------------
Confidence 4445678888888777766566677777788899999 6999998888888776532 221
Q ss_pred ccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh---hhhhhhhhhhHHHHHHHHHh--------hhcchhh
Q 048319 101 CIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE---HISLSLIQREFFKLLLFMVP--------VAAIIPI 169 (348)
Q Consensus 101 c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~---e~~~~~~~~~~f~~~y~~in--------~~~~~~~ 169 (348)
+.+.-++.+|-.+=++.+... -++|=+-...|+..+ |.+=. ..-|+---+..| +++-.++
T Consensus 121 ---SpqYkVLmVGR~LGGiaTsLL---FSaFEsWliaEHnekr~FeqqWl---s~TFskA~ffgNglvAiiaGlfgn~lv 191 (454)
T KOG4332|consen 121 ---SPQYKVLMVGRVLGGIATSLL---FSAFESWLIAEHNEKRGFEQQWL---SVTFSKAVFFGNGLVAIIAGLFGNLLV 191 (454)
T ss_pred ---CCceEEEeehhhhhhHHHHHH---HHHHHHHHHHHhhhccCChHhhh---hHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 112333444444433333322 123333333333211 10001 333444344455 2333334
Q ss_pred cccc-cchhhHHHHHHHHHHHHHHHHhcCcccccCCCCCCchhHHHHH
Q 048319 170 SYIK-PWNLRFGVSAICTVIATLLFLSGTCTYENKEPEGSPLTSVFRV 216 (348)
Q Consensus 170 ~yi~-g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p~gs~l~~~~~V 216 (348)
.++. |-...|--+++..+++..+.+.....=..+|.+...+.+-++.
T Consensus 192 d~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~g 239 (454)
T KOG4332|consen 192 DTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKG 239 (454)
T ss_pred HHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhH
Confidence 4444 7778888888888888776664333222233333445554443
No 230
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=90.33 E-value=1.6 Score=43.31 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=28.8
Q ss_pred HhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 47 LQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 47 ~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
.-++.+++-|+ +||++|+....++..+-++++..
T Consensus 397 GlLIt~~iver-lGRKkTMal~l~~f~iflfll~~ 430 (528)
T KOG0253|consen 397 GLLITGVIVER-LGRKKTMALSLILFGIFLFLLTT 430 (528)
T ss_pred chhHHHHHHHH-hcchhHHHHHHHHHHHHHHHHHH
Confidence 44789999999 89999999999988877766654
No 231
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=89.75 E-value=1.6 Score=44.16 Aligned_cols=126 Identities=7% Similarity=-0.099 Sum_probs=76.4
Q ss_pred hhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC-CccCCCCCCCCCCCCccc
Q 048319 24 EVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP-PVLAGFVGTCSEYKPECI 102 (348)
Q Consensus 24 ~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~-p~~~~~~~~c~~~~~~c~ 102 (348)
+.+|+++...+.+.........+...+.+.+.++ +|.++++.++.+++.++.....+... ..... ..
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~---gi-------- 348 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTLSSLFDLILVKRWNLAF---GI-------- 348 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHhCceeeeecccccc---CC--------
Confidence 4689999999988888776666666666666655 68999999999999988766432111 10000 00
Q ss_pred ccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhccc
Q 048319 103 VKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYI 172 (348)
Q Consensus 103 ~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi 172 (348)
...........+..++.|..-.....+..+.-+++. + ...|..+....| .++....+++
T Consensus 349 --~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------e---gt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 349 --SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------E---SSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred --CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------e---ehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122233445566666655556677776555432 2 567777777667 5555544444
No 232
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=89.08 E-value=0.013 Score=58.22 Aligned_cols=57 Identities=18% Similarity=0.102 Sum_probs=38.4
Q ss_pred HhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh
Q 048319 21 YLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT 80 (348)
Q Consensus 21 Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~ 80 (348)
++.+..+.+.. ............+..+++.++.|+ +|||+.++++.++..+..+.+.
T Consensus 278 ~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 278 SIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAICSLILG 334 (451)
T ss_pred ccccccccccc--cccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 33445566665 111222233455677778899999 6999999999988888777765
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=87.93 E-value=9.4 Score=38.06 Aligned_cols=162 Identities=10% Similarity=-0.005 Sum_probs=82.4
Q ss_pred hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHH--HHHHHHHHhhhhhhhhcccC--Cc-cCCCCCCC
Q 048319 23 TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWM--LVFSSLAYSVGIGLLTMSTP--PV-LAGFVGTC 94 (348)
Q Consensus 23 ~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~t--i~~~~~i~~~G~~ll~~s~~--p~-~~~~~~~c 94 (348)
..+|+.+..-.+..+..-.....+= ..-|+.+|++ +|.||| |+.|..+...|..+...... .. ..+ .
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap~R-~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~--~-- 81 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAPLR-VWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ--S-- 81 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHH-HHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccc--c--
Confidence 3467777766666666655555443 3456889985 455665 66788888877666554433 11 000 0
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh-hhcchhhc-cc
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP-VAAIIPIS-YI 172 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in-~~~~~~~~-yi 172 (348)
+. +.........++..++++|.+.......++.+|.-+|++ |.| --..-|.-+..- .++.++.+ ++
T Consensus 82 ~~-----~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~----R~~---~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 82 SG-----PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER----RPR---VVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred cc-----ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh----hhh---hHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00 011112233444555666666666667777776555432 223 333444444333 44444444 23
Q ss_pred cc------chhhHHHHHHHHHHHHHHHHhcCcccc
Q 048319 173 KP------WNLRFGVSAICTVIATLLFLSGTCTYE 201 (348)
Q Consensus 173 ~g------~~~~F~i~~~~~~i~~~vf~~g~~~y~ 201 (348)
.. ++..-.++.+.+++.++-.+--.+++.
T Consensus 150 ~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~ 184 (403)
T PF03209_consen 150 DPFSPERLIQVIQGVALIALLLNLIALWGQEPRRS 184 (403)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 32 222333455555555554444444444
No 234
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=87.16 E-value=1.5 Score=41.78 Aligned_cols=36 Identities=22% Similarity=0.157 Sum_probs=31.3
Q ss_pred chhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccc
Q 048319 105 GHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAI 140 (348)
Q Consensus 105 ~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~ 140 (348)
.+...+.+++.+++.|.+...+..++++++.-++++
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~ 43 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET 43 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch
Confidence 357889999999999999999999999998776543
No 235
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=85.69 E-value=2 Score=44.31 Aligned_cols=64 Identities=16% Similarity=0.151 Sum_probs=49.8
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
..|.+|.. .||++.++.+.++..--....+.+.+.|++|||| =++|-+++|+.+..++..++..
T Consensus 32 pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 32 PLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred hHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHhee
Confidence 45566664 6999999999999999999999999999999997 5666666666655555544444
No 236
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=84.42 E-value=28 Score=35.46 Aligned_cols=39 Identities=15% Similarity=0.036 Sum_probs=22.0
Q ss_pred HHHHHHhhhHHHHHhhhccchHHHHH-HHHHHhhhhhhhhc
Q 048319 42 GLVLVLQLPMQYLVDTIISKYWMLVF-SSLAYSVGIGLLTM 81 (348)
Q Consensus 42 ~~~~~~pl~gg~lAD~~lGr~~ti~~-~~~i~~~G~~ll~~ 81 (348)
...-++.++-|-+||.. |+||-++. +..+..+...++..
T Consensus 81 l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~ 120 (477)
T PF11700_consen 81 LLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWF 120 (477)
T ss_pred HHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 33444444556789985 66665555 44555555555554
No 237
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=80.94 E-value=3.4 Score=41.81 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=92.9
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh---ccchHHHH-HHHHHHhhhhhhhhcccC--CccCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI---ISKYWMLV-FSSLAYSVGIGLLTMSTP--PVLAG 89 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~---lGr~~ti~-~~~~i~~~G~~ll~~s~~--p~~~~ 89 (348)
+.+..|++ .+|.+..-.+.+-..--....+...+-|..+||. +||||-.+ .+++...++++++..++- +.+-+
T Consensus 53 sy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd 131 (498)
T KOG0637|consen 53 SYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGD 131 (498)
T ss_pred ccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcC
Confidence 44555665 4788877776666555555666667778999986 78877654 566777777776655432 22211
Q ss_pred CCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhh
Q 048319 90 FVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPI 169 (348)
Q Consensus 90 ~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~ 169 (348)
+ ...|.......++.+|..++=+.+-..+...-++.+|...+++.++| - .++|..|--..|.++...-
T Consensus 132 ------~-~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~--A---ns~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 132 ------N-ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR--A---NSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred ------C-cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc--c---chhHHHHHHhcceeeeecc
Confidence 1 11111234466788888888888888888888999999887764332 2 5666655555556665555
Q ss_pred cccc
Q 048319 170 SYIK 173 (348)
Q Consensus 170 ~yi~ 173 (348)
+|..
T Consensus 200 ~y~~ 203 (498)
T KOG0637|consen 200 SYLG 203 (498)
T ss_pred cccC
Confidence 5654
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=80.68 E-value=13 Score=31.93 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=49.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHH
Q 048319 30 VVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKIL 109 (348)
Q Consensus 30 ~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~ 109 (348)
....+.++..+...+.+. ..+-++ +|.|+++++|.+.|.+=..... .| +...
T Consensus 40 ~~slai~Y~~~~~s~l~~----P~iv~~-lg~K~sm~lg~~~y~~y~~~~~-------~~----------------~~~~ 91 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFA----PSIVNK-LGPKWSMILGSLGYAIYIASFF-------YP----------------NSYT 91 (156)
T ss_pred HHHHHHHHHHHHHHHHhH----HHHHHH-HhhHHHHHHHHHHHHHHHHHHH-------hh----------------hHHH
Confidence 334444445554444444 455555 7999999999988875333221 11 3467
Q ss_pred HHHHHHHHHHhcccCCcchhHHHH
Q 048319 110 FYAALGLLAFASSSCSVESTEFAE 133 (348)
Q Consensus 110 ~~~~L~liaiG~G~~k~~v~~~~a 133 (348)
++.+=.+.++|.+.+......+..
T Consensus 92 l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 92 LYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHhhhhHHhhHhhhHHHH
Confidence 788888999999998887776665
No 239
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=78.57 E-value=40 Score=33.78 Aligned_cols=146 Identities=13% Similarity=0.121 Sum_probs=85.9
Q ss_pred HHHHHhhhh-hCCchHHHHHHHHHHHHHHHHHhh-hHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCC
Q 048319 17 TMMEYLTEV-WKISVVHAAGIVNIFSGLVLVLQL-PMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTC 94 (348)
Q Consensus 17 ~L~~Yl~~~-l~~~~~~A~~i~~~~~~~~~~~pl-~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c 94 (348)
.++.|++++ -|++..+-++-+.-...-+|+.-+ +...+.|. +|.+..|+++++.+.+-..+|.....
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~s---------- 93 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGTS---------- 93 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHCc----------
Confidence 377899887 899998887766655555666554 45667777 78888888888888887777766421
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh----hhcchhhc
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP----VAAIIPIS 170 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in----~~~~~~~~ 170 (348)
....-+.=++-|++ .++-.++-+.-|..-|+++=++- .++-.--.+... ++|.+.++
T Consensus 94 ------------v~~mq~~q~~yg~~----~a~evay~sYiys~v~~~~yq~v---ts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 94 ------------VLAMQLMQFFYGLA----TAAEVAYYSYIYSVVDKEHYQKV---TSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred ------------HHHHHHHHHHHHHH----HHHHHHHHHHheeecCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222 33445666777777665432211 222222222222 44444333
Q ss_pred ccc-cchhhHHHHHHHHHHHHHH
Q 048319 171 YIK-PWNLRFGVSAICTVIATLL 192 (348)
Q Consensus 171 yi~-g~~~~F~i~~~~~~i~~~v 192 (348)
.-. ++...+.++...+.+++++
T Consensus 155 ~~~~sy~~L~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 155 FGGVSYFQLNYISLASVSLALLI 177 (412)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHH
Confidence 322 6777777777777777655
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=77.30 E-value=50 Score=33.76 Aligned_cols=142 Identities=10% Similarity=-0.057 Sum_probs=69.3
Q ss_pred HHhhhHHHHHhhhccc-hHHHHHHHHHHhhhhhhhhcccC-Cc-cCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcc
Q 048319 46 VLQLPMQYLVDTIISK-YWMLVFSSLAYSVGIGLLTMSTP-PV-LAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASS 122 (348)
Q Consensus 46 ~~pl~gg~lAD~~lGr-~~ti~~~~~i~~~G~~ll~~s~~-p~-~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G 122 (348)
+..++=-.+.++ +|+ +++-.++.++..+|++...+.+. +. .++ .+-.+ ..--++...+...++...++++..+
T Consensus 320 i~s~~l~~l~~~-~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 320 ITSIGMEKLCRG-WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDG-ESLPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred HHHHHHHHHHHH-hccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc--ccccc-cccCcchhhHHHHHHHHHHhhHHHH
Confidence 333344456666 685 55557787888888777764332 10 000 00000 0000011112344444455666666
Q ss_pred cCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcc-c---c-cchhhHHHHHHHHHHHHHHHH
Q 048319 123 SCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISY-I---K-PWNLRFGVSAICTVIATLLFL 194 (348)
Q Consensus 123 ~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~y-i---~-g~~~~F~i~~~~~~i~~~vf~ 194 (348)
..-..=.++.++..++++. +. .-+...+..++. .+..+..+. . . +-...|.+.++.++++.+.-+
T Consensus 396 ~~~siPfal~s~~~~~~~~----~~---G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 396 ITYSIPFALASIRSSNLGA----GQ---GLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HHHHHhHHHHHHHccccCC----CC---cchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 6555555667765553221 12 333344444444 222222222 2 2 566788889998888876555
Q ss_pred hcCc
Q 048319 195 SGTC 198 (348)
Q Consensus 195 ~g~~ 198 (348)
..-|
T Consensus 469 ~~~~ 472 (477)
T TIGR01301 469 ILLP 472 (477)
T ss_pred HhCC
Confidence 4433
No 241
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=76.95 E-value=19 Score=36.70 Aligned_cols=113 Identities=14% Similarity=0.174 Sum_probs=86.0
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
+.+|+..++++++.+-+......+...++..++..-+=-+.+|-++.+..|.....++..+..+...
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~------------- 330 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE------------- 330 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc-------------
Confidence 3356666899999999999999999999999988855555589999999999999999998887632
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP 162 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in 162 (348)
.+..|.+. .++...+...|.+.++...+.+.++ + ...+.|....-+
T Consensus 331 ---------~w~~~~~~-v~~~~~~~~~pa~~s~~s~~v~~~e------~---g~v~~~is~i~~ 376 (463)
T KOG2816|consen 331 ---------TWMMFAAG-VVVALAGIVFPAIRAFASILVSPEE------Q---GKVFGIISGIEG 376 (463)
T ss_pred ---------chhhhHHH-HHHHhhcchhHHHHhHHHhhccccc------c---cchhhHHHHHHH
Confidence 23444444 4455668888999999998777553 2 456777666655
No 242
>PRK03612 spermidine synthase; Provisional
Probab=75.21 E-value=42 Score=34.61 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=34.1
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccch
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKY 62 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~ 62 (348)
..++-.+...+|-+...-+.++++|.+..-+...++++++++-.-++
T Consensus 35 v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~ 81 (521)
T PRK03612 35 LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF 81 (521)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 33444555567888888899999998888888888888875544333
No 243
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=74.16 E-value=87 Score=31.60 Aligned_cols=106 Identities=13% Similarity=-0.008 Sum_probs=66.1
Q ss_pred HHHHHHhhhhhCC---chHHHHHHH----HHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccC
Q 048319 16 WTMMEYLTEVWKI---SVVHAAGIV----NIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLA 88 (348)
Q Consensus 16 ~~L~~Yl~~~l~~---~~~~A~~i~----~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~ 88 (348)
..+-+|+++..+- +.++++... ++-.-+.-++..+=|-+||..==||+.+-++..+..+...+|+...
T Consensus 36 ~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~----- 110 (438)
T COG2270 36 FIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP----- 110 (438)
T ss_pred ehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC-----
Confidence 4466788876655 444443333 2333333444455568899975556666777777777777777641
Q ss_pred CCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccc
Q 048319 89 GFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAI 140 (348)
Q Consensus 89 ~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~ 140 (348)
++.++....+-+.+..++..+-...-.+|.-|..++++
T Consensus 111 --------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 111 --------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred --------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 11234455555566778888888888888887776654
No 244
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=67.19 E-value=24 Score=35.42 Aligned_cols=91 Identities=7% Similarity=-0.045 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHh---hhcchhhcccc---cchhhHH
Q 048319 107 KILFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVP---VAAIIPISYIK---PWNLRFG 180 (348)
Q Consensus 107 ~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in---~~~~~~~~yi~---g~~~~F~ 180 (348)
+..+.+-...+++|.|..-...-|..+...|..+.++-..- .+.+.++=.+.. .+|+++.+.+- ||.|.=.
T Consensus 361 ~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vY---GsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ 437 (464)
T KOG3764|consen 361 IAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVY---GSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMT 437 (464)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhcccccee---eeHHHHHHHHHHHhhhccccccchheeehhHHHHHH
Confidence 44455666667777777888888888888886543211111 233333322222 66777766553 8887655
Q ss_pred HHHHHHHHHHHHHHhcCccc
Q 048319 181 VSAICTVIATLLFLSGTCTY 200 (348)
Q Consensus 181 i~~~~~~i~~~vf~~g~~~y 200 (348)
+-++..++..-++...+..|
T Consensus 438 iig~~n~iyapvl~ll~~v~ 457 (464)
T KOG3764|consen 438 IIGILNLIYAPVLLLLRIVY 457 (464)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 54544444444444444444
No 245
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=66.74 E-value=57 Score=31.30 Aligned_cols=74 Identities=7% Similarity=0.014 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhcccCCcchhHHHHHhhhccchhhhhhhhhhhhHHHHHHHHHhhhcchhhcccc------cchhhHHHH
Q 048319 109 LFYAALGLLAFASSSCSVESTEFAEEQLEIAINEHISLSLIQREFFKLLLFMVPVAAIIPISYIK------PWNLRFGVS 182 (348)
Q Consensus 109 ~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~e~~~~~~~~~~f~~~y~~in~~~~~~~~yi~------g~~~~F~i~ 182 (348)
.-++|..++-...|.+.|.+. +.-.||-+++. | ....|||-.=.|.+..++.--.+ +=+.-|++|
T Consensus 346 ~s~i~F~~~E~cvGlfwPSim-kmRsqyIPEea-----r---stimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~ic 416 (454)
T KOG4332|consen 346 ESLIGFCLFEACVGLFWPSIM-KMRSQYIPEEA-----R---STIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGIC 416 (454)
T ss_pred HHHHHHHHHHHHHhhcchHHH-HHHHhhCCHHH-----H---hhhhhheechhhHhhhhhheecccccCccccchhhhhh
Confidence 346777788888899999986 45666654332 4 77899999988833332222223 444668898
Q ss_pred HHHHHHHHH
Q 048319 183 AICTVIATL 191 (348)
Q Consensus 183 ~~~~~i~~~ 191 (348)
.+.+.++.+
T Consensus 417 S~~~~~a~i 425 (454)
T KOG4332|consen 417 SAFLFVASI 425 (454)
T ss_pred HHHHHHHHH
Confidence 888887765
No 246
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=61.50 E-value=51 Score=33.53 Aligned_cols=57 Identities=19% Similarity=0.002 Sum_probs=41.7
Q ss_pred hhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhh-hhhhhc
Q 048319 25 VWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVG-IGLLTM 81 (348)
Q Consensus 25 ~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G-~~ll~~ 81 (348)
.-|++...|+.+...-...+.+..++.|.++||.=.-++++++......++ +.++..
T Consensus 295 ~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~ 352 (480)
T KOG2563|consen 295 PSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC 352 (480)
T ss_pred cccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 347888888888888888999999999999999644445555555555555 444443
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.94 E-value=1.2e+02 Score=31.01 Aligned_cols=56 Identities=20% Similarity=0.225 Sum_probs=38.7
Q ss_pred HHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCC
Q 048319 46 VLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCS 125 (348)
Q Consensus 46 ~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k 125 (348)
+..++++-+-|. +|.|+++.+++..|..=.+-+.. | +...+|.+=.++++|.+...
T Consensus 65 v~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~-------~----------------N~y~~yfssallG~Gaallw 120 (461)
T KOG3098|consen 65 VSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF-------P----------------NSYYLYFSSALLGFGAALLW 120 (461)
T ss_pred HHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh-------c----------------chHHHHHHHHHhhhhHHhee
Confidence 345566678888 69999999999887764333221 1 23567777788888888544
No 248
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=54.39 E-value=71 Score=33.70 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhH-HHHHHHhhhhhCCchH---HHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHH-HHHHHHHhhhhhh
Q 048319 4 LLWADCLAQFVM-WTMMEYLTEVWKISVV---HAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWML-VFSSLAYSVGIGL 78 (348)
Q Consensus 4 ~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~---~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti-~~~~~i~~~G~~l 78 (348)
+-+.+-.-||++ ........+.++-+.. .++.+...+.....+..++.|++.- ++||.|-. ++++.++.++..+
T Consensus 318 i~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~-~ir~~Kw~li~~~~~~ta~~Ga 396 (599)
T PF06609_consen 318 ISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFS-KIRHIKWQLIFGSVLMTAFCGA 396 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHH-HccchhHHHHHHHHHHHHHHHH
Confidence 445566667766 4444444444444432 3444444444445555555666664 46886665 4677777777676
Q ss_pred hhcc
Q 048319 79 LTMS 82 (348)
Q Consensus 79 l~~s 82 (348)
++..
T Consensus 397 ma~~ 400 (599)
T PF06609_consen 397 MAAV 400 (599)
T ss_pred HHHc
Confidence 6543
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=54.08 E-value=1e+02 Score=30.98 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=64.2
Q ss_pred hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhh-cccCCccCCCCCCCCCCCCcc
Q 048319 23 TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLT-MSTPPVLAGFVGTCSEYKPEC 101 (348)
Q Consensus 23 ~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~-~s~~p~~~~~~~~c~~~~~~c 101 (348)
.+.+|++..+-+.+...-+.+.-+..+.=+-..|++.|.-+..+.-.....+-++++. ...
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~------------------ 350 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR------------------ 350 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc------------------
Confidence 3578999999888777655555555555555678877776666665555555444332 221
Q ss_pred cccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhc
Q 048319 102 IVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEI 138 (348)
Q Consensus 102 ~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~ 138 (348)
....++.++.+-++.+....+|+..+...-.+.
T Consensus 351 ----~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~ 383 (451)
T KOG2615|consen 351 ----TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQ 383 (451)
T ss_pred ----cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCc
Confidence 135788999999999999999999888755443
No 250
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=50.06 E-value=41 Score=36.20 Aligned_cols=75 Identities=13% Similarity=0.016 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHHH-HHHHhhhHHHHHhhh-ccchHHHHHHHHHHhhhh
Q 048319 2 AALLWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSGL-VLVLQLPMQYLVDTI-ISKYWMLVFSSLAYSVGI 76 (348)
Q Consensus 2 ~~~e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~~-~~~~pl~gg~lAD~~-lGr~~ti~~~~~i~~~G~ 76 (348)
.+...+|-+++-|. +.+-=||..++|.++..|+.+.+.+... .-+.-++||++--++ +.-+.+..+..+...+.+
T Consensus 398 ~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 398 VLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 35678999999999 9999999999999999999999776654 445557899998776 666666665554444433
No 251
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=49.16 E-value=2.9e+02 Score=27.72 Aligned_cols=66 Identities=12% Similarity=0.179 Sum_probs=39.6
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHh----hhHHHHHhhhccchHHHHHHHHHHhhhhhhhhccc
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQ----LPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMST 83 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~p----l~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~ 83 (348)
.-..+|.+..+ -++.+++.+++.-....-+.- .+..++-+| +|.|+.++++..++.+=.++..++.
T Consensus 241 qqf~~y~~~~f-~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i~~iRi~~~~~~~ 310 (412)
T PF01306_consen 241 QQFPIYFASFF-QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVIMAIRIIGSGFAT 310 (412)
T ss_dssp HHHHHHHHHTS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHh-cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHHHHHHHHHHhhhc
Confidence 44566666432 344455555544443333333 345667777 6999999999999998877766653
No 252
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=48.88 E-value=79 Score=32.31 Aligned_cols=36 Identities=8% Similarity=-0.163 Sum_probs=30.3
Q ss_pred hhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhh
Q 048319 23 TEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTI 58 (348)
Q Consensus 23 ~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~ 58 (348)
++-.|.+..+......++.+...+..++||.++|++
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 334467888888888999999999999999999994
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.96 E-value=4.1e+02 Score=27.12 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=50.9
Q ss_pred hhhHHHHHhhh--ccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCC
Q 048319 48 QLPMQYLVDTI--ISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCS 125 (348)
Q Consensus 48 pl~gg~lAD~~--lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k 125 (348)
.++-+.+.+|. +||+.++.++..++.++.++.-++- |...|..+.- + ..-.......+..+-=.+.++|-+...
T Consensus 296 g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~-p~dap~~~t~-~--~~~~~~~~~~~~~ii~~l~G~~D~~~~ 371 (461)
T KOG3098|consen 296 GLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF-PNDAPLRPTD-S--PPLLFTPSYYLALIIGFLLGFGDACFN 371 (461)
T ss_pred HHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc-cccCCCCCCc-c--cccccccchhHHHHHHHHHhhHHHHHH
Confidence 34444554433 6999999999999999887766653 3322210000 0 000011112222222246888999999
Q ss_pred cchhHHHHHhhhc
Q 048319 126 VESTEFAEEQLEI 138 (348)
Q Consensus 126 ~~v~~~~adq~~~ 138 (348)
...+...++.+++
T Consensus 372 t~~~~ii~~~~~~ 384 (461)
T KOG3098|consen 372 TQRYVIIALLYPD 384 (461)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999943
No 254
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=37.82 E-value=1.8e+02 Score=29.26 Aligned_cols=104 Identities=16% Similarity=0.039 Sum_probs=62.2
Q ss_pred HHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccC-CccCCCCCCC
Q 048319 16 WTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTP-PVLAGFVGTC 94 (348)
Q Consensus 16 ~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~-p~~~~~~~~c 94 (348)
..++.|+... |++...-+..-+.=.......+.+..++-+| +|--|+=.++.....+-+.+-..+-. |... .
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~-----~ 351 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWVCLALCVVSFWAPGSP-----F 351 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHHHHHHHHHHHhcCCCC-----c
Confidence 4455565554 6776665555555555566667777777777 59999999988776654433332211 2110 0
Q ss_pred CCCCCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHH
Q 048319 95 SEYKPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEE 134 (348)
Q Consensus 95 ~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~ad 134 (348)
+......++.|+.+-=+|.=++--++.-+.=|
T Consensus 352 --------~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe 383 (432)
T PF06963_consen 352 --------SSISAYLLLGGIALSRIGLWSFDLAVTQIMQE 383 (432)
T ss_pred --------hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcc
Confidence 12345667777777777777776666554444
No 255
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.48 E-value=1e+02 Score=24.96 Aligned_cols=48 Identities=21% Similarity=0.197 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhh
Q 048319 31 VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLL 79 (348)
Q Consensus 31 ~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll 79 (348)
++|-.+.+-|.+...+... -||+-|+|.|-..--++..++...|..++
T Consensus 43 ~~a~klssefIsGilVGa~-iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 43 AQAFKLSSEFISGILVGAG-IGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhHHHHHHHHHHHHHHHH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3444555555555554444 46999999998655444444433333333
No 256
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=34.64 E-value=57 Score=33.48 Aligned_cols=71 Identities=6% Similarity=0.009 Sum_probs=40.1
Q ss_pred HHHHHhH-HHHHHHhhhhhCCchHHHHH-----HHHHHHHHHHHHhh----hHHHHHhhhccchHHHHHHHHHHhhhhhh
Q 048319 9 CLAQFVM-WTMMEYLTEVWKISVVHAAG-----IVNIFSGLVLVLQL----PMQYLVDTIISKYWMLVFSSLAYSVGIGL 78 (348)
Q Consensus 9 r~a~yg~-~~L~~Yl~~~l~~~~~~A~~-----i~~~~~~~~~~~pl----~gg~lAD~~lGr~~ti~~~~~i~~~G~~l 78 (348)
.++||+. .+...-+. .+|+..+++.. +.-......-...+ ++.++.|. +||++..+.|.+++.+-.+.
T Consensus 317 Diafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~~GF~~~~i~~~~ 394 (538)
T KOG0252|consen 317 DIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQLMGFFIMTIFFFV 394 (538)
T ss_pred hhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHHhhHHHHHHHHHH
Confidence 4567776 55544443 34555444443 11111112222223 44556899 79999999999998876655
Q ss_pred hhc
Q 048319 79 LTM 81 (348)
Q Consensus 79 l~~ 81 (348)
+..
T Consensus 395 ~~~ 397 (538)
T KOG0252|consen 395 IAG 397 (538)
T ss_pred HcC
Confidence 544
No 257
>PF14007 YtpI: YtpI-like protein
Probab=32.11 E-value=52 Score=25.63 Aligned_cols=30 Identities=27% Similarity=0.465 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCcccccCCC
Q 048319 176 NLRFGVSAICTVIATLLFLSGTCTYENKEP 205 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf~~g~~~y~~~~p 205 (348)
++.+.|.++.+++++...+.|.+.|++-.|
T Consensus 57 t~~~iV~~ifl~lG~~n~~~G~r~y~hy~p 86 (89)
T PF14007_consen 57 TVRLIVGAIFLVLGLFNLFAGIRAYRHYRP 86 (89)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 467789999999999999999999988765
No 258
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=31.80 E-value=15 Score=37.99 Aligned_cols=74 Identities=18% Similarity=0.069 Sum_probs=0.0
Q ss_pred HHHHHHHHHhH-HHHHHHhhhhhCCchHHHHHHHHHHHH-HHHHHhhhHHHHHhhh-ccchHHHHHHHHHHhhhhhh
Q 048319 5 LWADCLAQFVM-WTMMEYLTEVWKISVVHAAGIVNIFSG-LVLVLQLPMQYLVDTI-ISKYWMLVFSSLAYSVGIGL 78 (348)
Q Consensus 5 e~~Er~a~yg~-~~L~~Yl~~~l~~~~~~A~~i~~~~~~-~~~~~pl~gg~lAD~~-lGr~~ti~~~~~i~~~G~~l 78 (348)
...|-+..-|. +.+--|+..+++++.++|+.+.+.... ..-+..++||++-.|+ ++.++++.+..+..+++.++
T Consensus 314 ~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~ 390 (539)
T PF03137_consen 314 GVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVIL 390 (539)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 45677788888 888899999999999999999877655 5567788999999998 77777777777776666555
No 259
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=31.53 E-value=2.3e+02 Score=27.98 Aligned_cols=57 Identities=11% Similarity=0.262 Sum_probs=37.8
Q ss_pred HHHhHHHHHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhh
Q 048319 11 AQFVMWTMMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSV 74 (348)
Q Consensus 11 a~yg~~~L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~ 74 (348)
+|-|..||+..+.. +++...-.++.-.....+.+.| +-=|++|-|+|+.++...|..
T Consensus 44 a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~-----~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 44 AYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMP-----LLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred HHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHH-----HHHHHHhhHHHHHHHHHHHHH
Confidence 45555788877766 4444444445555544455555 445678999999999888775
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=31.06 E-value=2.5e+02 Score=28.91 Aligned_cols=89 Identities=13% Similarity=0.027 Sum_probs=56.3
Q ss_pred hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccc-hHHHHHHHHHHhhhhhhh-hcccCCccCCCCCCCCCCCCcccc
Q 048319 26 WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISK-YWMLVFSSLAYSVGIGLL-TMSTPPVLAGFVGTCSEYKPECIV 103 (348)
Q Consensus 26 l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr-~~ti~~~~~i~~~G~~ll-~~s~~p~~~~~~~~c~~~~~~c~~ 103 (348)
.+-+.+--+.++++.....-+..+.-|+=.-+. |+ ||=++.|.++.++|+++= .+...|.
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~~~~----------------- 127 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAYVPN----------------- 127 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHhccc-----------------
Confidence 344455556666665555555555555656663 44 788899999999999987 5543331
Q ss_pred cchhHHHHHHHHHHHHhcccCCcchhHHHHH
Q 048319 104 KGHKILFYAALGLLAFASSSCSVESTEFAEE 134 (348)
Q Consensus 104 ~~~~~~~~~~L~liaiG~G~~k~~v~~~~ad 134 (348)
+ ...+..++-.+.++|.|.. .-.=++.+|
T Consensus 128 ~-~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~ 156 (488)
T KOG2325|consen 128 G-VKYLMLVARILTGVGVGNF-AVLRAYIAD 156 (488)
T ss_pred c-hHHHHHHHHHHcCcCcccH-HHHHHHHHh
Confidence 1 4567778888888887754 223344443
No 261
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=30.23 E-value=65 Score=24.20 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=29.0
Q ss_pred hhhcccc-cchhhHHHHHHHHHHHHHHHHhcCcccccCC
Q 048319 167 IPISYIK-PWNLRFGVSAICTVIATLLFLSGTCTYENKE 204 (348)
Q Consensus 167 ~~~~yi~-g~~~~F~i~~~~~~i~~~vf~~g~~~y~~~~ 204 (348)
.+++|+. ++...+.+-++++++++++.+---|.|+++|
T Consensus 25 fi~Gy~~q~~~~~~~~~~~g~~~~~lv~vP~Wp~y~r~p 63 (76)
T PF06645_consen 25 FIVGYITQSFSYTFYIYGAGVVLTLLVVVPPWPFYNRHP 63 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheeCCcHhhcCCc
Confidence 3556665 8888999888888888888887777776443
No 262
>COG3619 Predicted membrane protein [Function unknown]
Probab=25.24 E-value=5.3e+02 Score=23.61 Aligned_cols=21 Identities=0% Similarity=-0.088 Sum_probs=13.7
Q ss_pred HhcccCCcchhHHHHHhhhcc
Q 048319 119 FASSSCSVESTEFAEEQLEIA 139 (348)
Q Consensus 119 iG~G~~k~~v~~~~adq~~~~ 139 (348)
.++-.+.-|+..++.|..+--
T Consensus 140 ~~~t~~TGnl~~~~~~l~~~l 160 (226)
T COG3619 140 YGTTYVTGNLKSAGRGLGRYL 160 (226)
T ss_pred ccchhhhhhHHHHHHHHHHHH
Confidence 344456678888887766643
No 263
>PRK13747 putative mercury resistance protein; Provisional
Probab=24.84 E-value=1.4e+02 Score=22.38 Aligned_cols=51 Identities=10% Similarity=-0.021 Sum_probs=28.8
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHHh-----------hhcchh-hcccc-cchhhHHHHHHHHHHHHH
Q 048319 138 IAINEHISLSLIQREFFKLLLFMVP-----------VAAIIP-ISYIK-PWNLRFGVSAICTVIATL 191 (348)
Q Consensus 138 ~~~~~e~~~~~~~~~~f~~~y~~in-----------~~~~~~-~~yi~-g~~~~F~i~~~~~~i~~~ 191 (348)
|.-|.|.+++ -+.|-|+-.+.= ++++|. -+|+. .|..+++.-+..+++++.
T Consensus 5 e~~p~e~~~~---~~~YlWg~lAvLTCPCHLpiLa~lLAGTa~Gafl~e~w~iaal~lt~LFvlsl~ 68 (78)
T PRK13747 5 ERLPSETHKP---ITGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGIAALTLTGLFVLSVT 68 (78)
T ss_pred ccCChhhcCc---chhhhhHHHHHhcCcchHHHHHHHHccchHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 4456666666 777888766543 333333 33554 777766655555544443
No 264
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=24.71 E-value=2.4e+02 Score=19.31 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=18.9
Q ss_pred HHHHHhhhHHHHHhhhccchHHHHHHHHH
Q 048319 43 LVLVLQLPMQYLVDTIISKYWMLVFSSLA 71 (348)
Q Consensus 43 ~~~~~pl~gg~lAD~~lGr~~ti~~~~~i 71 (348)
...+.....|+..|+++|..+...+..++
T Consensus 12 ~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 12 APILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 34555667788999999995444443333
No 265
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=23.84 E-value=6.2e+02 Score=23.86 Aligned_cols=150 Identities=17% Similarity=0.111 Sum_probs=90.6
Q ss_pred HHHHhhhhhCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCC
Q 048319 18 MMEYLTEVWKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEY 97 (348)
Q Consensus 18 L~~Yl~~~l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~ 97 (348)
++.|+..+-.++....+.+.+..+|...-.-=.+-+.|=+++|-=||.=++.-...+|..+..+... ++ ..
T Consensus 28 lv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~f---gE----W~-- 98 (269)
T PF06800_consen 28 LVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFF---GE----WT-- 98 (269)
T ss_pred HHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhc---CC----CC--
Confidence 4556655555555456677777888888777788888999999999999999999999888775433 11 10
Q ss_pred CCcccccchhHHHHHHHHHHHHhcccCCcchhHHHHHhhhccchh---hhhhh----hhhhhHHHHHHHHHh-hhcchhh
Q 048319 98 KPECIVKGHKILFYAALGLLAFASSSCSVESTEFAEEQLEIAINE---HISLS----LIQREFFKLLLFMVP-VAAIIPI 169 (348)
Q Consensus 98 ~~~c~~~~~~~~~~~~L~liaiG~G~~k~~v~~~~adq~~~~~~~---e~~~~----~~~~~~f~~~y~~in-~~~~~~~ 169 (348)
+..++..-..++.++.+|.-. .+-+-++++.. +..+| +.+....-|.|..++ ....
T Consensus 99 -----~~~~~~~G~~Al~liiiGv~l--------ts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~~--- 162 (269)
T PF06800_consen 99 -----TTTQKIIGFLALVLIIIGVIL--------TSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAFHV--- 162 (269)
T ss_pred -----CcchHHHHHHHHHHHHHHHHH--------hccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 123455556677777776432 12222222211 11111 114566667777665 3211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhc
Q 048319 170 SYIKPWNLRFGVSAICTVIATLLFLSG 196 (348)
Q Consensus 170 ~yi~g~~~~F~i~~~~~~i~~~vf~~g 196 (348)
.+| -.|+--++.|+++.+++..-
T Consensus 163 ---~~~-~~~lPqaiGm~i~a~i~~~~ 185 (269)
T PF06800_consen 163 ---SGW-SAFLPQAIGMLIGAFIFNLF 185 (269)
T ss_pred ---Chh-HhHHHHHHHHHHHHHHHhhc
Confidence 143 34555678888888777663
No 266
>PF11027 DUF2615: Protein of unknown function (DUF2615); InterPro: IPR020309 This entry represents a group of uncharacterised protein from the Metazoa, including CD034 (or C4orf34) and YQF4 (or C34C12.4).
Probab=23.53 E-value=1.2e+02 Score=24.40 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCcccccC
Q 048319 176 NLRFGVSAICTVIATLLFLSGTCTYENK 203 (348)
Q Consensus 176 ~~~F~i~~~~~~i~~~vf~~g~~~y~~~ 203 (348)
.-.|.+..+.|++++++|++.-+..|..
T Consensus 53 ~~~~~~~~~w~~~A~~ly~~RP~s~R~~ 80 (103)
T PF11027_consen 53 NSMFMMMMLWMVLAMALYLLRPSSLRSR 80 (103)
T ss_pred ccHHHHHHHHHHHHHHHHHcCchhhcCC
Confidence 4457777888889999888877666655
No 267
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=22.79 E-value=3.3e+02 Score=20.33 Aligned_cols=30 Identities=7% Similarity=0.177 Sum_probs=22.4
Q ss_pred chHHHHHHHHHHHHHHHHHhhhHHHHHhhh
Q 048319 29 SVVHAAGIVNIFSGLVLVLQLPMQYLVDTI 58 (348)
Q Consensus 29 ~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~ 58 (348)
++..|..+.........+...+-||+.+.+
T Consensus 5 gQ~~ae~l~~~il~~~~iisfi~Gy~~q~~ 34 (76)
T PF06645_consen 5 GQRLAEKLMQYILIISAIISFIVGYITQSF 34 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666677777777788888888988885
No 268
>PF11744 ALMT: Aluminium activated malate transporter; InterPro: IPR020966 This entry represents an malate transporter which has been is identified as being critical for aluminium tolerance in Arabidopsis thaliana [].; GO: 0010044 response to aluminum ion
Probab=22.29 E-value=7.7e+02 Score=24.71 Aligned_cols=62 Identities=11% Similarity=0.021 Sum_probs=36.7
Q ss_pred hhHHHHHhhhccc-hHHHHHHHHHHhhhhhhhhcccCCccCCCCCCCCCCCCcccccchhHHHHHHHHHHHHhcccCC
Q 048319 49 LPMQYLVDTIISK-YWMLVFSSLAYSVGIGLLTMSTPPVLAGFVGTCSEYKPECIVKGHKILFYAALGLLAFASSSCS 125 (348)
Q Consensus 49 l~gg~lAD~~lGr-~~ti~~~~~i~~~G~~ll~~s~~p~~~~~~~~c~~~~~~c~~~~~~~~~~~~L~liaiG~G~~k 125 (348)
+...+++.. .|. ++.++++..++++|.+.-..--.|.+++ ....+.....|.+.-++.++++
T Consensus 78 ~~~~~la~~-~g~~~~~~~i~~~vFi~~~~atf~r~~P~~k~--------------rydYg~~Vf~LTf~lV~vs~yr 140 (406)
T PF11744_consen 78 FGVSWLASL-SGDPGEPIVIGISVFIIGFIATFVRFIPKIKA--------------RYDYGGLVFILTFCLVAVSGYR 140 (406)
T ss_pred HHHHHHHHh-cCccchhHHHHHHHHHHHHHHHHHHhchhhhh--------------hhhHHHHHHHHHHHhheeecCC
Confidence 444566765 476 8888888888888865544333354432 1234555556665556666554
No 269
>PRK02237 hypothetical protein; Provisional
Probab=22.09 E-value=3.7e+02 Score=21.76 Aligned_cols=50 Identities=12% Similarity=0.168 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 31 VHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 31 ~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
+.++-++.+|.|.-...+++.+|..|.. -.-+-=++|..+..+|..++..
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~-~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGV-RPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCc-CCChhHHHhHHHHHHhHHHhee
Confidence 6689999999999999999999999995 5555566777888888766544
No 270
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.43 E-value=2.6e+02 Score=22.53 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=43.6
Q ss_pred CchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhc
Q 048319 28 ISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTM 81 (348)
Q Consensus 28 ~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~ 81 (348)
+.++.++-++.+|.|.-..++++.+|..|.. -.-+.=++|..+..+|..++..
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 3448889999999999999999999999995 6666667788888888776654
No 271
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=20.48 E-value=8.7e+02 Score=24.32 Aligned_cols=53 Identities=9% Similarity=0.007 Sum_probs=34.9
Q ss_pred hCCchHHHHHHHHHHHHHHHHHhhhHHHHHhhhccchHHHHHHHHHHhhhhhhhhcc
Q 048319 26 WKISVVHAAGIVNIFSGLVLVLQLPMQYLVDTIISKYWMLVFSSLAYSVGIGLLTMS 82 (348)
Q Consensus 26 l~~~~~~A~~i~~~~~~~~~~~pl~gg~lAD~~lGr~~ti~~~~~i~~~G~~ll~~s 82 (348)
+|-+......+...+..-.+. .++..-|+. ||+.....+.++..+|++.....
T Consensus 348 lg~~~~~~~~~~~~~~~p~~~---~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~ 400 (521)
T KOG0255|consen 348 LGGNIYLNFTLSGLVELPAYF---RNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWL 400 (521)
T ss_pred cCchHHHHHHHHHHHHhhHHH---HHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHh
Confidence 444444443333332222222 346778884 99999999999999998888775
Done!